AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280009111.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280009111.01.T01 MTR_2g054880 93.095 391 10 1 1 391 1 374 0.0 757
MsG0280009111.01.T01 MTR_1g113940 36.478 318 160 10 18 324 3 289 6.46e-53 179
MsG0280009111.01.T01 MTR_4g119900 35.928 334 160 8 26 350 142 430 7.33e-52 181
MsG0280009111.01.T01 MTR_4g119900 35.928 334 160 8 26 350 142 430 8.04e-52 181
MsG0280009111.01.T01 MTR_2g436780 35.030 334 163 8 26 350 144 432 1.80e-50 177
MsG0280009111.01.T01 MTR_2g436780 35.030 334 163 8 26 350 144 432 1.92e-50 177
MsG0280009111.01.T01 MTR_6g091770 31.507 365 200 10 26 389 65 380 5.81e-48 167
MsG0280009111.01.T01 MTR_3g013960 31.831 355 167 13 25 348 255 565 1.98e-37 143
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280009111.01.T01 AT1G04870 69.333 375 98 1 17 391 26 383 0.0 564
MsG0280009111.01.T01 AT1G04870 64.310 297 89 1 95 391 1 280 1.40e-147 419
MsG0280009111.01.T01 AT3G20020 34.840 376 174 8 26 369 83 419 4.47e-60 201
MsG0280009111.01.T01 AT3G20020 34.840 376 174 8 26 369 83 419 5.08e-60 201
MsG0280009111.01.T01 AT3G06930 34.463 354 189 11 2 350 121 436 1.88e-51 180
MsG0280009111.01.T01 AT3G06930 34.463 354 189 11 2 350 121 436 2.30e-51 180
MsG0280009111.01.T01 AT4G29510 32.493 357 194 8 26 381 72 382 1.34e-50 174
MsG0280009111.01.T01 AT3G20020 32.447 376 161 9 26 369 83 397 2.70e-50 174
MsG0280009111.01.T01 AT2G19670 32.000 350 183 9 26 370 48 347 1.40e-49 171
MsG0280009111.01.T01 AT5G49020 35.583 326 172 10 26 350 149 437 2.36e-49 174
MsG0280009111.01.T01 AT5G49020 35.583 326 172 10 26 350 151 439 2.42e-49 174
MsG0280009111.01.T01 AT3G12270 33.236 343 173 11 25 352 244 545 2.31e-40 151

Find 151 sgRNAs with CRISPR-Local

Find 482 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAAGGGAGGGGAGGGCTTT+GGG 0.148487 2:-45531065 MsG0280009111.01.T01:CDS
TAATCCTACAATAAGGTTTC+AGG 0.177563 2:+45528930 None:intergenic
ATCGAACTGTACGGTTATTA+AGG 0.177944 2:-45529263 MsG0280009111.01.T01:three_prime_UTR
GGGAAGGGAGGGGAGGGCTT+TGG 0.181505 2:-45531066 MsG0280009111.01.T01:CDS
TTAGGCTTTGTTTGGGAGTT+TGG 0.214238 2:-45531091 MsG0280009111.01.T01:intron
ATCTCACTTTAGGCTTTGTT+TGG 0.237491 2:-45531099 MsG0280009111.01.T01:intron
GAAGGGAGGGGAGGGCTTTG+GGG 0.247630 2:-45531064 MsG0280009111.01.T01:CDS
GAAATTTGTGTAGGTTGTTT+TGG 0.274614 2:-45535181 MsG0280009111.01.T01:intron
TGTACAACAGTTATTTCTTT+TGG 0.275267 2:-45528957 MsG0280009111.01.T01:three_prime_UTR
GGTGGTTTGATGTACATTTC+CGG 0.276872 2:-45530313 MsG0280009111.01.T01:CDS
ATTAGCGTAGTCGACTTCTT+TGG 0.288507 2:+45535386 None:intergenic
TTCTACTATCCCAGTCCTAA+TGG 0.297541 2:+45533202 None:intergenic
TTAGCGTAGTCGACTTCTTT+GGG 0.302924 2:+45535387 None:intergenic
AAGGGAGGGGAGGGCTTTGG+GGG 0.317775 2:-45531063 MsG0280009111.01.T01:CDS
TTTGGAGGGGAAGGGAGGGG+AGG 0.342513 2:-45531073 MsG0280009111.01.T01:CDS
TCTACTCTAATCCTACAATA+AGG 0.346144 2:+45528923 None:intergenic
GATGAAACAAAAGCCTTCTA+TGG 0.355790 2:-45533128 MsG0280009111.01.T01:CDS
ACTTGGTTCTTCCGATCATT+TGG 0.357148 2:-45529186 MsG0280009111.01.T01:three_prime_UTR
AACACAAAACTGTGTGGATA+TGG 0.358771 2:-45530338 MsG0280009111.01.T01:CDS
CAACCCTGAAACCTTATTGT+AGG 0.361894 2:-45528934 MsG0280009111.01.T01:three_prime_UTR
GTTTGGGAGTTTGGAGGGGA+AGG 0.362008 2:-45531082 MsG0280009111.01.T01:CDS
GGGAGTTTGGAGGGGAAGGG+AGG 0.370970 2:-45531078 MsG0280009111.01.T01:CDS
GAAGGGAAACCATCGTTTAA+TGG 0.372426 2:-45529730 MsG0280009111.01.T01:CDS
GTGGTTTGATGTACATTTCC+GGG 0.373727 2:-45530312 MsG0280009111.01.T01:intron
TTGAAATTTGCAAGATATGA+TGG 0.376537 2:-45528836 MsG0280009111.01.T01:three_prime_UTR
GACCGCTGGCTCAAACCAAC+AGG 0.380824 2:-45534233 MsG0280009111.01.T01:CDS
TCGAACTGTACGGTTATTAA+GGG 0.392893 2:-45529262 MsG0280009111.01.T01:three_prime_UTR
GCACCGTTAAAGAGGATAGT+AGG 0.395495 2:+45528886 None:intergenic
GAGTTTGGAGGGGAAGGGAG+GGG 0.396492 2:-45531076 MsG0280009111.01.T01:CDS
TTGGATGTTGGTGCTGGAAG+TGG 0.397747 2:-45535162 MsG0280009111.01.T01:CDS
GCTTTGTTTGGGAGTTTGGA+GGG 0.401401 2:-45531087 MsG0280009111.01.T01:CDS
GGCTTTGTTTGGGAGTTTGG+AGG 0.401752 2:-45531088 MsG0280009111.01.T01:CDS
AACGCCGCCGGTGGTGGCCG+AGG 0.402656 2:-45535420 MsG0280009111.01.T01:CDS
CTGTGAGATTCAAAAGCATT+CGG 0.404202 2:-45529694 MsG0280009111.01.T01:CDS
GCTCATATCAACACCATAGA+AGG 0.404592 2:+45533115 None:intergenic
ACAAGCTTTGCTTGAAAGTC+GGG 0.412753 2:+45529081 None:intergenic
TCCGAAAACGCCGCCGGTGG+TGG 0.416415 2:-45535426 MsG0280009111.01.T01:CDS
TTGGAGGGGAAGGGAGGGGA+GGG 0.418688 2:-45531072 MsG0280009111.01.T01:CDS
TCTCACTTTAGGCTTTGTTT+GGG 0.420962 2:-45531098 MsG0280009111.01.T01:intron
ATTTATTGATTATTTAATTG+TGG 0.425146 2:-45529009 MsG0280009111.01.T01:three_prime_UTR
TACCCTACTATCCTCTTTAA+CGG 0.429025 2:-45528889 MsG0280009111.01.T01:three_prime_UTR
CAGGTTGTTGAGGTTATTGA+GGG 0.437694 2:-45535030 MsG0280009111.01.T01:CDS
CGTTTAATGGAGGTTGAGCT+TGG 0.443414 2:-45529717 MsG0280009111.01.T01:CDS
CTTCATCCACATCAAGTCAT+AGG 0.443890 2:-45530458 MsG0280009111.01.T01:CDS
TTTGGGAGTTTGGAGGGGAA+GGG 0.447749 2:-45531081 MsG0280009111.01.T01:CDS
AATCCTACAATAAGGTTTCA+GGG 0.448390 2:+45528931 None:intergenic
TCTACTATCCCAGTCCTAAT+GGG 0.449075 2:+45533203 None:intergenic
GGCGGTGCCTCGGCCACCAC+CGG 0.450973 2:+45535413 None:intergenic
TGGATGTTGGTGCTGGAAGT+GGG 0.452123 2:-45535161 MsG0280009111.01.T01:CDS
GAAGTGGGATTCTTGCTATA+TGG 0.455599 2:-45535146 MsG0280009111.01.T01:CDS
GCATGTGGATGGCACCCATT+AGG 0.455721 2:-45533217 MsG0280009111.01.T01:CDS
GGAGTTTGGAGGGGAAGGGA+GGG 0.456243 2:-45531077 MsG0280009111.01.T01:CDS
CATACAAACAAACCTTTCTC+AGG 0.456902 2:+45534985 None:intergenic
AGGGAGGGGAGGGCTTTGGG+GGG 0.457839 2:-45531062 MsG0280009111.01.T01:intron
GCAGGTTGTTGAGGTTATTG+AGG 0.459237 2:-45535031 MsG0280009111.01.T01:CDS
GATGTTACATTGCCTGAGAA+AGG 0.461263 2:-45534997 MsG0280009111.01.T01:intron
AACTCAATCTCATGTTCAGC+TGG 0.461498 2:+45530196 None:intergenic
TTCCTCTGCTCCTCAGCAAA+AGG 0.461816 2:+45533080 None:intergenic
GTCAGGATTGGTTTGGCGGT+AGG 0.462470 2:+45535507 None:intergenic
ACTATCCTCTTTAACGGTGC+AGG 0.462692 2:-45528883 MsG0280009111.01.T01:three_prime_UTR
CTTTGTTTGGGAGTTTGGAG+GGG 0.464748 2:-45531086 MsG0280009111.01.T01:CDS
TCATATGTGCTCGTGACCGC+TGG 0.468854 2:-45534247 MsG0280009111.01.T01:CDS
TAAAACCTGCACCGTTAAAG+AGG 0.472216 2:+45528878 None:intergenic
TGTGAGATTCAAAAGCATTC+GGG 0.473426 2:-45529693 MsG0280009111.01.T01:CDS
CTTTGGGGACGGCGGTGCCT+CGG 0.475277 2:+45535403 None:intergenic
TTTATTGATTATTTAATTGT+GGG 0.477910 2:-45529008 MsG0280009111.01.T01:three_prime_UTR
GGGCGATTACCAGTCAGCTA+TGG 0.480043 2:-45533171 MsG0280009111.01.T01:CDS
AGCTCAAGCAGGTGCAAAGA+AGG 0.480270 2:-45535121 MsG0280009111.01.T01:CDS
CTGTACACACTGGGGTCAGC+AGG 0.481201 2:-45530149 MsG0280009111.01.T01:intron
TTAGGTCAGGATTGGTTTGG+CGG 0.494154 2:+45535503 None:intergenic
TACAAGCTTTGCTTGAAAGT+CGG 0.495762 2:+45529080 None:intergenic
CAGCATTATTCAGTGATGGT+TGG 0.501524 2:-45529128 MsG0280009111.01.T01:three_prime_UTR
TGGGATAGTAGAACAAAAGT+TGG 0.503612 2:-45533192 MsG0280009111.01.T01:CDS
ACCAGTCAGCTATGGGCGAT+TGG 0.509747 2:-45533163 MsG0280009111.01.T01:CDS
CATCAAGTCATAGGAACTGC+TGG 0.510644 2:-45530449 MsG0280009111.01.T01:CDS
CCCCTGTTGGTTTGAGCCAG+CGG 0.514302 2:+45534231 None:intergenic
GGTTATTGAGGGTTCTGTTG+AGG 0.518633 2:-45535019 MsG0280009111.01.T01:CDS
GTGTGACATGTGACTCATAA+GGG 0.519310 2:-45529159 MsG0280009111.01.T01:three_prime_UTR
GCAGAGGAAATACTATCTAC+AGG 0.521867 2:-45533066 MsG0280009111.01.T01:CDS
TGGATGGCACCCATTAGGAC+TGG 0.527259 2:-45533212 MsG0280009111.01.T01:CDS
TGTTATCATCTCTGAATGGA+TGG 0.530239 2:-45534306 MsG0280009111.01.T01:CDS
TGAAATTTGCAAGATATGAT+GGG 0.530937 2:-45528835 MsG0280009111.01.T01:three_prime_UTR
GGCGATTACCAGTCAGCTAT+GGG 0.531624 2:-45533170 MsG0280009111.01.T01:CDS
TACTAACCTTGTCTTTAAAG+TGG 0.532555 2:+45535265 None:intergenic
TGTTTACAGAAGAAAGCAGT+TGG 0.534384 2:-45529222 MsG0280009111.01.T01:three_prime_UTR
GCCAATCGCCCATAGCTGAC+TGG 0.534934 2:+45533162 None:intergenic
GCTCTCAGATCGTGTTCGTA+TGG 0.535538 2:-45535322 MsG0280009111.01.T01:CDS
AATACTTACATCACCCCTGT+TGG 0.538492 2:+45534218 None:intergenic
TGTTCAGCATTATTCAGTGA+TGG 0.540471 2:-45529132 MsG0280009111.01.T01:three_prime_UTR
TTTCTAATGAGTCGCTCGAA+GGG 0.540973 2:-45529747 MsG0280009111.01.T01:CDS
TAATCTTGAGCAGGTTGTTG+AGG 0.544159 2:-45535040 MsG0280009111.01.T01:CDS
TTCAATCTTATCGAACTGTA+CGG 0.544210 2:-45529272 MsG0280009111.01.T01:three_prime_UTR
AGGAACTGCTGGTCTAGTAA+AGG 0.544394 2:-45530438 MsG0280009111.01.T01:CDS
GAAATCGAATAATCTTGAGC+AGG 0.548053 2:-45535049 MsG0280009111.01.T01:CDS
GCTATATGGTCAGCTCAAGC+AGG 0.548853 2:-45535132 MsG0280009111.01.T01:CDS
GGGATAGTAGAACAAAAGTT+GGG 0.555999 2:-45533191 MsG0280009111.01.T01:CDS
TGTGTGACATGTGACTCATA+AGG 0.556044 2:-45529160 MsG0280009111.01.T01:three_prime_UTR
CCATCACTCACATGTGTAGG+AGG 0.557201 2:+45529789 None:intergenic
AATAACTGTTGTACAATGGA+AGG 0.559071 2:+45528965 None:intergenic
GTTAAAGAGGATAGTAGGGT+AGG 0.565436 2:+45528891 None:intergenic
AGTTTAGATTCCTTTGTTCG+CGG 0.567958 2:-45529626 MsG0280009111.01.T01:three_prime_UTR
TAGTCATGCTCGCATGTGGA+TGG 0.569852 2:-45533228 MsG0280009111.01.T01:CDS
CACCGTTAAAGAGGATAGTA+GGG 0.571415 2:+45528887 None:intergenic
TTGGTGATAGAGAAAGGAGT+AGG 0.571481 2:+45535353 None:intergenic
AAGAAATAACTGTTGTACAA+TGG 0.572673 2:+45528961 None:intergenic
ATCCACATGCGAGCATGACT+AGG 0.578485 2:+45533230 None:intergenic
GGATGGCACCCATTAGGACT+GGG 0.582000 2:-45533211 MsG0280009111.01.T01:CDS
TAGCGTAGTCGACTTCTTTG+GGG 0.583467 2:+45535388 None:intergenic
TGGTTGGATAAACCTCGTAT+TGG 0.584299 2:-45529112 MsG0280009111.01.T01:three_prime_UTR
GGTGCCTCGGCCACCACCGG+CGG 0.585507 2:+45535416 None:intergenic
ATCCTAGTCATGCTCGCATG+TGG 0.586013 2:-45533232 MsG0280009111.01.T01:CDS
TGCTTACCAGGGACGAAGTG+AGG 0.588452 2:-45530221 MsG0280009111.01.T01:intron
GTCACACAAAACCAAATGAT+CGG 0.588979 2:+45529175 None:intergenic
TGTAGATTACTGTACACACT+GGG 0.591513 2:-45530158 MsG0280009111.01.T01:CDS
TTAAAGAGGATAGTAGGGTA+GGG 0.591600 2:+45528892 None:intergenic
GCTTGAAGCTCCGCGAACAA+AGG 0.592466 2:+45529616 None:intergenic
AATTTCTGTAGACGTCGTTG+TGG 0.596251 2:-45530487 MsG0280009111.01.T01:intron
ACTTCTTCCGAAAACGCCGC+CGG 0.596388 2:-45535432 MsG0280009111.01.T01:CDS
TCTTCCGAAAACGCCGCCGG+TGG 0.601011 2:-45535429 MsG0280009111.01.T01:CDS
CAAACACCACTTTAAAGACA+AGG 0.601109 2:-45535271 MsG0280009111.01.T01:intron
TTGATGTTATCATCTCTGAA+TGG 0.604535 2:-45534310 MsG0280009111.01.T01:CDS
TGCCACAGTGGCAGACATAG+AGG 0.605748 2:-45530399 MsG0280009111.01.T01:CDS
GTGTAGATTACTGTACACAC+TGG 0.606301 2:-45530159 MsG0280009111.01.T01:CDS
TCACCATCACTCACATGTGT+AGG 0.616419 2:+45529786 None:intergenic
GTAGTCGACTTCTTTGGGGA+CGG 0.618495 2:+45535392 None:intergenic
GGTTCTTACTCACTCAGCGG+TGG 0.619536 2:+45535461 None:intergenic
ACCGCTGGCTCAAACCAACA+GGG 0.622592 2:-45534232 MsG0280009111.01.T01:CDS
TGTTGAAGCTACTAAGATGT+CGG 0.627273 2:-45535091 MsG0280009111.01.T01:CDS
TTCCTCTATGTCTGCCACTG+TGG 0.627982 2:+45530397 None:intergenic
CATGTGTAGGAGGATTTAAG+AGG 0.628125 2:+45529799 None:intergenic
ACAAAACTGTGTGGATATGG+AGG 0.629006 2:-45530335 MsG0280009111.01.T01:CDS
GGGAAACCATCGTTTAATGG+AGG 0.633476 2:-45529727 MsG0280009111.01.T01:CDS
GTCGACTTCTTTGGGGACGG+CGG 0.634616 2:+45535395 None:intergenic
GCTGAGTGAGTAAGAACCAT+GGG 0.636916 2:-45535456 MsG0280009111.01.T01:exon
TGTGTACAGTAATCTACACT+AGG 0.645957 2:+45530163 None:intergenic
GCAGTTCCTATGACTTGATG+TGG 0.646015 2:+45530452 None:intergenic
CGCTGAGTGAGTAAGAACCA+TGG 0.649117 2:-45535457 MsG0280009111.01.T01:exon
GTAATCTACACTAGGAGCGG+TGG 0.661333 2:+45530171 None:intergenic
TGGTGTTGATATGAGCACTT+TGG 0.661843 2:-45533108 MsG0280009111.01.T01:CDS
GTTATCATCTCTGAATGGAT+GGG 0.664829 2:-45534305 MsG0280009111.01.T01:CDS
GAGCTTCAAGCAGTATCCCA+CGG 0.678692 2:-45529604 MsG0280009111.01.T01:intron
GCTCAACCTCCATTAAACGA+TGG 0.680084 2:+45529721 None:intergenic
CCTCCTACACATGTGAGTGA+TGG 0.685198 2:-45529789 MsG0280009111.01.T01:CDS
CCGCTGGCTCAAACCAACAG+GGG 0.695198 2:-45534231 MsG0280009111.01.T01:CDS
CATGGTTCTTACTCACTCAG+CGG 0.701342 2:+45535458 None:intergenic
ACAGTAATCTACACTAGGAG+CGG 0.702438 2:+45530168 None:intergenic
ACAGAGAACACAAAACTGTG+TGG 0.712011 2:-45530344 MsG0280009111.01.T01:CDS
AACTGTGTGGATATGGAGGG+TGG 0.718749 2:-45530331 MsG0280009111.01.T01:CDS
CAAAACTGTGTGGATATGGA+GGG 0.725863 2:-45530334 MsG0280009111.01.T01:CDS
TGACTGTTTGACTGCCACAG+TGG 0.774647 2:-45530411 MsG0280009111.01.T01:CDS
GTAGATTACTGTACACACTG+GGG 0.847696 2:-45530157 MsG0280009111.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTATGAATATTTCAAAA+AGG - Chr2:45529456-45529475 MsG0280009111.01.T01:intron 10.0%
!!! AGTTTTATCATTAAATAAAA+AGG + Chr2:45531881-45531900 None:intergenic 10.0%
!!! ATTTATTGATTATTTAATTG+TGG - Chr2:45535280-45535299 MsG0280009111.01.T01:CDS 10.0%
!!! TAAGAAAATATTATTTTTTC+GGG - Chr2:45529629-45529648 MsG0280009111.01.T01:three_prime_UTR 10.0%
!!! TTTATTGATTATTTAATTGT+GGG - Chr2:45535281-45535300 MsG0280009111.01.T01:CDS 10.0%
!! AACATTTAACAATTCATATA+AGG + Chr2:45529896-45529915 None:intergenic 15.0%
!! AATATAATAACAACATAGAT+TGG - Chr2:45533356-45533375 MsG0280009111.01.T01:intron 15.0%
!! TATACTATATATGAAAAATG+TGG - Chr2:45530234-45530253 MsG0280009111.01.T01:intron 15.0%
!! TTACACATAATAAAAACTAA+AGG + Chr2:45532108-45532127 None:intergenic 15.0%
!! TTATATGAATTGTTAAATGT+TGG - Chr2:45529895-45529914 MsG0280009111.01.T01:intron 15.0%
!! TTATTAAGTGGTTAATTATA+GGG - Chr2:45529542-45529561 MsG0280009111.01.T01:intron 15.0%
!!! AGAAAATAATTATTAGCTTA+TGG + Chr2:45530587-45530606 None:intergenic 15.0%
!!! ATATAGTACTTATTTTTGAA+AGG + Chr2:45534635-45534654 None:intergenic 15.0%
!! AAACAAAAACATTTCCTATT+AGG - Chr2:45532374-45532393 MsG0280009111.01.T01:intron 20.0%
!! AACAATGAAAATGAGAAAAA+AGG + Chr2:45535482-45535501 None:intergenic 20.0%
!! AATATTACAATAGATAACTG+AGG - Chr2:45534862-45534881 MsG0280009111.01.T01:intron 20.0%
!! AGCAATTTGAATATTAATGA+AGG - Chr2:45534230-45534249 MsG0280009111.01.T01:CDS 20.0%
!! ATTATTCAATAACCTGAAAA+AGG - Chr2:45529697-45529716 MsG0280009111.01.T01:CDS 20.0%
!! GTTATTAAGTGGTTAATTAT+AGG - Chr2:45529541-45529560 MsG0280009111.01.T01:intron 20.0%
!! GTTGGAAATATATAGAAAAA+TGG - Chr2:45533249-45533268 MsG0280009111.01.T01:intron 20.0%
!! TATTGAATAATTGATGTATC+TGG + Chr2:45529688-45529707 None:intergenic 20.0%
!! TATTGATAAGAAATTTGTGT+AGG - Chr2:45529099-45529118 MsG0280009111.01.T01:three_prime_UTR 20.0%
!! TTAACCACAAATTATCAATT+TGG + Chr2:45529569-45529588 None:intergenic 20.0%
!!! AAAGAACAATTTTTTAGAGA+AGG - Chr2:45533293-45533312 MsG0280009111.01.T01:intron 20.0%
!!! AAGACATTTTTTTAATACTG+AGG - Chr2:45534830-45534849 MsG0280009111.01.T01:intron 20.0%
!!! AGACATTTTTTTAATACTGA+GGG - Chr2:45534831-45534850 MsG0280009111.01.T01:intron 20.0%
!!! ATAGGAAATGTTTTTGTTTT+AGG + Chr2:45532373-45532392 None:intergenic 20.0%
!!! ATTGATTTTCTTTTTTGAAC+AGG - Chr2:45534976-45534995 MsG0280009111.01.T01:intron 20.0%
!!! ATTTTTACATTGACTTAACA+TGG - Chr2:45530832-45530851 MsG0280009111.01.T01:intron 20.0%
!!! GTTACATAGAATTTTTGTTA+TGG - Chr2:45531290-45531309 MsG0280009111.01.T01:intron 20.0%
!!! TAAGGTTTTGAATTAAATCT+CGG - Chr2:45529353-45529372 MsG0280009111.01.T01:intron 20.0%
!!! TAGTGTAATGTTTTAATCAT+TGG - Chr2:45534458-45534477 MsG0280009111.01.T01:intron 20.0%
!!! TATTTTCTTATAATAGTGAC+CGG + Chr2:45529619-45529638 None:intergenic 20.0%
!!! TCAGTTTTACTATTCTAAAA+AGG + Chr2:45531934-45531953 None:intergenic 20.0%
!!! TTATATGATCTTCAACATTT+TGG + Chr2:45532503-45532522 None:intergenic 20.0%
!!! TTTATTTTGAGAAGGAAATA+GGG - Chr2:45535430-45535449 MsG0280009111.01.T01:CDS 20.0%
!!! TTTTATTTTGAGAAGGAAAT+AGG - Chr2:45535429-45535448 MsG0280009111.01.T01:CDS 20.0%
! AAAAACTAAAGGAGATATGT+CGG + Chr2:45532097-45532116 None:intergenic 25.0%
! AAATCCACTTACATATTGAA+AGG + Chr2:45531996-45532015 None:intergenic 25.0%
! AAGAAATAACTGTTGTACAA+TGG + Chr2:45535331-45535350 None:intergenic 25.0%
! AAGGAATATTTGCTTATACT+AGG - Chr2:45529716-45529735 MsG0280009111.01.T01:CDS 25.0%
! AAGTCAATGTAAAAATAGCA+TGG + Chr2:45530828-45530847 None:intergenic 25.0%
! ACATTGTCAGAATTGAAAAA+GGG + Chr2:45534380-45534399 None:intergenic 25.0%
! ACTCTATTATATAGTCAAGA+TGG + Chr2:45529744-45529763 None:intergenic 25.0%
! AGAATAGAACAGCTAATTTA+TGG + Chr2:45534280-45534299 None:intergenic 25.0%
! AGGAATATTTGCTTATACTA+GGG - Chr2:45529717-45529736 MsG0280009111.01.T01:CDS 25.0%
! ATAAAAAAATTCCCCTCATT+TGG + Chr2:45533451-45533470 None:intergenic 25.0%
! ATACAATTGAACTAGAATGA+AGG + Chr2:45534430-45534449 None:intergenic 25.0%
! ATATAAACACCAACACTTTA+AGG + Chr2:45529950-45529969 None:intergenic 25.0%
! ATTACCTATTTGAGAGTTTA+GGG - Chr2:45529793-45529812 MsG0280009111.01.T01:CDS 25.0%
! ATTATCATGTAAAACTAGAG+AGG + Chr2:45530780-45530799 None:intergenic 25.0%
! CATTGAATAACTTATGTATC+TGG - Chr2:45529654-45529673 MsG0280009111.01.T01:CDS 25.0%
! TAAAAAAATTCCCCTCATTT+GGG + Chr2:45533450-45533469 None:intergenic 25.0%
! TAATCAGTATTGTTAAGTAG+TGG - Chr2:45530371-45530390 MsG0280009111.01.T01:CDS 25.0%
! TAATTTATGGAACTCATTGA+AGG + Chr2:45534267-45534286 None:intergenic 25.0%
! TACATTGTCAGAATTGAAAA+AGG + Chr2:45534381-45534400 None:intergenic 25.0%
! TATATATATCGCCAATGAAT+TGG + Chr2:45532339-45532358 None:intergenic 25.0%
! TCATACTTTCTGTGATAATT+TGG - Chr2:45534354-45534373 MsG0280009111.01.T01:intron 25.0%
! TGAAATTTGCAAGATATGAT+GGG - Chr2:45535454-45535473 MsG0280009111.01.T01:exon 25.0%
! TGTTGTTAATTGCAGAAATA+CGG + Chr2:45530510-45530529 None:intergenic 25.0%
! TTAAAGAACATTCAAATGGA+AGG + Chr2:45534781-45534800 None:intergenic 25.0%
! TTCATTAGTGATACTTCAAT+GGG - Chr2:45533639-45533658 MsG0280009111.01.T01:intron 25.0%
! TTGAAATTTGCAAGATATGA+TGG - Chr2:45535453-45535472 MsG0280009111.01.T01:exon 25.0%
! TTTGTTAATGAGCAAATCTT+TGG - Chr2:45530982-45531001 MsG0280009111.01.T01:intron 25.0%
!! ACCAGAAAATAGATAGTTTT+AGG - Chr2:45531850-45531869 MsG0280009111.01.T01:intron 25.0%
!! GTTTTATGACTTTTATCTAC+AGG - Chr2:45533610-45533629 MsG0280009111.01.T01:intron 25.0%
!! TAAGCAAATATTCCTTTTTC+AGG + Chr2:45529712-45529731 None:intergenic 25.0%
!!! AAAACCTCTTCTTTTGTTTA+TGG + Chr2:45530106-45530125 None:intergenic 25.0%
!!! AAACCTCTTCTTTTGTTTAT+GGG + Chr2:45530105-45530124 None:intergenic 25.0%
!!! AATGATTTGGTAAACTATGA+AGG - Chr2:45530915-45530934 MsG0280009111.01.T01:intron 25.0%
!!! AGTGGAAAAAAGAGTTTTAA+AGG + Chr2:45532133-45532152 None:intergenic 25.0%
!!! ATTGTTAGGTTTTATAGTTG+AGG + Chr2:45534889-45534908 None:intergenic 25.0%
!!! ATTTTCTTTTTTGAACAGGA+AGG - Chr2:45534980-45534999 MsG0280009111.01.T01:intron 25.0%
!!! CCAGAAAATAGATAGTTTTA+GGG - Chr2:45531851-45531870 MsG0280009111.01.T01:intron 25.0%
!!! CTTTAGTTTTCAATAGAACA+GGG - Chr2:45530347-45530366 MsG0280009111.01.T01:CDS 25.0%
!!! GATTCAGATTTGTTAACATT+AGG + Chr2:45530737-45530756 None:intergenic 25.0%
!!! TAATGTTTTAATCATTGGAC+AGG - Chr2:45534463-45534482 MsG0280009111.01.T01:intron 25.0%
!!! TACTTCTAGTTTAAGTTGTA+AGG - Chr2:45529335-45529354 MsG0280009111.01.T01:intron 25.0%
!!! TCTTTAGTTTTCAATAGAAC+AGG - Chr2:45530346-45530365 MsG0280009111.01.T01:CDS 25.0%
!!! TGTACAACAGTTATTTCTTT+TGG - Chr2:45535332-45535351 MsG0280009111.01.T01:CDS 25.0%
AAAAAAATTCCCCTCATTTG+GGG + Chr2:45533449-45533468 None:intergenic 30.0%
AAACCAAAATGAATTCCATG+TGG + Chr2:45531401-45531420 None:intergenic 30.0%
AACCAAAATGAATTCCATGT+GGG + Chr2:45531400-45531419 None:intergenic 30.0%
AACTACAAATCACACCATTA+AGG + Chr2:45533593-45533612 None:intergenic 30.0%
AACTTAATTGATACTTCCTC+CGG - Chr2:45529597-45529616 MsG0280009111.01.T01:intron 30.0%
AATAACTGTTGTACAATGGA+AGG + Chr2:45535327-45535346 None:intergenic 30.0%
AATATTAATGAAGGAGCTGA+TGG - Chr2:45534239-45534258 MsG0280009111.01.T01:CDS 30.0%
AATCCTACAATAAGGTTTCA+GGG + Chr2:45535361-45535380 None:intergenic 30.0%
ACAATGAAAAGGCTATAAGA+CGG + Chr2:45531577-45531596 None:intergenic 30.0%
ACTGACATGTATCAATGATT+TGG - Chr2:45530902-45530921 MsG0280009111.01.T01:intron 30.0%
ACTGTAACACTGTTGTATTA+CGG - Chr2:45530455-45530474 MsG0280009111.01.T01:CDS 30.0%
ATGGTATTTGACGAAATCAA+TGG + Chr2:45529408-45529427 None:intergenic 30.0%
ATGTTGATGTTCTTGTTCTT+GGG + Chr2:45531473-45531492 None:intergenic 30.0%
CAAAAACATTTCCTATTAGG+TGG - Chr2:45532377-45532396 MsG0280009111.01.T01:intron 30.0%
CCATTTGAATGTTCTTTAAC+AGG - Chr2:45534782-45534801 MsG0280009111.01.T01:intron 30.0%
CCTGTTAAAGAACATTCAAA+TGG + Chr2:45534785-45534804 None:intergenic 30.0%
CTGACCTAAAAACATAAACT+TGG - Chr2:45528800-45528819 MsG0280009111.01.T01:three_prime_UTR 30.0%
CTTCATTAGTGATACTTCAA+TGG - Chr2:45533638-45533657 MsG0280009111.01.T01:intron 30.0%
GAACTCAAAAATTGTATTGG+GGG + Chr2:45533426-45533445 None:intergenic 30.0%
GATTACCTATTTGAGAGTTT+AGG - Chr2:45529792-45529811 MsG0280009111.01.T01:CDS 30.0%
GGAACTCAAAAATTGTATTG+GGG + Chr2:45533427-45533446 None:intergenic 30.0%
GGGAACTCAAAAATTGTATT+GGG + Chr2:45533428-45533447 None:intergenic 30.0%
GTTATAGCACTAATGCTTAA+GGG - Chr2:45531725-45531744 MsG0280009111.01.T01:intron 30.0%
TAAACCCTAAACTCTCAAAT+AGG + Chr2:45529800-45529819 None:intergenic 30.0%
TAATCCTACAATAAGGTTTC+AGG + Chr2:45535362-45535381 None:intergenic 30.0%
TCTACTCTAATCCTACAATA+AGG + Chr2:45535369-45535388 None:intergenic 30.0%
TCTGACCAAAAATACAATAG+CGG + Chr2:45531815-45531834 None:intergenic 30.0%
TCTGCTTCATGAAAATGAAA+TGG - Chr2:45530940-45530959 MsG0280009111.01.T01:intron 30.0%
TGAAATCATCAAGAGAAAGT+TGG + Chr2:45533728-45533747 None:intergenic 30.0%
TGGAAGAAATAGAAGACATT+GGG + Chr2:45533509-45533528 None:intergenic 30.0%
TTAGTATCCTTAACTGAACT+GGG - Chr2:45529041-45529060 MsG0280009111.01.T01:three_prime_UTR 30.0%
TTCAATAACAGCAAAAGTCT+AGG - Chr2:45532585-45532604 MsG0280009111.01.T01:intron 30.0%
TTCAATCTTATCGAACTGTA+CGG - Chr2:45535017-45535036 MsG0280009111.01.T01:CDS 30.0%
TTGATGTTATCATCTCTGAA+TGG - Chr2:45529979-45529998 MsG0280009111.01.T01:intron 30.0%
! AATTAGGTTTTTCATGCAAG+TGG + Chr2:45531512-45531531 None:intergenic 30.0%
! CATTGAAGTATCACTAATGA+AGG + Chr2:45533640-45533659 None:intergenic 30.0%
! CCCTAAAACTATCTATTTTC+TGG + Chr2:45531854-45531873 None:intergenic 30.0%
! GAAATTTGTGTAGGTTGTTT+TGG - Chr2:45529108-45529127 MsG0280009111.01.T01:three_prime_UTR 30.0%
! GAATGAAGTACTTCTGAATT+AGG + Chr2:45531528-45531547 None:intergenic 30.0%
! GCAACCAAGTTTATGTTTTT+AGG + Chr2:45528807-45528826 None:intergenic 30.0%
! TACTAACCTTGTCTTTAAAG+TGG + Chr2:45529027-45529046 None:intergenic 30.0%
! TATTTGAGAGTTTAGGGTTT+AGG - Chr2:45529799-45529818 MsG0280009111.01.T01:CDS 30.0%
!! TGTAGAAGTGCTTAATTGTT+AGG + Chr2:45534903-45534922 None:intergenic 30.0%
!! TTCTTTTTGGTGATAGAGAA+AGG + Chr2:45528945-45528964 None:intergenic 30.0%
!!! AACTGCTTTTTTTCGGTTTT+TGG + Chr2:45532829-45532848 None:intergenic 30.0%
!!! ATTTTGGTTTGTTTGTCGTA+CGG - Chr2:45531411-45531430 MsG0280009111.01.T01:intron 30.0%
!!! CAAGTTTATGTTTTTAGGTC+AGG + Chr2:45528802-45528821 None:intergenic 30.0%
!!! TGGGTTGTCTGATTTTTTTT+TGG - Chr2:45535300-45535319 MsG0280009111.01.T01:CDS 30.0%
!!! TGTTCTCAACTGCTTTTTTT+CGG + Chr2:45532836-45532855 None:intergenic 30.0%
!!! TTATGTTTTTAGGTCAGGAT+TGG + Chr2:45528797-45528816 None:intergenic 30.0%
AAAAAATTCCCCTCATTTGG+GGG + Chr2:45533448-45533467 None:intergenic 35.0%
AACACAAAACTGTGTGGATA+TGG - Chr2:45533951-45533970 MsG0280009111.01.T01:intron 35.0%
AACCAAAAATCTGAGCAACA+GGG - Chr2:45532756-45532775 MsG0280009111.01.T01:intron 35.0%
AACCTCAAAAATGCTTTAGC+AGG - Chr2:45532421-45532440 MsG0280009111.01.T01:intron 35.0%
AAGAAATAGAAGACATTGGG+AGG + Chr2:45533506-45533525 None:intergenic 35.0%
AAGCAATTCTGCTGTGTTAT+TGG - Chr2:45533159-45533178 MsG0280009111.01.T01:CDS 35.0%
ACAAGAACATCAACATGTGT+TGG - Chr2:45531477-45531496 MsG0280009111.01.T01:intron 35.0%
ACCAAAATGAATTCCATGTG+GGG + Chr2:45531399-45531418 None:intergenic 35.0%
ACCTTTATAGATGAGAGACA+GGG - Chr2:45534321-45534340 MsG0280009111.01.T01:intron 35.0%
AGTTTAGATTCCTTTGTTCG+CGG - Chr2:45534663-45534682 MsG0280009111.01.T01:intron 35.0%
ATACATGTCAGTATCTCTGT+TGG + Chr2:45530894-45530913 None:intergenic 35.0%
ATACGGATAGCAGAAAAAAG+CGG + Chr2:45530493-45530512 None:intergenic 35.0%
ATCGAACTGTACGGTTATTA+AGG - Chr2:45535026-45535045 MsG0280009111.01.T01:CDS 35.0%
CAATAATGCAACTGTGTAAG+TGG - Chr2:45531665-45531684 MsG0280009111.01.T01:intron 35.0%
CATACAAACAAACCTTTCTC+AGG + Chr2:45529307-45529326 None:intergenic 35.0%
CATGTTGATGTTCTTGTTCT+TGG + Chr2:45531474-45531493 None:intergenic 35.0%
CGAAATAGACAACGTTCTAT+AGG - Chr2:45532312-45532331 MsG0280009111.01.T01:intron 35.0%
CGTTATAGCACTAATGCTTA+AGG - Chr2:45531724-45531743 MsG0280009111.01.T01:intron 35.0%
CTGAGAAAACAAGAAACAAG+TGG - Chr2:45530652-45530671 MsG0280009111.01.T01:intron 35.0%
CTGTTTCCATATCAAGATAG+AGG - Chr2:45533034-45533053 MsG0280009111.01.T01:intron 35.0%
CTTCCCATAAACAAAAGAAG+AGG - Chr2:45530099-45530118 MsG0280009111.01.T01:intron 35.0%
GAAATCGAATAATCTTGAGC+AGG - Chr2:45529240-45529259 MsG0280009111.01.T01:three_prime_UTR 35.0%
GAACATTCAAATGGAAGGAT+AGG + Chr2:45534776-45534795 None:intergenic 35.0%
GATGAAACAAAAGCCTTCTA+TGG - Chr2:45531161-45531180 MsG0280009111.01.T01:intron 35.0%
GCAACCTTTCAATATGTAAG+TGG - Chr2:45531989-45532008 MsG0280009111.01.T01:intron 35.0%
GGGATAGTAGAACAAAAGTT+GGG - Chr2:45531098-45531117 MsG0280009111.01.T01:intron 35.0%
GGGGAACTCAAAAATTGTAT+TGG + Chr2:45533429-45533448 None:intergenic 35.0%
GTAATACAACAGTGTTACAG+TGG + Chr2:45530456-45530475 None:intergenic 35.0%
GTCACACAAAACCAAATGAT+CGG + Chr2:45535117-45535136 None:intergenic 35.0%
GTGGAACAAGGATAGAAATT+AGG + Chr2:45531775-45531794 None:intergenic 35.0%
GTGGAAGAAATAGAAGACAT+TGG + Chr2:45533510-45533529 None:intergenic 35.0%
GTTAATGAGCAAATCTTTGG+TGG - Chr2:45530985-45531004 MsG0280009111.01.T01:intron 35.0%
GTTAGTATCCTTAACTGAAC+TGG - Chr2:45529040-45529059 MsG0280009111.01.T01:three_prime_UTR 35.0%
GTTATCATCTCTGAATGGAT+GGG - Chr2:45529984-45530003 MsG0280009111.01.T01:intron 35.0%
GTTCTATAGGTCCAATTCAT+TGG - Chr2:45532325-45532344 MsG0280009111.01.T01:intron 35.0%
TACAAGCTTTGCTTGAAAGT+CGG + Chr2:45535212-45535231 None:intergenic 35.0%
TACCCTACTATCCTCTTTAA+CGG - Chr2:45535400-45535419 MsG0280009111.01.T01:CDS 35.0%
TACCTTTATAGATGAGAGAC+AGG - Chr2:45534320-45534339 MsG0280009111.01.T01:intron 35.0%
TATCAAGATAGAGGTTGCAA+TGG - Chr2:45533043-45533062 MsG0280009111.01.T01:intron 35.0%
TCAAAAATTGTATTGGGGGA+GGG + Chr2:45533422-45533441 None:intergenic 35.0%
TCATGATTGCATGGAAGAAA+GGG + Chr2:45531628-45531647 None:intergenic 35.0%
TCGAACTGTACGGTTATTAA+GGG - Chr2:45535027-45535046 MsG0280009111.01.T01:CDS 35.0%
TCTGAACTTGGTTTATGAGT+GGG + Chr2:45531552-45531571 None:intergenic 35.0%
TGGGATAGTAGAACAAAAGT+TGG - Chr2:45531097-45531116 MsG0280009111.01.T01:intron 35.0%
TGTAGATTACTGTACACACT+GGG - Chr2:45534131-45534150 MsG0280009111.01.T01:intron 35.0%
TGTCTATTTCGCCAATGAAT+TGG + Chr2:45532303-45532322 None:intergenic 35.0%
TGTGTACAGTAATCTACACT+AGG + Chr2:45534129-45534148 None:intergenic 35.0%
TGTTATCATCTCTGAATGGA+TGG - Chr2:45529983-45530002 MsG0280009111.01.T01:intron 35.0%
TGTTCAGCATTATTCAGTGA+TGG - Chr2:45535157-45535176 MsG0280009111.01.T01:CDS 35.0%
TGTTGAAGCTACTAAGATGT+CGG - Chr2:45529198-45529217 MsG0280009111.01.T01:three_prime_UTR 35.0%
TGTTTACAGAAGAAAGCAGT+TGG - Chr2:45535067-45535086 MsG0280009111.01.T01:CDS 35.0%
TTAAAGAGGATAGTAGGGTA+GGG + Chr2:45535400-45535419 None:intergenic 35.0%
TTCACTCTTGCACAATGAAA+AGG + Chr2:45531588-45531607 None:intergenic 35.0%
TTCATGATTGCATGGAAGAA+AGG + Chr2:45531629-45531648 None:intergenic 35.0%
TTCTGAACTTGGTTTATGAG+TGG + Chr2:45531553-45531572 None:intergenic 35.0%
TTCTGCAATTAACAACACTG+AGG - Chr2:45530513-45530532 MsG0280009111.01.T01:intron 35.0%
TTGAGTAGAAGAAAAAGCTG+TGG + Chr2:45532799-45532818 None:intergenic 35.0%
TTGCAACCTCTATCTTGATA+TGG + Chr2:45533043-45533062 None:intergenic 35.0%
TTTCCTGTTTATGCTTACCA+GGG - Chr2:45534057-45534076 MsG0280009111.01.T01:intron 35.0%
TTTCGTCAAATACCATGACT+AGG - Chr2:45529412-45529431 MsG0280009111.01.T01:intron 35.0%
TTTCTTATAATAGTGACCGG+AGG + Chr2:45529616-45529635 None:intergenic 35.0%
! AGCATGGTAATGTGCAAATT+GGG + Chr2:45530812-45530831 None:intergenic 35.0%
! CAAACACCACTTTAAAGACA+AGG - Chr2:45529018-45529037 MsG0280009111.01.T01:three_prime_UTR 35.0%
! CACTTTTATACACTACAGCA+TGG + Chr2:45531438-45531457 None:intergenic 35.0%
! CTCTCATCTATAAAGGTACA+AGG + Chr2:45534318-45534337 None:intergenic 35.0%
! GGGACTAGATTGTTATTAAG+TGG - Chr2:45529530-45529549 MsG0280009111.01.T01:intron 35.0%
! GGGTCCAAATTGATAATTTG+TGG - Chr2:45529562-45529581 MsG0280009111.01.T01:intron 35.0%
! TAGCATGGTAATGTGCAAAT+TGG + Chr2:45530813-45530832 None:intergenic 35.0%
! TATAAGACGGATTCTGAACT+TGG + Chr2:45531564-45531583 None:intergenic 35.0%
!! ACACCATTAAGGCTTTGTTT+GGG + Chr2:45533582-45533601 None:intergenic 35.0%
!! AGAGAGGTTTTGTGTTATGA+AGG + Chr2:45530764-45530783 None:intergenic 35.0%
!! ATCTCACTTTAGGCTTTGTT+TGG - Chr2:45533190-45533209 MsG0280009111.01.T01:CDS 35.0%
!! ATTTGATAGTGTCCTAGTCA+TGG + Chr2:45529427-45529446 None:intergenic 35.0%
!! CTGTGAGATTCAAAAGCATT+CGG - Chr2:45534595-45534614 MsG0280009111.01.T01:intron 35.0%
!! GGTTTTGTGTTATGAAGGAA+TGG + Chr2:45530759-45530778 None:intergenic 35.0%
!! TCTCACTTTAGGCTTTGTTT+GGG - Chr2:45533191-45533210 MsG0280009111.01.T01:CDS 35.0%
!! TGTGAGATTCAAAAGCATTC+GGG - Chr2:45534596-45534615 MsG0280009111.01.T01:intron 35.0%
!! TTTAGGGTTTAGGACTAGTT+TGG - Chr2:45529809-45529828 MsG0280009111.01.T01:intron 35.0%
!!! AGTGGCTCTATTTTAGTGAA+GGG + Chr2:45530704-45530723 None:intergenic 35.0%
!!! GATCTGAGAGCATTTCTTTT+TGG + Chr2:45528958-45528977 None:intergenic 35.0%
!!! GCTATTGTATTTTTGGTCAG+AGG - Chr2:45531814-45531833 MsG0280009111.01.T01:intron 35.0%
!!! GTGCAGGTTTTATTTTGAGA+AGG - Chr2:45535422-45535441 MsG0280009111.01.T01:CDS 35.0%
!!! TTGGCGTTGCTTTTAATACT+TGG - Chr2:45535086-45535105 MsG0280009111.01.T01:CDS 35.0%
!!! TTTTTAGGTCAGGATTGGTT+TGG + Chr2:45528792-45528811 None:intergenic 35.0%
AAAAGCTGCACATAAAGCAG+AGG - Chr2:45530319-45530338 MsG0280009111.01.T01:CDS 40.0%
AACAGAACACAGAGATAGAG+CGG - Chr2:45532682-45532701 MsG0280009111.01.T01:intron 40.0%
AACTCAATCTCATGTTCAGC+TGG + Chr2:45534096-45534115 None:intergenic 40.0%
AATACTTACATCACCCCTGT+TGG + Chr2:45530074-45530093 None:intergenic 40.0%
AATTTCTGTAGACGTCGTTG+TGG - Chr2:45533802-45533821 MsG0280009111.01.T01:intron 40.0%
ACAAAACTGTGTGGATATGG+AGG - Chr2:45533954-45533973 MsG0280009111.01.T01:intron 40.0%
ACAAGCCAGCACATAATGTA+GGG + Chr2:45531331-45531350 None:intergenic 40.0%
ACAAGCTTTGCTTGAAAGTC+GGG + Chr2:45535211-45535230 None:intergenic 40.0%
ACAGAGAACACAAAACTGTG+TGG - Chr2:45533945-45533964 MsG0280009111.01.T01:intron 40.0%
ACAGTAATCTACACTAGGAG+CGG + Chr2:45534124-45534143 None:intergenic 40.0%
ACATTAGGTGAATAGAGCAG+TGG + Chr2:45530722-45530741 None:intergenic 40.0%
ACCCTGTCTCTCATCTATAA+AGG + Chr2:45534325-45534344 None:intergenic 40.0%
ACTCCCAAACAAAGCCTTAA+TGG - Chr2:45533576-45533595 MsG0280009111.01.T01:intron 40.0%
AGAACATCAACATGTGTTGG+TGG - Chr2:45531480-45531499 MsG0280009111.01.T01:intron 40.0%
AGTCTCCTCTGATGAGATTT+GGG + Chr2:45533682-45533701 None:intergenic 40.0%
AGTTTATCCGATAGTCTGTG+AGG - Chr2:45529509-45529528 MsG0280009111.01.T01:intron 40.0%
ATAGCTATAATGCCCATGCA+AGG + Chr2:45534016-45534035 None:intergenic 40.0%
ATCCTTAACTGAACTGGGTT+TGG - Chr2:45529046-45529065 MsG0280009111.01.T01:three_prime_UTR 40.0%
ATGAATTCCATGTGGGGATT+AGG + Chr2:45531393-45531412 None:intergenic 40.0%
ATGTGCAAATTGGGGTAGTT+AGG + Chr2:45530803-45530822 None:intergenic 40.0%
ATTAGGTGGAGTCTGTTGTA+TGG - Chr2:45532391-45532410 MsG0280009111.01.T01:intron 40.0%
ATTTGACAACACTGTTCTGC+AGG - Chr2:45532276-45532295 MsG0280009111.01.T01:intron 40.0%
CAAAACTGTGTGGATATGGA+GGG - Chr2:45533955-45533974 MsG0280009111.01.T01:intron 40.0%
CAACCCTGAAACCTTATTGT+AGG - Chr2:45535355-45535374 MsG0280009111.01.T01:CDS 40.0%
CAATACACTATTCGCAACCA+TGG + Chr2:45532646-45532665 None:intergenic 40.0%
CACCGTTAAAGAGGATAGTA+GGG + Chr2:45535405-45535424 None:intergenic 40.0%
CAGCAAAGTTCATGATTGCA+TGG + Chr2:45531637-45531656 None:intergenic 40.0%
CAGCATTATTCAGTGATGGT+TGG - Chr2:45535161-45535180 MsG0280009111.01.T01:CDS 40.0%
CAGGTTGTTGAGGTTATTGA+GGG - Chr2:45529259-45529278 MsG0280009111.01.T01:three_prime_UTR 40.0%
CATGTGTAGGAGGATTTAAG+AGG + Chr2:45534493-45534512 None:intergenic 40.0%
CCAAAAGTAGAGGCAATTCA+CGG + Chr2:45533069-45533088 None:intergenic 40.0%
CTATCCTTGTTCCACTGTAA+GGG - Chr2:45531780-45531799 MsG0280009111.01.T01:intron 40.0%
CTCAAAAATTGTATTGGGGG+AGG + Chr2:45533423-45533442 None:intergenic 40.0%
CTGTGATTGCCTTAAAGTGT+TGG - Chr2:45529938-45529957 MsG0280009111.01.T01:intron 40.0%
CTTCATCCACATCAAGTCAT+AGG - Chr2:45533831-45533850 MsG0280009111.01.T01:intron 40.0%
GAACCAAAAATCTGAGCAAC+AGG - Chr2:45532755-45532774 MsG0280009111.01.T01:intron 40.0%
GAAGGGAAACCATCGTTTAA+TGG - Chr2:45534559-45534578 MsG0280009111.01.T01:intron 40.0%
GAATGAAGGTCACAGGTTAT+AGG + Chr2:45534416-45534435 None:intergenic 40.0%
GATAGAAAACTCTCCTCCAA+GGG - Chr2:45530674-45530693 MsG0280009111.01.T01:intron 40.0%
GATGTTACATTGCCTGAGAA+AGG - Chr2:45529292-45529311 MsG0280009111.01.T01:three_prime_UTR 40.0%
GCACTATAGCTCATGTTCAA+TGG + Chr2:45532999-45533018 None:intergenic 40.0%
GCAGAGGAAATACTATCTAC+AGG - Chr2:45531223-45531242 MsG0280009111.01.T01:intron 40.0%
GCATTTGTCACCAAAAGTAG+AGG + Chr2:45533079-45533098 None:intergenic 40.0%
GCTCATATCAACACCATAGA+AGG + Chr2:45531177-45531196 None:intergenic 40.0%
GGCAATCACAGAATACACAA+AGG + Chr2:45529929-45529948 None:intergenic 40.0%
GGTGACTATGATCTCACTTT+AGG - Chr2:45533180-45533199 MsG0280009111.01.T01:CDS 40.0%
GGTGGTTTGATGTACATTTC+CGG - Chr2:45533976-45533995 MsG0280009111.01.T01:intron 40.0%
GTAATGTGCTGGAAATAGCA+TGG + Chr2:45530872-45530891 None:intergenic 40.0%
GTAGATTACTGTACACACTG+GGG - Chr2:45534132-45534151 MsG0280009111.01.T01:intron 40.0%
GTGGTTTGATGTACATTTCC+GGG - Chr2:45533977-45533996 MsG0280009111.01.T01:intron 40.0%
GTGTAGATTACTGTACACAC+TGG - Chr2:45534130-45534149 MsG0280009111.01.T01:intron 40.0%
GTGTGACATGTGACTCATAA+GGG - Chr2:45535130-45535149 MsG0280009111.01.T01:CDS 40.0%
GTTAAAGAGGATAGTAGGGT+AGG + Chr2:45535401-45535420 None:intergenic 40.0%
GTTTATCCGATAGTCTGTGA+GGG - Chr2:45529510-45529529 MsG0280009111.01.T01:intron 40.0%
GTTTCCTGTTTATGCTTACC+AGG - Chr2:45534056-45534075 MsG0280009111.01.T01:intron 40.0%
TAAAACCTGCACCGTTAAAG+AGG + Chr2:45535414-45535433 None:intergenic 40.0%
TAATCTTGAGCAGGTTGTTG+AGG - Chr2:45529249-45529268 MsG0280009111.01.T01:three_prime_UTR 40.0%
TACAACAGACTCCACCTAAT+AGG + Chr2:45532391-45532410 None:intergenic 40.0%
TACAAGCCAGCACATAATGT+AGG + Chr2:45531332-45531351 None:intergenic 40.0%
TACGCAAAACCTTGATGTTG+CGG - Chr2:45529837-45529856 MsG0280009111.01.T01:intron 40.0%
TCCTTAACTGAACTGGGTTT+GGG - Chr2:45529047-45529066 MsG0280009111.01.T01:three_prime_UTR 40.0%
TCTACTATCCCAGTCCTAAT+GGG + Chr2:45531089-45531108 None:intergenic 40.0%
TCTATCCTTGTTCCACTGTA+AGG - Chr2:45531779-45531798 MsG0280009111.01.T01:intron 40.0%
TGAACTAGAATGAAGGTCAC+AGG + Chr2:45534423-45534442 None:intergenic 40.0%
TGCAATCATGAACTTTGCTG+TGG - Chr2:45531637-45531656 MsG0280009111.01.T01:intron 40.0%
TGGTTGGATAAACCTCGTAT+TGG - Chr2:45535177-45535196 MsG0280009111.01.T01:intron 40.0%
TGTGTGACATGTGACTCATA+AGG - Chr2:45535129-45535148 MsG0280009111.01.T01:CDS 40.0%
TTCTACTATCCCAGTCCTAA+TGG + Chr2:45531090-45531109 None:intergenic 40.0%
TTGCATGGGCATTATAGCTA+TGG - Chr2:45534015-45534034 MsG0280009111.01.T01:intron 40.0%
TTTCTAATGAGTCGCTCGAA+GGG - Chr2:45534542-45534561 MsG0280009111.01.T01:intron 40.0%
! AAGAAAGGGCTTTTGGATCA+AGG + Chr2:45531614-45531633 None:intergenic 40.0%
! ACTTGGTTCTTCCGATCATT+TGG - Chr2:45535103-45535122 MsG0280009111.01.T01:CDS 40.0%
! AGAAAGGGCTTTTGGATCAA+GGG + Chr2:45531613-45531632 None:intergenic 40.0%
! AGCAAATCTTTGGTGGCTTT+CGG - Chr2:45530992-45531011 MsG0280009111.01.T01:intron 40.0%
! AGCAGCCGCTATTGTATTTT+TGG - Chr2:45531807-45531826 MsG0280009111.01.T01:intron 40.0%
! ATAGAGTTTAGAGCATACCG+TGG + Chr2:45534705-45534724 None:intergenic 40.0%
! ATTAGCGTAGTCGACTTCTT+TGG + Chr2:45528906-45528925 None:intergenic 40.0%
! GAACATCAACATGTGTTGGT+GGG - Chr2:45531481-45531500 MsG0280009111.01.T01:intron 40.0%
! GAAGTGGGATTCTTGCTATA+TGG - Chr2:45529143-45529162 MsG0280009111.01.T01:three_prime_UTR 40.0%
! GCATGGTAATGTGCAAATTG+GGG + Chr2:45530811-45530830 None:intergenic 40.0%
! GTGATTTGTCATAGAGCAGT+TGG - Chr2:45532958-45532977 MsG0280009111.01.T01:intron 40.0%
! TAGAGTTTAGAGCATACCGT+GGG + Chr2:45534704-45534723 None:intergenic 40.0%
! TCCCCACATGGAATTCATTT+TGG - Chr2:45531395-45531414 MsG0280009111.01.T01:intron 40.0%
! TTAGCGTAGTCGACTTCTTT+GGG + Chr2:45528905-45528924 None:intergenic 40.0%
! TTGGTGATAGAGAAAGGAGT+AGG + Chr2:45528939-45528958 None:intergenic 40.0%
! TTTTCTAATGAGTCGCTCGA+AGG - Chr2:45534541-45534560 MsG0280009111.01.T01:intron 40.0%
!! ACACAGCAGAATTGCTTTTG+CGG + Chr2:45533156-45533175 None:intergenic 40.0%
!! ACACAGTTTTGTGTTCTCTG+TGG + Chr2:45533946-45533965 None:intergenic 40.0%
!! CACACCATTAAGGCTTTGTT+TGG + Chr2:45533583-45533602 None:intergenic 40.0%
!! GTCCTGCTAAAGCATTTTTG+AGG + Chr2:45532426-45532445 None:intergenic 40.0%
!! TAAGGCTTTGTTTGGGAGTT+TGG + Chr2:45533575-45533594 None:intergenic 40.0%
!! TATCTCTGTTGGTAATGTGC+TGG + Chr2:45530883-45530902 None:intergenic 40.0%
!! TGGTGTTGATATGAGCACTT+TGG - Chr2:45531181-45531200 MsG0280009111.01.T01:intron 40.0%
!! TTAGGCTTTGTTTGGGAGTT+TGG - Chr2:45533198-45533217 MsG0280009111.01.T01:CDS 40.0%
!!! CAGTGGCTCTATTTTAGTGA+AGG + Chr2:45530705-45530724 None:intergenic 40.0%
!!! GAGGGTTTTGGAAAAAAGGA+AGG + Chr2:45533538-45533557 None:intergenic 40.0%
!!! GTGTAGGTTGTTTTGGATGT+TGG - Chr2:45529115-45529134 MsG0280009111.01.T01:three_prime_UTR 40.0%
!!! TTTTGAGTTCCCCCAAATGA+GGG - Chr2:45533436-45533455 MsG0280009111.01.T01:intron 40.0%
!!! TTTTTGAGTTCCCCCAAATG+AGG - Chr2:45533435-45533454 MsG0280009111.01.T01:intron 40.0%
AAAAATCTGAGCAACAGGGC+AGG - Chr2:45532760-45532779 MsG0280009111.01.T01:intron 45.0%
AAAATCTGAGCAACAGGGCA+GGG - Chr2:45532761-45532780 MsG0280009111.01.T01:intron 45.0%
AAGATGCTCTGACCTTGCAT+GGG - Chr2:45534001-45534020 MsG0280009111.01.T01:intron 45.0%
ACCCAAACCCAGTTCAGTTA+AGG + Chr2:45529051-45529070 None:intergenic 45.0%
ACTATCCTCTTTAACGGTGC+AGG - Chr2:45535406-45535425 MsG0280009111.01.T01:CDS 45.0%
AGCTGTTTACATCGATGTGC+TGG - Chr2:45533112-45533131 MsG0280009111.01.T01:CDS 45.0%
AGGTCATGTTGAAGTTGGGA+TGG + Chr2:45532054-45532073 None:intergenic 45.0%
ATAGAAGACATTGGGAGGAG+AGG + Chr2:45533501-45533520 None:intergenic 45.0%
ATGTCCCTTACAGTGGAACA+AGG + Chr2:45531787-45531806 None:intergenic 45.0%
ATTTCCCCAATAGCGAAGCT+TGG - Chr2:45532196-45532215 MsG0280009111.01.T01:intron 45.0%
CAATTGTTGCCGCAACATCA+AGG + Chr2:45529849-45529868 None:intergenic 45.0%
CAGTCTCCTCTGATGAGATT+TGG + Chr2:45533683-45533702 None:intergenic 45.0%
CATCAAGTCATAGGAACTGC+TGG - Chr2:45533840-45533859 MsG0280009111.01.T01:intron 45.0%
CATGGTTCTTACTCACTCAG+CGG + Chr2:45528834-45528853 None:intergenic 45.0%
CGTTTAATGGAGGTTGAGCT+TGG - Chr2:45534572-45534591 MsG0280009111.01.T01:intron 45.0%
CTATCCAAGCTTCGCTATTG+GGG + Chr2:45532203-45532222 None:intergenic 45.0%
CTCTGATGAGATTTGGGCAT+GGG + Chr2:45533676-45533695 None:intergenic 45.0%
CTTCGCTATTGGGGAAATTG+TGG + Chr2:45532194-45532213 None:intergenic 45.0%
GAACAATCCTAATCCCCACA+TGG - Chr2:45531383-45531402 MsG0280009111.01.T01:intron 45.0%
GAGGAGGTCATGTTGAAGTT+GGG + Chr2:45532058-45532077 None:intergenic 45.0%
GATAGAGCGGAACAGTGATT+AGG - Chr2:45532695-45532714 MsG0280009111.01.T01:intron 45.0%
GCACCGTTAAAGAGGATAGT+AGG + Chr2:45535406-45535425 None:intergenic 45.0%
GCAGGTTGTTGAGGTTATTG+AGG - Chr2:45529258-45529277 MsG0280009111.01.T01:three_prime_UTR 45.0%
GCAGTTCCTATGACTTGATG+TGG + Chr2:45533840-45533859 None:intergenic 45.0%
GCATGCTGTTCTAATCTTCG+CGG + Chr2:45532731-45532750 None:intergenic 45.0%
GCTATCCAAGCTTCGCTATT+GGG + Chr2:45532204-45532223 None:intergenic 45.0%
GCTCAACCTCCATTAAACGA+TGG + Chr2:45534571-45534590 None:intergenic 45.0%
GCTGAGTGAGTAAGAACCAT+GGG - Chr2:45528833-45528852 MsG0280009111.01.T01:three_prime_UTR 45.0%
GGAAAAAAGGAAGGAGCAAG+TGG + Chr2:45533529-45533548 None:intergenic 45.0%
GGATAGAAAACTCTCCTCCA+AGG - Chr2:45530673-45530692 MsG0280009111.01.T01:intron 45.0%
GGGAAACCATCGTTTAATGG+AGG - Chr2:45534562-45534581 MsG0280009111.01.T01:intron 45.0%
GGTTATTGAGGGTTCTGTTG+AGG - Chr2:45529270-45529289 MsG0280009111.01.T01:three_prime_UTR 45.0%
GTTCTGCAGGTCCAATTCAT+TGG - Chr2:45532289-45532308 MsG0280009111.01.T01:intron 45.0%
TAAAAGTTGAAGCCTGCGTG+CGG - Chr2:45532610-45532629 MsG0280009111.01.T01:intron 45.0%
TAAGATGCTCTGACCTTGCA+TGG - Chr2:45534000-45534019 MsG0280009111.01.T01:intron 45.0%
TAGAAGACATTGGGAGGAGA+GGG + Chr2:45533500-45533519 None:intergenic 45.0%
TCACCATCACTCACATGTGT+AGG + Chr2:45534506-45534525 None:intergenic 45.0%
TCATGTTGAAGTTGGGATGG+AGG + Chr2:45532051-45532070 None:intergenic 45.0%
TCTAGTCCCTCACAGACTAT+CGG + Chr2:45529519-45529538 None:intergenic 45.0%
TGCAACTGTGTAAGTGGCTT+TGG - Chr2:45531671-45531690 MsG0280009111.01.T01:intron 45.0%
TGCTATCCAAGCTTCGCTAT+TGG + Chr2:45532205-45532224 None:intergenic 45.0%
TTTAGTGAAGGGCAAACCCT+TGG + Chr2:45530693-45530712 None:intergenic 45.0%
! AACTGAACTGGGTTTGGGTT+TGG - Chr2:45529052-45529071 MsG0280009111.01.T01:three_prime_UTR 45.0%
! ACTGAACTGGGTTTGGGTTT+GGG - Chr2:45529053-45529072 MsG0280009111.01.T01:three_prime_UTR 45.0%
! AGGAACTGCTGGTCTAGTAA+AGG - Chr2:45533851-45533870 MsG0280009111.01.T01:intron 45.0%
! CCGTGAATTGCCTCTACTTT+TGG - Chr2:45533066-45533085 MsG0280009111.01.T01:CDS 45.0%
! CTACATCTGCTTGCTGAAAC+TGG - Chr2:45532160-45532179 MsG0280009111.01.T01:intron 45.0%
! CTTTGTTTGGGAGTTTGGAG+GGG - Chr2:45533203-45533222 MsG0280009111.01.T01:CDS 45.0%
! CTTTGTTTGGGAGTTTGGAG+GGG + Chr2:45533222-45533203 None:intergenic 45.0%
! GAAAGGGCTTTTGGATCAAG+GGG + Chr2:45531612-45531631 None:intergenic 45.0%
! TAGCGTAGTCGACTTCTTTG+GGG + Chr2:45528904-45528923 None:intergenic 45.0%
! TGCATGGAAGAAAGGGCTTT+TGG + Chr2:45531621-45531640 None:intergenic 45.0%
! TGCCCTGTTGCTCAGATTTT+TGG + Chr2:45532761-45532780 None:intergenic 45.0%
! TTTGAGTTCCCCCAAATGAG+GGG - Chr2:45533437-45533456 MsG0280009111.01.T01:intron 45.0%
! TTTGGCAAAGCCTTTTGCTG+AGG - Chr2:45531199-45531218 MsG0280009111.01.T01:intron 45.0%
!! CGGGAAAAAGTACCAATACG+AGG + Chr2:45535192-45535211 None:intergenic 45.0%
!! GCTTTGTTTGGGAGTTTGGA+GGG - Chr2:45533202-45533221 MsG0280009111.01.T01:CDS 45.0%
!! GCTTTGTTTGGGAGTTTGGA+GGG + Chr2:45533221-45533202 None:intergenic 45.0%
!! TCAAGAGCGCTGTCAAATTG+AGG - Chr2:45531701-45531720 MsG0280009111.01.T01:intron 45.0%
!! TTAGGTCAGGATTGGTTTGG+CGG + Chr2:45528789-45528808 None:intergenic 45.0%
!!! AGGGGAGGGTTTTGGAAAAA+AGG + Chr2:45533542-45533561 None:intergenic 45.0%
!!! GTTGTTTTGGATGTTGGTGC+TGG - Chr2:45529121-45529140 MsG0280009111.01.T01:three_prime_UTR 45.0%
!! AAATTAAAATATGTATAAAT+TGG + Chr2:45533787-45533806 None:intergenic 5.0%
!!! ATAAGAAAATATTATTTTTT+CGG - Chr2:45529628-45529647 MsG0280009111.01.T01:three_prime_UTR 5.0%
!!! TTTAAAAATATTTATTTTGT+AGG - Chr2:45531033-45531052 MsG0280009111.01.T01:intron 5.0%
AACTGTGTGGATATGGAGGG+TGG - Chr2:45533958-45533977 MsG0280009111.01.T01:intron 50.0%
AGACTCACTGGAAATGGAGG+AGG + Chr2:45532074-45532093 None:intergenic 50.0%
AGCAGATGTAGCAGCAACAG+TGG + Chr2:45532151-45532170 None:intergenic 50.0%
AGCTCAAGCAGGTGCAAAGA+AGG - Chr2:45529168-45529187 MsG0280009111.01.T01:three_prime_UTR 50.0%
ATCCACATGCGAGCATGACT+AGG + Chr2:45531062-45531081 None:intergenic 50.0%
ATCCTAGTCATGCTCGCATG+TGG - Chr2:45531057-45531076 MsG0280009111.01.T01:intron 50.0%
CCATCACTCACATGTGTAGG+AGG + Chr2:45534503-45534522 None:intergenic 50.0%
CCATGCCCAAATCTCATCAG+AGG - Chr2:45533674-45533693 MsG0280009111.01.T01:intron 50.0%
CCTCCTACACATGTGAGTGA+TGG - Chr2:45534500-45534519 MsG0280009111.01.T01:intron 50.0%
CCTCTGATGAGATTTGGGCA+TGG + Chr2:45533677-45533696 None:intergenic 50.0%
CGCTGAGTGAGTAAGAACCA+TGG - Chr2:45528832-45528851 MsG0280009111.01.T01:three_prime_UTR 50.0%
CGTCCCTGGTAAGCATAAAC+AGG + Chr2:45534063-45534082 None:intergenic 50.0%
GAGATATGTCGGAGACTCAC+TGG + Chr2:45532086-45532105 None:intergenic 50.0%
GAGCTTCAAGCAGTATCCCA+CGG - Chr2:45534685-45534704 MsG0280009111.01.T01:intron 50.0%
GCGAAGCTTGGATAGCATTG+TGG - Chr2:45532208-45532227 MsG0280009111.01.T01:intron 50.0%
GCTATATGGTCAGCTCAAGC+AGG - Chr2:45529157-45529176 MsG0280009111.01.T01:three_prime_UTR 50.0%
GCTCTCAGATCGTGTTCGTA+TGG - Chr2:45528967-45528986 MsG0280009111.01.T01:three_prime_UTR 50.0%
GGAGGAGGTCATGTTGAAGT+TGG + Chr2:45532059-45532078 None:intergenic 50.0%
GGCGATTACCAGTCAGCTAT+GGG - Chr2:45531119-45531138 MsG0280009111.01.T01:intron 50.0%
GTAATCTACACTAGGAGCGG+TGG + Chr2:45534121-45534140 None:intergenic 50.0%
GTCAGCCCTACATTATGTGC+TGG - Chr2:45531323-45531342 MsG0280009111.01.T01:intron 50.0%
GTGCAATGCAAGCAAGCAGT+AGG - Chr2:45532930-45532949 MsG0280009111.01.T01:intron 50.0%
TAGTCATGCTCGCATGTGGA+TGG - Chr2:45531061-45531080 MsG0280009111.01.T01:intron 50.0%
TGACTGTTTGACTGCCACAG+TGG - Chr2:45533878-45533897 MsG0280009111.01.T01:intron 50.0%
TGCAAGCAAGCAGTAGGTGT+AGG - Chr2:45532936-45532955 MsG0280009111.01.T01:intron 50.0%
TGTCGGAGACTCACTGGAAA+TGG + Chr2:45532080-45532099 None:intergenic 50.0%
TGTTGAAGTTGGGATGGAGG+AGG + Chr2:45532048-45532067 None:intergenic 50.0%
TTCCTCTATGTCTGCCACTG+TGG + Chr2:45533895-45533914 None:intergenic 50.0%
TTCCTCTGCTCCTCAGCAAA+AGG + Chr2:45531212-45531231 None:intergenic 50.0%
TTTGGGAGTTTGGAGGGGAA+GGG - Chr2:45533208-45533227 MsG0280009111.01.T01:CDS 50.0%
! CAAGGTCAGAGCATCTTACC+CGG + Chr2:45533998-45534017 None:intergenic 50.0%
! GTAGTCGACTTCTTTGGGGA+CGG + Chr2:45528900-45528919 None:intergenic 50.0%
! TCAACATGTGTTGGTGGGTC+AGG - Chr2:45531486-45531505 MsG0280009111.01.T01:intron 50.0%
! TGTATTGGGGGAGGGTTTTG+AGG + Chr2:45533414-45533433 None:intergenic 50.0%
!! GGCTTTGTTTGGGAGTTTGG+AGG - Chr2:45533201-45533220 MsG0280009111.01.T01:CDS 50.0%
!! GGCTTTGTTTGGGAGTTTGG+AGG + Chr2:45533220-45533201 None:intergenic 50.0%
!! GTATTGGGGGAGGGTTTTGA+GGG + Chr2:45533413-45533432 None:intergenic 50.0%
!! TGGATGTTGGTGCTGGAAGT+GGG - Chr2:45529128-45529147 MsG0280009111.01.T01:three_prime_UTR 50.0%
!! TTGGATGTTGGTGCTGGAAG+TGG - Chr2:45529127-45529146 MsG0280009111.01.T01:three_prime_UTR 50.0%
!!! AGGGTTTTGAGGGGTTATGG+AGG + Chr2:45533403-45533422 None:intergenic 50.0%
!!! GGGTTTTGAGGGGTTATGGA+GGG + Chr2:45533402-45533421 None:intergenic 50.0%
!!! GTTTTCGGAAGAAGTGCCCA+TGG + Chr2:45528852-45528871 None:intergenic 50.0%
!!! TATTGGGGGAGGGTTTTGAG+GGG + Chr2:45533412-45533431 None:intergenic 50.0%
ACATTGGGAGGAGAGGGCTT+TGG + Chr2:45533494-45533513 None:intergenic 55.0%
ACCAGTCAGCTATGGGCGAT+TGG - Chr2:45531126-45531145 MsG0280009111.01.T01:intron 55.0%
ACTTCTTCCGAAAACGCCGC+CGG - Chr2:45528857-45528876 MsG0280009111.01.T01:three_prime_UTR 55.0%
AGTGAAGGGCAAACCCTTGG+AGG + Chr2:45530690-45530709 None:intergenic 55.0%
CGGAGACTCACTGGAAATGG+AGG + Chr2:45532077-45532096 None:intergenic 55.0%
CGTGCGGTTGAATGATGCCA+TGG - Chr2:45532626-45532645 MsG0280009111.01.T01:intron 55.0%
GAAATGTGCGCTAGCTCAGC+TGG - Chr2:45532894-45532913 MsG0280009111.01.T01:intron 55.0%
GCATGTGGATGGCACCCATT+AGG - Chr2:45531072-45531091 MsG0280009111.01.T01:CDS 55.0%
GCTTGAAGCTCCGCGAACAA+AGG + Chr2:45534676-45534695 None:intergenic 55.0%
GGATGGCACCCATTAGGACT+GGG - Chr2:45531078-45531097 MsG0280009111.01.T01:CDS 55.0%
GGCTGCTATGTCCCTTACAG+TGG + Chr2:45531794-45531813 None:intergenic 55.0%
GGGCGATTACCAGTCAGCTA+TGG - Chr2:45531118-45531137 MsG0280009111.01.T01:intron 55.0%
GGTTCTTACTCACTCAGCGG+TGG + Chr2:45528831-45528850 None:intergenic 55.0%
GTTTGGGAGTTTGGAGGGGA+AGG - Chr2:45533207-45533226 MsG0280009111.01.T01:CDS 55.0%
GTTTGGGAGTTTGGAGGGGA+GGG + Chr2:45533226-45533207 None:intergenic 55.0%
TCATATGTGCTCGTGACCGC+TGG - Chr2:45530042-45530061 MsG0280009111.01.T01:intron 55.0%
TGCCACAGTGGCAGACATAG+AGG - Chr2:45533890-45533909 MsG0280009111.01.T01:intron 55.0%
TGCTTACCAGGGACGAAGTG+AGG - Chr2:45534068-45534087 MsG0280009111.01.T01:intron 55.0%
TGGATGGCACCCATTAGGAC+TGG - Chr2:45531077-45531096 MsG0280009111.01.T01:CDS 55.0%
TGTTTGGGAGTTTGGAGGGG+AGG + Chr2:45533225-45533206 None:intergenic 55.0%
TTTGGGAGTTTGGAGGGGAG+GGG + Chr2:45533565-45533584 None:intergenic 55.0%
! AGCCTTTTGCTGAGGAGCAG+AGG - Chr2:45531207-45531226 MsG0280009111.01.T01:intron 55.0%
!! ACCGCTGGCTCAAACCAACA+GGG - Chr2:45530057-45530076 MsG0280009111.01.T01:intron 55.0%
!! AGAGCAGTTGGTGTTGCACG+AGG - Chr2:45532970-45532989 MsG0280009111.01.T01:intron 55.0%
!!! GGGAGGGTTTTGAGGGGTTA+TGG + Chr2:45533406-45533425 None:intergenic 55.0%
CTGGATCCTCACTTCGTCCC+TGG + Chr2:45534077-45534096 None:intergenic 60.0%
CTGTACACACTGGGGTCAGC+AGG - Chr2:45534140-45534159 MsG0280009111.01.T01:intron 60.0%
GAGTTTGGAGGGGAAGGGAG+GGG - Chr2:45533213-45533232 MsG0280009111.01.T01:CDS 60.0%
GCCAATCGCCCATAGCTGAC+TGG + Chr2:45531130-45531149 None:intergenic 60.0%
GGAGTTTGGAGGGGAAGGGA+GGG - Chr2:45533212-45533231 MsG0280009111.01.T01:CDS 60.0%
GGCATCATTCAACCGCACGC+AGG + Chr2:45532625-45532644 None:intergenic 60.0%
TGCGCTAGCTCAGCTGGACT+GGG - Chr2:45532900-45532919 MsG0280009111.01.T01:intron 60.0%
! GTCGACTTCTTTGGGGACGG+CGG + Chr2:45528897-45528916 None:intergenic 60.0%
! TTGGGAGGAGAGGGCTTTGG+AGG + Chr2:45533491-45533510 None:intergenic 60.0%
!! CCCCTGTTGGTTTGAGCCAG+CGG + Chr2:45530061-45530080 None:intergenic 60.0%
!! CCGCTGGCTCAAACCAACAG+GGG - Chr2:45530058-45530077 MsG0280009111.01.T01:intron 60.0%
!! GACCGCTGGCTCAAACCAAC+AGG - Chr2:45530056-45530075 MsG0280009111.01.T01:intron 60.0%
GAAGGGAGGGGAGGGCTTTG+GGG - Chr2:45533225-45533244 MsG0280009111.01.T01:CDS 65.0%
GAGTTTGGAGGGGAGGGGAG+GGG + Chr2:45533560-45533579 None:intergenic 65.0%
GCGCTAGCTCAGCTGGACTG+GGG - Chr2:45532901-45532920 MsG0280009111.01.T01:intron 65.0%
GGAAGGGAGGGGAGGGCTTT+GGG - Chr2:45533224-45533243 MsG0280009111.01.T01:CDS 65.0%
GGAGTTTGGAGGGGAGGGGA+GGG + Chr2:45533561-45533580 None:intergenic 65.0%
GGGAGTTTGGAGGGGAAGGG+AGG - Chr2:45533211-45533230 MsG0280009111.01.T01:CDS 65.0%
GTGCGCTAGCTCAGCTGGAC+TGG - Chr2:45532899-45532918 MsG0280009111.01.T01:intron 65.0%
TCTTCCGAAAACGCCGCCGG+TGG - Chr2:45528860-45528879 MsG0280009111.01.T01:three_prime_UTR 65.0%
TTGGAGGGGAAGGGAGGGGA+GGG - Chr2:45533217-45533236 MsG0280009111.01.T01:CDS 65.0%
TTTGGAGGGGAAGGGAGGGG+AGG - Chr2:45533216-45533235 MsG0280009111.01.T01:CDS 65.0%
! AAGGGAGGGGAGGGCTTTGG+GGG - Chr2:45533226-45533245 MsG0280009111.01.T01:CDS 65.0%
GGGAAGGGAGGGGAGGGCTT+TGG - Chr2:45533223-45533242 MsG0280009111.01.T01:CDS 70.0%
GGGAGTTTGGAGGGGAGGGG+AGG + Chr2:45533562-45533581 None:intergenic 70.0%
TCCGAAAACGCCGCCGGTGG+TGG - Chr2:45528863-45528882 MsG0280009111.01.T01:three_prime_UTR 70.0%
TTGGAGGGGAGGGGAGGGGA+GGG + Chr2:45533556-45533575 None:intergenic 70.0%
TTTGGAGGGGAGGGGAGGGG+AGG + Chr2:45533557-45533576 None:intergenic 70.0%
! CTTTGGGGACGGCGGTGCCT+CGG + Chr2:45528889-45528908 None:intergenic 70.0%
! GCCACCACCGGCGGCGTTTT+CGG + Chr2:45528867-45528886 None:intergenic 70.0%
! GGGAGGGGAGGGGAGGGTTT+TGG + Chr2:45533550-45533569 None:intergenic 70.0%
!! AGGGAGGGGAGGGCTTTGGG+GGG - Chr2:45533227-45533246 MsG0280009111.01.T01:CDS 70.0%
!! AGGGGAGGGCTTTGGGGGGT+TGG - Chr2:45533231-45533250 MsG0280009111.01.T01:CDS 70.0%
! GGCGGTGCCTCGGCCACCAC+CGG + Chr2:45528879-45528898 None:intergenic 80.0%
! GGTGCCTCGGCCACCACCGG+CGG + Chr2:45528876-45528895 None:intergenic 80.0%
!! AACGCCGCCGGTGGTGGCCG+AGG - Chr2:45528869-45528888 MsG0280009111.01.T01:three_prime_UTR 80.0%
Chromosome Type Strat End Strand Name
Chr2 gene 45528785 45535526 45528785 ID=MsG0280009111.01;Name=MsG0280009111.01
Chr2 mRNA 45528785 45535526 45528785 ID=MsG0280009111.01.T01;Parent=MsG0280009111.01;Name=MsG0280009111.01.T01;_AED=0.49;_eAED=0.51;_QI=66|0.75|0.77|1|0.87|0.77|9|574|391
Chr2 exon 45535272 45535526 45535272 ID=MsG0280009111.01.T01:exon:23970;Parent=MsG0280009111.01.T01
Chr2 exon 45534998 45535190 45534998 ID=MsG0280009111.01.T01:exon:23971;Parent=MsG0280009111.01.T01
Chr2 exon 45534227 45534332 45534227 ID=MsG0280009111.01.T01:exon:23972;Parent=MsG0280009111.01.T01
Chr2 exon 45533063 45533256 45533063 ID=MsG0280009111.01.T01:exon:23973;Parent=MsG0280009111.01.T01
Chr2 exon 45531063 45531109 45531063 ID=MsG0280009111.01.T01:exon:23974;Parent=MsG0280009111.01.T01
Chr2 exon 45530313 45530498 45530313 ID=MsG0280009111.01.T01:exon:23975;Parent=MsG0280009111.01.T01
Chr2 exon 45530150 45530233 45530150 ID=MsG0280009111.01.T01:exon:23976;Parent=MsG0280009111.01.T01
Chr2 exon 45529605 45529826 45529605 ID=MsG0280009111.01.T01:exon:23977;Parent=MsG0280009111.01.T01
Chr2 exon 45528785 45529313 45528785 ID=MsG0280009111.01.T01:exon:23978;Parent=MsG0280009111.01.T01
Chr2 five_prime_UTR 45535461 45535526 45535461 ID=MsG0280009111.01.T01:five_prime_utr;Parent=MsG0280009111.01.T01
Chr2 CDS 45535272 45535460 45535272 ID=MsG0280009111.01.T01:cds;Parent=MsG0280009111.01.T01
Chr2 CDS 45534998 45535190 45534998 ID=MsG0280009111.01.T01:cds;Parent=MsG0280009111.01.T01
Chr2 CDS 45534227 45534332 45534227 ID=MsG0280009111.01.T01:cds;Parent=MsG0280009111.01.T01
Chr2 CDS 45533063 45533256 45533063 ID=MsG0280009111.01.T01:cds;Parent=MsG0280009111.01.T01
Chr2 CDS 45531063 45531109 45531063 ID=MsG0280009111.01.T01:cds;Parent=MsG0280009111.01.T01
Chr2 CDS 45530313 45530498 45530313 ID=MsG0280009111.01.T01:cds;Parent=MsG0280009111.01.T01
Chr2 CDS 45530150 45530233 45530150 ID=MsG0280009111.01.T01:cds;Parent=MsG0280009111.01.T01
Chr2 CDS 45529650 45529826 45529650 ID=MsG0280009111.01.T01:cds;Parent=MsG0280009111.01.T01
Chr2 three_prime_UTR 45529605 45529649 45529605 ID=MsG0280009111.01.T01:three_prime_utr;Parent=MsG0280009111.01.T01
Chr2 three_prime_UTR 45528785 45529313 45528785 ID=MsG0280009111.01.T01:three_prime_utr;Parent=MsG0280009111.01.T01
Gene Sequence

>MsG0280009111.01.T01

ATGGGCACTTCTTCCGAAAACGCCGCCGGTGGTGGCCGAGGCACCGCCGTCCCCAAAGAAGTCGACTACGCTAATTACTTTTGCACCTACTCCTTTCTCTATCACCAAAAAGAAATGCTCTCAGATCGTGTTCGTATGGATGCTTACTTCAACGCTGTTTTTGAAAACAAACACCACTTTAAAGACAAGGTTGTTTTGGATGTTGGTGCTGGAAGTGGGATTCTTGCTATATGGTCAGCTCAAGCAGGTGCAAAGAAGGTTTATGCTGTTGAAGCTACTAAGATGTCGGAACATGCTCGTGCGCTTGTGAAATCGAATAATCTTGAGCAGGTTGTTGAGGTTATTGAGGGTTCTGTTGAGGATGTTACATTGCCTGAGAAAGTTGATGTTATCATCTCTGAATGGATGGGTTATTTTCTTTTGCGAGAATCTATGTTTGATTCTGTCATATGTGCTCGTGACCGCTGGCTCAAACCAACAGGGGTGATGTATCCTAGTCATGCTCGCATGTGGATGGCACCCATTAGGACTGGGATAGTAGAACAAAAGTTGGGCGATTACCAGTCAGCTATGGGCGATTGGCACAACTTTGTCGATGAAACAAAAGCCTTCTATGGTGTTGATATGAGCACTTTGGCAAAGCCTTTTGCTGAGGAGCAGAGGAAATACTATCTACAGGCAAGCTTTGTTTGGGAGTTTGGAGGGGAAGGGAGGGGAGGGCTTTGGGGGACGTCGTTGTGGAGCAATCTTCATCCACATCAAGTCATAGGAACTGCTGGTCTAGTAAAGGAAATTGACTGTTTGACTGCCACAGTGGCAGACATAGAGGAAGTCAGATCAAACTTTTCTCTGTCAATAACCACAGAGAACACAAAACTGTGTGGATATGGAGGGTGGTTTGATGTACATTTCCGGGGACGAAGTGAGGATCCAGCTGAACATGAGATTGAGTTAACCACCGCTCCTAGTGTAGATTACTGTACACACTGGGGTCAGCAGGTTTTCCTCTTAAATCCTCCTACACATGTGAGTGATGGTGATGAGTTAACTGTTAATTTTCTAATGAGTCGCTCGAAGGGAAACCATCGTTTAATGGAGGTTGAGCTTGGCTGTGAGATTCAAAAGCATTCGGGCAAGCTTGCTACACCTTTCAAAAATAAGTACTATATTGAATGA
Protein sequence

>MsG0280009111.01.T01

MGTSSENAAGGGRGTAVPKEVDYANYFCTYSFLYHQKEMLSDRVRMDAYFNAVFENKHHFKDKVVLDVGAGSGILAIWSAQAGAKKVYAVEATKMSEHARALVKSNNLEQVVEVIEGSVEDVTLPEKVDVIISEWMGYFLLRESMFDSVICARDRWLKPTGVMYPSHARMWMAPIRTGIVEQKLGDYQSAMGDWHNFVDETKAFYGVDMSTLAKPFAEEQRKYYLQASFVWEFGGEGRGGLWGTSLWSNLHPHQVIGTAGLVKEIDCLTATVADIEEVRSNFSLSITTENTKLCGYGGWFDVHFRGRSEDPAEHEIELTTAPSVDYCTHWGQQVFLLNPPTHVSDGDELTVNFLMSRSKGNHRLMEVELGCEIQKHSGKLATPFKNKYYIE*