Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021347.01.T01 | AES89295.1 | 90.323 | 93 | 9 | 0 | 1 | 93 | 1 | 93 | 2.35E-55 | 176 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021347.01.T01 | P33079 | 69.892 | 93 | 28 | 0 | 1 | 93 | 1 | 93 | 1.19E-45 | 144 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021347.01.T01 | A0A396I6Z0 | 90.323 | 93 | 9 | 0 | 1 | 93 | 58 | 150 | 1.57e-55 | 178 |
| MsG0480021347.01.T01 | G7JL20 | 90.323 | 93 | 9 | 0 | 1 | 93 | 1 | 93 | 1.12e-55 | 176 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048780.01 | MsG0480021347.01 | 0.800736 | 1.252910e-48 | 5.878163e-46 |
| MsG0080048801.01 | MsG0480021347.01 | 0.802675 | 5.012918e-49 | 2.470413e-46 |
| MsG0080048845.01 | MsG0480021347.01 | 0.819544 | 1.098439e-52 | 8.477980e-50 |
| MsG0080049040.01 | MsG0480021347.01 | 0.814411 | 1.562251e-51 | 1.047553e-48 |
| MsG0180000671.01 | MsG0480021347.01 | 0.802115 | 6.539261e-49 | 3.176904e-46 |
| MsG0180001064.01 | MsG0480021347.01 | 0.803313 | 3.699896e-49 | 1.853274e-46 |
| MsG0180001085.01 | MsG0480021347.01 | 0.825050 | 5.791028e-54 | 5.220750e-51 |
| MsG0180001270.01 | MsG0480021347.01 | 0.820404 | 6.981557e-53 | 5.519241e-50 |
| MsG0180003146.01 | MsG0480021347.01 | 0.801189 | 1.012303e-48 | 4.804210e-46 |
| MsG0180003906.01 | MsG0480021347.01 | 0.814412 | 1.560808e-51 | 1.046630e-48 |
| MsG0180004103.01 | MsG0480021347.01 | 0.815306 | 9.892054e-52 | 6.795283e-49 |
| MsG0180004735.01 | MsG0480021347.01 | 0.840238 | 9.806246e-58 | 1.388270e-54 |
| MsG0180005349.01 | MsG0480021347.01 | 0.803578 | 3.261115e-49 | 1.644784e-46 |
| MsG0180005568.01 | MsG0480021347.01 | 0.824906 | 6.262933e-54 | 5.623135e-51 |
| MsG0280010975.01 | MsG0480021347.01 | 0.842386 | 2.669182e-58 | 4.040813e-55 |
| MsG0280011270.01 | MsG0480021347.01 | 0.800367 | 1.490141e-48 | 6.926156e-46 |
| MsG0380013472.01 | MsG0480021347.01 | 0.827689 | 1.361938e-54 | 1.324351e-51 |
| MsG0380014007.01 | MsG0480021347.01 | 0.805554 | 1.262194e-49 | 6.697405e-47 |
| MsG0480019501.01 | MsG0480021347.01 | 0.800004 | 1.765821e-48 | 8.132038e-46 |
| MsG0480019971.01 | MsG0480021347.01 | 0.843138 | 1.684718e-58 | 2.610745e-55 |
| MsG0480020350.01 | MsG0480021347.01 | 0.800707 | 1.270155e-48 | 5.954410e-46 |
| MsG0480020690.01 | MsG0480021347.01 | 0.812332 | 4.471577e-51 | 2.835184e-48 |
| MsG0480020783.01 | MsG0480021347.01 | 0.806604 | 7.587761e-50 | 4.135907e-47 |
| MsG0480021168.01 | MsG0480021347.01 | 0.806280 | 8.880622e-50 | 4.800798e-47 |
| MsG0480021294.01 | MsG0480021347.01 | 0.800969 | 1.123005e-48 | 5.300225e-46 |
| MsG0480021303.01 | MsG0480021347.01 | 0.809575 | 1.768384e-50 | 1.042100e-47 |
| MsG0480021347.01 | MsG0480021783.01 | 0.804269 | 2.342884e-49 | 1.202714e-46 |
| MsG0480021347.01 | MsG0480022260.01 | 0.802818 | 4.684413e-49 | 2.317106e-46 |
| MsG0480021347.01 | MsG0480022647.01 | 0.802956 | 4.386350e-49 | 2.177151e-46 |
| MsG0480021347.01 | MsG0480023216.01 | 0.818881 | 1.554767e-52 | 1.178189e-49 |
| MsG0480021347.01 | MsG0480023314.01 | 0.801467 | 8.883460e-49 | 4.245408e-46 |
| MsG0480021347.01 | MsG0480023661.01 | 0.819079 | 1.401986e-52 | 1.068149e-49 |
| MsG0480021347.01 | MsG0480023845.01 | 0.809691 | 1.670031e-50 | 9.871488e-48 |
| MsG0480021347.01 | MsG0480023990.01 | 0.833037 | 6.712623e-56 | 7.638568e-53 |
| MsG0480021347.01 | MsG0480023991.01 | 0.815512 | 8.898398e-52 | 6.147808e-49 |
| MsG0480021347.01 | MsG0480023992.01 | 0.833865 | 4.171813e-56 | 4.866583e-53 |
| MsG0480021347.01 | MsG0580024679.01 | 0.801142 | 1.035277e-48 | 4.907473e-46 |
| MsG0480021347.01 | MsG0580024759.01 | 0.813808 | 2.121693e-51 | 1.399588e-48 |
| MsG0480021347.01 | MsG0580024873.01 | 0.814785 | 1.290880e-51 | 8.742965e-49 |
| MsG0480021347.01 | MsG0580025411.01 | 0.816186 | 6.297390e-52 | 4.431569e-49 |
| MsG0480021347.01 | MsG0580027725.01 | 0.802693 | 4.970430e-49 | 2.450645e-46 |
| MsG0480021347.01 | MsG0580028024.01 | 0.833771 | 4.404129e-56 | 5.122935e-53 |
| MsG0480021347.01 | MsG0580028306.01 | 0.807613 | 4.639901e-50 | 2.596030e-47 |
| MsG0480021347.01 | MsG0580028335.01 | 0.817142 | 3.843962e-52 | 2.776784e-49 |
| MsG0480021347.01 | MsG0580028723.01 | 0.817787 | 2.750703e-52 | 2.022531e-49 |
| MsG0480021347.01 | MsG0580029414.01 | 0.852667 | 3.971530e-61 | 8.360288e-58 |
| MsG0480021347.01 | MsG0680030680.01 | 0.801830 | 7.483414e-49 | 3.609476e-46 |
| MsG0480021347.01 | MsG0680030858.01 | 0.811256 | 7.668009e-51 | 4.723763e-48 |
| MsG0480021347.01 | MsG0680032954.01 | 0.805169 | 1.519840e-49 | 7.985427e-47 |
| MsG0480021347.01 | MsG0680034064.01 | 0.806979 | 6.322739e-50 | 3.479885e-47 |
| MsG0480021347.01 | MsG0680035731.01 | 0.824156 | 9.402447e-54 | 8.261761e-51 |
| MsG0480021347.01 | MsG0780039233.01 | 0.825706 | 4.050733e-54 | 3.720542e-51 |
| MsG0480021347.01 | MsG0780039975.01 | 0.859488 | 3.996015e-63 | 1.057154e-59 |
| MsG0480021347.01 | MsG0780040343.01 | 0.812034 | 5.192605e-51 | 3.265504e-48 |
| MsG0480021347.01 | MsG0780041004.01 | 0.815214 | 1.036922e-51 | 7.104678e-49 |
| MsG0480021347.01 | MsG0880044487.01 | 0.809366 | 1.960953e-50 | 1.149155e-47 |
| MsG0480021347.01 | MsG0880045558.01 | 0.807357 | 5.258405e-50 | 2.922663e-47 |
| MsG0480021347.01 | MsG0880046764.01 | 0.823919 | 1.068494e-53 | 9.326406e-51 |
| MsG0480021347.01 | MsG0880046791.01 | 0.808557 | 2.920543e-50 | 1.675087e-47 |
| MsG0380015603.01 | MsG0480021347.01 | 0.819651 | 1.038172e-52 | 8.036742e-50 |
| MsG0380015896.01 | MsG0480021347.01 | 0.809143 | 2.188721e-50 | 1.275028e-47 |
| MsG0380016284.01 | MsG0480021347.01 | 0.804411 | 2.188073e-49 | 1.127362e-46 |
| MsG0380016762.01 | MsG0480021347.01 | 0.802019 | 6.841588e-49 | 3.315762e-46 |
| MsG0380017661.01 | MsG0480021347.01 | 0.808534 | 2.954997e-50 | 1.693811e-47 |
| MsG0380018037.01 | MsG0480021347.01 | 0.806676 | 7.325913e-50 | 4.000444e-47 |
| MsG0380018069.01 | MsG0480021347.01 | 0.827602 | 1.428874e-54 | 1.385891e-51 |
| MsG0280009635.01 | MsG0480021347.01 | 0.809832 | 1.556791e-50 | 9.236597e-48 |
| MsG0280009756.01 | MsG0480021347.01 | 0.802003 | 6.893309e-49 | 3.339446e-46 |
| MsG0280010198.01 | MsG0480021347.01 | 0.808327 | 3.271308e-50 | 1.865100e-47 |
| MsG0280010353.01 | MsG0480021347.01 | 0.813332 | 2.700435e-51 | 1.758429e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0480021386.01 | MsG0480021347.01 | PPI |
| MsG0480021386.01 | MsG0480021347.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021347.01.T01 | MTR_4g072220 | 90.323 | 93 | 9 | 0 | 1 | 93 | 1 | 93 | 2.85e-59 | 176 |
| MsG0480021347.01.T01 | MTR_4g072890 | 90.110 | 91 | 9 | 0 | 1 | 91 | 1 | 91 | 1.73e-58 | 174 |
| MsG0480021347.01.T01 | MTR_4g072260 | 88.172 | 93 | 11 | 0 | 1 | 93 | 1 | 93 | 7.93e-58 | 172 |
| MsG0480021347.01.T01 | MTR_4g072300 | 85.714 | 91 | 13 | 0 | 1 | 91 | 1 | 91 | 5.96e-56 | 168 |
| MsG0480021347.01.T01 | MTR_4g072240 | 84.615 | 91 | 14 | 0 | 1 | 91 | 1 | 91 | 7.86e-55 | 165 |
| MsG0480021347.01.T01 | MTR_4g072870 | 79.121 | 91 | 19 | 0 | 1 | 91 | 1 | 91 | 1.09e-50 | 154 |
| MsG0480021347.01.T01 | MTR_4g072310 | 63.441 | 93 | 34 | 0 | 1 | 93 | 1 | 93 | 2.42e-42 | 133 |
| MsG0480021347.01.T01 | MTR_3g084240 | 66.667 | 93 | 30 | 1 | 1 | 93 | 1 | 92 | 1.97e-41 | 131 |
| MsG0480021347.01.T01 | MTR_4g072500 | 63.441 | 93 | 33 | 1 | 1 | 93 | 1 | 92 | 3.61e-41 | 130 |
| MsG0480021347.01.T01 | MTR_4g072370 | 64.835 | 91 | 29 | 1 | 1 | 91 | 1 | 88 | 6.36e-41 | 130 |
| MsG0480021347.01.T01 | MTR_3g084150 | 64.516 | 93 | 32 | 1 | 1 | 93 | 1 | 92 | 7.20e-41 | 130 |
| MsG0480021347.01.T01 | MTR_4g072580 | 65.934 | 91 | 25 | 1 | 1 | 91 | 1 | 85 | 7.41e-41 | 129 |
| MsG0480021347.01.T01 | MTR_3g084170 | 66.667 | 93 | 30 | 1 | 1 | 93 | 1 | 92 | 1.00e-40 | 129 |
| MsG0480021347.01.T01 | MTR_3g110038 | 68.817 | 93 | 28 | 1 | 1 | 93 | 1 | 92 | 1.01e-40 | 129 |
| MsG0480021347.01.T01 | MTR_3g110032 | 63.441 | 93 | 34 | 0 | 1 | 93 | 1 | 93 | 2.62e-40 | 128 |
| MsG0480021347.01.T01 | MTR_4g072280 | 80.000 | 75 | 15 | 0 | 1 | 75 | 1 | 75 | 3.35e-40 | 127 |
| MsG0480021347.01.T01 | MTR_3g084180 | 63.441 | 93 | 33 | 1 | 1 | 93 | 1 | 92 | 4.35e-40 | 128 |
| MsG0480021347.01.T01 | MTR_4g072330 | 64.835 | 91 | 29 | 1 | 1 | 91 | 1 | 88 | 6.36e-40 | 127 |
| MsG0480021347.01.T01 | MTR_4g072570 | 63.441 | 93 | 33 | 1 | 1 | 93 | 1 | 92 | 7.45e-40 | 127 |
| MsG0480021347.01.T01 | MTR_4g072530 | 63.736 | 91 | 32 | 1 | 1 | 91 | 1 | 90 | 1.16e-39 | 127 |
| MsG0480021347.01.T01 | MTR_4g072880 | 60.215 | 93 | 37 | 0 | 1 | 93 | 1 | 93 | 1.50e-39 | 126 |
| MsG0480021347.01.T01 | MTR_4g072640 | 63.736 | 91 | 32 | 1 | 1 | 91 | 1 | 90 | 1.68e-39 | 126 |
| MsG0480021347.01.T01 | MTR_4g072230 | 61.290 | 93 | 34 | 1 | 1 | 93 | 1 | 91 | 1.84e-39 | 126 |
| MsG0480021347.01.T01 | MTR_8g461410 | 62.366 | 93 | 34 | 1 | 1 | 93 | 1 | 92 | 1.93e-39 | 126 |
| MsG0480021347.01.T01 | MTR_4g072250 | 62.366 | 93 | 34 | 1 | 1 | 93 | 1 | 92 | 2.30e-39 | 126 |
| MsG0480021347.01.T01 | MTR_4g072630 | 67.033 | 91 | 25 | 1 | 1 | 91 | 1 | 86 | 3.77e-39 | 125 |
| MsG0480021347.01.T01 | MTR_4g072830 | 64.835 | 91 | 29 | 1 | 1 | 91 | 1 | 88 | 4.29e-39 | 125 |
| MsG0480021347.01.T01 | MTR_4g050700 | 62.366 | 93 | 35 | 0 | 1 | 93 | 1 | 93 | 5.34e-39 | 125 |
| MsG0480021347.01.T01 | MTR_2g012410 | 62.366 | 93 | 35 | 0 | 1 | 93 | 1 | 93 | 5.34e-39 | 125 |
| MsG0480021347.01.T01 | MTR_3g084250 | 64.516 | 93 | 32 | 1 | 1 | 93 | 1 | 92 | 5.85e-39 | 125 |
| MsG0480021347.01.T01 | MTR_3g084220 | 64.516 | 93 | 32 | 1 | 1 | 93 | 1 | 92 | 7.45e-39 | 124 |
| MsG0480021347.01.T01 | MTR_4g072860 | 61.290 | 93 | 36 | 0 | 1 | 93 | 1 | 93 | 8.38e-39 | 124 |
| MsG0480021347.01.T01 | MTR_3g117630 | 61.111 | 90 | 35 | 0 | 4 | 93 | 3 | 92 | 4.31e-38 | 122 |
| MsG0480021347.01.T01 | MTR_3g110042 | 65.556 | 90 | 30 | 1 | 1 | 90 | 1 | 89 | 5.02e-38 | 122 |
| MsG0480021347.01.T01 | MTR_4g072600 | 63.736 | 91 | 27 | 1 | 1 | 91 | 1 | 85 | 6.23e-38 | 122 |
| MsG0480021347.01.T01 | MTR_4g072470 | 63.736 | 91 | 27 | 1 | 1 | 91 | 1 | 85 | 9.74e-38 | 122 |
| MsG0480021347.01.T01 | MTR_4g072740 | 63.736 | 91 | 27 | 1 | 1 | 91 | 1 | 85 | 1.04e-37 | 121 |
| MsG0480021347.01.T01 | MTR_4g072490 | 63.736 | 91 | 27 | 1 | 1 | 91 | 1 | 85 | 1.74e-37 | 121 |
| MsG0480021347.01.T01 | MTR_4g072480 | 59.140 | 93 | 37 | 1 | 1 | 93 | 1 | 92 | 2.02e-37 | 121 |
| MsG0480021347.01.T01 | MTR_4g072270 | 59.140 | 93 | 38 | 0 | 1 | 93 | 1 | 93 | 3.41e-37 | 120 |
| MsG0480021347.01.T01 | MTR_4g072680 | 60.215 | 93 | 36 | 1 | 1 | 93 | 1 | 92 | 5.36e-37 | 120 |
| MsG0480021347.01.T01 | MTR_4g072730 | 57.609 | 92 | 38 | 1 | 1 | 92 | 1 | 91 | 1.29e-36 | 119 |
| MsG0480021347.01.T01 | MTR_4g072850 | 63.830 | 94 | 33 | 1 | 1 | 93 | 1 | 94 | 1.37e-36 | 119 |
| MsG0480021347.01.T01 | MTR_4g072620 | 56.989 | 93 | 39 | 1 | 1 | 93 | 1 | 92 | 2.41e-36 | 118 |
| MsG0480021347.01.T01 | MTR_4g072610 | 61.538 | 91 | 28 | 1 | 1 | 91 | 1 | 84 | 3.00e-36 | 118 |
| MsG0480021347.01.T01 | MTR_4g072820 | 61.957 | 92 | 29 | 1 | 1 | 92 | 1 | 86 | 3.66e-36 | 117 |
| MsG0480021347.01.T01 | MTR_3g084260 | 59.140 | 93 | 38 | 0 | 1 | 93 | 1 | 93 | 4.34e-36 | 117 |
| MsG0480021347.01.T01 | MTR_3g084190 | 68.817 | 93 | 28 | 1 | 1 | 93 | 1 | 92 | 8.22e-36 | 117 |
| MsG0480021347.01.T01 | MTR_4g072460 | 59.140 | 93 | 37 | 1 | 1 | 93 | 1 | 92 | 8.50e-36 | 117 |
| MsG0480021347.01.T01 | MTR_3g084210 | 65.591 | 93 | 31 | 1 | 1 | 93 | 1 | 92 | 3.69e-35 | 115 |
| MsG0480021347.01.T01 | MTR_3g084160 | 66.667 | 93 | 30 | 1 | 1 | 93 | 1 | 92 | 4.50e-35 | 115 |
| MsG0480021347.01.T01 | MTR_4g072650 | 61.538 | 91 | 28 | 1 | 1 | 91 | 1 | 84 | 4.76e-35 | 115 |
| MsG0480021347.01.T01 | MTR_8g461420 | 65.591 | 93 | 31 | 1 | 1 | 93 | 1 | 92 | 6.11e-35 | 115 |
| MsG0480021347.01.T01 | MTR_4g072540 | 60.440 | 91 | 31 | 1 | 1 | 91 | 1 | 86 | 7.97e-35 | 114 |
| MsG0480021347.01.T01 | MTR_4g072670 | 60.440 | 91 | 31 | 1 | 1 | 91 | 1 | 86 | 9.81e-35 | 114 |
| MsG0480021347.01.T01 | MTR_4g072510 | 61.538 | 91 | 30 | 1 | 1 | 91 | 1 | 86 | 2.41e-34 | 113 |
| MsG0480021347.01.T01 | MTR_3g084230 | 64.516 | 93 | 32 | 1 | 1 | 93 | 1 | 92 | 3.13e-34 | 113 |
| MsG0480021347.01.T01 | MTR_4g072465 | 58.242 | 91 | 33 | 1 | 1 | 91 | 1 | 86 | 4.45e-34 | 112 |
| MsG0480021347.01.T01 | MTR_4g072660 | 55.914 | 93 | 35 | 1 | 1 | 93 | 1 | 87 | 7.51e-34 | 112 |
| MsG0480021347.01.T01 | MTR_4g072940 | 68.056 | 72 | 23 | 0 | 22 | 93 | 53 | 124 | 1.22e-33 | 112 |
| MsG0480021347.01.T01 | MTR_3g110045 | 69.444 | 72 | 22 | 0 | 22 | 93 | 80 | 151 | 2.05e-33 | 113 |
| MsG0480021347.01.T01 | MTR_4g072720 | 58.242 | 91 | 33 | 1 | 1 | 91 | 1 | 86 | 4.91e-33 | 110 |
| MsG0480021347.01.T01 | MTR_4g072590 | 65.854 | 82 | 28 | 0 | 10 | 91 | 4 | 85 | 8.17e-33 | 109 |
| MsG0480021347.01.T01 | MTR_5g008350 | 66.250 | 80 | 21 | 1 | 1 | 80 | 1 | 74 | 1.01e-32 | 108 |
| MsG0480021347.01.T01 | MTR_4g072450 | 67.073 | 82 | 27 | 0 | 10 | 91 | 4 | 85 | 1.12e-32 | 108 |
| MsG0480021347.01.T01 | MTR_4g072380 | 62.500 | 88 | 28 | 1 | 1 | 88 | 1 | 83 | 2.26e-32 | 108 |
| MsG0480021347.01.T01 | MTR_4g072690 | 65.854 | 82 | 28 | 0 | 10 | 91 | 4 | 85 | 3.43e-32 | 107 |
| MsG0480021347.01.T01 | MTR_5g008360 | 57.831 | 83 | 35 | 0 | 11 | 93 | 1 | 83 | 5.55e-32 | 107 |
| MsG0480021347.01.T01 | MTR_3g084200 | 67.123 | 73 | 23 | 1 | 1 | 73 | 1 | 72 | 5.35e-31 | 105 |
| MsG0480021347.01.T01 | MTR_4g072550 | 63.014 | 73 | 27 | 0 | 21 | 93 | 31 | 103 | 1.08e-30 | 104 |
| MsG0480021347.01.T01 | MTR_5g008370 | 67.647 | 68 | 22 | 0 | 25 | 92 | 24 | 91 | 3.19e-30 | 104 |
| MsG0480021347.01.T01 | MTR_4g072910 | 62.687 | 67 | 25 | 0 | 25 | 91 | 34 | 100 | 6.09e-30 | 102 |
| MsG0480021347.01.T01 | MTR_3g117640 | 65.217 | 69 | 23 | 1 | 25 | 92 | 33 | 101 | 6.56e-30 | 102 |
| MsG0480021347.01.T01 | MTR_4g072980 | 50.526 | 95 | 45 | 2 | 1 | 93 | 1 | 95 | 7.12e-30 | 102 |
| MsG0480021347.01.T01 | MTR_4g072770 | 64.179 | 67 | 24 | 0 | 26 | 92 | 15 | 81 | 4.63e-29 | 99.8 |
| MsG0480021347.01.T01 | MTR_4g072560 | 59.091 | 66 | 26 | 1 | 26 | 90 | 32 | 97 | 5.49e-27 | 95.1 |
| MsG0480021347.01.T01 | MTR_4g072750 | 62.667 | 75 | 25 | 2 | 1 | 73 | 1 | 74 | 1.98e-26 | 93.2 |
| MsG0480021347.01.T01 | MTR_4g072930 | 42.718 | 103 | 48 | 2 | 1 | 92 | 9 | 111 | 2.02e-25 | 91.7 |
| MsG0480021347.01.T01 | MTR_4g072290 | 46.237 | 93 | 36 | 1 | 1 | 93 | 1 | 79 | 3.52e-24 | 87.4 |
| MsG0480021347.01.T01 | MTR_3g110035 | 59.091 | 66 | 27 | 0 | 28 | 93 | 73 | 138 | 6.09e-23 | 85.9 |
| MsG0480021347.01.T01 | MTR_3g117610 | 56.923 | 65 | 27 | 1 | 24 | 88 | 43 | 106 | 3.37e-22 | 83.6 |
| MsG0480021347.01.T01 | MTR_3g113310 | 52.239 | 67 | 31 | 1 | 24 | 90 | 40 | 105 | 6.97e-22 | 82.4 |
| MsG0480021347.01.T01 | MTR_4g072190 | 46.988 | 83 | 40 | 2 | 8 | 90 | 21 | 99 | 9.29e-21 | 79.3 |
| MsG0480021347.01.T01 | MTR_6g077850 | 47.761 | 67 | 35 | 0 | 25 | 91 | 33 | 99 | 1.27e-20 | 79.0 |
| MsG0480021347.01.T01 | MTR_5g021820 | 47.619 | 84 | 40 | 3 | 10 | 90 | 21 | 103 | 8.38e-20 | 77.0 |
| MsG0480021347.01.T01 | MTR_8g461400 | 46.237 | 93 | 23 | 2 | 1 | 93 | 1 | 66 | 3.66e-19 | 74.3 |
| MsG0480021347.01.T01 | MTR_8g076040 | 46.429 | 84 | 41 | 2 | 8 | 88 | 20 | 102 | 8.39e-19 | 74.7 |
| MsG0480021347.01.T01 | MTR_2g043960 | 59.322 | 59 | 23 | 1 | 25 | 83 | 75 | 132 | 1.36e-18 | 75.5 |
| MsG0480021347.01.T01 | MTR_4g124750 | 48.148 | 81 | 40 | 2 | 4 | 83 | 46 | 125 | 1.68e-18 | 75.1 |
| MsG0480021347.01.T01 | MTR_4g025830 | 47.945 | 73 | 34 | 2 | 23 | 92 | 76 | 147 | 6.09e-18 | 73.9 |
| MsG0480021347.01.T01 | MTR_3g092220 | 44.156 | 77 | 40 | 2 | 9 | 83 | 16 | 91 | 7.64e-18 | 72.4 |
| MsG0480021347.01.T01 | MTR_7g118010 | 53.968 | 63 | 26 | 2 | 26 | 86 | 23 | 84 | 2.82e-17 | 70.9 |
| MsG0480021347.01.T01 | MTR_4g072160 | 45.000 | 80 | 43 | 1 | 4 | 83 | 15 | 93 | 4.45e-17 | 71.2 |
| MsG0480021347.01.T01 | MTR_4g005310 | 45.455 | 77 | 35 | 2 | 17 | 86 | 47 | 123 | 8.49e-17 | 70.9 |
| MsG0480021347.01.T01 | MTR_0388s0020 | 40.449 | 89 | 48 | 3 | 7 | 92 | 57 | 143 | 2.17e-16 | 69.7 |
| MsG0480021347.01.T01 | MTR_8g026730 | 47.059 | 68 | 33 | 2 | 26 | 91 | 27 | 93 | 4.00e-16 | 67.8 |
| MsG0480021347.01.T01 | MTR_4g072840 | 44.565 | 92 | 20 | 3 | 1 | 92 | 1 | 61 | 1.28e-15 | 65.1 |
| MsG0480021347.01.T01 | MTR_1g024085 | 45.000 | 80 | 32 | 2 | 4 | 83 | 26 | 93 | 1.29e-15 | 67.4 |
| MsG0480021347.01.T01 | MTR_1g094750 | 42.308 | 78 | 40 | 2 | 13 | 86 | 33 | 109 | 2.64e-15 | 65.9 |
| MsG0480021347.01.T01 | MTR_1g009150 | 50.000 | 62 | 30 | 1 | 17 | 78 | 62 | 122 | 1.54e-14 | 65.5 |
| MsG0480021347.01.T01 | MTR_1g061570 | 51.667 | 60 | 26 | 2 | 25 | 84 | 18 | 74 | 2.59e-14 | 63.5 |
| MsG0480021347.01.T01 | MTR_3g097120 | 40.000 | 80 | 39 | 2 | 19 | 90 | 2 | 80 | 2.69e-14 | 63.2 |
| MsG0480021347.01.T01 | MTR_1g063950 | 41.935 | 62 | 35 | 1 | 25 | 86 | 47 | 107 | 9.46e-14 | 62.0 |
| MsG0480021347.01.T01 | MTR_2g066830 | 40.580 | 69 | 39 | 2 | 10 | 78 | 43 | 109 | 1.18e-13 | 62.4 |
| MsG0480021347.01.T01 | MTR_7g101740 | 44.118 | 68 | 37 | 1 | 25 | 92 | 39 | 105 | 1.34e-13 | 61.6 |
| MsG0480021347.01.T01 | MTR_8g461210 | 48.148 | 54 | 27 | 1 | 25 | 78 | 34 | 86 | 4.00e-13 | 60.5 |
| MsG0480021347.01.T01 | MTR_4g005320 | 50.943 | 53 | 25 | 1 | 26 | 78 | 70 | 121 | 5.66e-13 | 61.2 |
| MsG0480021347.01.T01 | MTR_7g405740 | 38.667 | 75 | 45 | 1 | 12 | 86 | 53 | 126 | 8.10e-13 | 60.5 |
| MsG0480021347.01.T01 | MTR_3g109160 | 46.479 | 71 | 37 | 1 | 8 | 78 | 51 | 120 | 2.10e-12 | 59.7 |
| MsG0480021347.01.T01 | MTR_1g059770 | 43.103 | 58 | 32 | 1 | 26 | 83 | 49 | 105 | 1.37e-11 | 56.6 |
| MsG0480021347.01.T01 | MTR_8g094980 | 37.500 | 80 | 36 | 2 | 24 | 90 | 1 | 79 | 1.74e-11 | 55.8 |
| MsG0480021347.01.T01 | MTR_3g105900 | 63.889 | 36 | 13 | 0 | 25 | 60 | 1171 | 1206 | 3.86e-11 | 58.2 |
| MsG0480021347.01.T01 | MTR_8g101520 | 43.750 | 64 | 35 | 1 | 27 | 90 | 51 | 113 | 4.54e-11 | 55.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021347.01.T01 | AT2G21210 | 51.042 | 96 | 43 | 2 | 1 | 92 | 1 | 96 | 1.22e-32 | 109 |
| MsG0480021347.01.T01 | AT4G38840 | 70.588 | 68 | 19 | 1 | 25 | 91 | 32 | 99 | 2.55e-32 | 108 |
| MsG0480021347.01.T01 | AT2G21210 | 51.042 | 96 | 43 | 2 | 1 | 92 | 68 | 163 | 6.27e-32 | 109 |
| MsG0480021347.01.T01 | AT5G18080 | 61.333 | 75 | 28 | 1 | 17 | 90 | 15 | 89 | 4.67e-31 | 105 |
| MsG0480021347.01.T01 | AT5G18020 | 58.667 | 75 | 30 | 1 | 17 | 90 | 15 | 89 | 1.08e-30 | 104 |
| MsG0480021347.01.T01 | AT5G18060 | 67.692 | 65 | 20 | 1 | 27 | 90 | 25 | 89 | 5.20e-30 | 102 |
| MsG0480021347.01.T01 | AT5G18050 | 65.152 | 66 | 22 | 1 | 26 | 90 | 24 | 89 | 6.62e-30 | 102 |
| MsG0480021347.01.T01 | AT5G18030 | 65.152 | 66 | 22 | 1 | 26 | 90 | 22 | 87 | 2.63e-29 | 100 |
| MsG0480021347.01.T01 | AT5G18010 | 57.333 | 75 | 31 | 1 | 17 | 90 | 15 | 89 | 4.08e-29 | 100 |
| MsG0480021347.01.T01 | AT3G03820 | 54.348 | 92 | 36 | 2 | 2 | 90 | 6 | 94 | 7.99e-29 | 99.8 |
| MsG0480021347.01.T01 | AT4G34770 | 65.714 | 70 | 22 | 1 | 25 | 92 | 34 | 103 | 1.12e-28 | 99.8 |
| MsG0480021347.01.T01 | AT4G38825 | 58.108 | 74 | 30 | 1 | 18 | 90 | 15 | 88 | 1.38e-28 | 99.0 |
| MsG0480021347.01.T01 | AT2G21200 | 58.333 | 72 | 29 | 1 | 20 | 90 | 15 | 86 | 2.50e-28 | 98.2 |
| MsG0480021347.01.T01 | AT4G34810 | 63.380 | 71 | 21 | 2 | 25 | 90 | 47 | 117 | 4.59e-28 | 98.6 |
| MsG0480021347.01.T01 | AT4G38850 | 61.765 | 68 | 23 | 1 | 26 | 90 | 21 | 88 | 4.66e-28 | 97.4 |
| MsG0480021347.01.T01 | AT3G03840 | 60.563 | 71 | 26 | 1 | 22 | 90 | 23 | 93 | 6.71e-28 | 97.4 |
| MsG0480021347.01.T01 | AT4G34790 | 69.841 | 63 | 17 | 1 | 26 | 86 | 39 | 101 | 1.69e-27 | 96.7 |
| MsG0480021347.01.T01 | AT4G34800 | 50.562 | 89 | 36 | 2 | 1 | 86 | 1 | 84 | 3.16e-27 | 95.5 |
| MsG0480021347.01.T01 | AT3G03850 | 54.023 | 87 | 33 | 2 | 6 | 90 | 10 | 91 | 1.29e-26 | 94.0 |
| MsG0480021347.01.T01 | AT3G03830 | 56.522 | 69 | 27 | 1 | 25 | 90 | 23 | 91 | 1.96e-24 | 88.6 |
| MsG0480021347.01.T01 | AT4G13790 | 47.945 | 73 | 36 | 1 | 20 | 90 | 19 | 91 | 1.01e-23 | 86.7 |
| MsG0480021347.01.T01 | AT4G34780 | 54.930 | 71 | 29 | 2 | 24 | 91 | 26 | 96 | 2.67e-23 | 86.3 |
| MsG0480021347.01.T01 | AT4G38860 | 50.000 | 84 | 39 | 1 | 8 | 88 | 19 | 102 | 2.97e-22 | 83.6 |
| MsG0480021347.01.T01 | AT1G75580 | 48.889 | 90 | 38 | 2 | 8 | 90 | 19 | 107 | 1.69e-21 | 81.6 |
| MsG0480021347.01.T01 | AT2G21220 | 45.349 | 86 | 43 | 2 | 8 | 90 | 19 | 103 | 2.27e-20 | 78.6 |
| MsG0480021347.01.T01 | AT4G34760 | 52.239 | 67 | 31 | 1 | 24 | 90 | 41 | 106 | 2.35e-20 | 78.6 |
| MsG0480021347.01.T01 | AT1G19830 | 53.731 | 67 | 30 | 1 | 24 | 90 | 46 | 111 | 3.00e-19 | 76.3 |
| MsG0480021347.01.T01 | AT3G43120 | 57.627 | 59 | 24 | 1 | 25 | 83 | 78 | 135 | 3.59e-19 | 77.0 |
| MsG0480021347.01.T01 | AT5G20810 | 59.322 | 59 | 23 | 1 | 25 | 83 | 78 | 135 | 2.73e-18 | 75.1 |
| MsG0480021347.01.T01 | AT2G16580 | 52.308 | 65 | 30 | 1 | 24 | 88 | 42 | 105 | 5.60e-18 | 72.8 |
| MsG0480021347.01.T01 | AT5G20810 | 59.322 | 59 | 23 | 1 | 25 | 83 | 78 | 135 | 6.47e-18 | 74.3 |
| MsG0480021347.01.T01 | AT2G18010 | 48.611 | 72 | 36 | 1 | 17 | 88 | 39 | 109 | 1.74e-17 | 71.6 |
| MsG0480021347.01.T01 | AT4G36110 | 51.562 | 64 | 30 | 1 | 25 | 88 | 39 | 101 | 3.32e-17 | 70.5 |
| MsG0480021347.01.T01 | AT5G66260 | 53.030 | 66 | 30 | 1 | 26 | 91 | 34 | 98 | 1.09e-16 | 68.9 |
| MsG0480021347.01.T01 | AT2G46690 | 47.826 | 69 | 32 | 2 | 18 | 83 | 16 | 83 | 9.05e-16 | 67.4 |
| MsG0480021347.01.T01 | AT4G12410 | 47.143 | 70 | 33 | 2 | 26 | 92 | 76 | 144 | 1.12e-15 | 68.2 |
| MsG0480021347.01.T01 | AT3G51200 | 49.275 | 69 | 33 | 2 | 25 | 92 | 38 | 105 | 1.25e-15 | 66.6 |
| MsG0480021347.01.T01 | AT2G45210 | 38.961 | 77 | 43 | 2 | 19 | 92 | 72 | 147 | 1.79e-15 | 67.4 |
| MsG0480021347.01.T01 | AT3G20220 | 54.237 | 59 | 25 | 2 | 26 | 83 | 47 | 104 | 2.72e-15 | 65.9 |
| MsG0480021347.01.T01 | AT1G75590 | 47.887 | 71 | 32 | 2 | 13 | 83 | 33 | 98 | 5.28e-15 | 66.2 |
| MsG0480021347.01.T01 | AT2G37030 | 45.161 | 62 | 33 | 1 | 25 | 86 | 48 | 108 | 6.52e-15 | 65.1 |
| MsG0480021347.01.T01 | AT3G60690 | 42.857 | 70 | 36 | 2 | 26 | 92 | 88 | 156 | 1.14e-14 | 65.5 |
| MsG0480021347.01.T01 | AT5G10990 | 40.449 | 89 | 42 | 3 | 10 | 92 | 29 | 112 | 1.37e-14 | 65.1 |
| MsG0480021347.01.T01 | AT4G00880 | 55.738 | 61 | 24 | 2 | 25 | 83 | 27 | 86 | 1.51e-14 | 64.3 |
| MsG0480021347.01.T01 | AT1G19840 | 45.946 | 74 | 35 | 2 | 10 | 83 | 29 | 97 | 1.91e-14 | 64.7 |
| MsG0480021347.01.T01 | AT4G22620 | 38.095 | 84 | 48 | 2 | 12 | 92 | 65 | 147 | 5.69e-14 | 63.5 |
| MsG0480021347.01.T01 | AT3G12830 | 48.438 | 64 | 28 | 2 | 15 | 78 | 43 | 101 | 1.51e-13 | 62.0 |
| MsG0480021347.01.T01 | AT3G61900 | 48.387 | 62 | 28 | 2 | 25 | 83 | 29 | 89 | 2.67e-13 | 61.2 |
| MsG0480021347.01.T01 | AT4G34750 | 41.935 | 62 | 35 | 1 | 25 | 86 | 36 | 96 | 2.98e-13 | 61.6 |
| MsG0480021347.01.T01 | AT4G34750 | 41.935 | 62 | 35 | 1 | 25 | 86 | 36 | 96 | 2.98e-13 | 61.6 |
| MsG0480021347.01.T01 | AT3G53250 | 39.726 | 73 | 39 | 2 | 14 | 86 | 41 | 108 | 4.08e-13 | 60.5 |
| MsG0480021347.01.T01 | AT5G53590 | 38.889 | 72 | 38 | 2 | 25 | 91 | 45 | 115 | 4.74e-13 | 60.8 |
| MsG0480021347.01.T01 | AT3G53250 | 39.726 | 73 | 39 | 2 | 14 | 86 | 72 | 139 | 6.79e-13 | 60.8 |
| MsG0480021347.01.T01 | AT1G56150 | 42.857 | 63 | 35 | 1 | 16 | 78 | 28 | 89 | 1.40e-12 | 58.9 |
| MsG0480021347.01.T01 | AT3G03847 | 54.717 | 53 | 22 | 2 | 34 | 86 | 80 | 130 | 2.09e-12 | 58.9 |
| MsG0480021347.01.T01 | AT4G09530 | 38.356 | 73 | 42 | 2 | 17 | 86 | 19 | 91 | 1.08e-11 | 56.6 |
| MsG0480021347.01.T01 | AT4G31320 | 46.552 | 58 | 30 | 1 | 21 | 78 | 75 | 131 | 1.18e-11 | 58.2 |
| MsG0480021347.01.T01 | AT1G16510 | 47.170 | 53 | 27 | 1 | 26 | 78 | 54 | 105 | 2.45e-11 | 56.6 |
| MsG0480021347.01.T01 | AT2G24400 | 50.943 | 53 | 25 | 1 | 26 | 78 | 64 | 115 | 4.74e-11 | 56.2 |
Find 21 sgRNAs with CRISPR-Local
Find 24 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGGTAGATTCTTGTGTTT+TGG | 0.198943 | 4:-56910780 | None:intergenic |
| TTTAGAAATTCTTGAAATAA+TGG | 0.250295 | 4:-56910890 | None:intergenic |
| AATCAATCTGAAGAAGAATT+TGG | 0.255440 | 4:+56910911 | MsG0480021347.01.T01:CDS |
| GGTTGGTTCAAGTATGATAC+TGG | 0.408482 | 4:-56910869 | None:intergenic |
| TAGACTGCAAGATAGCCTTT+TGG | 0.442040 | 4:-56910815 | None:intergenic |
| GAAATTCTTGAAATAATGGT+TGG | 0.477679 | 4:-56910886 | None:intergenic |
| GGCTATCTTGCAGTCTACGT+TGG | 0.536328 | 4:+56910821 | MsG0480021347.01.T01:CDS |
| TTTGGATATGATCATCCAAT+GGG | 0.541874 | 4:+56910929 | MsG0480021347.01.T01:CDS |
| ATTTGGATATGATCATCCAA+TGG | 0.556875 | 4:+56910928 | MsG0480021347.01.T01:CDS |
| AAGGGACTTGAAGTCCCAAA+AGG | 0.558728 | 4:+56910800 | MsG0480021347.01.T01:CDS |
| AAGAATTCTTCCTCGCCACA+AGG | 0.598793 | 4:-56910965 | None:intergenic |
| TTCTGATAAGCTTTGCTATG+CGG | 0.610874 | 4:-56910745 | None:intergenic |
| GGAATTGTGAGACCACCCAT+TGG | 0.611158 | 4:-56910944 | None:intergenic |
| TCTACGTTGGAGATCAAATG+AGG | 0.626265 | 4:+56910834 | MsG0480021347.01.T01:CDS |
| CAAAACACAAGAATCTACCA+AGG | 0.648832 | 4:+56910781 | MsG0480021347.01.T01:CDS |
| GGATATGATCATCCAATGGG+TGG | 0.655640 | 4:+56910932 | MsG0480021347.01.T01:CDS |
| TCTCACAATTCCTTGTGGCG+AGG | 0.669649 | 4:+56910955 | MsG0480021347.01.T01:CDS |
| AAAACACAAGAATCTACCAA+GGG | 0.681268 | 4:+56910782 | MsG0480021347.01.T01:CDS |
| GGTGGTCTCACAATTCCTTG+TGG | 0.694357 | 4:+56910950 | MsG0480021347.01.T01:CDS |
| ACGTTGGAGATCAAATGAGG+CGG | 0.704375 | 4:+56910837 | MsG0480021347.01.T01:CDS |
| GCGCACTCAAGCGAGAACTG+AGG | 0.739137 | 4:-56910991 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTAGAAATTCTTGAAATAA+TGG | - | Chr4:56910893-56910912 | None:intergenic | 15.0% |
| ! | AATCAATCTGAAGAAGAATT+TGG | + | Chr4:56910911-56910930 | MsG0480021347.01.T01:CDS | 25.0% |
| ! | GAAATTCTTGAAATAATGGT+TGG | - | Chr4:56910889-56910908 | None:intergenic | 25.0% |
| AAAACACAAGAATCTACCAA+GGG | + | Chr4:56910782-56910801 | MsG0480021347.01.T01:CDS | 30.0% | |
| ATTTGGATATGATCATCCAA+TGG | + | Chr4:56910928-56910947 | MsG0480021347.01.T01:CDS | 30.0% | |
| TTTGGATATGATCATCCAAT+GGG | + | Chr4:56910929-56910948 | MsG0480021347.01.T01:CDS | 30.0% | |
| !!! | TCTTGTGTTTTGGAAAATGA+TGG | - | Chr4:56910773-56910792 | None:intergenic | 30.0% |
| CAAAACACAAGAATCTACCA+AGG | + | Chr4:56910781-56910800 | MsG0480021347.01.T01:CDS | 35.0% | |
| ! | CTTGGTAGATTCTTGTGTTT+TGG | - | Chr4:56910783-56910802 | None:intergenic | 35.0% |
| ! | TTCTGATAAGCTTTGCTATG+CGG | - | Chr4:56910748-56910767 | None:intergenic | 35.0% |
| TCTACGTTGGAGATCAAATG+AGG | + | Chr4:56910834-56910853 | MsG0480021347.01.T01:CDS | 40.0% | |
| ! | AGACTGCAAGATAGCCTTTT+GGG | - | Chr4:56910817-56910836 | None:intergenic | 40.0% |
| ! | GGTTGGTTCAAGTATGATAC+TGG | - | Chr4:56910872-56910891 | None:intergenic | 40.0% |
| ! | TAGACTGCAAGATAGCCTTT+TGG | - | Chr4:56910818-56910837 | None:intergenic | 40.0% |
| AAGAATTCTTCCTCGCCACA+AGG | - | Chr4:56910968-56910987 | None:intergenic | 45.0% | |
| AAGGGACTTGAAGTCCCAAA+AGG | + | Chr4:56910800-56910819 | MsG0480021347.01.T01:CDS | 45.0% | |
| ACGTTGGAGATCAAATGAGG+CGG | + | Chr4:56910837-56910856 | MsG0480021347.01.T01:CDS | 45.0% | |
| GGATATGATCATCCAATGGG+TGG | + | Chr4:56910932-56910951 | MsG0480021347.01.T01:CDS | 45.0% | |
| !!! | TTTTGGGACTTCAAGTCCCT+TGG | - | Chr4:56910801-56910820 | None:intergenic | 45.0% |
| GGAATTGTGAGACCACCCAT+TGG | - | Chr4:56910947-56910966 | None:intergenic | 50.0% | |
| GGCTATCTTGCAGTCTACGT+TGG | + | Chr4:56910821-56910840 | MsG0480021347.01.T01:CDS | 50.0% | |
| GGTGGTCTCACAATTCCTTG+TGG | + | Chr4:56910950-56910969 | MsG0480021347.01.T01:CDS | 50.0% | |
| TCTCACAATTCCTTGTGGCG+AGG | + | Chr4:56910955-56910974 | MsG0480021347.01.T01:CDS | 50.0% | |
| GCGCACTCAAGCGAGAACTG+AGG | - | Chr4:56910994-56911013 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 56910737 | 56911018 | 56910737 | ID=MsG0480021347.01;Name=MsG0480021347.01 |
| Chr4 | mRNA | 56910737 | 56911018 | 56910737 | ID=MsG0480021347.01.T01;Parent=MsG0480021347.01;Name=MsG0480021347.01.T01;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|1|1|0|93 |
| Chr4 | exon | 56910737 | 56911018 | 56910737 | ID=MsG0480021347.01.T01:exon:7123;Parent=MsG0480021347.01.T01 |
| Chr4 | CDS | 56910737 | 56911018 | 56910737 | ID=MsG0480021347.01.T01:cds;Parent=MsG0480021347.01.T01 |
| Gene Sequence |
| Protein sequence |
