AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480020537.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480020537.01.T01 MTR_4g053270 86.717 527 17 1 11 484 63 589 0.0 903
MsG0480020537.01.T01 MTR_5g077170 41.399 529 253 5 13 484 63 591 1.18e-142 422
MsG0480020537.01.T01 MTR_6g074910 39.509 529 261 7 13 484 62 588 4.71e-130 389
MsG0480020537.01.T01 MTR_8g016270 26.910 576 318 7 8 482 73 646 5.52e-75 248
MsG0480020537.01.T01 MTR_1g014080 27.018 570 315 10 13 482 67 635 4.50e-71 238
MsG0480020537.01.T01 MTR_2g006300 30.246 529 301 6 16 484 63 583 2.73e-68 229
MsG0480020537.01.T01 MTR_8g088730 29.924 528 292 10 22 484 75 589 2.49e-67 226
MsG0480020537.01.T01 MTR_3g105950 33.544 316 208 2 168 482 320 634 3.37e-57 200
MsG0480020537.01.T01 MTR_0204s0010 29.167 336 226 5 156 484 118 448 2.46e-42 156
MsG0480020537.01.T01 MTR_5g098730 28.529 333 227 5 156 482 336 663 7.42e-36 141
MsG0480020537.01.T01 MTR_3g082140 29.129 333 225 5 156 482 330 657 9.46e-36 140
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480020537.01.T01 AT1G08350 49.716 529 211 4 11 484 61 589 1.16e-180 519
MsG0480020537.01.T01 AT1G08350 49.716 529 211 4 11 484 61 589 1.16e-180 519
MsG0480020537.01.T01 AT1G08350 49.112 507 203 4 33 484 2 508 2.34e-170 489
MsG0480020537.01.T01 AT2G01970 42.315 527 246 4 15 484 67 592 4.40e-151 444
MsG0480020537.01.T01 AT1G14670 42.505 527 245 4 15 484 67 592 8.23e-150 440
MsG0480020537.01.T01 AT5G37310 42.614 528 245 4 14 484 67 593 3.29e-149 439
MsG0480020537.01.T01 AT5G37310 42.614 528 245 4 14 484 67 593 3.29e-149 439
MsG0480020537.01.T01 AT1G08350 47.609 460 186 4 11 415 61 520 9.29e-144 423
MsG0480020537.01.T01 AT2G24170 27.797 572 312 9 11 482 65 635 2.31e-72 241
MsG0480020537.01.T01 AT1G10950 29.301 529 306 6 16 484 69 589 2.42e-68 229
MsG0480020537.01.T01 AT3G13772 33.430 344 225 3 140 482 299 639 4.41e-65 222
MsG0480020537.01.T01 AT1G55130 32.558 344 228 3 140 482 295 635 2.75e-62 214
MsG0480020537.01.T01 AT5G25100 32.911 316 210 2 168 482 335 649 7.39e-56 197
MsG0480020537.01.T01 AT5G25100 32.911 316 210 2 168 482 328 642 9.32e-56 197
MsG0480020537.01.T01 AT5G10840 33.228 316 209 2 168 482 332 646 5.62e-55 194
MsG0480020537.01.T01 AT5G35160 28.955 335 228 5 156 484 300 630 2.23e-37 145
MsG0480020537.01.T01 AT5G35160 28.955 335 228 5 156 484 328 658 2.99e-37 145
MsG0480020537.01.T01 AT5G35160 28.955 335 228 5 156 484 328 658 2.99e-37 145
MsG0480020537.01.T01 AT5G35160 28.955 335 228 5 156 484 328 658 2.99e-37 145
MsG0480020537.01.T01 AT4G12650 29.851 335 220 6 156 482 323 650 3.27e-36 142
MsG0480020537.01.T01 AT2G24170 24.211 380 189 7 11 291 65 444 8.34e-30 121

Find 141 sgRNAs with CRISPR-Local

Find 478 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCTTGACGATCTTCCATTT+TGG 0.144233 4:-43023153 MsG0480020537.01.T01:CDS
TTACAGCTATCCTTCTTTAT+TGG 0.176765 4:-43019146 MsG0480020537.01.T01:CDS
TCGGTTTAGGTCCAAGTTTC+AGG 0.182537 4:-43020247 MsG0480020537.01.T01:CDS
TATGCTTTCTTCCTGATATT+TGG 0.187363 4:-43019104 MsG0480020537.01.T01:CDS
CACCACTCCAAAGTGTAATT+TGG 0.191731 4:-43018672 MsG0480020537.01.T01:three_prime_UTR
ATTGTGATTCTTAGTTTATT+TGG 0.207132 4:-43020315 MsG0480020537.01.T01:CDS
ATACACTCTTCCTGGCATTT+TGG 0.207826 4:-43020070 MsG0480020537.01.T01:CDS
ACACCGTTTCAAATGTTTAT+TGG 0.219571 4:-43020165 MsG0480020537.01.T01:CDS
AATTCACTTATTCGGTTATC+TGG 0.221535 4:-43022949 MsG0480020537.01.T01:CDS
AAGCTTACAATTGATGAAAT+TGG 0.229144 4:-43023220 MsG0480020537.01.T01:CDS
ACATTATTGCAATATCTTAC+AGG 0.260840 4:-43020368 MsG0480020537.01.T01:CDS
CCCATCCATTCTCAGCAAAT+TGG 0.263581 4:+43020556 None:intergenic
GATTGATGAACTCTTCTCTT+TGG 0.264860 4:-43018970 MsG0480020537.01.T01:three_prime_UTR
TGCAGGACAATTGCACTAAA+AGG 0.269603 4:+43020132 None:intergenic
CTTCTGTTCCTAGCATTTAT+CGG 0.286631 4:-43020681 MsG0480020537.01.T01:CDS
GCACAGTTTGGAAGAGCTTT+AGG 0.299648 4:-43018825 MsG0480020537.01.T01:three_prime_UTR
CAAACTGAACATGTGTAAAA+AGG 0.301015 4:+43023068 None:intergenic
TGATGTTAAATTCACTTATT+CGG 0.301127 4:-43022957 MsG0480020537.01.T01:CDS
CGATCCCATTACTCGCATTC+GGG 0.303759 4:-43020284 MsG0480020537.01.T01:CDS
ACCATAACCGAACATGAAAA+TGG 0.323419 4:+43019205 None:intergenic
GAGTAATTGGATATCGGTTT+AGG 0.339176 4:-43020260 MsG0480020537.01.T01:CDS
GTTATATCTACAGCGCGATT+TGG 0.345977 4:+43022995 None:intergenic
GTTTGTATGAGTTCAAATTC+AGG 0.346786 4:-43023276 MsG0480020537.01.T01:CDS
AGAGGGTAGGGTGTTAGAAT+TGG 0.349209 4:-43018781 MsG0480020537.01.T01:three_prime_UTR
AACTGATGGCACCAAATATC+AGG 0.370061 4:+43019093 None:intergenic
GAGAAGAGTGTTAGTCTAGC+TGG 0.385735 4:-43020435 MsG0480020537.01.T01:CDS
CATACCTCCACCACCATTCA+TGG 0.389249 4:+43019968 None:intergenic
CTAGCGCAAATGAAGAAGAT+AGG 0.390988 4:-43022641 MsG0480020537.01.T01:CDS
GGAAGCTGTTGAATCTCTTT+CGG 0.396624 4:+43020201 None:intergenic
TCTGGAATGCCACTGAATTA+CGG 0.400032 4:-43022931 MsG0480020537.01.T01:intron
AAATCCATGGCTGCACAGTT+TGG 0.401672 4:-43018837 MsG0480020537.01.T01:three_prime_UTR
TACAAAATATACACTCTTCC+TGG 0.403164 4:-43020078 MsG0480020537.01.T01:CDS
TCGATCCCATTACTCGCATT+CGG 0.405856 4:-43020285 MsG0480020537.01.T01:CDS
CCATGGATTTAGTCTTGATT+CGG 0.410770 4:+43018850 None:intergenic
GTCACAGCTGGACTCCCATT+GGG 0.412663 4:-43020345 MsG0480020537.01.T01:CDS
GTCCAAGTTTCAGGTCCCCT+TGG 0.415276 4:-43020238 MsG0480020537.01.T01:CDS
CAGATGAAAGAGTGAATAGA+AGG 0.424083 4:+43020613 None:intergenic
GAAGATGAAAGTTTGATTCA+TGG 0.429871 4:-43023112 MsG0480020537.01.T01:CDS
CATGGCCAATTTGCTGAGAA+TGG 0.430352 4:-43020561 MsG0480020537.01.T01:CDS
TCCAAGTTTCAGGTCCCCTT+GGG 0.431667 4:-43020237 MsG0480020537.01.T01:CDS
CGTACACCTGGTGTAATTGC+AGG 0.436823 4:+43020115 None:intergenic
AGAGATGAGTGGAATGATAG+AGG 0.443890 4:-43018799 MsG0480020537.01.T01:three_prime_UTR
AAGAGATTCAACAGCTTCCT+TGG 0.444008 4:-43020197 MsG0480020537.01.T01:CDS
TTTGATAACAGTTTATTCCT+TGG 0.449376 4:-43018929 MsG0480020537.01.T01:three_prime_UTR
ACCCAAGGGGACCTGAAACT+TGG 0.452480 4:+43020236 None:intergenic
AACATCAATACCAACATCCT+TGG 0.453461 4:+43022973 None:intergenic
GTCGTAGAAGTGAAAGCATT+TGG 0.455452 4:-43023022 MsG0480020537.01.T01:CDS
TGGGATTCTTTACATTGGTC+CGG 0.456365 4:-43020415 MsG0480020537.01.T01:CDS
AGTTTGATGTTCTTTACAAC+GGG 0.456822 4:-43023051 MsG0480020537.01.T01:CDS
CCAGGTGTACGCTAGTTTGT+GGG 0.458018 4:-43020103 MsG0480020537.01.T01:CDS
AGCTTACAAGATTAGCAGTT+GGG 0.461088 4:+43022533 None:intergenic
ACCAGGTGTACGCTAGTTTG+TGG 0.462770 4:-43020104 MsG0480020537.01.T01:CDS
TGTAAAACCAAATTACACTT+TGG 0.464241 4:+43018665 None:intergenic
TTCAACAGCTTCCTTGGTAC+AGG 0.467031 4:-43020191 MsG0480020537.01.T01:CDS
CAATTTGCAATCAAACAAGT+TGG 0.468072 4:+43018719 None:intergenic
GGTCACAGCTGGACTCCCAT+TGG 0.470714 4:-43020346 MsG0480020537.01.T01:CDS
GGGTGTTAGAATTGGAAGTC+AGG 0.472379 4:-43018773 MsG0480020537.01.T01:three_prime_UTR
GAGTGGAATGATAGAGGGTA+GGG 0.473418 4:-43018793 MsG0480020537.01.T01:three_prime_UTR
ATTGTTGCGCTCGTAAATAT+TGG 0.476257 4:-43020021 MsG0480020537.01.T01:CDS
GAGATGAGTGGAATGATAGA+GGG 0.476571 4:-43018798 MsG0480020537.01.T01:three_prime_UTR
GCCAATTTGCTGAGAATGGA+TGG 0.479155 4:-43020557 MsG0480020537.01.T01:CDS
TGGCTTCCTCGTAAACAACT+TGG 0.479913 4:+43018739 None:intergenic
TGATGAAATTGGTATCTTGA+AGG 0.481322 4:-43023209 MsG0480020537.01.T01:CDS
TCACAATAATAGAGCCCAAT+GGG 0.481419 4:+43020331 None:intergenic
CGGATATCTCTTTGTACCCA+AGG 0.484114 4:+43020221 None:intergenic
AAGAAGATAGGGAGGTTGGT+TGG 0.486649 4:-43022629 MsG0480020537.01.T01:CDS
GAGAGTCCACCACGACTGTA+TGG 0.489713 4:+43020648 None:intergenic
CCGTTTCAAATGTTTATTGG+AGG 0.494446 4:-43020162 MsG0480020537.01.T01:CDS
TTTGTATGAGTTCAAATTCA+GGG 0.499515 4:-43023275 MsG0480020537.01.T01:CDS
TGAGTGGAATGATAGAGGGT+AGG 0.506568 4:-43018794 MsG0480020537.01.T01:three_prime_UTR
TACTTAACTGCATCCTTCCA+TGG 0.518305 4:-43020579 MsG0480020537.01.T01:CDS
AATGGTGATCGTTTGAGCAA+TGG 0.518346 4:-43023298 MsG0480020537.01.T01:CDS
CGCATTGTAGCCAATAAAGA+AGG 0.520943 4:+43019136 None:intergenic
CATTATTGCAATATCTTACA+GGG 0.521402 4:-43020367 MsG0480020537.01.T01:CDS
AATAAGGACGAGTGCGGAGG+AGG 0.524216 4:+43022579 None:intergenic
ATATCTTACAGGGTCACAGC+TGG 0.526781 4:-43020357 MsG0480020537.01.T01:CDS
CTAGCTGGGATTCTTTACAT+TGG 0.529641 4:-43020420 MsG0480020537.01.T01:CDS
CCTCCAATAAACATTTGAAA+CGG 0.530553 4:+43020162 None:intergenic
TGAAAGTTTGATTCATGGTG+GGG 0.534546 4:-43023107 MsG0480020537.01.T01:CDS
CACCACGACTGTATGGATAG+AGG 0.534811 4:+43020655 None:intergenic
ATGAAAGTTTGATTCATGGT+GGG 0.539192 4:-43023108 MsG0480020537.01.T01:CDS
AGAAGAGTGTTAGTCTAGCT+GGG 0.542187 4:-43020434 MsG0480020537.01.T01:CDS
CTCAGCAAATTGGCCATGGA+AGG 0.542407 4:+43020566 None:intergenic
TTTCAAGCACAAAGTAACAT+TGG 0.543692 4:-43019004 MsG0480020537.01.T01:three_prime_UTR
TAGCGCAAATGAAGAAGATA+GGG 0.545410 4:-43022640 MsG0480020537.01.T01:CDS
CAGTTTGATGTTCTTTACAA+CGG 0.550867 4:-43023052 MsG0480020537.01.T01:CDS
AATGAAGAAGATAGGGAGGT+TGG 0.554718 4:-43022633 MsG0480020537.01.T01:CDS
GGCTTCCTCGTAAACAACTT+GGG 0.555138 4:+43018740 None:intergenic
TCTTCCAAACTGTGCAGCCA+TGG 0.557389 4:+43018833 None:intergenic
TAGCTTACAAGATTAGCAGT+TGG 0.558221 4:+43022532 None:intergenic
CATTCTCAGCAAATTGGCCA+TGG 0.562379 4:+43020562 None:intergenic
GGATATCTCTTTGTACCCAA+GGG 0.562534 4:+43020222 None:intergenic
CCCACAAACTAGCGTACACC+TGG 0.564764 4:+43020103 None:intergenic
AGTGTCGCAGCCAAAATGCC+AGG 0.566462 4:+43020060 None:intergenic
CTTGGTTGAGTTCTTCAACA+AGG 0.569902 4:-43018911 MsG0480020537.01.T01:three_prime_UTR
GTTACTTTGTGCTTGAAACA+CGG 0.571131 4:+43019009 None:intergenic
TCTCTTGGAGAAGTTCTCAA+TGG 0.576224 4:-43023316 MsG0480020537.01.T01:CDS
CGATAAATGCTAGGAACAGA+AGG 0.576371 4:+43020682 None:intergenic
GACATATGTTCAACTATCTG+TGG 0.579107 4:-43019995 MsG0480020537.01.T01:CDS
CCGAATCAAGACTAAATCCA+TGG 0.588570 4:-43018850 MsG0480020537.01.T01:three_prime_UTR
TGCAGATCTGTGCTGTGTGG+TGG 0.593952 4:-43019236 MsG0480020537.01.T01:intron
TGGAAGACCATGAATGGTGG+TGG 0.594903 4:-43019975 MsG0480020537.01.T01:CDS
AGAGGGTACCGATAAATGCT+AGG 0.595736 4:+43020673 None:intergenic
CAAAGAAACTCGGAAACTGA+TGG 0.597898 4:+43019079 None:intergenic
ATCACAATAATAGAGCCCAA+TGG 0.600900 4:+43020330 None:intergenic
GTAGATATAACCAAGGATGT+TGG 0.604247 4:-43022983 MsG0480020537.01.T01:CDS
GAAAGTTTGATTCATGGTGG+GGG 0.605503 4:-43023106 MsG0480020537.01.T01:CDS
GCTTTAGGTGAAGAGATGAG+TGG 0.607751 4:-43018810 MsG0480020537.01.T01:three_prime_UTR
AACCAAATTACACTTTGGAG+TGG 0.612655 4:+43018670 None:intergenic
TATGCAAGATCAAGAATGAG+TGG 0.612657 4:-43019173 MsG0480020537.01.T01:CDS
AAGATATTGCAATAATGTTG+AGG 0.614798 4:+43020373 None:intergenic
ATTCTCAAACCGTAATTCAG+TGG 0.618167 4:+43022922 None:intergenic
GTTGGTTGGAAGTCAATCCA+TGG 0.623172 4:-43022615 MsG0480020537.01.T01:CDS
GATCCCATTACTCGCATTCG+GGG 0.626900 4:-43020283 MsG0480020537.01.T01:CDS
GATGAAAGTTTGATTCATGG+TGG 0.627468 4:-43023109 MsG0480020537.01.T01:CDS
ACCACGACTGTATGGATAGA+GGG 0.629185 4:+43020656 None:intergenic
TATCTGTGGAAGACCATGAA+TGG 0.629462 4:-43019981 MsG0480020537.01.T01:CDS
GTCGTGGTGGACTCTCAAGT+TGG 0.630587 4:-43020641 MsG0480020537.01.T01:CDS
CTCTATCCATACAGTCGTGG+TGG 0.632533 4:-43020654 MsG0480020537.01.T01:CDS
ATAGAGAATGCAACAAACAC+CGG 0.633680 4:+43020396 None:intergenic
CGCAAATGAAGAAGATAGGG+AGG 0.637904 4:-43022637 MsG0480020537.01.T01:CDS
AATTGTCCTGCAATTACACC+AGG 0.641702 4:-43020121 MsG0480020537.01.T01:CDS
ATCCCATTACTCGCATTCGG+GGG 0.641707 4:-43020282 MsG0480020537.01.T01:CDS
ACCCTCTATCCATACAGTCG+TGG 0.643506 4:-43020657 MsG0480020537.01.T01:CDS
AAGACCATGAATGGTGGTGG+AGG 0.651799 4:-43019972 MsG0480020537.01.T01:intron
CAGGTGTACGCTAGTTTGTG+GGG 0.666363 4:-43020102 MsG0480020537.01.T01:CDS
TAAGTCCCAAGTTGTTTACG+AGG 0.667389 4:-43018745 MsG0480020537.01.T01:three_prime_UTR
CCAATTTGCTGAGAATGGAT+GGG 0.667467 4:-43020556 MsG0480020537.01.T01:intron
GAACAAATAGCAAAGAAACT+CGG 0.671083 4:+43019069 None:intergenic
AACGGTGTTCTCCTGTACCA+AGG 0.673640 4:+43020180 None:intergenic
GAGCGCAACAATCACAATGA+CGG 0.674592 4:+43020032 None:intergenic
GTGTGCAGATCTGTGCTGTG+TGG 0.676378 4:-43019239 MsG0480020537.01.T01:intron
GGTGATTAGACACACGATGG+AGG 0.681443 4:+43018691 None:intergenic
GATATCTCTTTGTACCCAAG+GGG 0.684564 4:+43020223 None:intergenic
GAGGCTTGAATACATCACCA+TGG 0.694814 4:+43022598 None:intergenic
TCGCGCTGTAGATATAACCA+AGG 0.701856 4:-43022990 MsG0480020537.01.T01:CDS
CTTGTTGAAGAACTCAACCA+AGG 0.706301 4:+43018912 None:intergenic
CTGTGGAAGACCATGAATGG+TGG 0.732393 4:-43019978 MsG0480020537.01.T01:CDS
AGTGGTGATTAGACACACGA+TGG 0.739577 4:+43018688 None:intergenic
GACACACAGAAGAAACTCCG+AGG 0.754884 4:-43025154 MsG0480020537.01.T01:CDS
ACACAGAAGAAACTCCGAGG+AGG 0.755077 4:-43025151 MsG0480020537.01.T01:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATGAAAATCAAATAATTA+AGG - Chr4:43020340-43020359 MsG0480020537.01.T01:CDS 10.0%
!! AATGAAAATCAAATAATTAA+GGG - Chr4:43020341-43020360 MsG0480020537.01.T01:CDS 10.0%
!! AATTAATATAATTCTTACAA+AGG + Chr4:43024482-43024501 None:intergenic 10.0%
!! GTTAAAAATGAAATAAAAAA+TGG + Chr4:43023257-43023276 None:intergenic 10.0%
!! AAAGAAAAATTGAATGAAAA+TGG + Chr4:43020055-43020074 None:intergenic 15.0%
!! ATCAAAATATGTATTTGATA+TGG - Chr4:43019368-43019387 MsG0480020537.01.T01:intron 15.0%
!! ATGAAAATCAAATAATTAAG+GGG - Chr4:43020342-43020361 MsG0480020537.01.T01:CDS 15.0%
!! ATTGTAAAATGAATTTAGTT+AGG + Chr4:43021080-43021099 None:intergenic 15.0%
!! TTAAATATTTCTTGATTGTT+TGG + Chr4:43021665-43021684 None:intergenic 15.0%
!!! CTAAATTCATTTTACAATTT+AGG - Chr4:43021082-43021101 MsG0480020537.01.T01:intron 15.0%
!!! TTCTTTTCAATTTAATTTCT+TGG - Chr4:43022960-43022979 MsG0480020537.01.T01:CDS 15.0%
!!! TTTTTTTTTTTTTTTTGTGG+TGG + Chr4:43019630-43019649 None:intergenic 15.0%
!! AAATAATTAAGGGGTTTAAT+TGG - Chr4:43020351-43020370 MsG0480020537.01.T01:CDS 20.0%
!! AACTATTAGGATTTAGAAAA+AGG - Chr4:43022266-43022285 MsG0480020537.01.T01:intron 20.0%
!! AATACATTTAATTGCTTCAA+AGG - Chr4:43024295-43024314 MsG0480020537.01.T01:intron 20.0%
!! ACATCTAATGTTCATATATT+AGG - Chr4:43024456-43024475 MsG0480020537.01.T01:intron 20.0%
!! AGAAAAAACATTAAAAGTGA+TGG + Chr4:43023844-43023863 None:intergenic 20.0%
!! ATTGTGATTCTTAGTTTATT+TGG - Chr4:43023435-43023454 MsG0480020537.01.T01:intron 20.0%
!! CAAATTACAAGTAAACTATT+AGG - Chr4:43022253-43022272 MsG0480020537.01.T01:intron 20.0%
!! GATGTTAATATTATGTATCT+AGG + Chr4:43018949-43018968 None:intergenic 20.0%
!! TGAAAATTGAATGAAAATAG+AGG + Chr4:43020017-43020036 None:intergenic 20.0%
!! TGATGTTAAATTCACTTATT+CGG - Chr4:43020793-43020812 MsG0480020537.01.T01:intron 20.0%
!! TGATTTCTATATTAGGATTT+AGG + Chr4:43022061-43022080 None:intergenic 20.0%
!!! ATTCTATCTTTTTCACTATT+GGG + Chr4:43020415-43020434 None:intergenic 20.0%
!!! ATTTTGTACAAGATAAGAAT+GGG - Chr4:43021519-43021538 MsG0480020537.01.T01:intron 20.0%
!!! GAAAAGAAATGACTATTTTA+TGG + Chr4:43022948-43022967 None:intergenic 20.0%
!!! TAATTTTTTTTTGGTTGCAT+AGG + Chr4:43019324-43019343 None:intergenic 20.0%
!!! TTTTGACATTATGGTATATA+CGG + Chr4:43024708-43024727 None:intergenic 20.0%
! AAAGTTAACGAGTTTATGTT+AGG + Chr4:43022988-43023007 None:intergenic 25.0%
! AAGATATTGCAATAATGTTG+AGG + Chr4:43023380-43023399 None:intergenic 25.0%
! AAGCTTACAATTGATGAAAT+TGG - Chr4:43020530-43020549 MsG0480020537.01.T01:intron 25.0%
! AATTCTATATGCATTTCTCA+AGG - Chr4:43023218-43023237 MsG0480020537.01.T01:CDS 25.0%
! ACATGCATATCTATCTATTT+GGG + Chr4:43024024-43024043 None:intergenic 25.0%
! ACATGCATTGTATGTATTTA+AGG + Chr4:43022027-43022046 None:intergenic 25.0%
! ACATTATTGCAATATCTTAC+AGG - Chr4:43023382-43023401 MsG0480020537.01.T01:intron 25.0%
! ACTTCTCTGATTTCTATATT+AGG + Chr4:43022068-43022087 None:intergenic 25.0%
! ATATCAATGTGATATCAATG+TGG + Chr4:43024140-43024159 None:intergenic 25.0%
! ATATTATGTATCTAGGTTGT+TGG + Chr4:43018942-43018961 None:intergenic 25.0%
! ATGATTCAATGACTTTGTTA+AGG + Chr4:43019440-43019459 None:intergenic 25.0%
! ATTAGGAGTTGAAACAATTA+AGG - Chr4:43019270-43019289 MsG0480020537.01.T01:intron 25.0%
! ATTTGATTACAAACATAGGT+TGG + Chr4:43021387-43021406 None:intergenic 25.0%
! CATGCATTGTATGTATTTAA+GGG + Chr4:43022026-43022045 None:intergenic 25.0%
! CATTATTGCAATATCTTACA+GGG - Chr4:43023383-43023402 MsG0480020537.01.T01:intron 25.0%
! CATTGAATCATTCAAAACTT+AGG - Chr4:43019449-43019468 MsG0480020537.01.T01:intron 25.0%
! CTACTTTGTTGACAAAAAAT+GGG + Chr4:43019958-43019977 None:intergenic 25.0%
! CTTTAATAAGAACAGGAATA+GGG - Chr4:43024318-43024337 MsG0480020537.01.T01:intron 25.0%
! GACAAAGAAATAGTTATAGT+TGG + Chr4:43023279-43023298 None:intergenic 25.0%
! GATTTGTGAAATCAAACATT+AGG - Chr4:43019253-43019272 MsG0480020537.01.T01:intron 25.0%
! TACATGCATATCTATCTATT+TGG + Chr4:43024025-43024044 None:intergenic 25.0%
! TAGAAAGATATCATGTTTCA+TGG + Chr4:43021900-43021919 None:intergenic 25.0%
! TATTAATGGTGTTCGATAAT+TGG + Chr4:43019301-43019320 None:intergenic 25.0%
! TGCATGACAAAATATTGTTT+AGG - Chr4:43018684-43018703 MsG0480020537.01.T01:three_prime_UTR 25.0%
! TGGTAATTCATAGTATTCAT+AGG + Chr4:43020102-43020121 None:intergenic 25.0%
! TGTAAAACCAAATTACACTT+TGG + Chr4:43025088-43025107 None:intergenic 25.0%
! TTAAGAGTAATTAGAGTAGT+TGG - Chr4:43022301-43022320 MsG0480020537.01.T01:intron 25.0%
! TTAAGAGTAGCATAAATGTT+AGG - Chr4:43021611-43021630 MsG0480020537.01.T01:intron 25.0%
! TTAGGAGTTGAAACAATTAA+GGG - Chr4:43019271-43019290 MsG0480020537.01.T01:intron 25.0%
! TTTGTATGAGTTCAAATTCA+GGG - Chr4:43020475-43020494 MsG0480020537.01.T01:intron 25.0%
!! AGTAAGTTGAATAAACTTGA+TGG - Chr4:43019746-43019765 MsG0480020537.01.T01:intron 25.0%
!! ATAAAAAAGGTTTAGCTTCT+AGG - Chr4:43018792-43018811 MsG0480020537.01.T01:three_prime_UTR 25.0%
!! CTTCATTCTATTAGTCATTT+TGG - Chr4:43019407-43019426 MsG0480020537.01.T01:intron 25.0%
!! GATATGATTTGTAGTAAGTT+TGG - Chr4:43021705-43021724 MsG0480020537.01.T01:intron 25.0%
!! GATTTTGTACAAGATAAGAA+TGG - Chr4:43021518-43021537 MsG0480020537.01.T01:intron 25.0%
!! TACGTAAGTTGAAAGAATTA+GGG + Chr4:43021858-43021877 None:intergenic 25.0%
!! TATCTCTATCTTTGTTTACT+AGG + Chr4:43024202-43024221 None:intergenic 25.0%
!! TGATTTTACTTAAGATGTCA+TGG + Chr4:43023924-43023943 None:intergenic 25.0%
!! TGTTCTCTTTTCTTTAATTC+TGG - Chr4:43024364-43024383 MsG0480020537.01.T01:intron 25.0%
!! TTTGATAACAGTTTATTCCT+TGG - Chr4:43024821-43024840 MsG0480020537.01.T01:intron 25.0%
!!! ACTTTGAAACTAAAGCTTAT+CGG + Chr4:43024229-43024248 None:intergenic 25.0%
!!! GATTCTATCTTTTTCACTAT+TGG + Chr4:43020416-43020435 None:intergenic 25.0%
!!! GCTAAACCTTTTTTATATAG+TGG + Chr4:43018788-43018807 None:intergenic 25.0%
!!! GTACACGACTAATTTTTTTT+TGG + Chr4:43019333-43019352 None:intergenic 25.0%
!!! TACAAGAGAAGATTTTTAGT+AGG - Chr4:43021037-43021056 MsG0480020537.01.T01:intron 25.0%
AAAACTAGAGGCTGAAAATT+TGG + Chr4:43021300-43021319 None:intergenic 30.0%
AACGAAGATTTGACAACAAA+TGG - Chr4:43019189-43019208 MsG0480020537.01.T01:CDS 30.0%
AATTCACTTATTCGGTTATC+TGG - Chr4:43020801-43020820 MsG0480020537.01.T01:intron 30.0%
ACAAATAAAAGAGGAAGTTG+AGG - Chr4:43019126-43019145 MsG0480020537.01.T01:CDS 30.0%
ACACCGTTTCAAATGTTTAT+TGG - Chr4:43023585-43023604 MsG0480020537.01.T01:intron 30.0%
ACATCATCAACCATTTGAAA+TGG - Chr4:43018964-43018983 MsG0480020537.01.T01:three_prime_UTR 30.0%
ACATCGACACTTCTAATAAA+AGG + Chr4:43020299-43020318 None:intergenic 30.0%
ACCTAGAACAAGAACTAATT+AGG - Chr4:43019723-43019742 MsG0480020537.01.T01:intron 30.0%
ACGGTAAGACAATGTTATAT+TGG + Chr4:43019548-43019567 None:intergenic 30.0%
ACTAACAGAATGAAGAATGA+GGG - Chr4:43019492-43019511 MsG0480020537.01.T01:intron 30.0%
AGATACCAGAAAAAGAATTG+AGG - Chr4:43021639-43021658 MsG0480020537.01.T01:intron 30.0%
AGTTAGAGGAATATGATACA+AGG - Chr4:43022784-43022803 MsG0480020537.01.T01:intron 30.0%
AGTTTGATGTTCTTTACAAC+GGG - Chr4:43020699-43020718 MsG0480020537.01.T01:intron 30.0%
ATCATTCAAAACTTAGGACT+AGG - Chr4:43019455-43019474 MsG0480020537.01.T01:intron 30.0%
ATGAAAGTTTGATTCATGGT+GGG - Chr4:43020642-43020661 MsG0480020537.01.T01:CDS 30.0%
ATTACGGTTTGAGAATAGAA+TGG - Chr4:43020835-43020854 MsG0480020537.01.T01:intron 30.0%
CAAACTGAACATGTGTAAAA+AGG + Chr4:43020685-43020704 None:intergenic 30.0%
CAATACCATGTAAAAACTAG+AGG + Chr4:43021312-43021331 None:intergenic 30.0%
CAATTTGCAATCAAACAAGT+TGG + Chr4:43025034-43025053 None:intergenic 30.0%
CAGGATTTGATTACAAACAT+AGG + Chr4:43021391-43021410 None:intergenic 30.0%
CAGTTTGATGTTCTTTACAA+CGG - Chr4:43020698-43020717 MsG0480020537.01.T01:intron 30.0%
CCTACTTTGTTGACAAAAAA+TGG + Chr4:43019959-43019978 None:intergenic 30.0%
CCTCCAATAAACATTTGAAA+CGG + Chr4:43023591-43023610 None:intergenic 30.0%
GAACAAATAGCAAAGAAACT+CGG + Chr4:43024684-43024703 None:intergenic 30.0%
GAACTACTTGGATTTGAAAA+AGG - Chr4:43020373-43020392 MsG0480020537.01.T01:CDS 30.0%
GAAGATGAAAGTTTGATTCA+TGG - Chr4:43020638-43020657 MsG0480020537.01.T01:CDS 30.0%
GAATATGATACAAGGATAGA+GGG - Chr4:43022792-43022811 MsG0480020537.01.T01:intron 30.0%
GAGCAACCACTATATAAAAA+AGG - Chr4:43018779-43018798 MsG0480020537.01.T01:three_prime_UTR 30.0%
GCTTTAATAAGAACAGGAAT+AGG - Chr4:43024317-43024336 MsG0480020537.01.T01:intron 30.0%
GTGAAAAAGATAGAATCTCT+TGG - Chr4:43020419-43020438 MsG0480020537.01.T01:CDS 30.0%
GTTGAAGAAAACACAATCTA+TGG - Chr4:43019826-43019845 MsG0480020537.01.T01:intron 30.0%
GTTTGTATGAGTTCAAATTC+AGG - Chr4:43020474-43020493 MsG0480020537.01.T01:intron 30.0%
TAAAGAAAGAGAATGGAAGA+AGG - Chr4:43019216-43019235 MsG0480020537.01.T01:CDS 30.0%
TACAAAATATACACTCTTCC+TGG - Chr4:43023672-43023691 MsG0480020537.01.T01:intron 30.0%
TAGGAGTTGAAACAATTAAG+GGG - Chr4:43019272-43019291 MsG0480020537.01.T01:intron 30.0%
TAGTTTCAAAGTTTGCACAT+AGG - Chr4:43024237-43024256 MsG0480020537.01.T01:intron 30.0%
TATGCTTTCTTCCTGATATT+TGG - Chr4:43024646-43024665 MsG0480020537.01.T01:intron 30.0%
TCAAGTACACAATCAAAAGA+AGG + Chr4:43023879-43023898 None:intergenic 30.0%
TGATGAAATTGGTATCTTGA+AGG - Chr4:43020541-43020560 MsG0480020537.01.T01:intron 30.0%
TTAAGATGTCATGGCTATTA+AGG + Chr4:43023915-43023934 None:intergenic 30.0%
TTACAGCTATCCTTCTTTAT+TGG - Chr4:43024604-43024623 MsG0480020537.01.T01:intron 30.0%
TTGTGTATCGTAAAGTTCAT+TGG - Chr4:43020885-43020904 MsG0480020537.01.T01:intron 30.0%
TTGTTTAGAAAATGAGCCTA+GGG + Chr4:43018882-43018901 None:intergenic 30.0%
TTTCAAGCACAAAGTAACAT+TGG - Chr4:43024746-43024765 MsG0480020537.01.T01:intron 30.0%
TTTGGTTGCATAGGTATTAA+TGG + Chr4:43019315-43019334 None:intergenic 30.0%
! CAAAACCTCAACTTTTGAAT+TGG + Chr4:43022543-43022562 None:intergenic 30.0%
! CAATTCAAGTTAGAAGAGTA+CGG - Chr4:43019103-43019122 MsG0480020537.01.T01:CDS 30.0%
! CTATCTTTGTTTACTAGGAT+GGG + Chr4:43024197-43024216 None:intergenic 30.0%
! CTCTTGATTTTTGCTTTCAT+TGG - Chr4:43021467-43021486 MsG0480020537.01.T01:intron 30.0%
! GTACGTAAGTTGAAAGAATT+AGG + Chr4:43021859-43021878 None:intergenic 30.0%
! TCAAAGGCTTTAATAAGAAC+AGG - Chr4:43024311-43024330 MsG0480020537.01.T01:intron 30.0%
! TCCTAATTAGTTCTTGTTCT+AGG + Chr4:43019727-43019746 None:intergenic 30.0%
! TCGTTGTTTAGTCTTCTATT+TGG + Chr4:43019174-43019193 None:intergenic 30.0%
! TCTATCTTTGTTTACTAGGA+TGG + Chr4:43024198-43024217 None:intergenic 30.0%
! TGACAAACCAAAGTGTATTT+TGG + Chr4:43019600-43019619 None:intergenic 30.0%
! TTGTTTAGTCTTCTATTTGG+TGG + Chr4:43019171-43019190 None:intergenic 30.0%
! TTTTATATAGTGGTTGCTCT+AGG + Chr4:43018778-43018797 None:intergenic 30.0%
! TTTTCTCACGTTACACAAAT+GGG + Chr4:43022132-43022151 None:intergenic 30.0%
! TTTTTCTCACGTTACACAAA+TGG + Chr4:43022133-43022152 None:intergenic 30.0%
!! AGAGGAGTATTTGTGTAAAT+AGG - Chr4:43022338-43022357 MsG0480020537.01.T01:intron 30.0%
!! CATTTTCTAAACAAGAGTGT+TGG - Chr4:43018888-43018907 MsG0480020537.01.T01:three_prime_UTR 30.0%
!! TATTAGAAGTGTCGATGTTA+CGG - Chr4:43020301-43020320 MsG0480020537.01.T01:CDS 30.0%
!!! ACCAAAGTGTATTTTGGTTT+TGG + Chr4:43019594-43019613 None:intergenic 30.0%
!!! CCAAAGTGTATTTTGGTTTT+GGG + Chr4:43019593-43019612 None:intergenic 30.0%
!!! CCATTTTTTGTCAACAAAGT+AGG - Chr4:43019956-43019975 MsG0480020537.01.T01:intron 30.0%
!!! TCCTTATTTTTTGCTGTTGT+GGG - Chr4:43021186-43021205 MsG0480020537.01.T01:intron 30.0%
AACATCAATACCAACATCCT+TGG + Chr4:43020780-43020799 None:intergenic 35.0%
AACGGTAGAAGATTGTAGAA+TGG + Chr4:43019891-43019910 None:intergenic 35.0%
AACGTTGTAGATGTGATTTG+AGG + Chr4:43019924-43019943 None:intergenic 35.0%
AAGCATTTACCTACTAGACA+GGG + Chr4:43021749-43021768 None:intergenic 35.0%
AATCAAAAGAAGGAAGCTAG+GGG + Chr4:43023869-43023888 None:intergenic 35.0%
AATGTGGATATTAAGCCATG+AGG + Chr4:43024124-43024143 None:intergenic 35.0%
ACAAACACAGCATTTAGTCA+AGG + Chr4:43021980-43021999 None:intergenic 35.0%
ACAATCAAAAGAAGGAAGCT+AGG + Chr4:43023871-43023890 None:intergenic 35.0%
ACCATAACCGAACATGAAAA+TGG + Chr4:43024548-43024567 None:intergenic 35.0%
AGAGTACGGACAAATAAAAG+AGG - Chr4:43019117-43019136 MsG0480020537.01.T01:CDS 35.0%
AGCTTACAAGATTAGCAGTT+GGG + Chr4:43021220-43021239 None:intergenic 35.0%
AGGGAATTAAGACTCACAAA+AGG + Chr4:43021960-43021979 None:intergenic 35.0%
ATAACACAACTTCATGCAAG+GGG + Chr4:43022650-43022669 None:intergenic 35.0%
ATAGAGAATGCAACAAACAC+CGG + Chr4:43023357-43023376 None:intergenic 35.0%
ATCACAATAATAGAGCCCAA+TGG + Chr4:43023423-43023442 None:intergenic 35.0%
ATTAACCGATACTACACTAG+AGG + Chr4:43023997-43024016 None:intergenic 35.0%
ATTAAGCCATGAGGATGAAT+CGG + Chr4:43024115-43024134 None:intergenic 35.0%
ATTCTCAAACCGTAATTCAG+TGG + Chr4:43020831-43020850 None:intergenic 35.0%
ATTGTAGAATGGTGAAGATG+AGG + Chr4:43019880-43019899 None:intergenic 35.0%
ATTGTTGCGCTCGTAAATAT+TGG - Chr4:43023729-43023748 MsG0480020537.01.T01:intron 35.0%
CAAACACAGCATTTAGTCAA+GGG + Chr4:43021979-43021998 None:intergenic 35.0%
CAAATGTCTCGTATAAAGCA+GGG + Chr4:43020963-43020982 None:intergenic 35.0%
CAATCAAAAGAAGGAAGCTA+GGG + Chr4:43023870-43023889 None:intergenic 35.0%
CAGATGAAAGAGTGAATAGA+AGG + Chr4:43023140-43023159 None:intergenic 35.0%
CCCAAAACCAAAATACACTT+TGG - Chr4:43019590-43019609 MsG0480020537.01.T01:intron 35.0%
CCGTTTCAAATGTTTATTGG+AGG - Chr4:43023588-43023607 MsG0480020537.01.T01:intron 35.0%
CGTACTCTTCTAACTTGAAT+TGG + Chr4:43019105-43019124 None:intergenic 35.0%
CTTCTGTTCCTAGCATTTAT+CGG - Chr4:43023069-43023088 MsG0480020537.01.T01:CDS 35.0%
CTTGTTTAGAAAATGAGCCT+AGG + Chr4:43018883-43018902 None:intergenic 35.0%
GACATATGTTCAACTATCTG+TGG - Chr4:43023755-43023774 MsG0480020537.01.T01:intron 35.0%
GACTAACAGAATGAAGAATG+AGG - Chr4:43019491-43019510 MsG0480020537.01.T01:intron 35.0%
GACTTAAATTGTAACTGACC+TGG + Chr4:43020134-43020153 None:intergenic 35.0%
GAGTAATTAGAGTAGTTGGT+TGG - Chr4:43022305-43022324 MsG0480020537.01.T01:intron 35.0%
GATAACACAACTTCATGCAA+GGG + Chr4:43022651-43022670 None:intergenic 35.0%
GATGAAAGTTTGATTCATGG+TGG - Chr4:43020641-43020660 MsG0480020537.01.T01:CDS 35.0%
GATTGATGAACTCTTCTCTT+TGG - Chr4:43024780-43024799 MsG0480020537.01.T01:intron 35.0%
GGAATATGATACAAGGATAG+AGG - Chr4:43022791-43022810 MsG0480020537.01.T01:intron 35.0%
GGAGTTTCATGACTTATAAC+AGG - Chr4:43019767-43019786 MsG0480020537.01.T01:intron 35.0%
GTAAGTTTGGTTGATCCATA+AGG - Chr4:43021718-43021737 MsG0480020537.01.T01:intron 35.0%
GTAGATATAACCAAGGATGT+TGG - Chr4:43020767-43020786 MsG0480020537.01.T01:intron 35.0%
GTAGTCCAATTCAAAAGTTG+AGG - Chr4:43022535-43022554 MsG0480020537.01.T01:intron 35.0%
GTCTAGATTAAGATTGCTAC+AGG + Chr4:43021410-43021429 None:intergenic 35.0%
GTTAGGATGTAGAATAGTGA+AGG - Chr4:43022743-43022762 MsG0480020537.01.T01:intron 35.0%
TAATCACATGTGTCACATGT+CGG - Chr4:43020261-43020280 MsG0480020537.01.T01:CDS 35.0%
TAGCGCAAATGAAGAAGATA+GGG - Chr4:43021110-43021129 MsG0480020537.01.T01:intron 35.0%
TAGCTTACAAGATTAGCAGT+TGG + Chr4:43021221-43021240 None:intergenic 35.0%
TATGCAAGATCAAGAATGAG+TGG - Chr4:43024577-43024596 MsG0480020537.01.T01:intron 35.0%
TATGCATGTAACTGATCTTG+TGG - Chr4:43024035-43024054 MsG0480020537.01.T01:intron 35.0%
TCAAATCACATCTACAACGT+TGG - Chr4:43019923-43019942 MsG0480020537.01.T01:intron 35.0%
TCAAATGTCTCGTATAAAGC+AGG + Chr4:43020964-43020983 None:intergenic 35.0%
TCACAATAATAGAGCCCAAT+GGG + Chr4:43023422-43023441 None:intergenic 35.0%
TCAGGGACATCTGATAAAAT+TGG + Chr4:43022217-43022236 None:intergenic 35.0%
TCCCACAACAGCAAAAAATA+AGG + Chr4:43021190-43021209 None:intergenic 35.0%
TGAAACCTCTAGTGTAGTAT+CGG - Chr4:43023989-43024008 MsG0480020537.01.T01:intron 35.0%
TGAAAGTTTGATTCATGGTG+GGG - Chr4:43020643-43020662 MsG0480020537.01.T01:CDS 35.0%
TGACTTATAACAGGTGTAAG+AGG - Chr4:43019776-43019795 MsG0480020537.01.T01:intron 35.0%
TGATAACACAACTTCATGCA+AGG + Chr4:43022652-43022671 None:intergenic 35.0%
TGGAAGCTAAAGAAAGAGAA+TGG - Chr4:43019209-43019228 MsG0480020537.01.T01:CDS 35.0%
TGTGTAAATAGGAGGATACA+AGG - Chr4:43022349-43022368 MsG0480020537.01.T01:intron 35.0%
TTGTACAAGATAAGAATGGG+TGG - Chr4:43021522-43021541 MsG0480020537.01.T01:intron 35.0%
TTGTAGAAGTGGAAACTCTT+GGG - Chr4:43022870-43022889 MsG0480020537.01.T01:intron 35.0%
TTGTCATGCATGTCAATGAT+TGG + Chr4:43018674-43018693 None:intergenic 35.0%
TTTCAAAGTTTGCACATAGG+AGG - Chr4:43024240-43024259 MsG0480020537.01.T01:intron 35.0%
! AAAGCATTTACCTACTAGAC+AGG + Chr4:43021750-43021769 None:intergenic 35.0%
! AACCAAATTACACTTTGGAG+TGG + Chr4:43025083-43025102 None:intergenic 35.0%
! ATCTTGACGATCTTCCATTT+TGG - Chr4:43020597-43020616 MsG0480020537.01.T01:CDS 35.0%
! ATTTTATCAGATGTCCCTGA+AGG - Chr4:43022217-43022236 MsG0480020537.01.T01:intron 35.0%
! CAAAAGCAAAATGATGACGA+TGG + Chr4:43020927-43020946 None:intergenic 35.0%
! CATCGTCATCATTTTGCTTT+TGG - Chr4:43020925-43020944 MsG0480020537.01.T01:intron 35.0%
! CTAGGATTTTGTCCTGAAAT+GGG + Chr4:43018760-43018779 None:intergenic 35.0%
! CTCACTCTCTTTTGACATTA+TGG + Chr4:43024717-43024736 None:intergenic 35.0%
! GATTTTTGCGTAAGGTGATT+TGG - Chr4:43021548-43021567 MsG0480020537.01.T01:intron 35.0%
! GCTTTTATTGTTGTAACCAG+AGG - Chr4:43021765-43021784 MsG0480020537.01.T01:intron 35.0%
! GGAGTATTTGTGTAAATAGG+AGG - Chr4:43022341-43022360 MsG0480020537.01.T01:intron 35.0%
! GTTACTTTGTGCTTGAAACA+CGG + Chr4:43024744-43024763 None:intergenic 35.0%
! TAACATATGCACTTTTCTGC+AGG - Chr4:43023037-43023056 MsG0480020537.01.T01:CDS 35.0%
! TCTTGACGATCTTCCATTTT+GGG - Chr4:43020598-43020617 MsG0480020537.01.T01:CDS 35.0%
! TGATCTTGTGGTTTTCTGTA+GGG - Chr4:43024047-43024066 MsG0480020537.01.T01:intron 35.0%
! TTTGGCCTCAATTCTTTTTC+TGG + Chr4:43021647-43021666 None:intergenic 35.0%
! TTTTATCAGATGTCCCTGAA+GGG - Chr4:43022218-43022237 MsG0480020537.01.T01:intron 35.0%
!! AAGAGAAAAAAGAGTGCTTC+TGG + Chr4:43021452-43021471 None:intergenic 35.0%
!! AAGGTTTAGCTTCTAGGATA+AGG - Chr4:43018798-43018817 MsG0480020537.01.T01:three_prime_UTR 35.0%
!! AGGTTTAGCTTCTAGGATAA+GGG - Chr4:43018799-43018818 MsG0480020537.01.T01:three_prime_UTR 35.0%
!! CCATGGATTTAGTCTTGATT+CGG + Chr4:43024903-43024922 None:intergenic 35.0%
!! GAGTAATTGGATATCGGTTT+AGG - Chr4:43023490-43023509 MsG0480020537.01.T01:intron 35.0%
!! TCAACAGCCATTTTCATGTT+CGG - Chr4:43024538-43024557 MsG0480020537.01.T01:intron 35.0%
!! TCTAGGATTTTGTCCTGAAA+TGG + Chr4:43018761-43018780 None:intergenic 35.0%
!! TTTTGCTTTCATTGGTCTGT+TGG - Chr4:43021475-43021494 MsG0480020537.01.T01:intron 35.0%
!!! ACTCTTTCATCTGTTTTTGC+TGG - Chr4:43023147-43023166 MsG0480020537.01.T01:CDS 35.0%
!!! ATTTTTTGCTGTTGTGGGAA+TGG - Chr4:43021191-43021210 MsG0480020537.01.T01:intron 35.0%
!!! CTCTTTCATCTGTTTTTGCT+GGG - Chr4:43023148-43023167 MsG0480020537.01.T01:CDS 35.0%
!!! GTCCTTATTTTTTGCTGTTG+TGG - Chr4:43021185-43021204 MsG0480020537.01.T01:intron 35.0%
!!! TTCAGCCTCTAGTTTTTACA+TGG - Chr4:43021304-43021323 MsG0480020537.01.T01:intron 35.0%
!!! TTTTTTGCTGTTGTGGGAAT+GGG - Chr4:43021192-43021211 MsG0480020537.01.T01:intron 35.0%
AACATTGTCTTACCGTGTCA+GGG - Chr4:43019552-43019571 MsG0480020537.01.T01:intron 40.0%
AACTGATGGCACCAAATATC+AGG + Chr4:43024660-43024679 None:intergenic 40.0%
AAGAGATTCAACAGCTTCCT+TGG - Chr4:43023553-43023572 MsG0480020537.01.T01:intron 40.0%
AAGGGGTAAGAACTTCTTTC+TGG + Chr4:43022633-43022652 None:intergenic 40.0%
AATGAAGAAGATAGGGAGGT+TGG - Chr4:43021117-43021136 MsG0480020537.01.T01:intron 40.0%
AATGGTGATCGTTTGAGCAA+TGG - Chr4:43020452-43020471 MsG0480020537.01.T01:intron 40.0%
AATTCGAGGCCAAAGTTCAT+TGG - Chr4:43022494-43022513 MsG0480020537.01.T01:intron 40.0%
AATTGTCCTGCAATTACACC+AGG - Chr4:43023629-43023648 MsG0480020537.01.T01:intron 40.0%
ACAAGATAAGAATGGGTGGT+AGG - Chr4:43021526-43021545 MsG0480020537.01.T01:intron 40.0%
ACCAAAATCAGTGTCGTATC+CGG + Chr4:43020211-43020230 None:intergenic 40.0%
ACTTAGGACTAGGCATCTAA+TGG - Chr4:43019465-43019484 MsG0480020537.01.T01:intron 40.0%
AGAGATGAGTGGAATGATAG+AGG - Chr4:43024951-43024970 MsG0480020537.01.T01:intron 40.0%
AGCAGTGACTCTGTTGTAAA+AGG - Chr4:43022415-43022434 MsG0480020537.01.T01:intron 40.0%
ATGAACTTTGGCCTCGAATT+AGG + Chr4:43022494-43022513 None:intergenic 40.0%
ATGAGACATCACCTTAGGAA+GGG + Chr4:43018631-43018650 None:intergenic 40.0%
ATGATACAAGGATAGAGGGA+AGG - Chr4:43022796-43022815 MsG0480020537.01.T01:intron 40.0%
ATTATCATTGCCCCTTCACA+AGG + Chr4:43022179-43022198 None:intergenic 40.0%
ATTCGAGGCCAAAGTTCATT+GGG - Chr4:43022495-43022514 MsG0480020537.01.T01:intron 40.0%
CAAAGAAACTCGGAAACTGA+TGG + Chr4:43024674-43024693 None:intergenic 40.0%
CAACGGGAATCAAATTCTTG+TGG - Chr4:43022691-43022710 MsG0480020537.01.T01:intron 40.0%
CACAAGAATTTGATTCCCGT+TGG + Chr4:43022693-43022712 None:intergenic 40.0%
CACCACTCCAAAGTGTAATT+TGG - Chr4:43025078-43025097 MsG0480020537.01.T01:intron 40.0%
CAGTGACTCTGTTGTAAAAG+GGG - Chr4:43022417-43022436 MsG0480020537.01.T01:intron 40.0%
CCGAATCAAGACTAAATCCA+TGG - Chr4:43024900-43024919 MsG0480020537.01.T01:intron 40.0%
CGATAAATGCTAGGAACAGA+AGG + Chr4:43023071-43023090 None:intergenic 40.0%
CGCATTGTAGCCAATAAAGA+AGG + Chr4:43024617-43024636 None:intergenic 40.0%
CTAGCGCAAATGAAGAAGAT+AGG - Chr4:43021109-43021128 MsG0480020537.01.T01:intron 40.0%
CTAGCTGGGATTCTTTACAT+TGG - Chr4:43023330-43023349 MsG0480020537.01.T01:CDS 40.0%
CTTGGTTGAGTTCTTCAACA+AGG - Chr4:43024839-43024858 MsG0480020537.01.T01:intron 40.0%
CTTGTTGAAGAACTCAACCA+AGG + Chr4:43024841-43024860 None:intergenic 40.0%
GAAAGTTTGATTCATGGTGG+GGG - Chr4:43020644-43020663 MsG0480020537.01.T01:CDS 40.0%
GAAGAAGGTGATAGAGATGA+AGG - Chr4:43019231-43019250 MsG0480020537.01.T01:CDS 40.0%
GAATTACCATTCTGCAAACC+AGG - Chr4:43020113-43020132 MsG0480020537.01.T01:CDS 40.0%
GAGATGAGTGGAATGATAGA+GGG - Chr4:43024952-43024971 MsG0480020537.01.T01:intron 40.0%
GAGGATGAATCGGATTAACA+GGG + Chr4:43024105-43024124 None:intergenic 40.0%
GATATCTCTTTGTACCCAAG+GGG + Chr4:43023530-43023549 None:intergenic 40.0%
GATTGGACATTACATGATCG+TGG + Chr4:43018657-43018676 None:intergenic 40.0%
GCAAAAAATAAGGACGAGTG+CGG + Chr4:43021180-43021199 None:intergenic 40.0%
GCAGTGACTCTGTTGTAAAA+GGG - Chr4:43022416-43022435 MsG0480020537.01.T01:intron 40.0%
GGAAGCTGTTGAATCTCTTT+CGG + Chr4:43023552-43023571 None:intergenic 40.0%
GGAATCAAATTCTTGTGGTG+GGG - Chr4:43022696-43022715 MsG0480020537.01.T01:intron 40.0%
GGATATCTCTTTGTACCCAA+GGG + Chr4:43023531-43023550 None:intergenic 40.0%
GGGAATCAAATTCTTGTGGT+GGG - Chr4:43022695-43022714 MsG0480020537.01.T01:intron 40.0%
GGGGTTTAATTGGAACTACT+TGG - Chr4:43020361-43020380 MsG0480020537.01.T01:CDS 40.0%
GTGAAGAGAATTGTTGACCT+GGG + Chr4:43019995-43020014 None:intergenic 40.0%
GTTAATCCGATTCATCCTCA+TGG - Chr4:43024106-43024125 MsG0480020537.01.T01:intron 40.0%
GTTATATCTACAGCGCGATT+TGG + Chr4:43020758-43020777 None:intergenic 40.0%
GTTATCAAGCTCCCAACATT+GGG - Chr4:43022665-43022684 MsG0480020537.01.T01:intron 40.0%
GTTGTAAAAGGGGAAATCCT+TGG - Chr4:43022427-43022446 MsG0480020537.01.T01:intron 40.0%
GTTGTAGAAGTGGAAACTCT+TGG - Chr4:43022869-43022888 MsG0480020537.01.T01:intron 40.0%
TAACATTGTCTTACCGTGTC+AGG - Chr4:43019551-43019570 MsG0480020537.01.T01:intron 40.0%
TAAGTCCCAAGTTGTTTACG+AGG - Chr4:43025005-43025024 MsG0480020537.01.T01:intron 40.0%
TACTTAACTGCATCCTTCCA+TGG - Chr4:43023171-43023190 MsG0480020537.01.T01:CDS 40.0%
TAGAAAATGAGCCTAGGGTT+TGG + Chr4:43018877-43018896 None:intergenic 40.0%
TATCTGTGGAAGACCATGAA+TGG - Chr4:43023769-43023788 MsG0480020537.01.T01:intron 40.0%
TCTCTTGGAGAAGTTCTCAA+TGG - Chr4:43020434-43020453 MsG0480020537.01.T01:CDS 40.0%
TGAGGATGAATCGGATTAAC+AGG + Chr4:43024106-43024125 None:intergenic 40.0%
TGATTCGAAAGACCCATTTC+AGG - Chr4:43018745-43018764 MsG0480020537.01.T01:three_prime_UTR 40.0%
TGCAGGACAATTGCACTAAA+AGG + Chr4:43023621-43023640 None:intergenic 40.0%
TGGGATTCTTTACATTGGTC+CGG - Chr4:43023335-43023354 MsG0480020537.01.T01:CDS 40.0%
TGTAGAAGTGGAAACTCTTG+GGG - Chr4:43022871-43022890 MsG0480020537.01.T01:intron 40.0%
TGTTATCAAGCTCCCAACAT+TGG - Chr4:43022664-43022683 MsG0480020537.01.T01:intron 40.0%
TTTATCAGATGTCCCTGAAG+GGG - Chr4:43022219-43022238 MsG0480020537.01.T01:intron 40.0%
TTTGTCTTGACTATGACTCC+AGG - Chr4:43023293-43023312 MsG0480020537.01.T01:CDS 40.0%
! AGAGTAGTTGGTTGGTTAGT+CGG - Chr4:43022313-43022332 MsG0480020537.01.T01:intron 40.0%
! ATACACTCTTCCTGGCATTT+TGG - Chr4:43023680-43023699 MsG0480020537.01.T01:intron 40.0%
! CTGATCTTGTGGTTTTCTGT+AGG - Chr4:43024046-43024065 MsG0480020537.01.T01:intron 40.0%
! CTTCTAATAAAAGGCGTGTC+CGG + Chr4:43020290-43020309 None:intergenic 40.0%
! CTTGACGATCTTCCATTTTG+GGG - Chr4:43020599-43020618 MsG0480020537.01.T01:CDS 40.0%
! GATCTTGTGGTTTTCTGTAG+GGG - Chr4:43024048-43024067 MsG0480020537.01.T01:intron 40.0%
! TAGAGCAGTTGGTTAGTTAG+AGG - Chr4:43022770-43022789 MsG0480020537.01.T01:intron 40.0%
! TCTGGAATGCCACTGAATTA+CGG - Chr4:43020819-43020838 MsG0480020537.01.T01:intron 40.0%
! TTGACGATCTTCCATTTTGG+GGG - Chr4:43020600-43020619 MsG0480020537.01.T01:CDS 40.0%
! TTGGTGTTCGTTGTGTGTTA+CGG - Chr4:43018907-43018926 MsG0480020537.01.T01:three_prime_UTR 40.0%
! TTTCATTGGTCTGTTGGTGT+GGG - Chr4:43021481-43021500 MsG0480020537.01.T01:intron 40.0%
!! AAAGCTGGTGCCATTTCAAA+TGG + Chr4:43018977-43018996 None:intergenic 40.0%
!! AGAAGAGTGTTAGTCTAGCT+GGG - Chr4:43023316-43023335 MsG0480020537.01.T01:CDS 40.0%
!! ATTTGAGGTTGATGCGGTAA+CGG + Chr4:43019909-43019928 None:intergenic 40.0%
!! CCAATTTGCTGAGAATGGAT+GGG - Chr4:43023194-43023213 MsG0480020537.01.T01:CDS 40.0%
!! GATGTGATTTGAGGTTGATG+CGG + Chr4:43019915-43019934 None:intergenic 40.0%
!! GCCATTTTCATGTTCGGTTA+TGG - Chr4:43024544-43024563 MsG0480020537.01.T01:intron 40.0%
!! GTCGTAGAAGTGAAAGCATT+TGG - Chr4:43020728-43020747 MsG0480020537.01.T01:intron 40.0%
AAAAATAAGGACGAGTGCGG+AGG + Chr4:43021177-43021196 None:intergenic 45.0%
AAATCCATGGCTGCACAGTT+TGG - Chr4:43024913-43024932 MsG0480020537.01.T01:intron 45.0%
AATTGGACTACACGTGCCTT+GGG + Chr4:43022526-43022545 None:intergenic 45.0%
ACCACGACTGTATGGATAGA+GGG + Chr4:43023097-43023116 None:intergenic 45.0%
AGAAGGAGAATGAGGTGATG+GGG + Chr4:43019857-43019876 None:intergenic 45.0%
AGATGAGGAGAAGGAGAATG+AGG + Chr4:43019865-43019884 None:intergenic 45.0%
AGTGGTGATTAGACACACGA+TGG + Chr4:43025065-43025084 None:intergenic 45.0%
ATATCTTACAGGGTCACAGC+TGG - Chr4:43023393-43023412 MsG0480020537.01.T01:intron 45.0%
ATTGCGTGTCATCCTTGTGA+AGG - Chr4:43022164-43022183 MsG0480020537.01.T01:intron 45.0%
CAAGTAACAAAGTCTGCCTC+TGG + Chr4:43021784-43021803 None:intergenic 45.0%
CACTTCTCCTGAGATTAGGA+GGG + Chr4:43024080-43024099 None:intergenic 45.0%
CATTCTCAGCAAATTGGCCA+TGG + Chr4:43023191-43023210 None:intergenic 45.0%
CCCATCCATTCTCAGCAAAT+TGG + Chr4:43023197-43023216 None:intergenic 45.0%
CGCAAATGAAGAAGATAGGG+AGG - Chr4:43021113-43021132 MsG0480020537.01.T01:intron 45.0%
CGGATATCTCTTTGTACCCA+AGG + Chr4:43023532-43023551 None:intergenic 45.0%
CGGGAATCAAATTCTTGTGG+TGG - Chr4:43022694-43022713 MsG0480020537.01.T01:intron 45.0%
CTAGACTAACACTCTTCTCC+TGG + Chr4:43023314-43023333 None:intergenic 45.0%
GAAAAGAGAACACAGTGCAG+AGG + Chr4:43024356-43024375 None:intergenic 45.0%
GAATGGTGAAGATGAGGAGA+AGG + Chr4:43019874-43019893 None:intergenic 45.0%
GACTGCACACGTTTAACTCT+AGG - Chr4:43018831-43018850 MsG0480020537.01.T01:three_prime_UTR 45.0%
GAGAAGGAGAATGAGGTGAT+GGG + Chr4:43019858-43019877 None:intergenic 45.0%
GAGCGCAACAATCACAATGA+CGG + Chr4:43023721-43023740 None:intergenic 45.0%
GAGGCTTGAATACATCACCA+TGG + Chr4:43021155-43021174 None:intergenic 45.0%
GAGTGGAATGATAGAGGGTA+GGG - Chr4:43024957-43024976 MsG0480020537.01.T01:intron 45.0%
GATGAGACATCACCTTAGGA+AGG + Chr4:43018632-43018651 None:intergenic 45.0%
GCACAGTTTGGAAGAGCTTT+AGG - Chr4:43024925-43024944 MsG0480020537.01.T01:intron 45.0%
GGCTTCCTCGTAAACAACTT+GGG + Chr4:43025013-43025032 None:intergenic 45.0%
GGGTGTTAGAATTGGAAGTC+AGG - Chr4:43024977-43024996 MsG0480020537.01.T01:intron 45.0%
GGTAGATGAGACATCACCTT+AGG + Chr4:43018636-43018655 None:intergenic 45.0%
GGTGAAGAGAATTGTTGACC+TGG + Chr4:43019996-43020015 None:intergenic 45.0%
GTAACTTCTAGCGACAGTGA+AGG - Chr4:43019054-43019073 MsG0480020537.01.T01:CDS 45.0%
GTCTTAACCCTCCTAATCTC+AGG - Chr4:43024070-43024089 MsG0480020537.01.T01:intron 45.0%
GTGAAGGTAGTTAGAGCAGT+TGG - Chr4:43022759-43022778 MsG0480020537.01.T01:intron 45.0%
GTGACGAAAGACATCAACGA+GGG - Chr4:43019010-43019029 MsG0480020537.01.T01:three_prime_UTR 45.0%
GTGTGACTCTGTTGTAGAAG+TGG - Chr4:43022859-43022878 MsG0480020537.01.T01:intron 45.0%
GTTGACCTGGGATTGTTGAA+GGG + Chr4:43019983-43020002 None:intergenic 45.0%
GTTGGTTGGAAGTCAATCCA+TGG - Chr4:43021135-43021154 MsG0480020537.01.T01:intron 45.0%
TCACTTCTCCTGAGATTAGG+AGG + Chr4:43024081-43024100 None:intergenic 45.0%
TCCAGCAGATACTAACTCCA+AGG + Chr4:43022447-43022466 None:intergenic 45.0%
TCCTTGGAGTTAGTATCTGC+TGG - Chr4:43022443-43022462 MsG0480020537.01.T01:intron 45.0%
TCGATCCCATTACTCGCATT+CGG - Chr4:43023465-43023484 MsG0480020537.01.T01:intron 45.0%
TCGCGCTGTAGATATAACCA+AGG - Chr4:43020760-43020779 MsG0480020537.01.T01:intron 45.0%
TCGGGGGAGTAATTGGATAT+CGG - Chr4:43023484-43023503 MsG0480020537.01.T01:intron 45.0%
TCGGTTTAGGTCCAAGTTTC+AGG - Chr4:43023503-43023522 MsG0480020537.01.T01:intron 45.0%
TGAAGCACAGACACATACAC+CGG - Chr4:43020189-43020208 MsG0480020537.01.T01:CDS 45.0%
TGAGACATCACCTTAGGAAG+GGG + Chr4:43018630-43018649 None:intergenic 45.0%
TGAGTGGAATGATAGAGGGT+AGG - Chr4:43024956-43024975 MsG0480020537.01.T01:intron 45.0%
TGGCTTCCTCGTAAACAACT+TGG + Chr4:43025014-43025033 None:intergenic 45.0%
TGTTGACCTGGGATTGTTGA+AGG + Chr4:43019984-43020003 None:intergenic 45.0%
TTCAACAGCTTCCTTGGTAC+AGG - Chr4:43023559-43023578 MsG0480020537.01.T01:intron 45.0%
TTCGAATCATTGCTTGCCCT+TGG + Chr4:43018734-43018753 None:intergenic 45.0%
TTGCGTGTCATCCTTGTGAA+GGG - Chr4:43022165-43022184 MsG0480020537.01.T01:intron 45.0%
! AACTGACCTGGTTTGCAGAA+TGG + Chr4:43020122-43020141 None:intergenic 45.0%
! AAGAAGATAGGGAGGTTGGT+TGG - Chr4:43021121-43021140 MsG0480020537.01.T01:intron 45.0%
! AGAGGGTAGGGTGTTAGAAT+TGG - Chr4:43024969-43024988 MsG0480020537.01.T01:intron 45.0%
! ATCAAATTCTTGTGGTGGGG+TGG - Chr4:43022699-43022718 MsG0480020537.01.T01:intron 45.0%
! CAGAAAAGTGCAGATCGAAG+GGG - Chr4:43022605-43022624 MsG0480020537.01.T01:CDS 45.0%
! CTTTCATTGGTCTGTTGGTG+TGG - Chr4:43021480-43021499 MsG0480020537.01.T01:intron 45.0%
! GCAGAAAAGTGCAGATCGAA+GGG - Chr4:43022604-43022623 MsG0480020537.01.T01:CDS 45.0%
! GCTTTAGGTGAAGAGATGAG+TGG - Chr4:43024940-43024959 MsG0480020537.01.T01:intron 45.0%
! GGTGGTAGGATTTTTGCGTA+AGG - Chr4:43021540-43021559 MsG0480020537.01.T01:intron 45.0%
! GGTTTTACGTGCCTAATTCG+AGG - Chr4:43022480-43022499 MsG0480020537.01.T01:intron 45.0%
! TAGGGTTTGGCTCCTAAGAA+GGG + Chr4:43018864-43018883 None:intergenic 45.0%
! TCAAATTCTTGTGGTGGGGT+GGG - Chr4:43022700-43022719 MsG0480020537.01.T01:intron 45.0%
! TGCAGAAAAGTGCAGATCGA+AGG - Chr4:43022603-43022622 MsG0480020537.01.T01:CDS 45.0%
!! AGAGGGTACCGATAAATGCT+AGG + Chr4:43023080-43023099 None:intergenic 45.0%
!! CATGGCCAATTTGCTGAGAA+TGG - Chr4:43023189-43023208 MsG0480020537.01.T01:CDS 45.0%
!! GAGAAGAGTGTTAGTCTAGC+TGG - Chr4:43023315-43023334 MsG0480020537.01.T01:CDS 45.0%
!! GCCAATTTGCTGAGAATGGA+TGG - Chr4:43023193-43023212 MsG0480020537.01.T01:CDS 45.0%
!! TTCCATTTTGGGGGTTCGTT+GGG - Chr4:43020609-43020628 MsG0480020537.01.T01:CDS 45.0%
!!! ACCGGATACGACACTGATTT+TGG - Chr4:43020207-43020226 MsG0480020537.01.T01:CDS 45.0%
!!! GGTTTTGGGCAAACCATCTT+TGG + Chr4:43019579-43019598 None:intergenic 45.0%
!!! TAATTTTTTTTTTTTTTTTG+TGG + Chr4:43019633-43019652 None:intergenic 5.0%
AACGGTGTTCTCCTGTACCA+AGG + Chr4:43023573-43023592 None:intergenic 50.0%
AAGGCAACACCCTGTCTAGT+AGG - Chr4:43021737-43021756 MsG0480020537.01.T01:intron 50.0%
ACACAGAAGAAACTCCGAGG+AGG - Chr4:43018599-43018618 MsG0480020537.01.T01:three_prime_UTR 50.0%
ACACAGTGCAGAGGTCAACA+AGG + Chr4:43024347-43024366 None:intergenic 50.0%
ACCATCTTTGGTCCCTGACA+CGG + Chr4:43019567-43019586 None:intergenic 50.0%
ACCCTCTATCCATACAGTCG+TGG - Chr4:43023093-43023112 MsG0480020537.01.T01:CDS 50.0%
AGAGGAAGTTGAGGCGAGAA+CGG - Chr4:43019135-43019154 MsG0480020537.01.T01:CDS 50.0%
AGTTCATTGGGCCTAACCCA+AGG - Chr4:43022507-43022526 MsG0480020537.01.T01:intron 50.0%
ATCCCATTACTCGCATTCGG+GGG - Chr4:43023468-43023487 MsG0480020537.01.T01:intron 50.0%
ATCTGCTGGAGTCGAGAACA+AGG - Chr4:43022457-43022476 MsG0480020537.01.T01:intron 50.0%
ATGTGTCACATGTCGGACAC+CGG - Chr4:43020268-43020287 MsG0480020537.01.T01:CDS 50.0%
CACCACGACTGTATGGATAG+AGG + Chr4:43023098-43023117 None:intergenic 50.0%
CATACCTCCACCACCATTCA+TGG + Chr4:43023785-43023804 None:intergenic 50.0%
CGATCCCATTACTCGCATTC+GGG - Chr4:43023466-43023485 MsG0480020537.01.T01:intron 50.0%
CGTACACCTGGTGTAATTGC+AGG + Chr4:43023638-43023657 None:intergenic 50.0%
CGTGACGAAAGACATCAACG+AGG - Chr4:43019009-43019028 MsG0480020537.01.T01:three_prime_UTR 50.0%
CTAGGCAACCAACCCTTCTT+AGG - Chr4:43018849-43018868 MsG0480020537.01.T01:three_prime_UTR 50.0%
CTCAGCAAATTGGCCATGGA+AGG + Chr4:43023187-43023206 None:intergenic 50.0%
CTCCCAACATTGGGATCCAA+CGG - Chr4:43022674-43022693 MsG0480020537.01.T01:intron 50.0%
CTCTATCCATACAGTCGTGG+TGG - Chr4:43023096-43023115 MsG0480020537.01.T01:CDS 50.0%
CTGTGGAAGACCATGAATGG+TGG - Chr4:43023772-43023791 MsG0480020537.01.T01:intron 50.0%
CTTCTTAGGAGCCAAACCCT+AGG - Chr4:43018863-43018882 MsG0480020537.01.T01:three_prime_UTR 50.0%
GAAGTGGAAACTCTTGGGGT+TGG - Chr4:43022875-43022894 MsG0480020537.01.T01:intron 50.0%
GAATTGGACTACACGTGCCT+TGG + Chr4:43022527-43022546 None:intergenic 50.0%
GACACACAGAAGAAACTCCG+AGG - Chr4:43018596-43018615 MsG0480020537.01.T01:three_prime_UTR 50.0%
GAGACATCACCTTAGGAAGG+GGG + Chr4:43018629-43018648 None:intergenic 50.0%
GATCCCATTACTCGCATTCG+GGG - Chr4:43023467-43023486 MsG0480020537.01.T01:intron 50.0%
GGAGAAGGAGAATGAGGTGA+TGG + Chr4:43019859-43019878 None:intergenic 50.0%
GGAGCTCTATGAACGAGACA+TGG - Chr4:43019075-43019094 MsG0480020537.01.T01:CDS 50.0%
GGCTCACTTCTCCTGAGATT+AGG + Chr4:43024084-43024103 None:intergenic 50.0%
GGGTTAGGCCCAATGAACTT+TGG + Chr4:43022506-43022525 None:intergenic 50.0%
GGTGATTAGACACACGATGG+AGG + Chr4:43025062-43025081 None:intergenic 50.0%
TAGGTCCCTTCAACAATCCC+AGG - Chr4:43019975-43019994 MsG0480020537.01.T01:CDS 50.0%
TCCCAACATTGGGATCCAAC+GGG - Chr4:43022675-43022694 MsG0480020537.01.T01:intron 50.0%
TCCCGTTGGATCCCAATGTT+GGG + Chr4:43022679-43022698 None:intergenic 50.0%
TCTGCTGGAGTCGAGAACAA+GGG - Chr4:43022458-43022477 MsG0480020537.01.T01:intron 50.0%
TCTTCCAAACTGTGCAGCCA+TGG + Chr4:43024920-43024939 None:intergenic 50.0%
TGCGTGTCATCCTTGTGAAG+GGG - Chr4:43022166-43022185 MsG0480020537.01.T01:intron 50.0%
TGGAAGACCATGAATGGTGG+TGG - Chr4:43023775-43023794 MsG0480020537.01.T01:intron 50.0%
TTCCCAACGAACCCCCAAAA+TGG + Chr4:43020614-43020633 None:intergenic 50.0%
TTCCCGTTGGATCCCAATGT+TGG + Chr4:43022680-43022699 None:intergenic 50.0%
! ACCAGGTGTACGCTAGTTTG+TGG - Chr4:43023646-43023665 MsG0480020537.01.T01:intron 50.0%
! AGTTTGATTCATGGTGGGGG+AGG - Chr4:43020647-43020666 MsG0480020537.01.T01:CDS 50.0%
! CAGGTGTACGCTAGTTTGTG+GGG - Chr4:43023648-43023667 MsG0480020537.01.T01:intron 50.0%
! CCAGGTGTACGCTAGTTTGT+GGG - Chr4:43023647-43023666 MsG0480020537.01.T01:intron 50.0%
! CTAGGGTTTGGCTCCTAAGA+AGG + Chr4:43018865-43018884 None:intergenic 50.0%
! GTTTGGCTCCTAAGAAGGGT+TGG + Chr4:43018860-43018879 None:intergenic 50.0%
! GTTTTTCTCACGCCCCTTCA+GGG + Chr4:43022234-43022253 None:intergenic 50.0%
! TCCAAGTTTCAGGTCCCCTT+GGG - Chr4:43023513-43023532 MsG0480020537.01.T01:intron 50.0%
! TGTTTTTCTCACGCCCCTTC+AGG + Chr4:43022235-43022254 None:intergenic 50.0%
! TTGGTTGGTTAGTCGGTCAG+AGG - Chr4:43022320-43022339 MsG0480020537.01.T01:intron 50.0%
!! AAGACCATGAATGGTGGTGG+AGG - Chr4:43023778-43023797 MsG0480020537.01.T01:intron 50.0%
!! CTAGACAGGGTGTTGCCTTA+TGG + Chr4:43021736-43021755 None:intergenic 50.0%
!! CTTCCATTTTGGGGGTTCGT+TGG - Chr4:43020608-43020627 MsG0480020537.01.T01:CDS 50.0%
AATAAGGACGAGTGCGGAGG+AGG + Chr4:43021174-43021193 None:intergenic 55.0%
ACCCAAGGGGACCTGAAACT+TGG + Chr4:43023517-43023536 None:intergenic 55.0%
ACCGTGTCAGGGACCAAAGA+TGG - Chr4:43019563-43019582 MsG0480020537.01.T01:intron 55.0%
ACGTTCCCACTGTGCAAAGC+TGG + Chr4:43018992-43019011 None:intergenic 55.0%
ACTCCCCCGAATGCGAGTAA+TGG + Chr4:43023474-43023493 None:intergenic 55.0%
AGTGTCGCAGCCAAAATGCC+AGG + Chr4:43023693-43023712 None:intergenic 55.0%
ATGGCACCAGCTTTGCACAG+TGG - Chr4:43018983-43019002 MsG0480020537.01.T01:three_prime_UTR 55.0%
CCCACAAACTAGCGTACACC+TGG + Chr4:43023650-43023669 None:intergenic 55.0%
CTCCCCCGAATGCGAGTAAT+GGG + Chr4:43023473-43023492 None:intergenic 55.0%
CTCCTCTGTGTTTGGGCCAA+GGG - Chr4:43018715-43018734 MsG0480020537.01.T01:three_prime_UTR 55.0%
CTCGCATTCGGGGGAGTAAT+TGG - Chr4:43023477-43023496 MsG0480020537.01.T01:intron 55.0%
CTGCTGGAGTCGAGAACAAG+GGG - Chr4:43022459-43022478 MsG0480020537.01.T01:intron 55.0%
GACTACACGTGCCTTGGGTT+AGG + Chr4:43022521-43022540 None:intergenic 55.0%
GAGAGTCCACCACGACTGTA+TGG + Chr4:43023105-43023124 None:intergenic 55.0%
GGGTGGTCGTGGTGTTTGTT+AGG - Chr4:43022726-43022745 MsG0480020537.01.T01:intron 55.0%
GTCACAGCTGGACTCCCATT+GGG - Chr4:43023405-43023424 MsG0480020537.01.T01:intron 55.0%
GTGTGCAGATCTGTGCTGTG+TGG - Chr4:43024511-43024530 MsG0480020537.01.T01:intron 55.0%
TGCAGATCTGTGCTGTGTGG+TGG - Chr4:43024514-43024533 MsG0480020537.01.T01:intron 55.0%
TGGCACCAGCTTTGCACAGT+GGG - Chr4:43018984-43019003 MsG0480020537.01.T01:three_prime_UTR 55.0%
! AATTCTTGTGGTGGGGTGGG+TGG - Chr4:43022703-43022722 MsG0480020537.01.T01:intron 55.0%
! ATTCTTGTGGTGGGGTGGGT+GGG - Chr4:43022704-43022723 MsG0480020537.01.T01:intron 55.0%
! GTCCAAGTTTCAGGTCCCCT+TGG - Chr4:43023512-43023531 MsG0480020537.01.T01:intron 55.0%
!! GTCGTGGTGGACTCTCAAGT+TGG - Chr4:43023109-43023128 MsG0480020537.01.T01:CDS 55.0%
ACTCGCGCCTCCTCTGTGTT+TGG - Chr4:43018707-43018726 MsG0480020537.01.T01:three_prime_UTR 60.0%
CCTCCTCTGTGTTTGGGCCA+AGG - Chr4:43018714-43018733 MsG0480020537.01.T01:three_prime_UTR 60.0%
CCTTGGCCCAAACACAGAGG+AGG + Chr4:43018717-43018736 None:intergenic 60.0%
CTCGCGCCTCCTCTGTGTTT+GGG - Chr4:43018708-43018727 MsG0480020537.01.T01:three_prime_UTR 60.0%
GGAAGTTGAGGCGAGAACGG+AGG - Chr4:43019138-43019157 MsG0480020537.01.T01:CDS 60.0%
GGTCACAGCTGGACTCCCAT+TGG - Chr4:43023404-43023423 MsG0480020537.01.T01:intron 60.0%
TGCCCTTGGCCCAAACACAG+AGG + Chr4:43018720-43018739 None:intergenic 60.0%
! TTCTTGTGGTGGGGTGGGTG+GGG - Chr4:43022705-43022724 MsG0480020537.01.T01:intron 60.0%
AGGAAGGGGGCTGACCTCCT+CGG + Chr4:43018616-43018635 None:intergenic 65.0%
GGAGGTCAGCCCCCTTCCTA+AGG - Chr4:43018617-43018636 MsG0480020537.01.T01:three_prime_UTR 65.0%
! TCTTGTGGTGGGGTGGGTGG+GGG - Chr4:43022706-43022725 MsG0480020537.01.T01:intron 65.0%
! TGTGGTGGGGTGGGTGGGGG+TGG - Chr4:43022709-43022728 MsG0480020537.01.T01:intron 75.0%
! GGGGTGGGTGGGGGTGGTCG+TGG - Chr4:43022715-43022734 MsG0480020537.01.T01:intron 80.0%
Chromosome Type Strat End Strand Name
Chr4 gene 43018584 43025188 43018584 ID=MsG0480020537.01;Name=MsG0480020537.01
Chr4 mRNA 43018584 43025188 43018584 ID=MsG0480020537.01.T01;Parent=MsG0480020537.01;Name=MsG0480020537.01.T01;_AED=0.35;_eAED=0.35;_QI=0|0.6|0.66|0.83|1|1|6|453|484
Chr4 exon 43018584 43019253 43018584 ID=MsG0480020537.01.T01:exon:5170;Parent=MsG0480020537.01.T01
Chr4 exon 43019973 43020457 43019973 ID=MsG0480020537.01.T01:exon:5169;Parent=MsG0480020537.01.T01
Chr4 exon 43020557 43020713 43020557 ID=MsG0480020537.01.T01:exon:5168;Parent=MsG0480020537.01.T01
Chr4 exon 43022540 43022668 43022540 ID=MsG0480020537.01.T01:exon:5167;Parent=MsG0480020537.01.T01
Chr4 exon 43022932 43023361 43022932 ID=MsG0480020537.01.T01:exon:5166;Parent=MsG0480020537.01.T01
Chr4 exon 43025152 43025188 43025152 ID=MsG0480020537.01.T01:exon:5165;Parent=MsG0480020537.01.T01
Chr4 CDS 43025152 43025188 43025152 ID=MsG0480020537.01.T01:cds;Parent=MsG0480020537.01.T01
Chr4 CDS 43022932 43023361 43022932 ID=MsG0480020537.01.T01:cds;Parent=MsG0480020537.01.T01
Chr4 CDS 43022540 43022668 43022540 ID=MsG0480020537.01.T01:cds;Parent=MsG0480020537.01.T01
Chr4 CDS 43020557 43020713 43020557 ID=MsG0480020537.01.T01:cds;Parent=MsG0480020537.01.T01
Chr4 CDS 43019973 43020457 43019973 ID=MsG0480020537.01.T01:cds;Parent=MsG0480020537.01.T01
Chr4 CDS 43019037 43019253 43019037 ID=MsG0480020537.01.T01:cds;Parent=MsG0480020537.01.T01
Chr4 three_prime_UTR 43018584 43019036 43018584 ID=MsG0480020537.01.T01:three_prime_utr;Parent=MsG0480020537.01.T01
Gene Sequence

>MsG0480020537.01.T01

ATGTTTAAACTCGACACACAGAAGAAACTCCGAGGAGACCCAATAGTGAAAAAGATAGAATCTCTTGGAGAAGTTCTCAATGGTGATCGTTTGAGCAATGGTTTGTATGAGTTCAAATTCAGGGAAGATAAGATTGATGAAACATTGTGTCAAAAGAAGCTTACAATTGATGAAATTGGTATCTTGAAGGAAGCTATAAACGATGAATTTTACTTTCAGTTTTATCTTGACGATCTTCCATTTTGGGGGTTCGTTGGGAAAGTTGAAGATGAAAGTTTGATTCATGGTGGGGGAGGATCAAGTTATTACCTTTTTACACATGTTCAGTTTGATGTTCTTTACAACGGGAATCAAGTCGTAGAAGTGAAAGCATTTGGTGATCCAAATCGCGCTGTAGATATAACCAAGGATGTTGGTATTGATGTTAAATTCACTTATTCGGTTATCTGGAATGCCACTGAATTACGGTATTCTAGCGCAAATGAAGAAGATAGGGAGGTTGGTTGGAAGTCAATCCATGGTGATGTATTCAAGCCTCCTCCGCACTCGTCCTTATTTTTTGCTGTTGTGGGAATGGGTACCCAACTGCTAATCTTGCTTTGTGTCCTTCTGTTCCTAGCATTTATCGGTACCCTCTATCCATACAGTCGTGGTGGACTCTCAAGTTGGCTTGTCCTTCTATTCACTCTTTCATCTGTTTTTGCTGGGTACTTAACTGCATCCTTCCATGGCCAATTTGCTGAGAATGGATGGGAGAAGAGTGTTAGTCTAGCTGGGATTCTTTACATTGGTCCGGTGTTTGTTGCATTCTCTATCCTCAACATTATTGCAATATCTTACAGGGTCACAGCTGGACTCCCATTGGGCTCTATTATTGTGATTCTTAGTTTATTTGGATTTGTATCGATCCCATTACTCGCATTCGGGGGAGTAATTGGATATCGGTTTAGGTCCAAGTTTCAGGTCCCCTTGGGTACAAAGAGATATCCGAAAGAGATTCAACAGCTTCCTTGGTACAGGAGAACACCGTTTCAAATGTTTATTGGAGGTTTTGTTCCTTTTAGTGCAATTGTCCTGCAATTACACCAGGTGTACGCTAGTTTGTGGGGCTACAAAATATACACTCTTCCTGGCATTTTGGCTGCGACACTCATCACCGTCATTGTGATTGTTGCGCTCGTAAATATTGGCTTGACATATGTTCAACTATCTGTGGAAGACCATGAATGGTGGTGGAGATCTGTGCTGTGTGGTGGTTCAACAGCCATTTTCATGTTCGGTTATGGTATCTACTTCTATGCAAGATCAAGAATGAGTGGATTCTTACAGCTATCCTTCTTTATTGGCTACAATGCGTGCATATGCTATGCTTTCTTCCTGATATTTGGTGCCATCAGTTTCCGAGTTTCTTTGCTATTTGTTCGCCGTATATACCATAATGTCAAAAGAGAGTGA
Protein sequence

>MsG0480020537.01.T01

MFKLDTQKKLRGDPIVKKIESLGEVLNGDRLSNGLYEFKFREDKIDETLCQKKLTIDEIGILKEAINDEFYFQFYLDDLPFWGFVGKVEDESLIHGGGGSSYYLFTHVQFDVLYNGNQVVEVKAFGDPNRAVDITKDVGIDVKFTYSVIWNATELRYSSANEEDREVGWKSIHGDVFKPPPHSSLFFAVVGMGTQLLILLCVLLFLAFIGTLYPYSRGGLSSWLVLLFTLSSVFAGYLTASFHGQFAENGWEKSVSLAGILYIGPVFVAFSILNIIAISYRVTAGLPLGSIIVILSLFGFVSIPLLAFGGVIGYRFRSKFQVPLGTKRYPKEIQQLPWYRRTPFQMFIGGFVPFSAIVLQLHQVYASLWGYKIYTLPGILAATLITVIVIVALVNIGLTYVQLSVEDHEWWWRSVLCGGSTAIFMFGYGIYFYARSRMSGFLQLSFFIGYNACICYAFFLIFGAISFRVSLLFVRRIYHNVKRE*