AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380015533.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015533.01.T01 MTR_3g072010 89.032 155 9 2 36 182 1 155 4.05e-95 273
MsG0380015533.01.T01 MTR_7g071210 55.056 89 32 3 101 181 12 100 2.34e-25 94.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380015533.01.T01 AT5G05360 38.411 151 67 5 51 179 17 163 2.27e-28 103
MsG0380015533.01.T01 AT5G05360 36.957 138 61 5 51 166 17 150 1.27e-22 89.0
MsG0380015533.01.T01 AT2G38450 50.617 81 32 1 102 174 55 135 9.31e-21 84.0

Find 57 sgRNAs with CRISPR-Local

Find 355 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTTGTCTCACCTCTGAAA+TGG 0.308162 3:+71520510 None:intergenic
AGTGCGGTCTTGTTGTTTCT+TGG 0.314826 3:+71519073 None:intergenic
GATACGGGTTGGGTTTGTTT+TGG 0.339121 3:+71519125 None:intergenic
TCCACAGGCTCCACCTTCTT+CGG 0.351408 3:+71519029 None:intergenic
ATTTGTCTCACCTCTGAAAT+GGG 0.384406 3:+71520511 None:intergenic
CTTTCCAGTCAAGTTCTTGT+TGG 0.400775 3:-71518921 MsG0380015533.01.T01:CDS
TGTTGGTCAATGTATTGCTC+TGG 0.404698 3:-71518904 MsG0380015533.01.T01:CDS
TCAATGTATTGCTCTGGATA+TGG 0.406799 3:-71518898 MsG0380015533.01.T01:intron
CAAGAAGTCGAAATTCAGTT+TGG 0.410256 3:-71517614 MsG0380015533.01.T01:CDS
GTGGTTTCACGATACGCTTA+AGG 0.417498 3:-71518961 MsG0380015533.01.T01:CDS
ATGCTTGAGTCCTCGCCGTT+TGG 0.423612 3:-71520547 MsG0380015533.01.T01:CDS
ACTGGAAAGATCCCCACGTT+TGG 0.427172 3:+71518935 None:intergenic
CTGGTTCAATGATACGGGTT+GGG 0.430102 3:+71519115 None:intergenic
ATGAAATGAGAAGATGAAAC+TGG 0.437956 3:+71519243 None:intergenic
CAATGCAGCAAACTCATAGA+AGG 0.439012 3:+71515246 None:intergenic
TGGTTCGTGCAGCGATGAAC+TGG 0.442996 3:+71519096 None:intergenic
AAACTCGAATAGCTCTTTCC+AGG 0.469121 3:-71519007 MsG0380015533.01.T01:CDS
TGATTCGGATTCAAGTGAAA+TGG 0.478803 3:-71517473 MsG0380015533.01.T01:CDS
TTGACCAACAAGAACTTGAC+TGG 0.490723 3:+71518917 None:intergenic
GTATCCTTAACTCTCTTCAT+CGG 0.497537 3:-71515326 MsG0380015533.01.T01:three_prime_UTR
GGTGGAATCGCCACCGAAGA+AGG 0.500729 3:-71519042 MsG0380015533.01.T01:CDS
ACAAGACCGCACTGCTGCTA+AGG 0.501373 3:-71519063 MsG0380015533.01.T01:CDS
TACTTAGTTTGTAAGTATGA+AGG 0.501423 3:-71517437 MsG0380015533.01.T01:intron
AGGTTATAGAGCAAGTGATT+CGG 0.501656 3:-71517488 MsG0380015533.01.T01:CDS
TATCCTTAACTCTCTTCATC+GGG 0.513073 3:-71515325 MsG0380015533.01.T01:three_prime_UTR
GATGAACTGGTTCAATGATA+CGG 0.513998 3:+71519109 None:intergenic
CCGCCCGATGAAGAGAGTTA+AGG 0.516752 3:+71515322 None:intergenic
GCGGTCTTGTTGTTTCTTGG+TGG 0.525060 3:+71519076 None:intergenic
TTCTTGTCGCACAGAGTCAA+AGG 0.533961 3:+71519187 None:intergenic
AAACCACCGATGAGTGCAAT+CGG 0.533991 3:+71518977 None:intergenic
ATGAACTGGTTCAATGATAC+GGG 0.546395 3:+71519110 None:intergenic
CGCTTAAGGAGGCCAAACGT+GGG 0.554828 3:-71518947 MsG0380015533.01.T01:CDS
ACGCTTAAGGAGGCCAAACG+TGG 0.562570 3:-71518948 MsG0380015533.01.T01:CDS
ACTGGTTCAATGATACGGGT+TGG 0.564172 3:+71519114 None:intergenic
GGGTAGTTCAACTTGCCAAA+CGG 0.566289 3:+71520532 None:intergenic
TGGTTGCCGATTGCACTCAT+CGG 0.567470 3:-71518983 MsG0380015533.01.T01:CDS
AGACCGCACTGCTGCTAAGG+TGG 0.569841 3:-71519060 MsG0380015533.01.T01:CDS
ACCGAAGAAGGTGGAGCCTG+TGG 0.570187 3:-71519030 MsG0380015533.01.T01:CDS
ACAGGCTCCACCTTCTTCGG+TGG 0.573283 3:+71519032 None:intergenic
AGAGCTATTCGAGTTTCCAC+AGG 0.573631 3:+71519014 None:intergenic
TGTAAGTAGCTGTGTTGCAA+TGG 0.582459 3:-71515127 MsG0380015533.01.T01:three_prime_UTR
AGTGCAATCGGCAACCACCC+TGG 0.583008 3:+71518989 None:intergenic
TCACTGCCTTGTTAATGAAG+AGG 0.589496 3:-71515281 MsG0380015533.01.T01:three_prime_UTR
TTGCCGATTGCACTCATCGG+TGG 0.591814 3:-71518980 MsG0380015533.01.T01:CDS
AACTCGAATAGCTCTTTCCA+GGG 0.616905 3:-71519006 MsG0380015533.01.T01:CDS
TTCGGATTCAAGTGAAATGG+AGG 0.617025 3:-71517470 MsG0380015533.01.T01:CDS
GTTGAACTACCCCATTTCAG+AGG 0.618710 3:-71520521 MsG0380015533.01.T01:intron
ACACTTCCTCTTCATTAACA+AGG 0.623259 3:+71515275 None:intergenic
GGAATCGCCACCGAAGAAGG+TGG 0.624182 3:-71519039 MsG0380015533.01.T01:CDS
TGTGTTTATAGGGACATGCA+TGG 0.630942 3:-71517650 MsG0380015533.01.T01:intron
GTTTCACGATACGCTTAAGG+AGG 0.639685 3:-71518958 MsG0380015533.01.T01:CDS
CCTTAACTCTCTTCATCGGG+CGG 0.646767 3:-71515322 MsG0380015533.01.T01:three_prime_UTR
GCTTAAGGAGGCCAAACGTG+GGG 0.679928 3:-71518946 MsG0380015533.01.T01:CDS
TTTGTCTCACCTCTGAAATG+GGG 0.688532 3:+71520512 None:intergenic
GTTCAACTTGCCAAACGGCG+AGG 0.691493 3:+71520537 None:intergenic
TCGAATAGCTCTTTCCAGGG+TGG 0.692357 3:-71519003 MsG0380015533.01.T01:CDS
ATTCCACCTTAGCAGCAGTG+CGG 0.709105 3:+71519057 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAGAATTTTTTTAGAATTA+GGG + Chr3:71515749-71515768 None:intergenic 10.0%
!!! TTTAGAATTTTTTTAGAATT+AGG + Chr3:71515750-71515769 None:intergenic 10.0%
!!! TTTAGATTTTGTTTAAATTT+TGG + Chr3:71515859-71515878 None:intergenic 10.0%
!! ATATTCTTTATCATATAGAA+TGG + Chr3:71518284-71518303 None:intergenic 15.0%
!! CATTATTAGAAATATAAATC+AGG + Chr3:71520168-71520187 None:intergenic 15.0%
!!! AAAATACCATTTTTTCTATA+AGG - Chr3:71519791-71519810 MsG0380015533.01.T01:intron 15.0%
!!! ATAGAAAAAATGGTATTTTT+AGG + Chr3:71519790-71519809 None:intergenic 15.0%
!!! TTATTATATGCTCTAAATAA+TGG - Chr3:71518557-71518576 MsG0380015533.01.T01:intron 15.0%
!! AAAAGAATGACGTATATTAT+TGG - Chr3:71519937-71519956 MsG0380015533.01.T01:intron 20.0%
!! AAACAAAATAAGAAACAATC+AGG + Chr3:71518123-71518142 None:intergenic 20.0%
!! AACCATTTAGTATAACTAAA+TGG - Chr3:71519836-71519855 MsG0380015533.01.T01:intron 20.0%
!! AATACCATCAAAATATGAAT+TGG - Chr3:71519350-71519369 MsG0380015533.01.T01:intron 20.0%
!! ACTCAACAATTATAACAAAA+AGG + Chr3:71517328-71517347 None:intergenic 20.0%
!! ATGAGCATAATAAATATACA+AGG + Chr3:71518480-71518499 None:intergenic 20.0%
!! ATTATAACAAAAAGGGTTAT+AGG + Chr3:71517320-71517339 None:intergenic 20.0%
!! ATTGACGGTAAAATATTATA+CGG + Chr3:71517813-71517832 None:intergenic 20.0%
!! CTAATTCCTTATAGAAAAAA+TGG + Chr3:71519800-71519819 None:intergenic 20.0%
!! CTCAACAATTATAACAAAAA+GGG + Chr3:71517327-71517346 None:intergenic 20.0%
!! TAGTATAATTCTCAATTCTT+TGG - Chr3:71518631-71518650 MsG0380015533.01.T01:intron 20.0%
!! TCATAATTCATAAGACATTT+GGG - Chr3:71516903-71516922 MsG0380015533.01.T01:intron 20.0%
!! TTATCATTAATGATTGAACT+CGG + Chr3:71519916-71519935 None:intergenic 20.0%
!! TTGTTATCTACTTTCAAATA+TGG - Chr3:71517732-71517751 MsG0380015533.01.T01:intron 20.0%
!!! AAATGGTTTATTTTATTCCA+GGG + Chr3:71519824-71519843 None:intergenic 20.0%
!!! AAGTCTTATTAAACATTATC+AGG + Chr3:71519047-71519066 None:intergenic 20.0%
!!! AGTCTTATTAAACATTATCA+GGG + Chr3:71519046-71519065 None:intergenic 20.0%
!!! ATGTTGTAGTTATCATTTTT+AGG + Chr3:71515617-71515636 None:intergenic 20.0%
!!! ATTTGAACTTGAATGAATTT+TGG - Chr3:71515981-71516000 MsG0380015533.01.T01:intron 20.0%
!!! CATTTTTTCTATAAGGAATT+AGG - Chr3:71519798-71519817 MsG0380015533.01.T01:intron 20.0%
!!! TAAATGGTTTATTTTATTCC+AGG + Chr3:71519825-71519844 None:intergenic 20.0%
!!! TCTTTAAGGTTTTAATATAG+AGG - Chr3:71520142-71520161 MsG0380015533.01.T01:intron 20.0%
!!! TGTTGTAGTTATCATTTTTA+GGG + Chr3:71515616-71515635 None:intergenic 20.0%
!!! TTAAATTTTGGTGTTTTTGA+AGG + Chr3:71515847-71515866 None:intergenic 20.0%
!!! TTAACCAATTCATATTTTGA+TGG + Chr3:71519357-71519376 None:intergenic 20.0%
!!! TTAGCAACAATTTGATTTTA+TGG - Chr3:71517028-71517047 MsG0380015533.01.T01:intron 20.0%
!!! TTCTTATTTTGTTTACATAC+AGG - Chr3:71518129-71518148 MsG0380015533.01.T01:intron 20.0%
!!! TTGAGATTTTAGATAAAATG+AGG - Chr3:71516036-71516055 MsG0380015533.01.T01:intron 20.0%
!!! TTTGTTATAATTGTTGAGTA+TGG - Chr3:71517329-71517348 MsG0380015533.01.T01:intron 20.0%
!!! TTTTTTTGTAATCCAAATTC+TGG - Chr3:71517786-71517805 MsG0380015533.01.T01:intron 20.0%
! ACAAGGCATATATAATACTA+CGG + Chr3:71517497-71517516 None:intergenic 25.0%
! ACACTAATGTGAAATGATAT+AGG - Chr3:71516840-71516859 MsG0380015533.01.T01:intron 25.0%
! ACAGATATTATCAAACATGT+AGG + Chr3:71516354-71516373 None:intergenic 25.0%
! ATTAGTACTTGAGTGAATTA+GGG + Chr3:71517531-71517550 None:intergenic 25.0%
! CAAATGCTTAAATACGTTTA+AGG - Chr3:71519569-71519588 MsG0380015533.01.T01:intron 25.0%
! CACTAATGTGAAATGATATA+GGG - Chr3:71516841-71516860 MsG0380015533.01.T01:intron 25.0%
! CTAAGTAATAGCATGAAAAA+AGG + Chr3:71519711-71519730 None:intergenic 25.0%
! CTAGAAATTGTTACAATTTG+AGG + Chr3:71516325-71516344 None:intergenic 25.0%
! GAACAGCTAAATTTAAAGAA+TGG + Chr3:71518403-71518422 None:intergenic 25.0%
! GACTTATTTAAGCTTATCTA+CGG - Chr3:71516880-71516899 MsG0380015533.01.T01:intron 25.0%
! GTCATAATTCATAAGACATT+TGG - Chr3:71516902-71516921 MsG0380015533.01.T01:intron 25.0%
! TATTAGTACTTGAGTGAATT+AGG + Chr3:71517532-71517551 None:intergenic 25.0%
! TCAAACATTTAATCAAACCT+TGG - Chr3:71515571-71515590 MsG0380015533.01.T01:intron 25.0%
! TGATATAGGGTTTATTACTT+AGG - Chr3:71516854-71516873 MsG0380015533.01.T01:intron 25.0%
! TGTTACAAACTGTGTTTATA+GGG - Chr3:71517977-71517996 MsG0380015533.01.T01:intron 25.0%
! TTAGATAAAATGAGGAAATG+AGG - Chr3:71516044-71516063 MsG0380015533.01.T01:intron 25.0%
! TTCACTCAAGTACTAATATA+TGG - Chr3:71517534-71517553 MsG0380015533.01.T01:intron 25.0%
! TTGATTGAACAAAATGATGT+TGG - Chr3:71519158-71519177 MsG0380015533.01.T01:CDS 25.0%
!! AAGAAAAAAAAGACCTTTTG+AGG + Chr3:71516778-71516797 None:intergenic 25.0%
!! ATTATACTAGATGAAAGCAT+CGG + Chr3:71518620-71518639 None:intergenic 25.0%
!! GTATGATCATAAGCTTTAAT+CGG - Chr3:71518909-71518928 MsG0380015533.01.T01:CDS 25.0%
!! TTAAAACCTTAAAGAGTACA+TGG + Chr3:71520137-71520156 None:intergenic 25.0%
!! TTGCTTGTTCTTATTTACTT+CGG - Chr3:71518321-71518340 MsG0380015533.01.T01:intron 25.0%
!! TTTTCGATTATTATACGACA+AGG + Chr3:71518444-71518463 None:intergenic 25.0%
!!! AATCTGAAGCTTTAAGAAAA+AGG + Chr3:71518527-71518546 None:intergenic 25.0%
!!! TACTTAGTTTGTAAGTATGA+AGG - Chr3:71518200-71518219 MsG0380015533.01.T01:intron 25.0%
!!! TACTTTTGTTATGTCATGTT+TGG + Chr3:71517185-71517204 None:intergenic 25.0%
!!! TCATATTTTGATGGTATTTC+TGG + Chr3:71519348-71519367 None:intergenic 25.0%
!!! TCTTGTCTTGTTTATTTTCA+TGG - Chr3:71516421-71516440 MsG0380015533.01.T01:intron 25.0%
AAACAAAAAAACACTCGTCT+AGG + Chr3:71518504-71518523 None:intergenic 30.0%
AATTAAGTAGAACAATTGCC+CGG + Chr3:71518375-71518394 None:intergenic 30.0%
ACCTAACATGCAAACATAAA+AGG - Chr3:71515908-71515927 MsG0380015533.01.T01:intron 30.0%
ACGCTTAAATATCATCTTGT+TGG + Chr3:71519102-71519121 None:intergenic 30.0%
ATAAGAATCTAGTGAAGTCT+AGG - Chr3:71519652-71519671 MsG0380015533.01.T01:intron 30.0%
ATACTAACCAGTAGTATGAT+TGG - Chr3:71518736-71518755 MsG0380015533.01.T01:intron 30.0%
ATAGCATGAAAAAAGGCAAT+AGG + Chr3:71519704-71519723 None:intergenic 30.0%
ATAGTTGAATCTTGTTAACC+GGG - Chr3:71518354-71518373 MsG0380015533.01.T01:intron 30.0%
ATATTATACGGACCAGAATT+TGG + Chr3:71517801-71517820 None:intergenic 30.0%
ATGAAATGAGAAGATGAAAC+TGG + Chr3:71516397-71516416 None:intergenic 30.0%
ATTTAAGCGTATTTGCCTTA+TGG - Chr3:71519112-71519131 MsG0380015533.01.T01:CDS 30.0%
CACTTTGTAAGTAAATCCTT+TGG - Chr3:71520064-71520083 MsG0380015533.01.T01:intron 30.0%
CAGTGAAGAAAACACAATAT+TGG + Chr3:71517231-71517250 None:intergenic 30.0%
CATAGTTGAATCTTGTTAAC+CGG - Chr3:71518353-71518372 MsG0380015533.01.T01:intron 30.0%
CGCCATTTAGTTATACTAAA+TGG + Chr3:71519841-71519860 None:intergenic 30.0%
CTAAATGGCGTATATAAATG+TGG - Chr3:71519851-71519870 MsG0380015533.01.T01:intron 30.0%
GAAGGAAATCATACAATGTT+AGG + Chr3:71515829-71515848 None:intergenic 30.0%
GTGTTACAAACTGTGTTTAT+AGG - Chr3:71517976-71517995 MsG0380015533.01.T01:intron 30.0%
GTTTGTAAGTATGAAGGTAA+TGG - Chr3:71518206-71518225 MsG0380015533.01.T01:intron 30.0%
TAGACAACGACATATTAACA+AGG + Chr3:71519198-71519217 None:intergenic 30.0%
TATGTATAATATGCACACCA+AGG + Chr3:71515591-71515610 None:intergenic 30.0%
TCACTATTGTAAGTCCTTAA+GGG - Chr3:71518937-71518956 MsG0380015533.01.T01:CDS 30.0%
TGTTAATATGTCGTTGTCTA+AGG - Chr3:71519198-71519217 MsG0380015533.01.T01:CDS 30.0%
TTCATGCTATTACTTAGCTT+TGG - Chr3:71519714-71519733 MsG0380015533.01.T01:intron 30.0%
TTGCTTCAAACATACATGTT+TGG - Chr3:71519409-71519428 MsG0380015533.01.T01:intron 30.0%
TTTAAGCGTATTTGCCTTAT+GGG - Chr3:71519113-71519132 MsG0380015533.01.T01:CDS 30.0%
! AAAGAAAATTTTCCAACTCC+CGG + Chr3:71517286-71517305 None:intergenic 30.0%
! AAATGCTCTACTTTGAAGAT+TGG - Chr3:71519975-71519994 MsG0380015533.01.T01:intron 30.0%
! AAGTCTTATCTCACTAAGTT+GGG + Chr3:71517077-71517096 None:intergenic 30.0%
! ACCTTTTATGTTTGCATGTT+AGG + Chr3:71515912-71515931 None:intergenic 30.0%
! ATAAGACATTTGGGATTGTT+TGG - Chr3:71516912-71516931 MsG0380015533.01.T01:intron 30.0%
! GCTTAAATACGTTTAAGGTT+AGG - Chr3:71519574-71519593 MsG0380015533.01.T01:intron 30.0%
! GCTTTTATCTCTCATAAAAC+AGG - Chr3:71520040-71520059 MsG0380015533.01.T01:intron 30.0%
! TAAGACATTTGGGATTGTTT+GGG - Chr3:71516913-71516932 MsG0380015533.01.T01:intron 30.0%
! TCATGCTATTACTTAGCTTT+GGG - Chr3:71519715-71519734 MsG0380015533.01.T01:intron 30.0%
! TGTGTGTAGATTTGAAACAA+TGG + Chr3:71515519-71515538 None:intergenic 30.0%
! TTTACCGTCAATTGCATTTT+GGG - Chr3:71517821-71517840 MsG0380015533.01.T01:intron 30.0%
! TTTTACCGTCAATTGCATTT+TGG - Chr3:71517820-71517839 MsG0380015533.01.T01:intron 30.0%
!! ATTTGGAGTGTTTTATGTCT+AGG - Chr3:71518987-71519006 MsG0380015533.01.T01:CDS 30.0%
!! CATGAGAACTTACTTGTTAT+TGG - Chr3:71515946-71515965 MsG0380015533.01.T01:intron 30.0%
!! TGTTTCTAGAAATCCTCAAA+AGG - Chr3:71516762-71516781 MsG0380015533.01.T01:intron 30.0%
!!! ACTTGAATGAATTTTGGAGT+TGG - Chr3:71515987-71516006 MsG0380015533.01.T01:intron 30.0%
!!! TGCACTATTTTGGTTGTATT+TGG - Chr3:71518815-71518834 MsG0380015533.01.T01:intron 30.0%
AAAAGCTGCCTGATAATAAC+TGG - Chr3:71518858-71518877 MsG0380015533.01.T01:intron 35.0%
AAAGCTGCCTGATAATAACT+GGG - Chr3:71518859-71518878 MsG0380015533.01.T01:intron 35.0%
AACCAACAAGTTTATGAGCA+GGG + Chr3:71517937-71517956 None:intergenic 35.0%
AATGCTACGCTACATACATT+AGG - Chr3:71519477-71519496 MsG0380015533.01.T01:intron 35.0%
ACACAGTTTGTAACACAGTA+TGG + Chr3:71517972-71517991 None:intergenic 35.0%
ACACTTCCTCTTCATTAACA+AGG + Chr3:71520365-71520384 None:intergenic 35.0%
ACCTCTTAACGTTACATCAA+GGG - Chr3:71515431-71515450 MsG0380015533.01.T01:three_prime_UTR 35.0%
ACTAACATAGTCCTAGATAG+AGG + Chr3:71518587-71518606 None:intergenic 35.0%
AGAACCCAAAATGCAATTGA+CGG + Chr3:71517828-71517847 None:intergenic 35.0%
AGATCGTCATTAGTTAGGTA+AGG + Chr3:71515169-71515188 None:intergenic 35.0%
AGGTTATAGAGCAAGTGATT+CGG - Chr3:71518149-71518168 MsG0380015533.01.T01:intron 35.0%
ATAACGCAAATCGCAAACAA+TGG + Chr3:71517632-71517651 None:intergenic 35.0%
ATAATGGTTACCCTCTATCT+AGG - Chr3:71518573-71518592 MsG0380015533.01.T01:intron 35.0%
ATACATGTTTGGAAATCCGT+TGG - Chr3:71519420-71519439 MsG0380015533.01.T01:intron 35.0%
ATGATCCTTGTTACACAGAT+CGG + Chr3:71517606-71517625 None:intergenic 35.0%
ATGGCGTATATAAATGTGGA+TGG - Chr3:71519855-71519874 MsG0380015533.01.T01:intron 35.0%
CAACAACCATGTACTCTTTA+AGG - Chr3:71520128-71520147 MsG0380015533.01.T01:intron 35.0%
CAAGAAGTCGAAATTCAGTT+TGG - Chr3:71518023-71518042 MsG0380015533.01.T01:intron 35.0%
CAGTAGTATGATTGGTATCT+GGG - Chr3:71518744-71518763 MsG0380015533.01.T01:intron 35.0%
CATGTCTATCATACTGCAAT+TGG + Chr3:71519449-71519468 None:intergenic 35.0%
CTAACATAGTCCTAGATAGA+GGG + Chr3:71518586-71518605 None:intergenic 35.0%
CTCACTATTGTAAGTCCTTA+AGG - Chr3:71518936-71518955 MsG0380015533.01.T01:CDS 35.0%
GAATTGGTTAATACCTGTGA+TGG - Chr3:71519366-71519385 MsG0380015533.01.T01:intron 35.0%
GCATAGTTAACAGTTCTCTA+TGG + Chr3:71519540-71519559 None:intergenic 35.0%
GGGCAATTGTTCTACTTAAT+TGG - Chr3:71518374-71518393 MsG0380015533.01.T01:intron 35.0%
GTACGATCACAAAGTGTATT+TGG - Chr3:71519017-71519036 MsG0380015533.01.T01:CDS 35.0%
GTATCCTTAACTCTCTTCAT+CGG - Chr3:71520311-71520330 MsG0380015533.01.T01:intron 35.0%
GTTAACAGTTCTCTATGGTT+TGG + Chr3:71519535-71519554 None:intergenic 35.0%
TATCCTTAACTCTCTTCATC+GGG - Chr3:71520312-71520331 MsG0380015533.01.T01:intron 35.0%
TCATACACAGACACAAAAGA+GGG - Chr3:71517353-71517372 MsG0380015533.01.T01:intron 35.0%
TCATACTCCCAGTTATTATC+AGG + Chr3:71518869-71518888 None:intergenic 35.0%
TTAGGGTTTACAGTACTACA+AGG + Chr3:71517514-71517533 None:intergenic 35.0%
TTCATACACAGACACAAAAG+AGG - Chr3:71517352-71517371 MsG0380015533.01.T01:intron 35.0%
TTGCTTGCTTCTATTAGACT+CGG - Chr3:71519614-71519633 MsG0380015533.01.T01:intron 35.0%
TTTAGCTGTTCATTTCCACA+AGG - Chr3:71518412-71518431 MsG0380015533.01.T01:intron 35.0%
! ACTTTGAAGATTGGAGATCT+GGG - Chr3:71519984-71520003 MsG0380015533.01.T01:intron 35.0%
! ATGAACTGGTTCAATGATAC+GGG + Chr3:71516530-71516549 None:intergenic 35.0%
! CAAGTCTTATCTCACTAAGT+TGG + Chr3:71517078-71517097 None:intergenic 35.0%
! CGTTTTCAGCTTATTTCAGT+AGG - Chr3:71516976-71516995 MsG0380015533.01.T01:intron 35.0%
! GATGAACTGGTTCAATGATA+CGG + Chr3:71516531-71516550 None:intergenic 35.0%
! GGTGTTTGAGAGAGATTTTT+GGG - Chr3:71516008-71516027 MsG0380015533.01.T01:intron 35.0%
! TACTTTGAAGATTGGAGATC+TGG - Chr3:71519983-71520002 MsG0380015533.01.T01:intron 35.0%
! TCAATGTATTGCTCTGGATA+TGG - Chr3:71516739-71516758 MsG0380015533.01.T01:intron 35.0%
! TCATACTACTGGTTAGTATC+AGG + Chr3:71518735-71518754 None:intergenic 35.0%
! TGATTCGGATTCAAGTGAAA+TGG - Chr3:71518164-71518183 MsG0380015533.01.T01:intron 35.0%
! TGGTGTTTGAGAGAGATTTT+TGG - Chr3:71516007-71516026 MsG0380015533.01.T01:intron 35.0%
! TGTAGATTTGAAACAATGGC+CGG + Chr3:71515515-71515534 None:intergenic 35.0%
! TTGTGTTTTCTTCACTGCTT+TGG - Chr3:71517234-71517253 MsG0380015533.01.T01:intron 35.0%
!! ACTGAGCGTTGGAATTTATT+TGG - Chr3:71518970-71518989 MsG0380015533.01.T01:CDS 35.0%
!! ATTTGTCTCACCTCTGAAAT+GGG + Chr3:71515129-71515148 None:intergenic 35.0%
!! GAAAAACGTGAAGAGTGTTT+GGG + Chr3:71515278-71515297 None:intergenic 35.0%
!! GATATTTTTGTACCCTTGCA+GGG - Chr3:71516153-71516172 MsG0380015533.01.T01:intron 35.0%
!! TGATATTTTTGTACCCTTGC+AGG - Chr3:71516152-71516171 MsG0380015533.01.T01:intron 35.0%
AAACTCGAATAGCTCTTTCC+AGG - Chr3:71516630-71516649 MsG0380015533.01.T01:intron 40.0%
AACTAATGACGATCTTCTGG+CGG - Chr3:71515174-71515193 MsG0380015533.01.T01:three_prime_UTR 40.0%
AACTCGAATAGCTCTTTCCA+GGG - Chr3:71516631-71516650 MsG0380015533.01.T01:intron 40.0%
AGAATCATACGTCAAGCCAA+AGG + Chr3:71520083-71520102 None:intergenic 40.0%
AGGCTCACTAAGATAGCTAA+TGG - Chr3:71516996-71517015 MsG0380015533.01.T01:intron 40.0%
ATATCGATCCACTGGAACTT+GGG - Chr3:71515246-71515265 MsG0380015533.01.T01:three_prime_UTR 40.0%
ATTGTCCGATCTGTGTAACA+AGG - Chr3:71517598-71517617 MsG0380015533.01.T01:CDS 40.0%
CAATGCAGCAAACTCATAGA+AGG + Chr3:71520394-71520413 None:intergenic 40.0%
CATACACAGACACAAAAGAG+GGG - Chr3:71517354-71517373 MsG0380015533.01.T01:intron 40.0%
CCAGAAGATCGTCATTAGTT+AGG + Chr3:71515174-71515193 None:intergenic 40.0%
CCAGATACCAATCATACTAC+TGG + Chr3:71518746-71518765 None:intergenic 40.0%
CCAGTAGTATGATTGGTATC+TGG - Chr3:71518743-71518762 MsG0380015533.01.T01:intron 40.0%
CCTAACTAATGACGATCTTC+TGG - Chr3:71515171-71515190 MsG0380015533.01.T01:three_prime_UTR 40.0%
CTATTGTAAGTCCTTAAGGG+AGG - Chr3:71518940-71518959 MsG0380015533.01.T01:CDS 40.0%
CTGTAACTTCGTGTTGGAAA+TGG + Chr3:71516231-71516250 None:intergenic 40.0%
CTTTCCAGTCAAGTTCTTGT+TGG - Chr3:71516716-71516735 MsG0380015533.01.T01:intron 40.0%
GAACCAACAAGTTTATGAGC+AGG + Chr3:71517938-71517957 None:intergenic 40.0%
GACCTCTTAACGTTACATCA+AGG - Chr3:71515430-71515449 MsG0380015533.01.T01:three_prime_UTR 40.0%
TAGTAGCAAGCTGAAAGAGA+GGG - Chr3:71519243-71519262 MsG0380015533.01.T01:CDS 40.0%
TATAAATGTGGATGGTGCTC+AGG - Chr3:71519863-71519882 MsG0380015533.01.T01:intron 40.0%
TGCATGGTGAGAATGTAACA+GGG - Chr3:71519303-71519322 MsG0380015533.01.T01:intron 40.0%
TGCTTGCTTCTATTAGACTC+GGG - Chr3:71519615-71519634 MsG0380015533.01.T01:intron 40.0%
TGTAACGTTAAGAGGTCTCA+AGG + Chr3:71515427-71515446 None:intergenic 40.0%
TGTAAGTAGCTGTGTTGCAA+TGG - Chr3:71520510-71520529 MsG0380015533.01.T01:intron 40.0%
TGTGTTTATAGGGACATGCA+TGG - Chr3:71517987-71518006 MsG0380015533.01.T01:intron 40.0%
TGTTGGTCAATGTATTGCTC+TGG - Chr3:71516733-71516752 MsG0380015533.01.T01:intron 40.0%
TTAGTAGCAAGCTGAAAGAG+AGG - Chr3:71519242-71519261 MsG0380015533.01.T01:CDS 40.0%
TTCCCTGCTCATAAACTTGT+TGG - Chr3:71517932-71517951 MsG0380015533.01.T01:intron 40.0%
TTCGGATTCAAGTGAAATGG+AGG - Chr3:71518167-71518186 MsG0380015533.01.T01:intron 40.0%
TTCTATAAGGAATTAGGCCC+TGG - Chr3:71519804-71519823 MsG0380015533.01.T01:intron 40.0%
TTGACCAACAAGAACTTGAC+TGG + Chr3:71516723-71516742 None:intergenic 40.0%
TTGGTTAATACCTGTGATGG+TGG - Chr3:71519369-71519388 MsG0380015533.01.T01:intron 40.0%
! CATTTGTCTCACCTCTGAAA+TGG + Chr3:71515130-71515149 None:intergenic 40.0%
! CTTATCTCACTAAGTTGGGT+CGG + Chr3:71517073-71517092 None:intergenic 40.0%
! GTAGATTTGAAACAATGGCC+GGG + Chr3:71515514-71515533 None:intergenic 40.0%
! TCACTGCCTTGTTAATGAAG+AGG - Chr3:71520356-71520375 MsG0380015533.01.T01:intron 40.0%
! TGCGTGAGTGTTGTAAACTT+CGG - Chr3:71519887-71519906 MsG0380015533.01.T01:intron 40.0%
!! ATTACTTAGCTTTGGGCAAC+AGG - Chr3:71519722-71519741 MsG0380015533.01.T01:intron 40.0%
!! CGAAAAACGTGAAGAGTGTT+TGG + Chr3:71515279-71515298 None:intergenic 40.0%
!! TTACTTAGCTTTGGGCAACA+GGG - Chr3:71519723-71519742 MsG0380015533.01.T01:intron 40.0%
!! TTTGTCTCACCTCTGAAATG+GGG + Chr3:71515128-71515147 None:intergenic 40.0%
!!! GTTGGGTTTGTTTTGGTCTA+TGG + Chr3:71516508-71516527 None:intergenic 40.0%
AAACCACCGATGAGTGCAAT+CGG + Chr3:71516663-71516682 None:intergenic 45.0%
AACATCCTTCACGTCCCATA+AGG + Chr3:71519130-71519149 None:intergenic 45.0%
AACCTCAGAGGTTGAAGGTT+CGG + Chr3:71515459-71515478 None:intergenic 45.0%
ACGACAAGGCATATACCTTG+TGG + Chr3:71518430-71518449 None:intergenic 45.0%
ACGCTACATACATTAGGCAG+TGG - Chr3:71519483-71519502 MsG0380015533.01.T01:intron 45.0%
ACGTTCATGCAGAATCAACG+CGG + Chr3:71515484-71515503 None:intergenic 45.0%
ACTATCAAGTGTCAGTCAGC+TGG - Chr3:71518788-71518807 MsG0380015533.01.T01:intron 45.0%
AGTTCCAGTGGATCGATATG+CGG + Chr3:71515245-71515264 None:intergenic 45.0%
ATAAGACAGAGCAGCTTACC+TGG + Chr3:71518067-71518086 None:intergenic 45.0%
ATACTGCAATTGGCAGCCAA+CGG + Chr3:71519439-71519458 None:intergenic 45.0%
ATTTGCCTTATGGGACGTGA+AGG - Chr3:71519122-71519141 MsG0380015533.01.T01:CDS 45.0%
CAACTAAGCGAAAAACCTCC+AGG - Chr3:71518046-71518065 MsG0380015533.01.T01:intron 45.0%
CAGGACAAGCAAAACCAAAC+TGG + Chr3:71518104-71518123 None:intergenic 45.0%
CATATCGATCCACTGGAACT+TGG - Chr3:71515245-71515264 MsG0380015533.01.T01:three_prime_UTR 45.0%
CGCTGCGTGCTTTCTTAAAA+AGG + Chr3:71516077-71516096 None:intergenic 45.0%
CGGTTAGAATCATCGCTTTC+AGG - Chr3:71519764-71519783 MsG0380015533.01.T01:intron 45.0%
CTATCAAGTGTCAGTCAGCT+GGG - Chr3:71518789-71518808 MsG0380015533.01.T01:intron 45.0%
CTGGTTCAATGATACGGGTT+GGG + Chr3:71516525-71516544 None:intergenic 45.0%
CTGTGTCTGTAACTTCGTGT+TGG + Chr3:71516237-71516256 None:intergenic 45.0%
CTTCTATTAGACTCGGGATC+AGG - Chr3:71519621-71519640 MsG0380015533.01.T01:intron 45.0%
GAGAATGTAACAGGGAATGC+TGG - Chr3:71519311-71519330 MsG0380015533.01.T01:intron 45.0%
GATTCTAACCGCCTTATGCT+TGG + Chr3:71519755-71519774 None:intergenic 45.0%
GCCCTTGATGTAACGTTAAG+AGG + Chr3:71515435-71515454 None:intergenic 45.0%
GGGATTGTTTGGGAGAACTT+AGG - Chr3:71516923-71516942 MsG0380015533.01.T01:intron 45.0%
GGGTAGTTCAACTTGCCAAA+CGG + Chr3:71515108-71515127 None:intergenic 45.0%
GTGCAGTTATTGAGCCAGTT+TGG - Chr3:71518087-71518106 MsG0380015533.01.T01:intron 45.0%
GTGCATGGTGAGAATGTAAC+AGG - Chr3:71519302-71519321 MsG0380015533.01.T01:intron 45.0%
GTGGTTTCACGATACGCTTA+AGG - Chr3:71516676-71516695 MsG0380015533.01.T01:intron 45.0%
GTTGAACTACCCCATTTCAG+AGG - Chr3:71515116-71515135 MsG0380015533.01.T01:three_prime_UTR 45.0%
GTTTCACGATACGCTTAAGG+AGG - Chr3:71516679-71516698 MsG0380015533.01.T01:intron 45.0%
TATGGGACGTGAAGGATGTT+AGG - Chr3:71519130-71519149 MsG0380015533.01.T01:CDS 45.0%
TTAGCAGCAAACTGGGATGA+AGG - Chr3:71519280-71519299 MsG0380015533.01.T01:intron 45.0%
TTCAACTTGTCCACCATCAC+AGG + Chr3:71519382-71519401 None:intergenic 45.0%
TTCTTGTCGCACAGAGTCAA+AGG + Chr3:71516453-71516472 None:intergenic 45.0%
! ACTGGTTCAATGATACGGGT+TGG + Chr3:71516526-71516545 None:intergenic 45.0%
! AGAGCTATTCGAGTTTCCAC+AGG + Chr3:71516626-71516645 None:intergenic 45.0%
! GCGTGAGTGTTGTAAACTTC+GGG - Chr3:71519888-71519907 MsG0380015533.01.T01:intron 45.0%
!! AGTGCGGTCTTGTTGTTTCT+TGG + Chr3:71516567-71516586 None:intergenic 45.0%
!! ATGGTGGACAAGTTGAACAG+AGG - Chr3:71519385-71519404 MsG0380015533.01.T01:intron 45.0%
!! CTGCTTTGGAAATGAAGCTG+AGG - Chr3:71517248-71517267 MsG0380015533.01.T01:intron 45.0%
!! GGTTCTGAATCTCGTTCAGT+TGG - Chr3:71517842-71517861 MsG0380015533.01.T01:intron 45.0%
!! TCAGGGGCATTGTTGTAATC+TGG - Chr3:71517470-71517489 MsG0380015533.01.T01:CDS 45.0%
!! TGAAAGAGAGGGTGTCCAAA+CGG - Chr3:71519254-71519273 MsG0380015533.01.T01:CDS 45.0%
!!! GATACGGGTTGGGTTTGTTT+TGG + Chr3:71516515-71516534 None:intergenic 45.0%
AAACGTCCAACGTTCGACGA+GGG + Chr3:71515338-71515357 None:intergenic 50.0%
AACCGCCTTATGCTTGGATC+AGG + Chr3:71519749-71519768 None:intergenic 50.0%
AACGGGAGTTAGCAGCAAAC+TGG - Chr3:71519272-71519291 MsG0380015533.01.T01:intron 50.0%
ACAGACACAAAAGAGGGGCA+AGG - Chr3:71517359-71517378 MsG0380015533.01.T01:intron 50.0%
ACGGGAGTTAGCAGCAAACT+GGG - Chr3:71519273-71519292 MsG0380015533.01.T01:intron 50.0%
ACTGGAAAGATCCCCACGTT+TGG + Chr3:71516705-71516724 None:intergenic 50.0%
AGACACAAAAGAGGGGCAAG+GGG - Chr3:71517361-71517380 MsG0380015533.01.T01:intron 50.0%
ATTCCACCTTAGCAGCAGTG+CGG + Chr3:71516583-71516602 None:intergenic 50.0%
CAGACACAAAAGAGGGGCAA+GGG - Chr3:71517360-71517379 MsG0380015533.01.T01:intron 50.0%
CCTTAACTCTCTTCATCGGG+CGG - Chr3:71520315-71520334 MsG0380015533.01.T01:intron 50.0%
CTGAGGTTAGATACAGTGCC+GGG - Chr3:71517265-71517284 MsG0380015533.01.T01:intron 50.0%
GCTGAGGTTAGATACAGTGC+CGG - Chr3:71517264-71517283 MsG0380015533.01.T01:intron 50.0%
GTAAGTCCTTAAGGGAGGTC+AGG - Chr3:71518945-71518964 MsG0380015533.01.T01:CDS 50.0%
GTTCCAGTGGATCGATATGC+GGG + Chr3:71515244-71515263 None:intergenic 50.0%
TAAACGTCCAACGTTCGACG+AGG + Chr3:71515339-71515358 None:intergenic 50.0%
TCGAATAGCTCTTTCCAGGG+TGG - Chr3:71516634-71516653 MsG0380015533.01.T01:intron 50.0%
TTGGCCATGCATGCATGTCA+TGG + Chr3:71519516-71519535 None:intergenic 50.0%
! CAAACTGGGATGAAGGTGCA+TGG - Chr3:71519287-71519306 MsG0380015533.01.T01:intron 50.0%
! GATTTGAAACAATGGCCGGG+TGG + Chr3:71515511-71515530 None:intergenic 50.0%
! GTAACAGGGAATGCTGGCTA+AGG - Chr3:71519317-71519336 MsG0380015533.01.T01:intron 50.0%
! GTTTGCTGCTAACTCCCGTT+TGG + Chr3:71519272-71519291 None:intergenic 50.0%
! TGGTTGCCGATTGCACTCAT+CGG - Chr3:71516654-71516673 MsG0380015533.01.T01:intron 50.0%
! TTAGATACAGTGCCGGGAGT+TGG - Chr3:71517271-71517290 MsG0380015533.01.T01:intron 50.0%
! TTTTTGCTCGCACCCTGCAA+GGG + Chr3:71516168-71516187 None:intergenic 50.0%
!! AGGGGAGGGTATCATTCACT+TGG + Chr3:71515319-71515338 None:intergenic 50.0%
!! GAAAGAGAGGGTGTCCAAAC+GGG - Chr3:71519255-71519274 MsG0380015533.01.T01:CDS 50.0%
!! GAGGGTATCATTCACTTGGG+TGG + Chr3:71515315-71515334 None:intergenic 50.0%
!! GCGGTCTTGTTGTTTCTTGG+TGG + Chr3:71516564-71516583 None:intergenic 50.0%
!! GGGGAGGGTATCATTCACTT+GGG + Chr3:71515318-71515337 None:intergenic 50.0%
AACGTCCAACGTTCGACGAG+GGG + Chr3:71515337-71515356 None:intergenic 55.0%
ACAAGACCGCACTGCTGCTA+AGG - Chr3:71516574-71516593 MsG0380015533.01.T01:intron 55.0%
ACACAAGGAGGTGGCACGTT+CGG + Chr3:71515364-71515383 None:intergenic 55.0%
ACGCTTAAGGAGGCCAAACG+TGG - Chr3:71516689-71516708 MsG0380015533.01.T01:intron 55.0%
AGACAGAGCAGCTTACCTGG+AGG + Chr3:71518064-71518083 None:intergenic 55.0%
ATCAACGCGGAGAACCTCAG+AGG + Chr3:71515471-71515490 None:intergenic 55.0%
ATGCTTGAGTCCTCGCCGTT+TGG - Chr3:71515090-71515109 MsG0380015533.01.T01:three_prime_UTR 55.0%
CACCGAACCTTCAACCTCTG+AGG - Chr3:71515454-71515473 MsG0380015533.01.T01:intron 55.0%
CAGGGCCTGATCCAAGCATA+AGG - Chr3:71519741-71519760 MsG0380015533.01.T01:intron 55.0%
CAGTTGCCTGACCTCCCTTA+AGG + Chr3:71518954-71518973 None:intergenic 55.0%
CCATGCATGCATGTCATGGC+AGG + Chr3:71519512-71519531 None:intergenic 55.0%
CCGCCCGATGAAGAGAGTTA+AGG + Chr3:71520318-71520337 None:intergenic 55.0%
CCTGCCATGACATGCATGCA+TGG - Chr3:71519509-71519528 MsG0380015533.01.T01:intron 55.0%
CGCTTAAGGAGGCCAAACGT+GGG - Chr3:71516690-71516709 MsG0380015533.01.T01:intron 55.0%
CGGAGAACCTCAGAGGTTGA+AGG + Chr3:71515464-71515483 None:intergenic 55.0%
GCTTAAGGAGGCCAAACGTG+GGG - Chr3:71516691-71516710 MsG0380015533.01.T01:intron 55.0%
GGCCTGATCCAAGCATAAGG+CGG - Chr3:71519744-71519763 MsG0380015533.01.T01:intron 55.0%
GGTGCGAGCAAAAACGTGCT+GGG - Chr3:71516174-71516193 MsG0380015533.01.T01:intron 55.0%
GTTCAACTTGCCAAACGGCG+AGG + Chr3:71515103-71515122 None:intergenic 55.0%
TCAACCAACGAGTCAACCCC+CGG + Chr3:71515389-71515408 None:intergenic 55.0%
TCACCCGCATATCGATCCAC+TGG - Chr3:71515238-71515257 MsG0380015533.01.T01:three_prime_UTR 55.0%
TCCACAGGCTCCACCTTCTT+CGG + Chr3:71516611-71516630 None:intergenic 55.0%
TGCATGAACGTCGATCCACC+CGG - Chr3:71515493-71515512 MsG0380015533.01.T01:intron 55.0%
TGGTTCGTGCAGCGATGAAC+TGG + Chr3:71516544-71516563 None:intergenic 55.0%
! GTTTTTGCTCGCACCCTGCA+AGG + Chr3:71516169-71516188 None:intergenic 55.0%
! TTGCCGATTGCACTCATCGG+TGG - Chr3:71516657-71516676 MsG0380015533.01.T01:intron 55.0%
!! AGCTGGGCGCTGCACTATTT+TGG - Chr3:71518805-71518824 MsG0380015533.01.T01:intron 55.0%
AAAAGAGGGGCAAGGGGCAG+GGG - Chr3:71517367-71517386 MsG0380015533.01.T01:intron 60.0%
ACAAAAGAGGGGCAAGGGGC+AGG - Chr3:71517365-71517384 MsG0380015533.01.T01:intron 60.0%
ACAGGCTCCACCTTCTTCGG+TGG + Chr3:71516608-71516627 None:intergenic 60.0%
ACCGAAGAAGGTGGAGCCTG+TGG - Chr3:71516607-71516626 MsG0380015533.01.T01:intron 60.0%
AGACCCACAGCTGCACTTGC+AGG - Chr3:71517871-71517890 MsG0380015533.01.T01:intron 60.0%
AGACCGCACTGCTGCTAAGG+TGG - Chr3:71516577-71516596 MsG0380015533.01.T01:intron 60.0%
AGTCAACCCCCGGAGACACA+AGG + Chr3:71515379-71515398 None:intergenic 60.0%
AGTGCAATCGGCAACCACCC+TGG + Chr3:71516651-71516670 None:intergenic 60.0%
CAAAAGAGGGGCAAGGGGCA+GGG - Chr3:71517366-71517385 MsG0380015533.01.T01:intron 60.0%
CAGCCTGCAAGTGCAGCTGT+GGG + Chr3:71517877-71517896 None:intergenic 60.0%
CTCCCTCCGCCCTTGCATTT+GGG - Chr3:71517416-71517435 MsG0380015533.01.T01:intron 60.0%
GAGGTCAGGCAACTGAGCGT+TGG - Chr3:71518959-71518978 MsG0380015533.01.T01:CDS 60.0%
GCGAGCAAAAACGTGCTGGG+TGG - Chr3:71516177-71516196 MsG0380015533.01.T01:intron 60.0%
GGAATCGCCACCGAAGAAGG+TGG - Chr3:71516598-71516617 MsG0380015533.01.T01:intron 60.0%
GGAGCACACCCAAGTTCCAG+TGG + Chr3:71515257-71515276 None:intergenic 60.0%
GGGTGCGAGCAAAAACGTGC+TGG - Chr3:71516173-71516192 MsG0380015533.01.T01:intron 60.0%
GGTGGAATCGCCACCGAAGA+AGG - Chr3:71516595-71516614 MsG0380015533.01.T01:intron 60.0%
GTGCCACCTCCTTGTGTCTC+CGG - Chr3:71515367-71515386 MsG0380015533.01.T01:three_prime_UTR 60.0%
TCCAACGTTCGACGAGGGGA+GGG + Chr3:71515333-71515352 None:intergenic 60.0%
TCCCTCCGCCCTTGCATTTG+GGG - Chr3:71517417-71517436 MsG0380015533.01.T01:intron 60.0%
TGCCACCTCCTTGTGTCTCC+GGG - Chr3:71515368-71515387 MsG0380015533.01.T01:three_prime_UTR 60.0%
AATGCCCCTGACCCGTACCG+TGG + Chr3:71517461-71517480 None:intergenic 65.0%
ACCCCCAAATGCAAGGGCGG+AGG + Chr3:71517422-71517441 None:intergenic 65.0%
ACCCTCCCCTCGTCGAACGT+TGG - Chr3:71515329-71515348 MsG0380015533.01.T01:three_prime_UTR 65.0%
ATGCCCCTGACCCGTACCGT+GGG + Chr3:71517460-71517479 None:intergenic 65.0%
CAACCCCCGGAGACACAAGG+AGG + Chr3:71515376-71515395 None:intergenic 65.0%
CCACCTCCTTGTGTCTCCGG+GGG - Chr3:71515370-71515389 MsG0380015533.01.T01:three_prime_UTR 65.0%
CCCCCAAATGCAAGGGCGGA+GGG + Chr3:71517421-71517440 None:intergenic 65.0%
CCCCGCACCCCCAAATGCAA+GGG + Chr3:71517428-71517447 None:intergenic 65.0%
CCCTCCGCCCTTGCATTTGG+GGG - Chr3:71517418-71517437 MsG0380015533.01.T01:intron 65.0%
CGCACCCCCAAATGCAAGGG+CGG + Chr3:71517425-71517444 None:intergenic 65.0%
CGCCCTTGCATTTGGGGGTG+CGG - Chr3:71517423-71517442 MsG0380015533.01.T01:intron 65.0%
GCAGCCTGCAAGTGCAGCTG+TGG + Chr3:71517878-71517897 None:intergenic 65.0%
GCCACCTCCTTGTGTCTCCG+GGG - Chr3:71515369-71515388 MsG0380015533.01.T01:three_prime_UTR 65.0%
GCTCCCTCCGCCCTTGCATT+TGG - Chr3:71517415-71517434 MsG0380015533.01.T01:intron 65.0%
GTCCAACGTTCGACGAGGGG+AGG + Chr3:71515334-71515353 None:intergenic 65.0%
! CCCTTGCATTTGGGGGTGCG+GGG - Chr3:71517425-71517444 MsG0380015533.01.T01:intron 65.0%
! CCTTGCATTTGGGGGTGCGG+GGG - Chr3:71517426-71517445 MsG0380015533.01.T01:intron 65.0%
! GCCCTTGCATTTGGGGGTGC+GGG - Chr3:71517424-71517443 MsG0380015533.01.T01:intron 65.0%
!! GTCTCCGGGGGTTGACTCGT+TGG - Chr3:71515382-71515401 MsG0380015533.01.T01:three_prime_UTR 65.0%
AGCCCCCACGGTACGGGTCA+GGG - Chr3:71517453-71517472 MsG0380015533.01.T01:CDS 70.0%
CCCCCGCACCCCCAAATGCA+AGG + Chr3:71517429-71517448 None:intergenic 70.0%
CCCCCGGAGACACAAGGAGG+TGG + Chr3:71515373-71515392 None:intergenic 70.0%
GGCGATAGCCCCCACGGTAC+GGG - Chr3:71517447-71517466 MsG0380015533.01.T01:exon 70.0%
GGGCGATAGCCCCCACGGTA+CGG - Chr3:71517446-71517465 MsG0380015533.01.T01:exon 70.0%
TAGCCCCCACGGTACGGGTC+AGG - Chr3:71517452-71517471 MsG0380015533.01.T01:exon 70.0%
TGCCCCTGACCCGTACCGTG+GGG + Chr3:71517459-71517478 None:intergenic 70.0%
GCCCCCACGGTACGGGTCAG+GGG - Chr3:71517454-71517473 MsG0380015533.01.T01:CDS 75.0%
GCCCCTGACCCGTACCGTGG+GGG + Chr3:71517458-71517477 None:intergenic 75.0%
TGCGGGGGCGATAGCCCCCA+CGG - Chr3:71517441-71517460 MsG0380015533.01.T01:exon 75.0%
Chromosome Type Strat End Strand Name
Chr3 gene 71515090 71520569 71515090 ID=MsG0380015533.01;Name=MsG0380015533.01
Chr3 mRNA 71515090 71520569 71515090 ID=MsG0380015533.01.T01;Parent=MsG0380015533.01;Name=MsG0380015533.01.T01;_AED=0.49;_eAED=0.52;_QI=0|0.5|0.6|1|0.75|0.6|5|394|183
Chr3 exon 71515090 71515468 71515090 ID=MsG0380015533.01.T01:exon:619;Parent=MsG0380015533.01.T01
Chr3 exon 71517438 71517508 71517438 ID=MsG0380015533.01.T01:exon:618;Parent=MsG0380015533.01.T01
Chr3 exon 71517592 71517661 71517592 ID=MsG0380015533.01.T01:exon:617;Parent=MsG0380015533.01.T01
Chr3 exon 71518899 71519276 71518899 ID=MsG0380015533.01.T01:exon:616;Parent=MsG0380015533.01.T01
Chr3 exon 71520522 71520569 71520522 ID=MsG0380015533.01.T01:exon:615;Parent=MsG0380015533.01.T01
Chr3 CDS 71520522 71520569 71520522 ID=MsG0380015533.01.T01:cds;Parent=MsG0380015533.01.T01
Chr3 CDS 71518899 71519276 71518899 ID=MsG0380015533.01.T01:cds;Parent=MsG0380015533.01.T01
Chr3 CDS 71517592 71517661 71517592 ID=MsG0380015533.01.T01:cds;Parent=MsG0380015533.01.T01
Chr3 CDS 71517453 71517508 71517453 ID=MsG0380015533.01.T01:cds;Parent=MsG0380015533.01.T01
Chr3 three_prime_UTR 71517438 71517452 71517438 ID=MsG0380015533.01.T01:three_prime_utr;Parent=MsG0380015533.01.T01
Chr3 three_prime_UTR 71515090 71515468 71515090 ID=MsG0380015533.01.T01:three_prime_utr;Parent=MsG0380015533.01.T01
Gene Sequence

>MsG0380015533.01.T01

ATGCTTGAGTCCTCGCCGTTTGGCAAGTTGAACTACCCCATTTCAGAGATAACAACAAACCAGTTTCATCTTCTCATTTCATTTCATCTTGTCTTGTTTATTTTCATGGCAAAATCCTTTGACTCTGTGCGACAAGAATTATCACGAATTGCAAAATCTGCAACAAAAATCCATAGACCAAAACAAACCCAACCCGTATCATTGAACCAGTTCATCGCTGCACGAACCACCAAGAAACAACAAGACCGCACTGCTGCTAAGGTGGAATCGCCACCGAAGAAGGTGGAGCCTGTGGAAACTCGAATAGCTCTTTCCAGGGTGGTTGCCGATTGCACTCATCGGTGGTTTCACGATACGCTTAAGGAGGCCAAACGTGGGGATCTTTCCAGTCAAGTTCTTGTTGGTCAATGTATTGCTCTGGATATGGGACATGCATGGATCAGTAGAGCATCAAGAAGTCGAAATTCAGTTTGGCAACTAAGCGAAAAACCTCCAGGTTATAGAGCAAGTGATTCGGATTCAAGTGAAATGGAGGAAAAATCTACTACTTAG

Protein sequence

>MsG0380015533.01.T01

MLESSPFGKLNYPISEITTNQFHLLISFHLVLFIFMAKSFDSVRQELSRIAKSATKIHRPKQTQPVSLNQFIAARTTKKQQDRTAAKVESPPKKVEPVETRIALSRVVADCTHRWFHDTLKEAKRGDLSSQVLVGQCIALDMGHAWISRASRSRNSVWQLSEKPPGYRASDSDSSEMEEKSTT*