Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046444.01.T01 | XP_003598026.1 | 100 | 197 | 0 | 0 | 1 | 197 | 1 | 197 | 5.17E-142 | 404 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046444.01.T01 | Q9FLF0 | 90.909 | 187 | 17 | 0 | 1 | 187 | 1 | 187 | 2.09E-123 | 349 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046444.01.T01 | B7FMD4 | 100.000 | 197 | 0 | 0 | 1 | 197 | 1 | 197 | 2.47e-142 | 404 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048216.01 | MsG0880046444.01 | 0.825122 | 5.569216e-54 | 5.030895e-51 |
| MsG0080048687.01 | MsG0880046444.01 | 0.877673 | 5.204847e-69 | 2.639867e-65 |
| MsG0080048944.01 | MsG0880046444.01 | 0.820114 | 8.136881e-53 | 6.381817e-50 |
| MsG0080048971.01 | MsG0880046444.01 | 0.906226 | 1.860621e-80 | 3.120285e-76 |
| MsG0180000339.01 | MsG0880046444.01 | 0.811348 | 7.321436e-51 | 4.521020e-48 |
| MsG0180000575.01 | MsG0880046444.01 | 0.831049 | 2.080551e-55 | 2.231830e-52 |
| MsG0180000614.01 | MsG0880046444.01 | 0.827554 | 1.467424e-54 | 1.421351e-51 |
| MsG0180000615.01 | MsG0880046444.01 | 0.849271 | 3.599846e-60 | 6.788009e-57 |
| MsG0180001102.01 | MsG0880046444.01 | 0.848434 | 6.143057e-60 | 1.127239e-56 |
| MsG0880044711.01 | MsG0880046444.01 | 0.838468 | 2.824317e-57 | 3.786435e-54 |
| MsG0880045072.01 | MsG0880046444.01 | 0.819864 | 9.285386e-53 | 7.230785e-50 |
| MsG0880045631.01 | MsG0880046444.01 | 0.803612 | 3.207807e-49 | 1.619238e-46 |
| MsG0880046177.01 | MsG0880046444.01 | 0.880211 | 6.618675e-70 | 3.696798e-66 |
| MsG0880046444.01 | MsG0880046575.01 | 0.800200 | 1.611490e-48 | 7.458037e-46 |
| MsG0880046444.01 | MsG0880046879.01 | 0.871790 | 5.225408e-67 | 2.134816e-63 |
| MsG0880046444.01 | MsG0880046933.01 | 0.843839 | 1.094844e-58 | 1.734723e-55 |
| MsG0880046444.01 | MsG0880047082.01 | 0.835099 | 2.043184e-56 | 2.472966e-53 |
| MsG0880046444.01 | MsG0880047388.01 | 0.868382 | 6.808183e-66 | 2.457765e-62 |
| MsG0880046444.01 | MsG0880047607.01 | 0.801196 | 1.009213e-48 | 4.790264e-46 |
| MsG0180003115.01 | MsG0880046444.01 | 0.838754 | 2.382742e-57 | 3.222281e-54 |
| MsG0180003117.01 | MsG0880046444.01 | 0.801774 | 7.682701e-49 | 3.700198e-46 |
| MsG0180003313.01 | MsG0880046444.01 | 0.891412 | 4.067134e-74 | 3.562345e-70 |
| MsG0180003612.01 | MsG0880046444.01 | 0.885815 | 5.871134e-72 | 4.090051e-68 |
| MsG0180003729.01 | MsG0880046444.01 | 0.841126 | 5.740859e-58 | 8.353154e-55 |
| MsG0180003793.01 | MsG0880046444.01 | 0.885309 | 9.088091e-72 | 6.207011e-68 |
| MsG0180004009.01 | MsG0880046444.01 | 0.830361 | 3.067643e-55 | 3.224889e-52 |
| MsG0180004129.01 | MsG0880046444.01 | 0.849856 | 2.471174e-60 | 4.749038e-57 |
| MsG0180004130.01 | MsG0880046444.01 | 0.833533 | 5.051071e-56 | 5.833365e-53 |
| MsG0180004509.01 | MsG0880046444.01 | 0.803390 | 3.566815e-49 | 1.790143e-46 |
| MsG0180004607.01 | MsG0880046444.01 | 0.864253 | 1.388672e-64 | 4.331911e-61 |
| MsG0180004609.01 | MsG0880046444.01 | 0.821880 | 3.190982e-53 | 2.628755e-50 |
| MsG0180004622.01 | MsG0880046444.01 | 0.864913 | 8.633273e-65 | 2.756058e-61 |
| MsG0180004625.01 | MsG0880046444.01 | 0.871624 | 5.932578e-67 | 2.409320e-63 |
| MsG0180004854.01 | MsG0880046444.01 | 0.828862 | 7.098467e-55 | 7.142536e-52 |
| MsG0180005361.01 | MsG0880046444.01 | 0.874937 | 4.568548e-68 | 2.095119e-64 |
| MsG0180005366.01 | MsG0880046444.01 | 0.872009 | 4.419164e-67 | 1.819457e-63 |
| MsG0180005426.01 | MsG0880046444.01 | 0.885668 | 6.668688e-72 | 4.618209e-68 |
| MsG0180005781.01 | MsG0880046444.01 | 0.809393 | 1.935163e-50 | 1.134828e-47 |
| MsG0280006305.01 | MsG0880046444.01 | 0.804688 | 1.915331e-49 | 9.939714e-47 |
| MsG0280006424.01 | MsG0880046444.01 | 0.907123 | 7.120555e-81 | 1.244921e-76 |
| MsG0780040338.01 | MsG0880046444.01 | 0.870188 | 1.762511e-66 | 6.794692e-63 |
| MsG0780040782.01 | MsG0880046444.01 | 0.877787 | 4.746691e-69 | 2.417847e-65 |
| MsG0780040900.01 | MsG0880046444.01 | 0.930299 | 2.004315e-93 | 1.176471e-88 |
| MsG0780041147.01 | MsG0880046444.01 | 0.866078 | 3.707703e-65 | 1.233803e-61 |
| MsG0780041223.01 | MsG0880046444.01 | 0.854335 | 1.318232e-61 | 2.933896e-58 |
| MsG0780041295.01 | MsG0880046444.01 | 0.835732 | 1.414219e-56 | 1.744704e-53 |
| MsG0780041332.01 | MsG0880046444.01 | 0.873796 | 1.113658e-67 | 4.895380e-64 |
| MsG0780041461.01 | MsG0880046444.01 | 0.802405 | 5.698451e-49 | 2.789151e-46 |
| MsG0780041462.01 | MsG0880046444.01 | 0.815541 | 8.770056e-52 | 6.063704e-49 |
| MsG0780041519.01 | MsG0880046444.01 | 0.865669 | 4.994222e-65 | 1.638567e-61 |
| MsG0880041967.01 | MsG0880046444.01 | 0.878913 | 1.910310e-69 | 1.015229e-65 |
| MsG0880042125.01 | MsG0880046444.01 | 0.905124 | 5.978376e-80 | 9.534483e-76 |
| MsG0880042604.01 | MsG0880046444.01 | 0.852938 | 3.322789e-61 | 7.058540e-58 |
| MsG0880042860.01 | MsG0880046444.01 | 0.817530 | 3.144111e-52 | 2.295424e-49 |
| MsG0880043517.01 | MsG0880046444.01 | 0.841026 | 6.096947e-58 | 8.843772e-55 |
| MsG0880043770.01 | MsG0880046444.01 | 0.854633 | 1.080543e-61 | 2.428727e-58 |
| MsG0280010794.01 | MsG0880046444.01 | 0.802178 | 6.346447e-49 | 3.088177e-46 |
| MsG0280010801.01 | MsG0880046444.01 | 0.896708 | 2.845450e-76 | 3.114097e-72 |
| MsG0280010995.01 | MsG0880046444.01 | 0.826745 | 2.291448e-54 | 2.167829e-51 |
| MsG0280011037.01 | MsG0880046444.01 | 0.801040 | 1.086227e-48 | 5.135875e-46 |
| MsG0280011149.01 | MsG0880046444.01 | 0.820943 | 5.250701e-53 | 4.213559e-50 |
| MsG0280011234.01 | MsG0880046444.01 | 0.836589 | 8.563654e-57 | 1.084055e-53 |
| MsG0280011308.01 | MsG0880046444.01 | 0.804073 | 2.573795e-49 | 1.314697e-46 |
| MsG0380011643.01 | MsG0880046444.01 | 0.848136 | 7.428285e-60 | 1.349767e-56 |
| MsG0380012073.01 | MsG0880046444.01 | 0.917196 | 7.128087e-86 | 2.031896e-81 |
| MsG0680030968.01 | MsG0880046444.01 | 0.821868 | 3.210955e-53 | 2.644293e-50 |
| MsG0680031628.01 | MsG0880046444.01 | 0.809627 | 1.722990e-50 | 1.016803e-47 |
| MsG0680031763.01 | MsG0880046444.01 | 0.866442 | 2.842576e-65 | 9.581439e-62 |
| MsG0680032770.01 | MsG0880046444.01 | 0.915637 | 4.648207e-85 | 1.226938e-80 |
| MsG0680034061.01 | MsG0880046444.01 | 0.806502 | 7.973811e-50 | 4.335002e-47 |
| MsG0480018477.01 | MsG0880046444.01 | 0.883815 | 3.259246e-71 | 2.098125e-67 |
| MsG0480019632.01 | MsG0880046444.01 | 0.818770 | 1.647692e-52 | 1.244751e-49 |
| MsG0480020959.01 | MsG0880046444.01 | 0.827574 | 1.451346e-54 | 1.406534e-51 |
| MsG0480021006.01 | MsG0880046444.01 | 0.839830 | 1.253287e-57 | 1.751752e-54 |
| MsG0480021159.01 | MsG0880046444.01 | 0.837461 | 5.127652e-57 | 6.665606e-54 |
| MsG0480021393.01 | MsG0880046444.01 | 0.822521 | 2.265776e-53 | 1.901042e-50 |
| MsG0480022693.01 | MsG0880046444.01 | 0.804392 | 2.207867e-49 | 1.137020e-46 |
| MsG0480022789.01 | MsG0880046444.01 | 0.819350 | 1.216430e-52 | 9.336867e-50 |
| MsG0480023149.01 | MsG0880046444.01 | 0.902421 | 9.863451e-79 | 1.395601e-74 |
| MsG0480023399.01 | MsG0880046444.01 | 0.862912 | 3.620913e-64 | 1.078177e-60 |
| MsG0480023467.01 | MsG0880046444.01 | 0.926962 | 2.277644e-91 | 1.108840e-86 |
| MsG0480023559.01 | MsG0880046444.01 | 0.842881 | 1.971590e-58 | 3.030814e-55 |
| MsG0480023970.01 | MsG0880046444.01 | 0.857312 | 1.777994e-62 | 4.369733e-59 |
| MsG0580024369.01 | MsG0880046444.01 | 0.869913 | 2.167300e-66 | 8.273430e-63 |
| MsG0580025073.01 | MsG0880046444.01 | 0.812115 | 4.985600e-51 | 3.142359e-48 |
| MsG0580025408.01 | MsG0880046444.01 | 0.825312 | 5.020487e-54 | 4.559812e-51 |
| MsG0380015494.01 | MsG0880046444.01 | 0.806469 | 8.101644e-50 | 4.400923e-47 |
| MsG0380016389.01 | MsG0880046444.01 | 0.830828 | 2.356419e-55 | 2.511422e-52 |
| MsG0380016577.01 | MsG0880046444.01 | 0.858824 | 6.319540e-63 | 1.634206e-59 |
| MsG0380016622.01 | MsG0880046444.01 | 0.815241 | 1.022327e-51 | 7.010082e-49 |
| MsG0380016733.01 | MsG0880046444.01 | 0.883061 | 6.171033e-71 | 3.852801e-67 |
| MsG0380017382.01 | MsG0880046444.01 | 0.839568 | 1.466089e-57 | 2.032592e-54 |
| MsG0380017556.01 | MsG0880046444.01 | 0.845831 | 3.177066e-59 | 5.362906e-56 |
| MsG0480018084.01 | MsG0880046444.01 | 0.899965 | 1.174370e-77 | 1.486168e-73 |
| MsG0480018252.01 | MsG0880046444.01 | 0.868098 | 8.403178e-66 | 3.002802e-62 |
| MsG0580026157.01 | MsG0880046444.01 | 0.826399 | 2.771480e-54 | 2.596287e-51 |
| MsG0580027043.01 | MsG0880046444.01 | 0.894911 | 1.579064e-75 | 1.602034e-71 |
| MsG0580029132.01 | MsG0880046444.01 | 0.916569 | 1.522136e-85 | 4.206804e-81 |
| MsG0580029702.01 | MsG0880046444.01 | 0.818768 | 1.649864e-52 | 1.246300e-49 |
| MsG0580029703.01 | MsG0880046444.01 | 0.840063 | 1.089607e-57 | 1.534329e-54 |
| MsG0580030073.01 | MsG0880046444.01 | 0.813256 | 2.806700e-51 | 1.823733e-48 |
| MsG0280006664.01 | MsG0880046444.01 | 0.842463 | 2.546116e-58 | 3.863875e-55 |
| MsG0280006741.01 | MsG0880046444.01 | 0.848285 | 6.758227e-60 | 1.234143e-56 |
| MsG0280006819.01 | MsG0880046444.01 | 0.849178 | 3.821379e-60 | 7.184996e-57 |
| MsG0280006836.01 | MsG0880046444.01 | 0.849620 | 2.877677e-60 | 5.487754e-57 |
| MsG0280006993.01 | MsG0880046444.01 | 0.811189 | 7.927427e-51 | 4.874995e-48 |
| MsG0280007643.01 | MsG0880046444.01 | 0.804016 | 2.644603e-49 | 1.348894e-46 |
| MsG0280008118.01 | MsG0880046444.01 | 0.866626 | 2.485426e-65 | 8.433504e-62 |
| MsG0280009111.01 | MsG0880046444.01 | 0.851298 | 9.720001e-61 | 1.958675e-57 |
| MsG0280009141.01 | MsG0880046444.01 | 0.808502 | 3.001096e-50 | 1.718861e-47 |
| MsG0280009372.01 | MsG0880046444.01 | 0.860498 | 1.981568e-63 | 5.427576e-60 |
| MsG0280009375.01 | MsG0880046444.01 | 0.881770 | 1.821221e-70 | 1.080588e-66 |
| MsG0280010002.01 | MsG0880046444.01 | 0.809168 | 2.161663e-50 | 1.260105e-47 |
| MsG0280010130.01 | MsG0880046444.01 | 0.807277 | 5.468870e-50 | 3.033389e-47 |
| MsG0280010383.01 | MsG0880046444.01 | 0.821141 | 4.728030e-53 | 3.814933e-50 |
| MsG0280010495.01 | MsG0880046444.01 | 0.939156 | 2.040659e-99 | 2.061361e-94 |
| MsG0280010525.01 | MsG0880046444.01 | 0.876943 | 9.334336e-69 | 4.610254e-65 |
| MsG0680035848.01 | MsG0880046444.01 | 0.878731 | 2.215560e-69 | 1.169681e-65 |
| MsG0780036240.01 | MsG0880046444.01 | 0.834020 | 3.815400e-56 | 4.471214e-53 |
| MsG0780036547.01 | MsG0880046444.01 | 0.844519 | 7.190932e-59 | 1.163918e-55 |
| MsG0780036822.01 | MsG0880046444.01 | 0.896120 | 5.002818e-76 | 5.338587e-72 |
| MsG0780037097.01 | MsG0880046444.01 | 0.812325 | 4.488457e-51 | 2.845186e-48 |
| MsG0780038400.01 | MsG0880046444.01 | 0.873886 | 1.038872e-67 | 4.581393e-64 |
| MsG0780038587.01 | MsG0880046444.01 | 0.893029 | 9.188908e-75 | 8.610081e-71 |
| MsG0780039271.01 | MsG0880046444.01 | 0.816162 | 6.374244e-52 | 4.482733e-49 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0880046444.01 | MsG0480020375.01 | PPI |
| MsG0880046444.01 | MsG0480023805.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046444.01.T01 | MTR_4g021290 | 100.000 | 197 | 0 | 0 | 1 | 197 | 1 | 197 | 6.26e-146 | 404 |
| MsG0880046444.01.T01 | MTR_3g005450 | 100.000 | 197 | 0 | 0 | 1 | 197 | 1 | 197 | 6.26e-146 | 404 |
| MsG0880046444.01.T01 | MTR_3g005430 | 100.000 | 197 | 0 | 0 | 1 | 197 | 1 | 197 | 6.26e-146 | 404 |
| MsG0880046444.01.T01 | MTR_7g067490 | 98.985 | 197 | 2 | 0 | 1 | 197 | 1 | 197 | 3.44e-144 | 399 |
| MsG0880046444.01.T01 | MTR_1g068965 | 98.477 | 197 | 3 | 0 | 1 | 197 | 28 | 224 | 4.95e-143 | 397 |
| MsG0880046444.01.T01 | MTR_4g108310 | 98.261 | 115 | 2 | 0 | 1 | 115 | 1 | 115 | 7.57e-79 | 231 |
| MsG0880046444.01.T01 | MTR_4g108305 | 100.000 | 38 | 0 | 0 | 138 | 175 | 21 | 58 | 3.15e-22 | 85.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880046444.01.T01 | AT5G39850 | 90.909 | 187 | 17 | 0 | 1 | 187 | 1 | 187 | 2.13e-124 | 349 |
| MsG0880046444.01.T01 | AT5G15200 | 84.343 | 198 | 30 | 1 | 1 | 197 | 1 | 198 | 9.62e-118 | 332 |
| MsG0880046444.01.T01 | AT5G15200 | 89.051 | 137 | 15 | 0 | 1 | 137 | 1 | 137 | 4.15e-86 | 251 |
Find 84 sgRNAs with CRISPR-Local
Find 157 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACACACAGCATCAAGTAAA+AGG | 0.265429 | 8:+73458688 | None:intergenic |
| AATAAACAAGGATGGGAAAA+TGG | 0.279207 | 8:+73458812 | None:intergenic |
| TGATCCAACTATGCTTCTTA+TGG | 0.287832 | 8:-73458598 | MsG0880046444.01.T01:three_prime_UTR |
| CCTTTCGGTGGTGGTCTTCC+TGG | 0.299249 | 8:-73459002 | MsG0880046444.01.T01:CDS |
| ATCACCACCGGAAGCCTTCT+TGG | 0.302286 | 8:+73458947 | None:intergenic |
| TTGAAGCTGGTCGGAGAGTA+TGG | 0.314070 | 8:-73460603 | MsG0880046444.01.T01:CDS |
| GTTTCATAGGGTTGGGAGGC+AGG | 0.324677 | 8:-73459093 | MsG0880046444.01.T01:intron |
| GAACAAGCTCGATTATGTTT+TGG | 0.327341 | 8:-73460415 | MsG0880046444.01.T01:CDS |
| TTCGCTGCAAGCGCGAGCTT+TGG | 0.327479 | 8:-73460578 | MsG0880046444.01.T01:CDS |
| CAGACACTCGTCTTCAAATC+TGG | 0.346433 | 8:-73460357 | MsG0880046444.01.T01:CDS |
| ACATCCCATCCTTCATGGTT+AGG | 0.353382 | 8:-73459064 | MsG0880046444.01.T01:CDS |
| CCTTCTTGGCTGCAGCCTTA+AGG | 0.354248 | 8:+73458961 | None:intergenic |
| GCTGCAAGCGCGAGCTTTGG+AGG | 0.363662 | 8:-73460575 | MsG0880046444.01.T01:CDS |
| ACCATGCTAGGGTTCTTATC+AGG | 0.369101 | 8:-73460317 | MsG0880046444.01.T01:CDS |
| CCTCTCCTTGCCGCTGCCGC+CGG | 0.390241 | 8:+73460732 | None:intergenic |
| CAAAGTTTCGGTTGGATACA+TGG | 0.398736 | 8:+73458619 | None:intergenic |
| GCATAGTTGGATCAAAGTTT+CGG | 0.405107 | 8:+73458607 | None:intergenic |
| TGATCTTTATACAAGTTAGT+TGG | 0.405273 | 8:-73458514 | MsG0880046444.01.T01:three_prime_UTR |
| ACAAAGATCATCAAATGTAT+TGG | 0.418707 | 8:+73458721 | None:intergenic |
| TCCAAACGCTCCTTCTCATA+TGG | 0.423037 | 8:+73460633 | None:intergenic |
| GGTGAACATCCCATCCTTCA+TGG | 0.426151 | 8:-73459069 | MsG0880046444.01.T01:CDS |
| TCCATATGAGAAGGAGCGTT+TGG | 0.433604 | 8:-73460634 | MsG0880046444.01.T01:CDS |
| CATCCCATCCTTCATGGTTA+GGG | 0.434949 | 8:-73459063 | MsG0880046444.01.T01:CDS |
| TGCCGCCGGTGATGCCTACT+AGG | 0.436069 | 8:+73460746 | None:intergenic |
| GCTGCAGCCAAGAAGGCTTC+CGG | 0.439232 | 8:-73458954 | MsG0880046444.01.T01:CDS |
| TTGGATCAAAACTTAATACT+TGG | 0.442599 | 8:+73458740 | None:intergenic |
| CTGCAAGCGCGAGCTTTGGA+GGG | 0.446963 | 8:-73460574 | MsG0880046444.01.T01:CDS |
| TGTTCTGTGTCTCATCTAGA+AGG | 0.448082 | 8:+73460433 | None:intergenic |
| CTCACAAGTCCTTTCGGTGG+TGG | 0.464545 | 8:-73459011 | MsG0880046444.01.T01:CDS |
| TTATCAGGCAGAGGCACATC+AGG | 0.476066 | 8:-73460302 | MsG0880046444.01.T01:intron |
| TTCTTTCGCTTCACACGACC+AGG | 0.480028 | 8:+73458984 | None:intergenic |
| AAAGCGTTCTAGCATTGTTA+CGG | 0.481953 | 8:+73460529 | None:intergenic |
| GTAGGCATCACCGGCGGCAG+CGG | 0.492678 | 8:-73460742 | MsG0880046444.01.T01:five_prime_UTR |
| TTCTAGCATTGTTACGGATA+CGG | 0.498419 | 8:+73460535 | None:intergenic |
| CTGTGAATCAGAGATCAAAA+TGG | 0.499446 | 8:-73460709 | MsG0880046444.01.T01:exon |
| GAATCCTCGTCGGATCTTCG+AGG | 0.499570 | 8:-73460490 | MsG0880046444.01.T01:CDS |
| TACACCATAAGAAGCATAGT+TGG | 0.501489 | 8:+73458594 | None:intergenic |
| AGTTGGATCAAAGTTTCGGT+TGG | 0.502951 | 8:+73458611 | None:intergenic |
| AGTCTAGGACAGATATAAAA+CGG | 0.515542 | 8:+73458865 | None:intergenic |
| CCTTAAGGCTGCAGCCAAGA+AGG | 0.517095 | 8:-73458961 | MsG0880046444.01.T01:CDS |
| CCATCCTTGTTTATTGTGTG+AGG | 0.520499 | 8:-73458804 | MsG0880046444.01.T01:three_prime_UTR |
| CTAAGTCCATTCACCATGCT+AGG | 0.521010 | 8:-73460329 | MsG0880046444.01.T01:CDS |
| CCGGCGGCAGCGGCAAGGAG+AGG | 0.526000 | 8:-73460732 | MsG0880046444.01.T01:five_prime_UTR |
| AAGAAGGCTTCCGGTGGTGA+TGG | 0.531981 | 8:-73458945 | MsG0880046444.01.T01:CDS |
| TCATTTGTGATTAAAATGTC+AGG | 0.535564 | 8:+73458463 | None:intergenic |
| CATCACCGGCGGCAGCGGCA+AGG | 0.537265 | 8:-73460737 | MsG0880046444.01.T01:five_prime_UTR |
| AAGAACCCTAGCATGGTGAA+TGG | 0.539163 | 8:+73460323 | None:intergenic |
| CTCCTCATCACCATCACCAC+CGG | 0.544543 | 8:+73458935 | None:intergenic |
| TCAACCCTAACCATGAAGGA+TGG | 0.545370 | 8:+73459059 | None:intergenic |
| TCATTGTTACAAATTGAGGT+TGG | 0.546826 | 8:-73458390 | MsG0880046444.01.T01:three_prime_UTR |
| CCTCACACAATAAACAAGGA+TGG | 0.552644 | 8:+73458804 | None:intergenic |
| TGTGAAGCGAAAGAACCTTA+AGG | 0.553464 | 8:-73458976 | MsG0880046444.01.T01:CDS |
| TGATAGAAAATCTAAAGTCT+AGG | 0.553926 | 8:+73458850 | None:intergenic |
| TCATAGGGTTGGGAGGCAGG+TGG | 0.557165 | 8:-73459090 | MsG0880046444.01.T01:intron |
| CTCACACAATAAACAAGGAT+GGG | 0.565131 | 8:+73458805 | None:intergenic |
| TTATCAGTTCTGAAAGGCAC+AGG | 0.567178 | 8:+73458564 | None:intergenic |
| AACTATGCTTCTTATGGTGT+AGG | 0.569156 | 8:-73458592 | MsG0880046444.01.T01:three_prime_UTR |
| TGAATCAACCCTAACCATGA+AGG | 0.569890 | 8:+73459055 | None:intergenic |
| CTAGGGTTCTTATCAGGCAG+AGG | 0.571814 | 8:-73460311 | MsG0880046444.01.T01:CDS |
| CAACCCTAACCATGAAGGAT+GGG | 0.574613 | 8:+73459060 | None:intergenic |
| TCACAATTATCAGTTCTGAA+AGG | 0.576272 | 8:+73458558 | None:intergenic |
| TTTGGATGCTGAGTTGAAGC+TGG | 0.579570 | 8:-73460616 | MsG0880046444.01.T01:CDS |
| TATTGTTTCATAGGGTTGGG+AGG | 0.586042 | 8:-73459097 | MsG0880046444.01.T01:intron |
| TTCCGGTGGTGATGGTGATG+AGG | 0.588312 | 8:-73458937 | MsG0880046444.01.T01:CDS |
| GATATAAAACGGCTAGAGCA+AGG | 0.589602 | 8:+73458876 | None:intergenic |
| AATCCTCGTCGGATCTTCGA+GGG | 0.591722 | 8:-73460489 | MsG0880046444.01.T01:CDS |
| AAAGTTTCGGTTGGATACAT+GGG | 0.591867 | 8:+73458620 | None:intergenic |
| TTGAGGAGGATGTTTAAGCA+TGG | 0.593185 | 8:-73460456 | MsG0880046444.01.T01:CDS |
| GCCTCGTCGTCCATATGAGA+AGG | 0.595822 | 8:-73460643 | MsG0880046444.01.T01:CDS |
| TAAGTCCATTCACCATGCTA+GGG | 0.602951 | 8:-73460328 | MsG0880046444.01.T01:CDS |
| TCACTCACAAGTCCTTTCGG+TGG | 0.620110 | 8:-73459014 | MsG0880046444.01.T01:CDS |
| ACTCGTCTTCAAATCTGGCA+TGG | 0.621528 | 8:-73460352 | MsG0880046444.01.T01:CDS |
| GCAGCCAAGAAGGCTTCCGG+TGG | 0.625260 | 8:-73458951 | MsG0880046444.01.T01:CDS |
| AACTTGTATAAAGATCAAGC+AGG | 0.637230 | 8:+73458520 | None:intergenic |
| GATGCTGAGTTGAAGCTGGT+CGG | 0.640820 | 8:-73460612 | MsG0880046444.01.T01:CDS |
| CCAGGAAGACCACCACCGAA+AGG | 0.644057 | 8:+73459002 | None:intergenic |
| CGGTGGTGATGGTGATGAGG+AGG | 0.644753 | 8:-73458934 | MsG0880046444.01.T01:CDS |
| GCCTGATAAGAACCCTAGCA+TGG | 0.650504 | 8:+73460316 | None:intergenic |
| ATTTCCTCACACAATAAACA+AGG | 0.669010 | 8:+73458800 | None:intergenic |
| TTTGTGATTAAAATGTCAGG+TGG | 0.686722 | 8:+73458466 | None:intergenic |
| TCCTTCTCATATGGACGACG+AGG | 0.694526 | 8:+73460642 | None:intergenic |
| TGGATGAGAAGAATCCTCGT+CGG | 0.703960 | 8:-73460500 | MsG0880046444.01.T01:CDS |
| AACCTAGTAGGCATCACCGG+CGG | 0.714986 | 8:-73460748 | MsG0880046444.01.T01:five_prime_UTR |
| TCACCCTCGAAGATCCGACG+AGG | 0.762913 | 8:+73460486 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAGGATAAAAT+TGG | + | Chr8:73459983-73460002 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAGGATAAAATT+GGG | + | Chr8:73459982-73460001 | None:intergenic | 10.0% |
| !! | AAATAATTCAATGTAATTAT+AGG | + | Chr8:73459193-73459212 | None:intergenic | 10.0% |
| !! | AAATAGAAAGAAAAAAAAAA+AGG | + | Chr8:73459993-73460012 | None:intergenic | 10.0% |
| !! | AAAAAAAAAGGATAAAATTG+GGG | + | Chr8:73459981-73460000 | None:intergenic | 15.0% |
| !! | GAGTTCAAAAAAAAAAAAAA+AGG | - | Chr8:73459589-73459608 | MsG0880046444.01.T01:intron | 15.0% |
| !! | TAGTATTAATGAAATATGTT+TGG | - | Chr8:73460012-73460031 | MsG0880046444.01.T01:intron | 15.0% |
| !!! | TGAATTAATCTGATTTTTTA+TGG | - | Chr8:73458924-73458943 | MsG0880046444.01.T01:CDS | 15.0% |
| !!! | TTTTTTTTTTTTTGAACTCT+CGG | + | Chr8:73459588-73459607 | None:intergenic | 15.0% |
| !! | CAAAACATGTATTGAATTAA+AGG | + | Chr8:73459665-73459684 | None:intergenic | 20.0% |
| !! | GCAAATGAAAAATATAATTG+AGG | + | Chr8:73459943-73459962 | None:intergenic | 20.0% |
| !! | TAATGAAATATGTTTGGATA+TGG | - | Chr8:73460018-73460037 | MsG0880046444.01.T01:intron | 20.0% |
| !! | TCAGATTAATTCATCATTAA+CGG | + | Chr8:73458917-73458936 | None:intergenic | 20.0% |
| !!! | AATGTCATTTATTGTTTCAT+AGG | - | Chr8:73460046-73460065 | MsG0880046444.01.T01:intron | 20.0% |
| !!! | AATGTTTTTCAAAATGATAC+AGG | + | Chr8:73459426-73459445 | None:intergenic | 20.0% |
| !!! | ATGTCATTTATTGTTTCATA+GGG | - | Chr8:73460047-73460066 | MsG0880046444.01.T01:intron | 20.0% |
| !!! | ATGTTTTTCAAAATGATACA+GGG | + | Chr8:73459425-73459444 | None:intergenic | 20.0% |
| !!! | TTTGATATTGCATATTTTGA+TGG | - | Chr8:73460505-73460524 | MsG0880046444.01.T01:CDS | 20.0% |
| ! | ACAAAGATCATCAAATGTAT+TGG | + | Chr8:73460434-73460453 | None:intergenic | 25.0% |
| ! | ATTTATTGTTTCATAGGGTT+GGG | - | Chr8:73460052-73460071 | MsG0880046444.01.T01:intron | 25.0% |
| ! | GGCTTATTTGAACATATATT+TGG | + | Chr8:73459390-73459409 | None:intergenic | 25.0% |
| ! | TCATTTGTGATTAAAATGTC+AGG | + | Chr8:73460692-73460711 | None:intergenic | 25.0% |
| ! | TGATCTTTATACAAGTTAGT+TGG | - | Chr8:73460638-73460657 | MsG0880046444.01.T01:CDS | 25.0% |
| ! | TTGGATCAAAACTTAATACT+TGG | + | Chr8:73460415-73460434 | None:intergenic | 25.0% |
| !! | AAAAGGAAAGTATATCTAGA+AGG | - | Chr8:73459606-73459625 | MsG0880046444.01.T01:intron | 25.0% |
| !! | CTATAAAGAAAATTAGCTTG+TGG | + | Chr8:73459104-73459123 | None:intergenic | 25.0% |
| !! | CTTTTCATTGTTACAAATTG+AGG | - | Chr8:73460758-73460777 | MsG0880046444.01.T01:five_prime_UTR | 25.0% |
| !! | TGATAGAAAATCTAAAGTCT+AGG | + | Chr8:73460305-73460324 | None:intergenic | 25.0% |
| AAAGAGTTACAAGCAGTTAT+GGG | + | Chr8:73459698-73459717 | None:intergenic | 30.0% | |
| AACTTGTATAAAGATCAAGC+AGG | + | Chr8:73460635-73460654 | None:intergenic | 30.0% | |
| AAGTAGAGATCATCAAGTAA+TGG | - | Chr8:73459790-73459809 | MsG0880046444.01.T01:intron | 30.0% | |
| AATAAACAAGGATGGGAAAA+TGG | + | Chr8:73460343-73460362 | None:intergenic | 30.0% | |
| ACACTAACAAGTATAGTGTT+AGG | + | Chr8:73459865-73459884 | None:intergenic | 30.0% | |
| AGTGCGAAAGCAATTATAAT+AGG | + | Chr8:73459035-73459054 | None:intergenic | 30.0% | |
| ATTTCCTCACACAATAAACA+AGG | + | Chr8:73460355-73460374 | None:intergenic | 30.0% | |
| CATTTATTGTTTCATAGGGT+TGG | - | Chr8:73460051-73460070 | MsG0880046444.01.T01:intron | 30.0% | |
| TCATTGTTACAAATTGAGGT+TGG | - | Chr8:73460762-73460781 | MsG0880046444.01.T01:five_prime_UTR | 30.0% | |
| TCTATTTACTTACCTCTGAA+TGG | - | Chr8:73459915-73459934 | MsG0880046444.01.T01:intron | 30.0% | |
| TTTGTGATTAAAATGTCAGG+TGG | + | Chr8:73460689-73460708 | None:intergenic | 30.0% | |
| ! | AGTCTAGGACAGATATAAAA+CGG | + | Chr8:73460290-73460309 | None:intergenic | 30.0% |
| ! | ATATCTAGAAGGAAGTATAC+AGG | - | Chr8:73459617-73459636 | MsG0880046444.01.T01:intron | 30.0% |
| ! | TGCTGATCTATTTGTTAGTT+TGG | - | Chr8:73458970-73458989 | MsG0880046444.01.T01:CDS | 30.0% |
| ! | TTTACTTGCATCTTTTGTAG+TGG | - | Chr8:73459719-73459738 | MsG0880046444.01.T01:intron | 30.0% |
| !! | TCACAATTATCAGTTCTGAA+AGG | + | Chr8:73460597-73460616 | None:intergenic | 30.0% |
| !! | TTCATTTGCTGTATGCTTAT+GGG | - | Chr8:73459954-73459973 | MsG0880046444.01.T01:intron | 30.0% |
| !! | TTTCATTTGCTGTATGCTTA+TGG | - | Chr8:73459953-73459972 | MsG0880046444.01.T01:intron | 30.0% |
| !!! | TTTTTTTTTTGAACTCTCGG+AGG | + | Chr8:73459585-73459604 | None:intergenic | 30.0% |
| AAAGTTTCGGTTGGATACAT+GGG | + | Chr8:73460535-73460554 | None:intergenic | 35.0% | |
| AACTATGCTTCTTATGGTGT+AGG | - | Chr8:73460560-73460579 | MsG0880046444.01.T01:CDS | 35.0% | |
| AAGAGTTACAAGCAGTTATG+GGG | + | Chr8:73459697-73459716 | None:intergenic | 35.0% | |
| AATAAGCTGCTTATCCAATC+AGG | + | Chr8:73459064-73459083 | None:intergenic | 35.0% | |
| AATTACACATTTCCGAACCA+TGG | + | Chr8:73459828-73459847 | None:intergenic | 35.0% | |
| ATAATTGAGGATCCATTCAG+AGG | + | Chr8:73459930-73459949 | None:intergenic | 35.0% | |
| CTCACACAATAAACAAGGAT+GGG | + | Chr8:73460350-73460369 | None:intergenic | 35.0% | |
| CTGTGAATCAGAGATCAAAA+TGG | - | Chr8:73458443-73458462 | MsG0880046444.01.T01:three_prime_UTR | 35.0% | |
| GAAAGAGTTACAAGCAGTTA+TGG | + | Chr8:73459699-73459718 | None:intergenic | 35.0% | |
| GCATAGTTGGATCAAAGTTT+CGG | + | Chr8:73460548-73460567 | None:intergenic | 35.0% | |
| GTAGATCTTGGTTAGATCAT+TGG | - | Chr8:73459488-73459507 | MsG0880046444.01.T01:intron | 35.0% | |
| TACACACAGCATCAAGTAAA+AGG | + | Chr8:73460467-73460486 | None:intergenic | 35.0% | |
| TAGAGATCATCAAGTAATGG+AGG | - | Chr8:73459793-73459812 | MsG0880046444.01.T01:intron | 35.0% | |
| TATAATTGCTTTCGCACTGT+TGG | - | Chr8:73459037-73459056 | MsG0880046444.01.T01:CDS | 35.0% | |
| TATGAAGTACGAAATCTCCT+CGG | - | Chr8:73459129-73459148 | MsG0880046444.01.T01:intron | 35.0% | |
| TCAAATAAGCCAATCCAAAC+AGG | - | Chr8:73459399-73459418 | MsG0880046444.01.T01:intron | 35.0% | |
| TGATCCAACTATGCTTCTTA+TGG | - | Chr8:73460554-73460573 | MsG0880046444.01.T01:CDS | 35.0% | |
| TGGTTGTCTGTAACAATGTT+GGG | - | Chr8:73459508-73459527 | MsG0880046444.01.T01:intron | 35.0% | |
| TTCTAGCATTGTTACGGATA+CGG | + | Chr8:73458620-73458639 | None:intergenic | 35.0% | |
| TTGGTTGTCTGTAACAATGT+TGG | - | Chr8:73459507-73459526 | MsG0880046444.01.T01:intron | 35.0% | |
| TTGTTGTGTGATGTAGATCT+TGG | - | Chr8:73459476-73459495 | MsG0880046444.01.T01:intron | 35.0% | |
| ! | AAAGCGTTCTAGCATTGTTA+CGG | + | Chr8:73458626-73458645 | None:intergenic | 35.0% |
| ! | GAACAAGCTCGATTATGTTT+TGG | - | Chr8:73458737-73458756 | MsG0880046444.01.T01:three_prime_UTR | 35.0% |
| ! | GTTGCGTTTTATCGAAACTA+CGG | - | Chr8:73458471-73458490 | MsG0880046444.01.T01:three_prime_UTR | 35.0% |
| ! | TACACCATAAGAAGCATAGT+TGG | + | Chr8:73460561-73460580 | None:intergenic | 35.0% |
| ! | TTTTCACTCACAAGTCCTTT+CGG | - | Chr8:73460135-73460154 | MsG0880046444.01.T01:intron | 35.0% |
| !! | TATAGGTTTAGTGTCGATGT+CGG | + | Chr8:73459176-73459195 | None:intergenic | 35.0% |
| AAAAACCTAGTAGGCATCAC+CGG | - | Chr8:73458401-73458420 | MsG0880046444.01.T01:three_prime_UTR | 40.0% | |
| AAAATGATACAGGGCCTGTT+TGG | + | Chr8:73459416-73459435 | None:intergenic | 40.0% | |
| ACATTTCCGAACCATGGTAA+AGG | + | Chr8:73459822-73459841 | None:intergenic | 40.0% | |
| AGTTGGATCAAAGTTTCGGT+TGG | + | Chr8:73460544-73460563 | None:intergenic | 40.0% | |
| CAAAGTTTCGGTTGGATACA+TGG | + | Chr8:73460536-73460555 | None:intergenic | 40.0% | |
| CCTCACACAATAAACAAGGA+TGG | + | Chr8:73460351-73460370 | None:intergenic | 40.0% | |
| GATATAAAACGGCTAGAGCA+AGG | + | Chr8:73460279-73460298 | None:intergenic | 40.0% | |
| TAAGTCCATTCACCATGCTA+GGG | - | Chr8:73458824-73458843 | MsG0880046444.01.T01:three_prime_UTR | 40.0% | |
| TATTGTTTCATAGGGTTGGG+AGG | - | Chr8:73460055-73460074 | MsG0880046444.01.T01:intron | 40.0% | |
| TGAATCAACCCTAACCATGA+AGG | + | Chr8:73460100-73460119 | None:intergenic | 40.0% | |
| TGTGAAGCGAAAGAACCTTA+AGG | - | Chr8:73460176-73460195 | MsG0880046444.01.T01:intron | 40.0% | |
| TGTTCTGTGTCTCATCTAGA+AGG | + | Chr8:73458722-73458741 | None:intergenic | 40.0% | |
| TTATGTGTCCAGTGTAGTGT+CGG | - | Chr8:73459228-73459247 | MsG0880046444.01.T01:intron | 40.0% | |
| TTGAGGAGGATGTTTAAGCA+TGG | - | Chr8:73458696-73458715 | MsG0880046444.01.T01:three_prime_UTR | 40.0% | |
| ! | CCATCCTTGTTTATTGTGTG+AGG | - | Chr8:73460348-73460367 | MsG0880046444.01.T01:CDS | 40.0% |
| !! | TTATCAGTTCTGAAAGGCAC+AGG | + | Chr8:73460591-73460610 | None:intergenic | 40.0% |
| !!! | CCTACTAGGTTTTTGGTTGT+GGG | + | Chr8:73458395-73458414 | None:intergenic | 40.0% |
| AAGAACCCTAGCATGGTGAA+TGG | + | Chr8:73458832-73458851 | None:intergenic | 45.0% | |
| AATGGAGGTCTCCTTTACCA+TGG | - | Chr8:73459808-73459827 | MsG0880046444.01.T01:intron | 45.0% | |
| ACATCCCATCCTTCATGGTT+AGG | - | Chr8:73460088-73460107 | MsG0880046444.01.T01:intron | 45.0% | |
| ACCATGCTAGGGTTCTTATC+AGG | - | Chr8:73458835-73458854 | MsG0880046444.01.T01:three_prime_UTR | 45.0% | |
| ACTCGTCTTCAAATCTGGCA+TGG | - | Chr8:73458800-73458819 | MsG0880046444.01.T01:three_prime_UTR | 45.0% | |
| AGGTCTCCTTTACCATGGTT+CGG | - | Chr8:73459813-73459832 | MsG0880046444.01.T01:intron | 45.0% | |
| CAACCCTAACCATGAAGGAT+GGG | + | Chr8:73460095-73460114 | None:intergenic | 45.0% | |
| CAGACACTCGTCTTCAAATC+TGG | - | Chr8:73458795-73458814 | MsG0880046444.01.T01:three_prime_UTR | 45.0% | |
| CATCCCATCCTTCATGGTTA+GGG | - | Chr8:73460089-73460108 | MsG0880046444.01.T01:intron | 45.0% | |
| CCCACAACCAAAAACCTAGT+AGG | - | Chr8:73458392-73458411 | MsG0880046444.01.T01:three_prime_UTR | 45.0% | |
| CTAAGTCCATTCACCATGCT+AGG | - | Chr8:73458823-73458842 | MsG0880046444.01.T01:three_prime_UTR | 45.0% | |
| GTACGAAATCTCCTCGGATT+AGG | - | Chr8:73459135-73459154 | MsG0880046444.01.T01:intron | 45.0% | |
| TCAACCCTAACCATGAAGGA+TGG | + | Chr8:73460096-73460115 | None:intergenic | 45.0% | |
| TCCAAACGCTCCTTCTCATA+TGG | + | Chr8:73458522-73458541 | None:intergenic | 45.0% | |
| TGGATGAGAAGAATCCTCGT+CGG | - | Chr8:73458652-73458671 | MsG0880046444.01.T01:three_prime_UTR | 45.0% | |
| ! | GGTGATGCCTACTAGGTTTT+TGG | + | Chr8:73458402-73458421 | None:intergenic | 45.0% |
| ! | TGCTAGAACGCTTTTGACAC+TGG | - | Chr8:73458632-73458651 | MsG0880046444.01.T01:three_prime_UTR | 45.0% |
| ! | TTTGGATGCTGAGTTGAAGC+TGG | - | Chr8:73458536-73458555 | MsG0880046444.01.T01:three_prime_UTR | 45.0% |
| !! | TAGTGTCGGTGCTTCATAGA+TGG | - | Chr8:73459242-73459261 | MsG0880046444.01.T01:intron | 45.0% |
| !! | TCCATATGAGAAGGAGCGTT+TGG | - | Chr8:73458518-73458537 | MsG0880046444.01.T01:three_prime_UTR | 45.0% |
| !!! | GCCTACTAGGTTTTTGGTTG+TGG | + | Chr8:73458396-73458415 | None:intergenic | 45.0% |
| AATCCTCGTCGGATCTTCGA+GGG | - | Chr8:73458663-73458682 | MsG0880046444.01.T01:three_prime_UTR | 50.0% | |
| CTAGGGTTCTTATCAGGCAG+AGG | - | Chr8:73458841-73458860 | MsG0880046444.01.T01:three_prime_UTR | 50.0% | |
| GATACAGGGCCTGTTTGGAT+TGG | + | Chr8:73459411-73459430 | None:intergenic | 50.0% | |
| GCCTGATAAGAACCCTAGCA+TGG | + | Chr8:73458839-73458858 | None:intergenic | 50.0% | |
| GGTGAACATCCCATCCTTCA+TGG | - | Chr8:73460083-73460102 | MsG0880046444.01.T01:intron | 50.0% | |
| TCACTCACAAGTCCTTTCGG+TGG | - | Chr8:73460138-73460157 | MsG0880046444.01.T01:intron | 50.0% | |
| TCCTTCTCATATGGACGACG+AGG | + | Chr8:73458513-73458532 | None:intergenic | 50.0% | |
| TTCGCACTGTTGGTCCTGAT+TGG | - | Chr8:73459047-73459066 | MsG0880046444.01.T01:CDS | 50.0% | |
| TTCTTTCGCTTCACACGACC+AGG | + | Chr8:73460171-73460190 | None:intergenic | 50.0% | |
| TTGAAGCTGGTCGGAGAGTA+TGG | - | Chr8:73458549-73458568 | MsG0880046444.01.T01:three_prime_UTR | 50.0% | |
| ! | GATGCTGAGTTGAAGCTGGT+CGG | - | Chr8:73458540-73458559 | MsG0880046444.01.T01:three_prime_UTR | 50.0% |
| ! | TCGAGGGTGAAGCTCTTTTG+AGG | - | Chr8:73458679-73458698 | MsG0880046444.01.T01:three_prime_UTR | 50.0% |
| ! | TTATCAGGCAGAGGCACATC+AGG | - | Chr8:73458850-73458869 | MsG0880046444.01.T01:three_prime_UTR | 50.0% |
| !! | AGGGTGAAGCTCTTTTGAGG+AGG | - | Chr8:73458682-73458701 | MsG0880046444.01.T01:three_prime_UTR | 50.0% |
| !! | ATGAAGCACCGACACTACAC+TGG | + | Chr8:73459239-73459258 | None:intergenic | 50.0% |
| !! | TTAGTGTCGATGTCGGACAC+CGG | + | Chr8:73459169-73459188 | None:intergenic | 50.0% |
| AACCTAGTAGGCATCACCGG+CGG | - | Chr8:73458404-73458423 | MsG0880046444.01.T01:three_prime_UTR | 55.0% | |
| AAGAAGGCTTCCGGTGGTGA+TGG | - | Chr8:73460207-73460226 | MsG0880046444.01.T01:intron | 55.0% | |
| ATCACCACCGGAAGCCTTCT+TGG | + | Chr8:73460208-73460227 | None:intergenic | 55.0% | |
| CCTTAAGGCTGCAGCCAAGA+AGG | - | Chr8:73460191-73460210 | MsG0880046444.01.T01:intron | 55.0% | |
| CCTTCTTGGCTGCAGCCTTA+AGG | + | Chr8:73460194-73460213 | None:intergenic | 55.0% | |
| CTCACAAGTCCTTTCGGTGG+TGG | - | Chr8:73460141-73460160 | MsG0880046444.01.T01:intron | 55.0% | |
| CTCCTCATCACCATCACCAC+CGG | + | Chr8:73460220-73460239 | None:intergenic | 55.0% | |
| GAATCCTCGTCGGATCTTCG+AGG | - | Chr8:73458662-73458681 | MsG0880046444.01.T01:three_prime_UTR | 55.0% | |
| GCCTCGTCGTCCATATGAGA+AGG | - | Chr8:73458509-73458528 | MsG0880046444.01.T01:three_prime_UTR | 55.0% | |
| GTTTCATAGGGTTGGGAGGC+AGG | - | Chr8:73460059-73460078 | MsG0880046444.01.T01:intron | 55.0% | |
| ! | CTCGGATTAGGTGTGTGTCC+CGG | - | Chr8:73459147-73459166 | MsG0880046444.01.T01:intron | 55.0% |
| !! | TAGTGTCGATGTCGGACACC+GGG | + | Chr8:73459168-73459187 | None:intergenic | 55.0% |
| !! | TTCCGGTGGTGATGGTGATG+AGG | - | Chr8:73460215-73460234 | MsG0880046444.01.T01:intron | 55.0% |
| CCAGGAAGACCACCACCGAA+AGG | + | Chr8:73460153-73460172 | None:intergenic | 60.0% | |
| CGGGACACACACCTAATCCG+AGG | + | Chr8:73459149-73459168 | None:intergenic | 60.0% | |
| GCTGCAGCCAAGAAGGCTTC+CGG | - | Chr8:73460198-73460217 | MsG0880046444.01.T01:intron | 60.0% | |
| TCACCCTCGAAGATCCGACG+AGG | + | Chr8:73458669-73458688 | None:intergenic | 60.0% | |
| TCATAGGGTTGGGAGGCAGG+TGG | - | Chr8:73460062-73460081 | MsG0880046444.01.T01:intron | 60.0% | |
| TTCGCTGCAAGCGCGAGCTT+TGG | - | Chr8:73458574-73458593 | MsG0880046444.01.T01:three_prime_UTR | 60.0% | |
| ! | CCTTTCGGTGGTGGTCTTCC+TGG | - | Chr8:73460150-73460169 | MsG0880046444.01.T01:intron | 60.0% |
| !! | CGGTGGTGATGGTGATGAGG+AGG | - | Chr8:73460218-73460237 | MsG0880046444.01.T01:intron | 60.0% |
| !! | CTGCAAGCGCGAGCTTTGGA+GGG | - | Chr8:73458578-73458597 | MsG0880046444.01.T01:three_prime_UTR | 60.0% |
| GCAGCCAAGAAGGCTTCCGG+TGG | - | Chr8:73460201-73460220 | MsG0880046444.01.T01:intron | 65.0% | |
| TGCCGCCGGTGATGCCTACT+AGG | + | Chr8:73458409-73458428 | None:intergenic | 65.0% | |
| ! | GCTGCAAGCGCGAGCTTTGG+AGG | - | Chr8:73458577-73458596 | MsG0880046444.01.T01:three_prime_UTR | 65.0% |
| GTAGGCATCACCGGCGGCAG+CGG | - | Chr8:73458410-73458429 | MsG0880046444.01.T01:three_prime_UTR | 70.0% | |
| CATCACCGGCGGCAGCGGCA+AGG | - | Chr8:73458415-73458434 | MsG0880046444.01.T01:three_prime_UTR | 75.0% | |
| CCTCTCCTTGCCGCTGCCGC+CGG | + | Chr8:73458423-73458442 | None:intergenic | 75.0% | |
| ! | CCGGCGGCAGCGGCAAGGAG+AGG | - | Chr8:73458420-73458439 | MsG0880046444.01.T01:three_prime_UTR | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 73458385 | 73460789 | 73458385 | ID=MsG0880046444.01;Name=MsG0880046444.01 |
| Chr8 | mRNA | 73458385 | 73460789 | 73458385 | ID=MsG0880046444.01.T01;Parent=MsG0880046444.01;Name=MsG0880046444.01.T01;_AED=0.49;_eAED=0.49;_QI=77|1|1|1|1|1|2|538|197 |
| Chr8 | exon | 73458385 | 73459106 | 73458385 | ID=MsG0880046444.01.T01:exon:11762;Parent=MsG0880046444.01.T01 |
| Chr8 | exon | 73460303 | 73460789 | 73460303 | ID=MsG0880046444.01.T01:exon:11761;Parent=MsG0880046444.01.T01 |
| Chr8 | five_prime_UTR | 73460713 | 73460789 | 73460713 | ID=MsG0880046444.01.T01:five_prime_utr;Parent=MsG0880046444.01.T01 |
| Chr8 | CDS | 73460303 | 73460712 | 73460303 | ID=MsG0880046444.01.T01:cds;Parent=MsG0880046444.01.T01 |
| Chr8 | CDS | 73458923 | 73459106 | 73458923 | ID=MsG0880046444.01.T01:cds;Parent=MsG0880046444.01.T01 |
| Chr8 | three_prime_UTR | 73458385 | 73458922 | 73458385 | ID=MsG0880046444.01.T01:three_prime_utr;Parent=MsG0880046444.01.T01 |
| Gene Sequence |
| Protein sequence |
