AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180000583.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180000583.01.T01 MTR_1g012920 98.889 360 4 0 1 360 1 360 0.0 742
MsG0180000583.01.T01 MTR_5g089520 61.219 361 125 4 1 360 1 347 1.64e-162 459
MsG0180000583.01.T01 MTR_8g039290 62.842 366 123 5 1 360 1 359 1.10e-160 454
MsG0180000583.01.T01 MTR_8g039290 62.568 366 123 6 1 360 1 358 3.07e-158 448
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180000583.01.T01 AT5G25265 81.421 366 62 3 1 360 1 366 0.0 602
MsG0180000583.01.T01 AT2G25260 72.702 359 91 5 4 360 5 358 0.0 530
MsG0180000583.01.T01 AT5G13500 71.924 317 85 3 46 360 43 357 2.67e-172 484
MsG0180000583.01.T01 AT5G13500 71.924 317 85 3 46 360 43 357 2.67e-172 484
MsG0180000583.01.T01 AT5G13500 71.924 317 85 3 46 360 43 357 2.67e-172 484
MsG0180000583.01.T01 AT3G01720 24.150 294 186 10 65 341 394 667 1.69e-12 69.3

Find 109 sgRNAs with CRISPR-Local

Find 359 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAAAAGCTTTATCGGTTTC+AGG 0.147915 1:-8155840 None:intergenic
TTCATAATTCACTACACTTA+TGG 0.167165 1:+8157328 MsG0180000583.01.T01:CDS
ATGAAACATACCACACTTTC+TGG 0.188552 1:-8157570 None:intergenic
CTAGGTGACTCTAGTGAAAA+TGG 0.224137 1:+8158682 MsG0180000583.01.T01:intron
GTTGCTCAACCTTTGCCTTC+TGG 0.227974 1:+8154170 MsG0180000583.01.T01:CDS
GCCGTTTCGTCTGCTCTTCA+TGG 0.235074 1:+8155975 MsG0180000583.01.T01:CDS
GACGAGTTTACGTTCAAATT+TGG 0.238984 1:+8158976 MsG0180000583.01.T01:three_prime_UTR
CCTGAAACCGATAAAGCTTT+TGG 0.263522 1:+8155840 MsG0180000583.01.T01:CDS
CACCCATCCAAAAGCTTTAT+CGG 0.266241 1:-8155847 None:intergenic
GAAGAAGTTGGTGAATTATT+AGG 0.281680 1:-8153721 None:intergenic
AAAATTTCAATATGGTGTTT+TGG 0.283080 1:-8158919 None:intergenic
ATTGGATCTATATTGGTTAC+AGG 0.301550 1:-8155497 None:intergenic
TTAAGTGGCATCTTGATTAC+TGG 0.305393 1:-8153942 None:intergenic
ACACAAGGACTTCATGATTC+AGG 0.308069 1:+8156013 MsG0180000583.01.T01:CDS
ATTCCCAATTGGATCTATAT+TGG 0.312594 1:-8155504 None:intergenic
TGTTGGAGCAATCTTCTTAA+GGG 0.314451 1:-8155784 None:intergenic
AGTGTAGAGTTATGTATTAT+TGG 0.315997 1:+8154039 MsG0180000583.01.T01:CDS
TATTCCAAACTGGTCATCAT+AGG 0.322270 1:+8158724 MsG0180000583.01.T01:CDS
ATGTTACTGAGAATGTTATT+AGG 0.323674 1:-8153830 None:intergenic
AGCACTTTCTCATATTTCTT+AGG 0.325931 1:-8155446 None:intergenic
TTATAATGATTGTTGTAGTT+AGG 0.334802 1:+8158951 MsG0180000583.01.T01:three_prime_UTR
TGGTAAAACTGATCAGTATA+TGG 0.343547 1:+8154130 MsG0180000583.01.T01:CDS
TCATAATTCACTACACTTAT+GGG 0.346462 1:+8157329 MsG0180000583.01.T01:CDS
TATAATGATTGTTGTAGTTA+GGG 0.356058 1:+8158952 MsG0180000583.01.T01:three_prime_UTR
ATAATAGATCGGTACCTTCA+TGG 0.360692 1:-8157362 None:intergenic
ATGTTGGAGCAATCTTCTTA+AGG 0.368822 1:-8155785 None:intergenic
GATACCTTGCCAACAATTAC+AGG 0.376521 1:-8155530 None:intergenic
CATTCCATCTCTGGCTAAGT+TGG 0.377427 1:-8155393 None:intergenic
CTGGTATGGGTGGATTTACT+AGG 0.390112 1:+8154096 MsG0180000583.01.T01:CDS
GAAAGTGGTGATGACAATTC+TGG 0.391728 1:+8154077 MsG0180000583.01.T01:CDS
CTGATTCTGTTTACAATACA+TGG 0.406387 1:+8154015 MsG0180000583.01.T01:CDS
AAGCCCTATGATGACCAGTT+TGG 0.412238 1:-8158728 None:intergenic
TTTGCCTTCTGGAATGGATC+AGG 0.414709 1:+8154181 MsG0180000583.01.T01:CDS
GGGAATTCACCTGTAATTGT+TGG 0.416734 1:+8155521 MsG0180000583.01.T01:CDS
TGCAGCTCCCATTCCATCTC+TGG 0.432516 1:-8155402 None:intergenic
TCAACCTTTGCCTTCTGGAA+TGG 0.434673 1:+8154175 MsG0180000583.01.T01:CDS
TCTCTGGCTAAGTTGGGTAT+AGG 0.438539 1:-8155386 None:intergenic
GTAACCAATATAGATCCAAT+TGG 0.439770 1:+8155500 MsG0180000583.01.T01:CDS
GTTACAGGTCCATTCTCCTC+GGG 0.450284 1:-8155482 None:intergenic
TCGTCTGCTCTTCATGGTGT+TGG 0.457117 1:+8155981 MsG0180000583.01.T01:CDS
ATTCCATCTCTGGCTAAGTT+GGG 0.459075 1:-8155392 None:intergenic
ATTACAGGTGAATTCCCAAT+TGG 0.460766 1:-8155515 None:intergenic
AACATGGATGAATGTTTCCT+TGG 0.468333 1:+8155803 MsG0180000583.01.T01:CDS
TTAGGCTCGATATAAAAGAA+AGG 0.471498 1:-8155428 None:intergenic
CCACCATGGGACAAAGAACT+TGG 0.473823 1:+8157298 MsG0180000583.01.T01:CDS
AATCAGGGTGAACTGACATA+TGG 0.476030 1:+8157465 MsG0180000583.01.T01:intron
AAAGGTTGAGCAACAAAAGT+AGG 0.477238 1:-8154161 None:intergenic
TGTTTCCTTGGCAATGAAGA+AGG 0.478316 1:+8155815 MsG0180000583.01.T01:CDS
TTGCCAAGTTCTTTGTCCCA+TGG 0.483106 1:-8157301 None:intergenic
GGTTTCACAATGATATGATC+TGG 0.489542 1:-8155365 None:intergenic
AAGTACTACCCCGAGGAGAA+TGG 0.491483 1:+8155473 MsG0180000583.01.T01:CDS
CCGCAGCAAATATTCCAAAC+TGG 0.497250 1:+8158714 MsG0180000583.01.T01:CDS
CAACTTAGCCAGAGATGGAA+TGG 0.497539 1:+8155394 MsG0180000583.01.T01:CDS
TAACCAATATAGATCCAATT+GGG 0.497652 1:+8155501 MsG0180000583.01.T01:CDS
TACGTTCAAATTTGGTACCT+CGG 0.504706 1:+8158984 MsG0180000583.01.T01:three_prime_UTR
ACATACAACATCATTATCTC+AGG 0.505441 1:+8153858 MsG0180000583.01.T01:CDS
GGTTACAGGTCCATTCTCCT+CGG 0.510880 1:-8155483 None:intergenic
TGGTGATGACAATTCTGGTA+TGG 0.520121 1:+8154082 MsG0180000583.01.T01:CDS
AACTTAGCCAGAGATGGAAT+GGG 0.520799 1:+8155395 MsG0180000583.01.T01:CDS
GTCATCATAGGGCTTTCTAC+AGG 0.521846 1:+8158736 MsG0180000583.01.T01:exon
TTCACCTGTAATTGTTGGCA+AGG 0.523630 1:+8155526 MsG0180000583.01.T01:CDS
TAGGCTCGATATAAAAGAAA+GGG 0.524947 1:-8155427 None:intergenic
TTATTAGGCGGCTATATGAA+AGG 0.527083 1:-8153706 None:intergenic
TATTAGGCGGCTATATGAAA+GGG 0.529546 1:-8153705 None:intergenic
CATTGTTCTTAATAGACCAT+GGG 0.529987 1:+8155196 MsG0180000583.01.T01:CDS
TTTATTGATGGTTTACGTGA+AGG 0.530199 1:-8153912 None:intergenic
GCGTGCCATTTGTCACAGAT+TGG 0.533569 1:+8158789 MsG0180000583.01.T01:three_prime_UTR
CCAGGAAAATCTTGTCTCAA+AGG 0.533851 1:-8153888 None:intergenic
ACCATGAAGAGCAGACGAAA+CGG 0.535360 1:-8155976 None:intergenic
TAAGTGGCATCTTGATTACT+GGG 0.536185 1:-8153941 None:intergenic
AGGATCCTTCTTCATTGCCA+AGG 0.541651 1:-8155820 None:intergenic
TGGTTCTGTCTATATCTCGT+TGG 0.546182 1:-8153681 None:intergenic
TTTAAGAAGATGAAGGAAAG+TGG 0.546825 1:+8154062 MsG0180000583.01.T01:CDS
ATTATGTATGTCAGCCACCA+TGG 0.547374 1:+8157284 MsG0180000583.01.T01:intron
ATTCCAAACTGGTCATCATA+GGG 0.548896 1:+8158725 MsG0180000583.01.T01:CDS
ACATTGTTCTTAATAGACCA+TGG 0.549000 1:+8155195 MsG0180000583.01.T01:CDS
CCAAGTTCTTTGTCCCATGG+TGG 0.557973 1:-8157298 None:intergenic
AATCTGACATTGCCACCACC+TGG 0.559929 1:+8157543 MsG0180000583.01.T01:CDS
AAGGAAACATTCATCCATGT+TGG 0.564015 1:-8155801 None:intergenic
TTACAGTGTGATCAGAATGC+AGG 0.564930 1:+8158762 MsG0180000583.01.T01:three_prime_UTR
AAGGTTGAGCAACAAAAGTA+GGG 0.572523 1:-8154160 None:intergenic
TTATTGGTTTAAGAAGATGA+AGG 0.575689 1:+8154055 MsG0180000583.01.T01:CDS
ATACCCAACTTAGCCAGAGA+TGG 0.578267 1:+8155389 MsG0180000583.01.T01:CDS
TGATGCCAATCTGTGACAAA+TGG 0.578611 1:-8158794 None:intergenic
ATCATAGGGCTTTCTACAGG+TGG 0.580592 1:+8158739 MsG0180000583.01.T01:exon
TTATGTATGTCAGCCACCAT+GGG 0.581129 1:+8157285 MsG0180000583.01.T01:intron
GATGGTTTACGTGAAGGACC+AGG 0.582960 1:-8153906 None:intergenic
TACAGTGTGATCAGAATGCA+GGG 0.583449 1:+8158763 MsG0180000583.01.T01:three_prime_UTR
ACCACACTTTCTGGAACACC+AGG 0.589263 1:-8157561 None:intergenic
AGGCGGCTATATGAAAGGGT+TGG 0.596018 1:-8153701 None:intergenic
TTAAGAAGATTGCTCCAACA+TGG 0.603507 1:+8155787 MsG0180000583.01.T01:CDS
CTTTCTGGAACACCAGGTGG+TGG 0.609144 1:-8157555 None:intergenic
GGTGATGACAATTCTGGTAT+GGG 0.617478 1:+8154083 MsG0180000583.01.T01:CDS
GACCATGGGCATTTGTACAG+TGG 0.619885 1:+8155210 MsG0180000583.01.T01:CDS
ACCTGGTGTTCCAGAAAGTG+TGG 0.626276 1:+8157560 MsG0180000583.01.T01:CDS
TGATCCATTCCAGAAGGCAA+AGG 0.638296 1:-8154179 None:intergenic
AGCCACTGTACAAATGCCCA+TGG 0.640117 1:-8155212 None:intergenic
GATGACAATTCTGGTATGGG+TGG 0.644898 1:+8154086 MsG0180000583.01.T01:CDS
GAAGTTGGTGAATTATTAGG+CGG 0.651672 1:-8153718 None:intergenic
TGTAGATGACTTTACACCTG+AGG 0.656696 1:+8158844 MsG0180000583.01.T01:three_prime_UTR
CCAGTTTGGAATATTTGCTG+CGG 0.657015 1:-8158714 None:intergenic
TGGGTGTGACTATTCCATGA+AGG 0.657511 1:+8157348 MsG0180000583.01.T01:CDS
AGAACCTGATCCATTCCAGA+AGG 0.663960 1:-8154185 None:intergenic
TTACAGGTCCATTCTCCTCG+GGG 0.680836 1:-8155481 None:intergenic
TGTTGGTAACATATTACACA+AGG 0.688104 1:+8155998 MsG0180000583.01.T01:CDS
TTGTATGAAATAAGTTACCG+AGG 0.692022 1:-8159001 None:intergenic
ACACTTTCTGGAACACCAGG+TGG 0.696694 1:-8157558 None:intergenic
ACATAAGAATTACAGATACA+CGG 0.703455 1:-8158824 None:intergenic
GCTAAGAAAGTACTACCCCG+AGG 0.782953 1:+8155466 MsG0180000583.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAAGAATTTAATAATAGAT+CGG - Chr1:8157376-8157395 None:intergenic 10.0%
!! AAAGTTAAAAAAATGTATTG+GGG + Chr1:8157867-8157886 MsG0180000583.01.T01:intron 15.0%
!! AACAAAACAAATTTCAAAAA+TGG + Chr1:8153782-8153801 MsG0180000583.01.T01:exon 15.0%
!! ACAAAACAAATTTCAAAAAT+GGG + Chr1:8153783-8153802 MsG0180000583.01.T01:exon 15.0%
!! GAAAGTTAAAAAAATGTATT+GGG + Chr1:8157866-8157885 MsG0180000583.01.T01:intron 15.0%
!! TCAAAAAAGAAAAAACAAAA+AGG + Chr1:8158051-8158070 MsG0180000583.01.T01:intron 15.0%
!! TGAAAGTTAAAAAAATGTAT+TGG + Chr1:8157865-8157884 MsG0180000583.01.T01:intron 15.0%
!!! AATTTCAAAAGTTATTTTGA+AGG + Chr1:8155059-8155078 MsG0180000583.01.T01:intron 15.0%
!!! ATGATGTATTCATTTTTTTT+TGG + Chr1:8157105-8157124 MsG0180000583.01.T01:intron 15.0%
!!! ATGATTTGTTTATAAACAAT+CGG - Chr1:8158365-8158384 None:intergenic 15.0%
!!! CTGTAATTTGTAATTTTTTT+TGG + Chr1:8154735-8154754 MsG0180000583.01.T01:intron 15.0%
!!! TAAATTTCATTTTCTATTCT+AGG + Chr1:8155277-8155296 MsG0180000583.01.T01:intron 15.0%
!!! TTATGTCTAATTTTACAATT+TGG + Chr1:8158480-8158499 MsG0180000583.01.T01:intron 15.0%
!!! TTTAATTTTGCAAAAATGAT+AGG + Chr1:8155758-8155777 MsG0180000583.01.T01:intron 15.0%
!!! TTTTTTCTTTTTTGAAAACT+TGG - Chr1:8158046-8158065 None:intergenic 15.0%
!! AAACAAATCTAACACTTTAA+AGG + Chr1:8156505-8156524 MsG0180000583.01.T01:intron 20.0%
!! ATAGTCTGATTTCAATAAAA+TGG + Chr1:8154849-8154868 MsG0180000583.01.T01:intron 20.0%
!! ATTTATGTAAAATTATGCTG+CGG - Chr1:8158548-8158567 None:intergenic 20.0%
!! GCAATGAAGAATTATATTTA+AGG + Chr1:8156172-8156191 MsG0180000583.01.T01:intron 20.0%
!! GTACTAAAAATCACTTATAT+GGG + Chr1:8157193-8157212 MsG0180000583.01.T01:intron 20.0%
!! TATAATGATTGTTGTAGTTA+GGG + Chr1:8158952-8158971 MsG0180000583.01.T01:three_prime_UTR 20.0%
!! TATTAATGTATGTTCCTTTA+TGG + Chr1:8155165-8155184 MsG0180000583.01.T01:intron 20.0%
!! TCATAGAAAAGTTAAAAGAA+AGG + Chr1:8156754-8156773 MsG0180000583.01.T01:intron 20.0%
!! TGTACTAAAAATCACTTATA+TGG + Chr1:8157192-8157211 MsG0180000583.01.T01:intron 20.0%
!! TTATAATGATTGTTGTAGTT+AGG + Chr1:8158951-8158970 MsG0180000583.01.T01:three_prime_UTR 20.0%
!!! AAAATTTCAATATGGTGTTT+TGG - Chr1:8158922-8158941 None:intergenic 20.0%
!!! AATATCCAGATATTTTGTAT+GGG - Chr1:8156823-8156842 None:intergenic 20.0%
!!! ATAGTACTATACTTGATTTT+GGG + Chr1:8154447-8154466 MsG0180000583.01.T01:intron 20.0%
!!! ATTATTTGTTTTTCCTGAAT+AGG + Chr1:8158323-8158342 MsG0180000583.01.T01:intron 20.0%
!!! ATTCTGAAACTAAAAATTCT+TGG + Chr1:8154962-8154981 MsG0180000583.01.T01:intron 20.0%
!!! ATTTAACTCAATCAGTTTTA+AGG + Chr1:8157704-8157723 MsG0180000583.01.T01:intron 20.0%
!!! ATTTTATTGAAATCAGACTA+TGG - Chr1:8154850-8154869 None:intergenic 20.0%
!!! GTTGATTTGTATAAATGATT+GGG + Chr1:8154260-8154279 MsG0180000583.01.T01:intron 20.0%
!!! TAATATCCAGATATTTTGTA+TGG - Chr1:8156824-8156843 None:intergenic 20.0%
!!! TATAGTACTATACTTGATTT+TGG + Chr1:8154446-8154465 MsG0180000583.01.T01:intron 20.0%
!!! TCTTCTTTTTTTGAATGTTT+GGG + Chr1:8158609-8158628 MsG0180000583.01.T01:intron 20.0%
!!! TGTTGATTTGTATAAATGAT+TGG + Chr1:8154259-8154278 MsG0180000583.01.T01:intron 20.0%
!!! TTTCTGGTAATTATGATTTA+TGG + Chr1:8155566-8155585 MsG0180000583.01.T01:intron 20.0%
! AAAAAATGAGTCATGCTATA+TGG + Chr1:8156420-8156439 MsG0180000583.01.T01:intron 25.0%
! AAAGAAAAAACAAAAAGGTG+AGG + Chr1:8158056-8158075 MsG0180000583.01.T01:intron 25.0%
! AAGAAAAAACAAAAAGGTGA+GGG + Chr1:8158057-8158076 MsG0180000583.01.T01:intron 25.0%
! AAGAGATATGTAGAAATCAA+TGG - Chr1:8156127-8156146 None:intergenic 25.0%
! AAGCAAATGAGAATTAAACA+TGG - Chr1:8157158-8157177 None:intergenic 25.0%
! ACATAAGAATTACAGATACA+CGG - Chr1:8158827-8158846 None:intergenic 25.0%
! ACGATATGATTTGATAAGAT+TGG - Chr1:8156884-8156903 None:intergenic 25.0%
! ACTTGATATACTAACACTTA+AGG - Chr1:8156303-8156322 None:intergenic 25.0%
! AGCAAATGAGAATTAAACAT+GGG - Chr1:8157157-8157176 None:intergenic 25.0%
! AGTGTAGAGTTATGTATTAT+TGG + Chr1:8154039-8154058 MsG0180000583.01.T01:CDS 25.0%
! ATAAAATGGCCTAATATTCT+TGG + Chr1:8154863-8154882 MsG0180000583.01.T01:intron 25.0%
! ATGTTACTGAGAATGTTATT+AGG - Chr1:8153833-8153852 None:intergenic 25.0%
! ATTAGATGACCTTAAAATCA+AGG - Chr1:8158289-8158308 None:intergenic 25.0%
! GTGTGTGAATTAAATACTTA+TGG + Chr1:8155706-8155725 MsG0180000583.01.T01:intron 25.0%
! TAACCAATATAGATCCAATT+GGG + Chr1:8155501-8155520 MsG0180000583.01.T01:CDS 25.0%
! TATTTCCCATACAAAATATC+TGG + Chr1:8156815-8156834 MsG0180000583.01.T01:intron 25.0%
! TCATAATTCACTACACTTAT+GGG + Chr1:8157329-8157348 MsG0180000583.01.T01:CDS 25.0%
! TTAAAAAAATGTATTGGGGT+GGG + Chr1:8157871-8157890 MsG0180000583.01.T01:intron 25.0%
! TTAATGAACTCTTCTAAACA+AGG - Chr1:8156349-8156368 None:intergenic 25.0%
! TTAGATGACCTTAAAATCAA+GGG - Chr1:8158288-8158307 None:intergenic 25.0%
! TTCATAATTCACTACACTTA+TGG + Chr1:8157328-8157347 MsG0180000583.01.T01:CDS 25.0%
! TTGAAATCACTACTGTTATT+TGG + Chr1:8154652-8154671 MsG0180000583.01.T01:intron 25.0%
! TTTGAAGGTTCATTAATTCT+GGG + Chr1:8155074-8155093 MsG0180000583.01.T01:intron 25.0%
!! ACAGTGTAGAACTTTTTATA+CGG - Chr1:8155619-8155638 None:intergenic 25.0%
!! ATAAAAATCAAGTTGTTGTG+AGG - Chr1:8155922-8155941 None:intergenic 25.0%
!! ATTAATTTGAGAAATGCTAG+TGG + Chr1:8154333-8154352 MsG0180000583.01.T01:intron 25.0%
!! ATTTGAAATCCTTGACTAAA+TGG - Chr1:8156268-8156287 None:intergenic 25.0%
!! CTATTTTGTATTGTTGATAC+AGG + Chr1:8155943-8155962 MsG0180000583.01.T01:intron 25.0%
!! TAGTACTATACTTGATTTTG+GGG + Chr1:8154448-8154467 MsG0180000583.01.T01:intron 25.0%
!! TTTTAGTACAATGTTGGAAA+TGG - Chr1:8157182-8157201 None:intergenic 25.0%
!!! AAAGATGGTATTTTTGTGTT+TGG + Chr1:8154471-8154490 MsG0180000583.01.T01:intron 25.0%
!!! ACATGAATTTTTTCAATGCT+TGG + Chr1:8158870-8158889 MsG0180000583.01.T01:three_prime_UTR 25.0%
!!! AGTGATTTTTAGTACAATGT+TGG - Chr1:8157188-8157207 None:intergenic 25.0%
!!! CATTTTCTATTCTAGGATTT+TGG + Chr1:8155284-8155303 MsG0180000583.01.T01:intron 25.0%
!!! CTCTTCTTTTTTTGAATGTT+TGG + Chr1:8158608-8158627 MsG0180000583.01.T01:intron 25.0%
!!! TCTTCTTGTTTTGAATGTTT+GGG + Chr1:8158440-8158459 MsG0180000583.01.T01:intron 25.0%
!!! TTATTGGTTTAAGAAGATGA+AGG + Chr1:8154055-8154074 MsG0180000583.01.T01:CDS 25.0%
!!! TTTATTCTCTGAAATTTGTG+TGG + Chr1:8155012-8155031 MsG0180000583.01.T01:intron 25.0%
!!! TTTTGAAGGTTCATTAATTC+TGG + Chr1:8155073-8155092 MsG0180000583.01.T01:intron 25.0%
!!! TTTTTTGAAAACTTGGTATC+CGG - Chr1:8158039-8158058 None:intergenic 25.0%
AAAAAATTCATGTTTGCCTC+AGG - Chr1:8158863-8158882 None:intergenic 30.0%
AACCAATTTGAGTAAAGTCA+TGG + Chr1:8158149-8158168 MsG0180000583.01.T01:intron 30.0%
AAGTGTTAGTATATCAAGTG+TGG + Chr1:8156304-8156323 MsG0180000583.01.T01:intron 30.0%
ACAAAGTCAACTATCAACTT+TGG - Chr1:8154558-8154577 None:intergenic 30.0%
ACATACAACATCATTATCTC+AGG + Chr1:8153858-8153877 MsG0180000583.01.T01:CDS 30.0%
ACATTGTTCTTAATAGACCA+TGG + Chr1:8155195-8155214 MsG0180000583.01.T01:CDS 30.0%
AGAAAGACATTCATACTGTT+TGG + Chr1:8158246-8158265 MsG0180000583.01.T01:intron 30.0%
AGCACTTTCTCATATTTCTT+AGG - Chr1:8155449-8155468 None:intergenic 30.0%
ATCCATGACTTTACTCAAAT+TGG - Chr1:8158154-8158173 None:intergenic 30.0%
ATGACTTTACTCAAATTGGT+TGG - Chr1:8158150-8158169 None:intergenic 30.0%
ATGTATGGTGTGAAATAATC+AGG + Chr1:8157449-8157468 MsG0180000583.01.T01:intron 30.0%
ATTCCCAATTGGATCTATAT+TGG - Chr1:8155507-8155526 None:intergenic 30.0%
ATTTGAGTAAAGTCATGGAT+TGG + Chr1:8158154-8158173 MsG0180000583.01.T01:intron 30.0%
CAAATCATATCGTGTAAACA+GGG + Chr1:8156891-8156910 MsG0180000583.01.T01:intron 30.0%
CATTGTTCTTAATAGACCAT+GGG + Chr1:8155196-8155215 MsG0180000583.01.T01:CDS 30.0%
CTGATTCTGTTTACAATACA+TGG + Chr1:8154015-8154034 MsG0180000583.01.T01:CDS 30.0%
GAAAGACATTCATACTGTTT+GGG + Chr1:8158247-8158266 MsG0180000583.01.T01:intron 30.0%
GAACTGACATATGGAAAAAT+TGG + Chr1:8157474-8157493 MsG0180000583.01.T01:CDS 30.0%
GATTTGATAAGATTGGAAAC+TGG - Chr1:8156877-8156896 None:intergenic 30.0%
GCAATCACTATTTGACTATA+AGG - Chr1:8154687-8154706 None:intergenic 30.0%
GTAACCAATATAGATCCAAT+TGG + Chr1:8155500-8155519 MsG0180000583.01.T01:CDS 30.0%
GTTAAAAAAATGTATTGGGG+TGG + Chr1:8157870-8157889 MsG0180000583.01.T01:intron 30.0%
TAATTTAGTCCCTAAAACAG+TGG + Chr1:8154896-8154915 MsG0180000583.01.T01:intron 30.0%
TACTTGATCTTGGTGAAAAA+TGG + Chr1:8154289-8154308 MsG0180000583.01.T01:intron 30.0%
TAGGCTCGATATAAAAGAAA+GGG - Chr1:8155430-8155449 None:intergenic 30.0%
TAGTTGAGTTTGAGTGATTT+AGG + Chr1:8154375-8154394 MsG0180000583.01.T01:intron 30.0%
TATAGTCAAATAGTGATTGC+AGG + Chr1:8154687-8154706 MsG0180000583.01.T01:intron 30.0%
TCAAAAAAAGAAGAGCTTGA+AGG - Chr1:8158603-8158622 None:intergenic 30.0%
TCAAACTCAACTATCAACTA+TGG - Chr1:8154368-8154387 None:intergenic 30.0%
TCAAATCATATCGTGTAAAC+AGG + Chr1:8156890-8156909 MsG0180000583.01.T01:intron 30.0%
TGACTTTACTCAAATTGGTT+GGG - Chr1:8158149-8158168 None:intergenic 30.0%
TGATTCACTCCAAGAATATT+AGG - Chr1:8154875-8154894 None:intergenic 30.0%
TGGTAAAACTGATCAGTATA+TGG + Chr1:8154130-8154149 MsG0180000583.01.T01:CDS 30.0%
TGTATGGTGTGAAATAATCA+GGG + Chr1:8157450-8157469 MsG0180000583.01.T01:intron 30.0%
TTAGGCTCGATATAAAAGAA+AGG - Chr1:8155431-8155450 None:intergenic 30.0%
TTGAAGGTTCATTAATTCTG+GGG + Chr1:8155075-8155094 MsG0180000583.01.T01:intron 30.0%
TTGCTTAAGTCGTTAATGTA+TGG + Chr1:8157434-8157453 MsG0180000583.01.T01:intron 30.0%
TTGTATGAAATAAGTTACCG+AGG - Chr1:8159004-8159023 None:intergenic 30.0%
TTTAAACTGAGAAATGCTAG+TGG + Chr1:8154523-8154542 MsG0180000583.01.T01:intron 30.0%
TTTAAGAAGATGAAGGAAAG+TGG + Chr1:8154062-8154081 MsG0180000583.01.T01:CDS 30.0%
TTTGAATGTTTGGGAGATTT+GGG + Chr1:8158449-8158468 MsG0180000583.01.T01:intron 30.0%
TTTGAGAGTTTAGATCAGAA+AGG + Chr1:8157732-8157751 MsG0180000583.01.T01:intron 30.0%
TTTGAGTAAAGTCATGGATT+GGG + Chr1:8158155-8158174 MsG0180000583.01.T01:intron 30.0%
! AAGAGGGTATATGATAACAA+TGG - Chr1:8158199-8158218 None:intergenic 30.0%
! AGTGAATGATAACTTTTCCA+GGG - Chr1:8157678-8157697 None:intergenic 30.0%
! ATTGGATCTATATTGGTTAC+AGG - Chr1:8155500-8155519 None:intergenic 30.0%
! GATTGGTCATACAAATTAGT+TGG + Chr1:8158005-8158024 MsG0180000583.01.T01:intron 30.0%
! TAGTTGACTTTGTGTGATTT+AGG + Chr1:8154565-8154584 MsG0180000583.01.T01:intron 30.0%
! TCACTACTGTTATTTGGAAA+TGG + Chr1:8154658-8154677 MsG0180000583.01.T01:intron 30.0%
! TCTTCAAACAAGAAGCTTTT+TGG + Chr1:8157042-8157061 MsG0180000583.01.T01:intron 30.0%
! TTGGTTACATTAGTCCTTTT+GGG + Chr1:8154981-8155000 MsG0180000583.01.T01:intron 30.0%
! TTTACTAGGATTTTGCATTC+TGG + Chr1:8154110-8154129 MsG0180000583.01.T01:CDS 30.0%
! TTTATTGATGGTTTACGTGA+AGG - Chr1:8153915-8153934 None:intergenic 30.0%
! TTTTCCTGAATAGGAACAAT+TGG + Chr1:8158332-8158351 MsG0180000583.01.T01:intron 30.0%
! TTTTGAATGTTTGGGAGATT+TGG + Chr1:8158448-8158467 MsG0180000583.01.T01:intron 30.0%
!! AGCACAGTTTTTCTTTAAGA+GGG - Chr1:8158215-8158234 None:intergenic 30.0%
!! ATCTGTCATTTAGTTCTTTC+TGG + Chr1:8155550-8155569 MsG0180000583.01.T01:intron 30.0%
!! CAAATTTCAAAAATGGGTTG+TGG + Chr1:8153789-8153808 MsG0180000583.01.T01:exon 30.0%
!! GAAGAAGTTGGTGAATTATT+AGG - Chr1:8153724-8153743 None:intergenic 30.0%
!! TACTTCTAAAATCACACGTA+TGG - Chr1:8155661-8155680 None:intergenic 30.0%
!! TGTTGGTAACATATTACACA+AGG + Chr1:8155998-8156017 MsG0180000583.01.T01:CDS 30.0%
!! TTCATGATTCAGGTTGAATA+AGG + Chr1:8156023-8156042 MsG0180000583.01.T01:intron 30.0%
!!! CAATTTGGTTTTCCTTTTCT+AGG + Chr1:8158495-8158514 MsG0180000583.01.T01:intron 30.0%
!!! CTCTTCTTGTTTTGAATGTT+TGG + Chr1:8158439-8158458 MsG0180000583.01.T01:intron 30.0%
!!! GAAGCACTTTTTCTATTAAG+TGG - Chr1:8153960-8153979 None:intergenic 30.0%
!!! TGTGTCGGTTTTGTTTTTTT+GGG + Chr1:8157643-8157662 MsG0180000583.01.T01:intron 30.0%
AAAGGTTGAGCAACAAAAGT+AGG - Chr1:8154164-8154183 None:intergenic 35.0%
AAATTAGTTGGTCCTTGAAC+CGG + Chr1:8158017-8158036 MsG0180000583.01.T01:intron 35.0%
AACATGGATGAATGTTTCCT+TGG + Chr1:8155803-8155822 MsG0180000583.01.T01:CDS 35.0%
AAGGAAACATTCATCCATGT+TGG - Chr1:8155804-8155823 None:intergenic 35.0%
AAGGTTGAGCAACAAAAGTA+GGG - Chr1:8154163-8154182 None:intergenic 35.0%
AATAAACTGATCGACCCAAA+AGG - Chr1:8154998-8155017 None:intergenic 35.0%
AATGTATGTTCCTTTATGGC+AGG + Chr1:8155169-8155188 MsG0180000583.01.T01:intron 35.0%
ACAACACTACATGTACACAT+CGG + Chr1:8157400-8157419 MsG0180000583.01.T01:intron 35.0%
ACTTTACCCACAACAAGTAT+TGG + Chr1:8156549-8156568 MsG0180000583.01.T01:intron 35.0%
AGAGTTTAGATCAGAAAGGA+GGG + Chr1:8157736-8157755 MsG0180000583.01.T01:intron 35.0%
AGGATAAAGACTAGAGGATA+GGG + Chr1:8157768-8157787 MsG0180000583.01.T01:intron 35.0%
AGTAGTCTCTTATCTTGCAT+AGG + Chr1:8157804-8157823 MsG0180000583.01.T01:intron 35.0%
ATAATAGATCGGTACCTTCA+TGG - Chr1:8157365-8157384 None:intergenic 35.0%
ATGAAACATACCACACTTTC+TGG - Chr1:8157573-8157592 None:intergenic 35.0%
ATGTATGTTCCTTTATGGCA+GGG + Chr1:8155170-8155189 MsG0180000583.01.T01:intron 35.0%
ATGTTGGAGCAATCTTCTTA+AGG - Chr1:8155788-8155807 None:intergenic 35.0%
ATTACAGGTGAATTCCCAAT+TGG - Chr1:8155518-8155537 None:intergenic 35.0%
ATTCCAAACTGGTCATCATA+GGG + Chr1:8158725-8158744 MsG0180000583.01.T01:CDS 35.0%
CATATGGAAAAATTGGAGAG+TGG + Chr1:8157481-8157500 MsG0180000583.01.T01:CDS 35.0%
CTCTTAAAGAAAAACTGTGC+TGG + Chr1:8158214-8158233 MsG0180000583.01.T01:intron 35.0%
GACGAGTTTACGTTCAAATT+TGG + Chr1:8158976-8158995 MsG0180000583.01.T01:three_prime_UTR 35.0%
GAGAAAAAACGAGAGATATG+TGG - Chr1:8157000-8157019 None:intergenic 35.0%
GATAGTACTACTTAGAGAAG+TGG - Chr1:8155891-8155910 None:intergenic 35.0%
GGTTTCACAATGATATGATC+TGG - Chr1:8155368-8155387 None:intergenic 35.0%
GTGTTATCAAGGTTCTCATA+TGG + Chr1:8156078-8156097 MsG0180000583.01.T01:intron 35.0%
GTTATGAGGATAAAGACTAG+AGG + Chr1:8157762-8157781 MsG0180000583.01.T01:intron 35.0%
TAAGTGGCATCTTGATTACT+GGG - Chr1:8153944-8153963 None:intergenic 35.0%
TACCACAATAAGTGTTCAAG+AGG + Chr1:8156376-8156395 MsG0180000583.01.T01:intron 35.0%
TACGTATTATAGAGAGAGAG+AGG - Chr1:8157917-8157936 None:intergenic 35.0%
TACGTGATTCCTATAGTAAC+AGG - Chr1:8157069-8157088 None:intergenic 35.0%
TACGTTCAAATTTGGTACCT+CGG + Chr1:8158984-8159003 MsG0180000583.01.T01:three_prime_UTR 35.0%
TATTAGGCGGCTATATGAAA+GGG - Chr1:8153708-8153727 None:intergenic 35.0%
TATTCCAAACTGGTCATCAT+AGG + Chr1:8158724-8158743 MsG0180000583.01.T01:CDS 35.0%
TCAAAACAAGAAGAGCTTGA+AGG - Chr1:8158434-8158453 None:intergenic 35.0%
TGCTTGGTAAAAATGTGTTG+TGG + Chr1:8158886-8158905 MsG0180000583.01.T01:three_prime_UTR 35.0%
TGTGAAGAAGAAGAAGAAGT+TGG - Chr1:8153736-8153755 None:intergenic 35.0%
TGTTGGAGCAATCTTCTTAA+GGG - Chr1:8155787-8155806 None:intergenic 35.0%
TTAAGAAGATTGCTCCAACA+TGG + Chr1:8155787-8155806 MsG0180000583.01.T01:CDS 35.0%
TTAAGTGGCATCTTGATTAC+TGG - Chr1:8153945-8153964 None:intergenic 35.0%
TTATTAGGCGGCTATATGAA+AGG - Chr1:8153709-8153728 None:intergenic 35.0%
! AAACCGATAAAGCTTTTGGA+TGG + Chr1:8155844-8155863 MsG0180000583.01.T01:CDS 35.0%
! AAATTTGTCCTCAAGTTGTG+GGG - Chr1:8155115-8155134 None:intergenic 35.0%
! AACCGATAAAGCTTTTGGAT+GGG + Chr1:8155845-8155864 MsG0180000583.01.T01:CDS 35.0%
! AACGGTTAAGATTTGAAGCT+TGG - Chr1:8154768-8154787 None:intergenic 35.0%
! CAAATTTGTCCTCAAGTTGT+GGG - Chr1:8155116-8155135 None:intergenic 35.0%
! CAGCACAGTTTTTCTTTAAG+AGG - Chr1:8158216-8158235 None:intergenic 35.0%
! CAGTGAATGATAACTTTTCC+AGG - Chr1:8157679-8157698 None:intergenic 35.0%
! CTATGGATCCCTTGATTTTA+AGG + Chr1:8158277-8158296 MsG0180000583.01.T01:intron 35.0%
! CTTGGTTACATTAGTCCTTT+TGG + Chr1:8154980-8154999 MsG0180000583.01.T01:intron 35.0%
! GGGCAAAAGTTCATGTTTTT+GGG - Chr1:8159064-8159083 None:intergenic 35.0%
! GTGAATGATAACTTTTCCAG+GGG - Chr1:8157677-8157696 None:intergenic 35.0%
! TCAAATTTGTCCTCAAGTTG+TGG - Chr1:8155117-8155136 None:intergenic 35.0%
!! AACTGTCCAATACTTGTTGT+GGG - Chr1:8156558-8156577 None:intergenic 35.0%
!! ACTGGGTCGATTTTTATTGA+TGG - Chr1:8153927-8153946 None:intergenic 35.0%
!! CTTTTTGGTCCTGTTACTAT+AGG + Chr1:8157057-8157076 MsG0180000583.01.T01:intron 35.0%
!! GAAGTTGGTGAATTATTAGG+CGG - Chr1:8153721-8153740 None:intergenic 35.0%
!! TACTTGATTTTGGGGAAAGA+TGG + Chr1:8154456-8154475 MsG0180000583.01.T01:intron 35.0%
!!! AGTGAGGTTGGTAGATTTTT+AGG + Chr1:8154627-8154646 MsG0180000583.01.T01:intron 35.0%
!!! GTGAGGTTGGTAGATTTTTA+GGG + Chr1:8154628-8154647 MsG0180000583.01.T01:intron 35.0%
!!! GTGTGTCGGTTTTGTTTTTT+TGG + Chr1:8157642-8157661 MsG0180000583.01.T01:intron 35.0%
!!! TCCTTCACTTTTTTGTGTGT+CGG + Chr1:8157628-8157647 MsG0180000583.01.T01:intron 35.0%
!!! TCGGTTTTGTTTTTTTGGGA+GGG + Chr1:8157647-8157666 MsG0180000583.01.T01:intron 35.0%
AAAACTTGGTATCCGGTTCA+AGG - Chr1:8158032-8158051 None:intergenic 40.0%
AACTTAGCCAGAGATGGAAT+GGG + Chr1:8155395-8155414 MsG0180000583.01.T01:CDS 40.0%
AAGTAACCACACTAACACGA+AGG - Chr1:8157599-8157618 None:intergenic 40.0%
AAGTTGTTGTGAGGCTAAGA+AGG - Chr1:8155913-8155932 None:intergenic 40.0%
AATCAGGGTGAACTGACATA+TGG + Chr1:8157465-8157484 MsG0180000583.01.T01:intron 40.0%
ACAATGTAACCCTGCCATAA+AGG - Chr1:8155182-8155201 None:intergenic 40.0%
ACACAAGGACTTCATGATTC+AGG + Chr1:8156013-8156032 MsG0180000583.01.T01:CDS 40.0%
ACACGACTTCAAGTAAAGCA+CGG + Chr1:8156223-8156242 MsG0180000583.01.T01:intron 40.0%
ACAGCGGAAGACTCTATATA+GGG - Chr1:8156954-8156973 None:intergenic 40.0%
ACCGACACACAAAAAAGTGA+AGG - Chr1:8157632-8157651 None:intergenic 40.0%
ACTGCAAATCACTCATGTCT+GGG - Chr1:8156660-8156679 None:intergenic 40.0%
AGTATATCAAGTGTGGTGAG+TGG + Chr1:8156311-8156330 MsG0180000583.01.T01:intron 40.0%
AGTTGTGGGGTAGGTAAAAT+TGG - Chr1:8155102-8155121 None:intergenic 40.0%
AGTTTAGATCAGAAAGGAGG+GGG + Chr1:8157738-8157757 MsG0180000583.01.T01:intron 40.0%
ATGGAAAAATTGGAGAGTGG+AGG + Chr1:8157484-8157503 MsG0180000583.01.T01:CDS 40.0%
ATTATGTATGTCAGCCACCA+TGG + Chr1:8157284-8157303 MsG0180000583.01.T01:intron 40.0%
ATTCCATCTCTGGCTAAGTT+GGG - Chr1:8155395-8155414 None:intergenic 40.0%
CAATCTCAAAATCCACTTGC+AGG - Chr1:8157990-8158009 None:intergenic 40.0%
CACCTCTTGAACACTTATTG+TGG - Chr1:8156381-8156400 None:intergenic 40.0%
CCAGGAAAATCTTGTCTCAA+AGG - Chr1:8153891-8153910 None:intergenic 40.0%
CTAGGTGACTCTAGTGAAAA+TGG + Chr1:8158682-8158701 MsG0180000583.01.T01:intron 40.0%
GAGAGTTTAGATCAGAAAGG+AGG + Chr1:8157735-8157754 MsG0180000583.01.T01:intron 40.0%
GAGGATAAAGACTAGAGGAT+AGG + Chr1:8157767-8157786 MsG0180000583.01.T01:intron 40.0%
GAGTTTAGATCAGAAAGGAG+GGG + Chr1:8157737-8157756 MsG0180000583.01.T01:intron 40.0%
GATACCTTGCCAACAATTAC+AGG - Chr1:8155533-8155552 None:intergenic 40.0%
GGATTTCAAATGTCCTGCAT+AGG + Chr1:8156277-8156296 MsG0180000583.01.T01:intron 40.0%
GGCTTGGATGTTGTTGTAAA+CGG - Chr1:8154786-8154805 None:intergenic 40.0%
GGGAATTCACCTGTAATTGT+TGG + Chr1:8155521-8155540 MsG0180000583.01.T01:CDS 40.0%
GGTGATGACAATTCTGGTAT+GGG + Chr1:8154083-8154102 MsG0180000583.01.T01:CDS 40.0%
GGTTCTCATATGGCAATATG+TGG + Chr1:8156088-8156107 MsG0180000583.01.T01:intron 40.0%
GTGACATCTCATCAACAAAG+CGG + Chr1:8156702-8156721 MsG0180000583.01.T01:intron 40.0%
GTGTGTTATGAACTACACAG+CGG - Chr1:8156970-8156989 None:intergenic 40.0%
TAAAGACTAGAGGATAGGGA+AGG + Chr1:8157772-8157791 MsG0180000583.01.T01:intron 40.0%
TACAGTGTGATCAGAATGCA+GGG + Chr1:8158763-8158782 MsG0180000583.01.T01:three_prime_UTR 40.0%
TACTGTCCTGTGTGTTATCA+AGG + Chr1:8156067-8156086 MsG0180000583.01.T01:intron 40.0%
TAGAGGATAGGGAAGGATAA+TGG + Chr1:8157779-8157798 MsG0180000583.01.T01:intron 40.0%
TCACTAGAGTCACCTAGAAA+AGG - Chr1:8158679-8158698 None:intergenic 40.0%
TCCCTAAAACAGTGGATAAC+AGG + Chr1:8154904-8154923 MsG0180000583.01.T01:intron 40.0%
TGAGCCAATTGTTCCTATTC+AGG - Chr1:8158339-8158358 None:intergenic 40.0%
TGATGCCAATCTGTGACAAA+TGG - Chr1:8158797-8158816 None:intergenic 40.0%
TGGATGAACTAACGTGATTG+AGG + Chr1:8155032-8155051 MsG0180000583.01.T01:intron 40.0%
TGTAGATGACTTTACACCTG+AGG + Chr1:8158844-8158863 MsG0180000583.01.T01:three_prime_UTR 40.0%
TGTTTCCTTGGCAATGAAGA+AGG + Chr1:8155815-8155834 MsG0180000583.01.T01:CDS 40.0%
TTACAGTGTGATCAGAATGC+AGG + Chr1:8158762-8158781 MsG0180000583.01.T01:three_prime_UTR 40.0%
TTACTCAAATTGGTTGGGCT+CGG - Chr1:8158144-8158163 None:intergenic 40.0%
TTATGTATGTCAGCCACCAT+GGG + Chr1:8157285-8157304 MsG0180000583.01.T01:intron 40.0%
TTCACCTGTAATTGTTGGCA+AGG + Chr1:8155526-8155545 MsG0180000583.01.T01:CDS 40.0%
TTGTGCTAGGAGGAACAAAA+GGG - Chr1:8158091-8158110 None:intergenic 40.0%
TTTGTGCTAGGAGGAACAAA+AGG - Chr1:8158092-8158111 None:intergenic 40.0%
! CAACTGTCCAATACTTGTTG+TGG - Chr1:8156559-8156578 None:intergenic 40.0%
! CACCCATCCAAAAGCTTTAT+CGG - Chr1:8155850-8155869 None:intergenic 40.0%
! CATTGACTAAACTGTGAGTG+AGG + Chr1:8154611-8154630 MsG0180000583.01.T01:intron 40.0%
! CCAGTTTGGAATATTTGCTG+CGG - Chr1:8158717-8158736 None:intergenic 40.0%
! CCTGAAACCGATAAAGCTTT+TGG + Chr1:8155840-8155859 MsG0180000583.01.T01:CDS 40.0%
! GAAAGTGGTGATGACAATTC+TGG + Chr1:8154077-8154096 MsG0180000583.01.T01:CDS 40.0%
! GCCTGTTATCCACTGTTTTA+GGG - Chr1:8154908-8154927 None:intergenic 40.0%
! TGAGAACCTTGATAACACAC+AGG - Chr1:8156076-8156095 None:intergenic 40.0%
! TGCCTGTTATCCACTGTTTT+AGG - Chr1:8154909-8154928 None:intergenic 40.0%
! TGGGAAAGTGTACTTGATCT+TGG + Chr1:8154279-8154298 MsG0180000583.01.T01:intron 40.0%
! TGGTGATGACAATTCTGGTA+TGG + Chr1:8154082-8154101 MsG0180000583.01.T01:CDS 40.0%
! TGGTTCTGTCTATATCTCGT+TGG - Chr1:8153684-8153703 None:intergenic 40.0%
!! CCAAAAGCTTTATCGGTTTC+AGG - Chr1:8155843-8155862 None:intergenic 40.0%
!! TGTGTACTAGTCTTTGTGCT+AGG - Chr1:8158104-8158123 None:intergenic 40.0%
!!! CCTTTGAGACAAGATTTTCC+TGG + Chr1:8153888-8153907 MsG0180000583.01.T01:CDS 40.0%
!!! CGGTTTTGTTTTTTTGGGAG+GGG + Chr1:8157648-8157667 MsG0180000583.01.T01:intron 40.0%
!!! CTGCAAGTGGATTTTGAGAT+TGG + Chr1:8157988-8158007 MsG0180000583.01.T01:intron 40.0%
!!! GGAGAGTGTTTTTGAAAGAG+AGG - Chr1:8157969-8157988 None:intergenic 40.0%
!!! GGTGGCAATGTCAGATTTTT+TGG - Chr1:8157540-8157559 None:intergenic 40.0%
!!! GGTTTTGTTTTTTTGGGAGG+GGG + Chr1:8157649-8157668 MsG0180000583.01.T01:intron 40.0%
!!! GTCGGTTTTGTTTTTTTGGG+AGG + Chr1:8157646-8157665 MsG0180000583.01.T01:intron 40.0%
!!! GTTTTGTTTTTTTGGGAGGG+GGG + Chr1:8157650-8157669 MsG0180000583.01.T01:intron 40.0%
AAGCCCTATGATGACCAGTT+TGG - Chr1:8158731-8158750 None:intergenic 45.0%
ACCATGAAGAGCAGACGAAA+CGG - Chr1:8155979-8155998 None:intergenic 45.0%
ACTGTTTGGGAGAGTTGCTA+TGG + Chr1:8158260-8158279 MsG0180000583.01.T01:intron 45.0%
AGAACCTGATCCATTCCAGA+AGG - Chr1:8154188-8154207 None:intergenic 45.0%
AGCTTGAAGGAAACGTGTGA+TGG - Chr1:8158421-8158440 None:intergenic 45.0%
AGGATCCTTCTTCATTGCCA+AGG - Chr1:8155823-8155842 None:intergenic 45.0%
ATACCCAACTTAGCCAGAGA+TGG + Chr1:8155389-8155408 MsG0180000583.01.T01:CDS 45.0%
ATCATAGGGCTTTCTACAGG+TGG + Chr1:8158739-8158758 MsG0180000583.01.T01:exon 45.0%
CAAAAACACTCTCCTGCAAG+TGG + Chr1:8157975-8157994 MsG0180000583.01.T01:intron 45.0%
CAACTTAGCCAGAGATGGAA+TGG + Chr1:8155394-8155413 MsG0180000583.01.T01:CDS 45.0%
CACACACGAATACTCATGAC+AGG + Chr1:8156455-8156474 MsG0180000583.01.T01:intron 45.0%
CACAGCGGAAGACTCTATAT+AGG - Chr1:8156955-8156974 None:intergenic 45.0%
CACTGCAAATCACTCATGTC+TGG - Chr1:8156661-8156680 None:intergenic 45.0%
CAGCGGAAGACTCTATATAG+GGG - Chr1:8156953-8156972 None:intergenic 45.0%
CATCTTCCTTCGTGTTAGTG+TGG + Chr1:8157590-8157609 MsG0180000583.01.T01:intron 45.0%
CATTCCATCTCTGGCTAAGT+TGG - Chr1:8155396-8155415 None:intergenic 45.0%
CCGCAGCAAATATTCCAAAC+TGG + Chr1:8158714-8158733 MsG0180000583.01.T01:CDS 45.0%
CTAACACTTAAGGCCTATGC+AGG - Chr1:8156293-8156312 None:intergenic 45.0%
CTAGGCGACTCTAGTGAAAA+TGG + Chr1:8158513-8158532 MsG0180000583.01.T01:intron 45.0%
CTTGTGCAGCCATTTAGTCA+AGG + Chr1:8156256-8156275 MsG0180000583.01.T01:intron 45.0%
GACTAAACTGTGAGTGAGGT+TGG + Chr1:8154615-8154634 MsG0180000583.01.T01:intron 45.0%
GATGACAATTCTGGTATGGG+TGG + Chr1:8154086-8154105 MsG0180000583.01.T01:CDS 45.0%
GATTTGCAGTGGCAAGGAAT+GGG + Chr1:8156670-8156689 MsG0180000583.01.T01:intron 45.0%
GTCATCATAGGGCTTTCTAC+AGG + Chr1:8158736-8158755 MsG0180000583.01.T01:exon 45.0%
GTCATGAGTATTCGTGTGTG+AGG - Chr1:8156455-8156474 None:intergenic 45.0%
TACTCAAATTGGTTGGGCTC+GGG - Chr1:8158143-8158162 None:intergenic 45.0%
TCACTAGAGTCGCCTAGAAA+AGG - Chr1:8158510-8158529 None:intergenic 45.0%
TGATCCATTCCAGAAGGCAA+AGG - Chr1:8154182-8154201 None:intergenic 45.0%
TGGGTGTGACTATTCCATGA+AGG + Chr1:8157348-8157367 MsG0180000583.01.T01:CDS 45.0%
TGTGCTAGGAGGAACAAAAG+GGG - Chr1:8158090-8158109 None:intergenic 45.0%
TTGCCAAGTTCTTTGTCCCA+TGG - Chr1:8157304-8157323 None:intergenic 45.0%
TTTACCTACCCCACAACTTG+AGG + Chr1:8155104-8155123 MsG0180000583.01.T01:intron 45.0%
! AAGCCTTATCCCACTAAGTG+GGG + Chr1:8154801-8154820 MsG0180000583.01.T01:intron 45.0%
! ATGAGTGATTTGCAGTGGCA+AGG + Chr1:8156664-8156683 MsG0180000583.01.T01:intron 45.0%
! CAAGCCTTATCCCACTAAGT+GGG + Chr1:8154800-8154819 MsG0180000583.01.T01:intron 45.0%
! CAGACATGAGTGATTTGCAG+TGG + Chr1:8156659-8156678 MsG0180000583.01.T01:intron 45.0%
! CTGGTATGGGTGGATTTACT+AGG + Chr1:8154096-8154115 MsG0180000583.01.T01:CDS 45.0%
! TCAACCTTTGCCTTCTGGAA+TGG + Chr1:8154175-8154194 MsG0180000583.01.T01:CDS 45.0%
! TCTCTGGCTAAGTTGGGTAT+AGG - Chr1:8155389-8155408 None:intergenic 45.0%
! TGATTTGCAGTGGCAAGGAA+TGG + Chr1:8156669-8156688 MsG0180000583.01.T01:intron 45.0%
!! GTACTAGTCTTTGTGCTAGG+AGG - Chr1:8158101-8158120 None:intergenic 45.0%
!! TTTGCCTTCTGGAATGGATC+AGG + Chr1:8154181-8154200 MsG0180000583.01.T01:CDS 45.0%
!! TAAAATAAAAAATTTCAATA+TGG - Chr1:8158930-8158949 None:intergenic 5.0%
!!! TTTATATATTTATTTTTTCT+GGG + Chr1:8154233-8154252 MsG0180000583.01.T01:intron 5.0%
!!! TTTTATATATTTATTTTTTC+TGG + Chr1:8154232-8154251 MsG0180000583.01.T01:intron 5.0%
AAGTACTACCCCGAGGAGAA+TGG + Chr1:8155473-8155492 MsG0180000583.01.T01:CDS 50.0%
AATCTGACATTGCCACCACC+TGG + Chr1:8157543-8157562 MsG0180000583.01.T01:CDS 50.0%
ACCTGGTGTTCCAGAAAGTG+TGG + Chr1:8157560-8157579 MsG0180000583.01.T01:CDS 50.0%
AGAAAGGAGGGGGAGTTATG+AGG + Chr1:8157748-8157767 MsG0180000583.01.T01:intron 50.0%
AGCCACTGTACAAATGCCCA+TGG - Chr1:8155215-8155234 None:intergenic 50.0%
AGGCGGCTATATGAAAGGGT+TGG - Chr1:8153704-8153723 None:intergenic 50.0%
ATGTAGCCAACCCCACTTAG+TGG - Chr1:8154814-8154833 None:intergenic 50.0%
CAACCCCACTTAGTGGGATA+AGG - Chr1:8154807-8154826 None:intergenic 50.0%
CCAAGTTCTTTGTCCCATGG+TGG - Chr1:8157301-8157320 None:intergenic 50.0%
CCACCATGGGACAAAGAACT+TGG + Chr1:8157298-8157317 MsG0180000583.01.T01:CDS 50.0%
CCACTTAGTGGGATAAGGCT+TGG - Chr1:8154802-8154821 None:intergenic 50.0%
CTTATCCCACTAAGTGGGGT+TGG + Chr1:8154805-8154824 MsG0180000583.01.T01:intron 50.0%
GACCATGGGCATTTGTACAG+TGG + Chr1:8155210-8155229 MsG0180000583.01.T01:CDS 50.0%
GATGGTTTACGTGAAGGACC+AGG - Chr1:8153909-8153928 None:intergenic 50.0%
GGTTACAGGTCCATTCTCCT+CGG - Chr1:8155486-8155505 None:intergenic 50.0%
GTGCTAGGAGGAACAAAAGG+GGG - Chr1:8158089-8158108 None:intergenic 50.0%
GTGGTGAGTGGTGATTCTAG+AGG + Chr1:8156323-8156342 MsG0180000583.01.T01:intron 50.0%
GTTACAGGTCCATTCTCCTC+GGG - Chr1:8155485-8155504 None:intergenic 50.0%
GTTGCTCAACCTTTGCCTTC+TGG + Chr1:8154170-8154189 MsG0180000583.01.T01:CDS 50.0%
TCGTCTGCTCTTCATGGTGT+TGG + Chr1:8155981-8156000 MsG0180000583.01.T01:CDS 50.0%
TGTAGCCAACCCCACTTAGT+GGG - Chr1:8154813-8154832 None:intergenic 50.0%
TTACAGGTCCATTCTCCTCG+GGG - Chr1:8155484-8155503 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG + Chr1:8154799-8154818 MsG0180000583.01.T01:intron 50.0%
! TTGTCCTCAAGTTGTGGGGT+AGG - Chr1:8155111-8155130 None:intergenic 50.0%
!! ACACTTTCTGGAACACCAGG+TGG - Chr1:8157561-8157580 None:intergenic 50.0%
!! ACCACACTTTCTGGAACACC+AGG - Chr1:8157564-8157583 None:intergenic 50.0%
!! GCGTGCCATTTGTCACAGAT+TGG + Chr1:8158789-8158808 MsG0180000583.01.T01:three_prime_UTR 50.0%
!! GCTAAGAAAGTACTACCCCG+AGG + Chr1:8155466-8155485 MsG0180000583.01.T01:CDS 50.0%
CAAATTGGTTGGGCTCGGGT+TGG - Chr1:8158139-8158158 None:intergenic 55.0%
CTAGGAGGAACAAAAGGGGG+AGG - Chr1:8158086-8158105 None:intergenic 55.0%
GCCGTTTCGTCTGCTCTTCA+TGG + Chr1:8155975-8155994 MsG0180000583.01.T01:CDS 55.0%
TGCAGCTCCCATTCCATCTC+TGG - Chr1:8155405-8155424 None:intergenic 55.0%
!! CTTTCTGGAACACCAGGTGG+TGG - Chr1:8157558-8157577 None:intergenic 55.0%
!! ATTGGTTGGGCTCGGGTTGG+TGG - Chr1:8158136-8158155 None:intergenic 60.0%
!! GGTTGGGCTCGGGTTGGTGG+CGG - Chr1:8158133-8158152 None:intergenic 70.0%
!! GTTGGGCTCGGGTTGGTGGC+GGG - Chr1:8158132-8158151 None:intergenic 70.0%
!! TTGGGCTCGGGTTGGTGGCG+GGG - Chr1:8158131-8158150 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr1 gene 8153677 8159083 8153677 ID=MsG0180000583.01;Name=MsG0180000583.01
Chr1 mRNA 8153677 8159083 8153677 ID=MsG0180000583.01.T01;Parent=MsG0180000583.01;Name=MsG0180000583.01.T01;_AED=0.46;_eAED=0.46;_QI=124|1|1|1|1|1|8|338|360
Chr1 exon 8158686 8159083 8158686 ID=MsG0180000583.01.T01:exon:2599;Parent=MsG0180000583.01.T01
Chr1 exon 8157471 8157581 8157471 ID=MsG0180000583.01.T01:exon:2598;Parent=MsG0180000583.01.T01
Chr1 exon 8157298 8157369 8157298 ID=MsG0180000583.01.T01:exon:2597;Parent=MsG0180000583.01.T01
Chr1 exon 8155965 8156034 8155965 ID=MsG0180000583.01.T01:exon:2596;Parent=MsG0180000583.01.T01
Chr1 exon 8155780 8155877 8155780 ID=MsG0180000583.01.T01:exon:2595;Parent=MsG0180000583.01.T01
Chr1 exon 8155346 8155547 8155346 ID=MsG0180000583.01.T01:exon:2594;Parent=MsG0180000583.01.T01
Chr1 exon 8155191 8155258 8155191 ID=MsG0180000583.01.T01:exon:2593;Parent=MsG0180000583.01.T01
Chr1 exon 8153677 8154202 8153677 ID=MsG0180000583.01.T01:exon:2592;Parent=MsG0180000583.01.T01
Chr1 five_prime_UTR 8153677 8153800 8153677 ID=MsG0180000583.01.T01:five_prime_utr;Parent=MsG0180000583.01.T01
Chr1 CDS 8153801 8154202 8153801 ID=MsG0180000583.01.T01:cds;Parent=MsG0180000583.01.T01
Chr1 CDS 8155191 8155258 8155191 ID=MsG0180000583.01.T01:cds;Parent=MsG0180000583.01.T01
Chr1 CDS 8155346 8155547 8155346 ID=MsG0180000583.01.T01:cds;Parent=MsG0180000583.01.T01
Chr1 CDS 8155780 8155877 8155780 ID=MsG0180000583.01.T01:cds;Parent=MsG0180000583.01.T01
Chr1 CDS 8155965 8156034 8155965 ID=MsG0180000583.01.T01:cds;Parent=MsG0180000583.01.T01
Chr1 CDS 8157298 8157369 8157298 ID=MsG0180000583.01.T01:cds;Parent=MsG0180000583.01.T01
Chr1 CDS 8157471 8157581 8157471 ID=MsG0180000583.01.T01:cds;Parent=MsG0180000583.01.T01
Chr1 CDS 8158686 8158745 8158686 ID=MsG0180000583.01.T01:cds;Parent=MsG0180000583.01.T01
Chr1 three_prime_UTR 8158746 8159083 8158746 ID=MsG0180000583.01.T01:three_prime_utr;Parent=MsG0180000583.01.T01
Gene Sequence

>MsG0180000583.01.T01

ATGGGTTGTGGAAACATGTTTTTCACAATCCTAATAACATTCTCAGTAACATTAATAACATACAACATCATTATCTCAGGAAACGCACCTTTGAGACAAGATTTTCCTGGTCCTTCACGTAAACCATCAATAAAAATCGACCCAGTAATCAAGATGCCACTTAATAGAAAAAGTGCTTCTTCTAAGAGATTATTTCATACAGCAGTTACAGCTTCTGATTCTGTTTACAATACATGGCAGTGTAGAGTTATGTATTATTGGTTTAAGAAGATGAAGGAAAGTGGTGATGACAATTCTGGTATGGGTGGATTTACTAGGATTTTGCATTCTGGTAAAACTGATCAGTATATGGATGAGATCCCTACTTTTGTTGCTCAACCTTTGCCTTCTGGAATGGATCAGGGTTACATTGTTCTTAATAGACCATGGGCATTTGTACAGTGGCTTCAACAAGCAGATATCAAAGAAGATTACATATTGATGTCAGAGCCAGATCATATCATTGTGAAACCTATACCCAACTTAGCCAGAGATGGAATGGGAGCTGCATTCCCTTTCTTTTATATCGAGCCTAAGAAATATGAGAAAGTGCTAAGAAAGTACTACCCCGAGGAGAATGGACCTGTAACCAATATAGATCCAATTGGGAATTCACCTGTAATTGTTGGCAAGGAATCCCTTAAGAAGATTGCTCCAACATGGATGAATGTTTCCTTGGCAATGAAGAAGGATCCTGAAACCGATAAAGCTTTTGGATGGGTGCTTGAAATGTATGCTTATGCCGTTTCGTCTGCTCTTCATGGTGTTGGTAACATATTACACAAGGACTTCATGATTCAGCCACCATGGGACAAAGAACTTGGCAAGACGTTCATAATTCACTACACTTATGGGTGTGACTATTCCATGAAGGGTGAACTGACATATGGAAAAATTGGAGAGTGGAGGTTTGATAAAAGATCTTATGATCTTGTTGCTCCAAAAAATCTGACATTGCCACCACCTGGTGTTCCAGAAAGTGTGGTGACTCTAGTGAAAATGGTTAATGAAGCCGCAGCAAATATTCCAAACTGGTCATCATAG

Protein sequence

>MsG0180000583.01.T01

MGCGNMFFTILITFSVTLITYNIIISGNAPLRQDFPGPSRKPSIKIDPVIKMPLNRKSASSKRLFHTAVTASDSVYNTWQCRVMYYWFKKMKESGDDNSGMGGFTRILHSGKTDQYMDEIPTFVAQPLPSGMDQGYIVLNRPWAFVQWLQQADIKEDYILMSEPDHIIVKPIPNLARDGMGAAFPFFYIEPKKYEKVLRKYYPEENGPVTNIDPIGNSPVIVGKESLKKIAPTWMNVSLAMKKDPETDKAFGWVLEMYAYAVSSALHGVGNILHKDFMIQPPWDKELGKTFIIHYTYGCDYSMKGELTYGKIGEWRFDKRSYDLVAPKNLTLPPPGVPESVVTLVKMVNEAAANIPNWSS*