AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580024679.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580024679.01.T01 MTR_5g014290 95.158 475 22 1 1 475 1 474 0.0 885
MsG0580024679.01.T01 MTR_8g019500 25.559 313 201 9 172 470 243 537 4.87e-18 87.0
MsG0580024679.01.T01 MTR_7g038720 25.240 313 202 9 172 470 244 538 1.08e-17 86.3
MsG0580024679.01.T01 MTR_7g030030 25.240 313 202 9 172 470 244 538 1.08e-17 86.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580024679.01.T01 AT1G32500 58.458 467 183 5 13 470 11 475 0.0 540
MsG0580024679.01.T01 AT4G04770 26.263 297 194 7 172 455 254 538 1.93e-19 91.7

Find 133 sgRNAs with CRISPR-Local

Find 260 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGATTGGGGCGGGGAGGATT+TGG 0.223915 5:+8052152 None:intergenic
AAGTCAGATTAAAAGTTTAT+TGG 0.227386 5:-8049474 MsG0580024679.01.T01:CDS
TGGACGGTGGAGATTTATTT+TGG 0.233451 5:-8051952 MsG0580024679.01.T01:CDS
TGGTGGTGGTGGTTGGGATT+GGG 0.235303 5:+8052137 None:intergenic
GTGGTGGTGGTGGTTGGGAT+TGG 0.236284 5:+8052136 None:intergenic
GATTGGGGCGGGGAGGATTT+GGG 0.272960 5:+8052153 None:intergenic
TCTATCTCTAATGGAAGAAT+TGG 0.279363 5:+8049502 None:intergenic
GGTGGTGGTGGTTGGGATTG+GGG 0.279949 5:+8052138 None:intergenic
GGTTGAAACTCCGGTTCATT+TGG 0.289943 5:-8051870 MsG0580024679.01.T01:CDS
GCCTCAATTGTTACAATTGC+CGG 0.290023 5:+8049305 None:intergenic
TGTTATTGCTAAGAGGGTTT+TGG 0.313556 5:-8051990 MsG0580024679.01.T01:CDS
ACAGAAGTTGGCTTTGTTCC+AGG 0.315039 5:+8049609 None:intergenic
ACGGAAACGTTAAGGTTAAC+AGG 0.324284 5:-8050472 MsG0580024679.01.T01:intron
TCAGCAATGATTTGGAGATT+TGG 0.333268 5:+8049668 None:intergenic
GGAATGATAATGAGTGTTAT+TGG 0.334871 5:-8051730 MsG0580024679.01.T01:CDS
GTGGTGGTTGGGATTGGGGC+GGG 0.338823 5:+8052142 None:intergenic
AGCTTGATAAAAGTATAAAT+TGG 0.339576 5:-8049393 MsG0580024679.01.T01:three_prime_UTR
GTTGAATGTGACTCTGGTTT+TGG 0.342738 5:+8052363 None:intergenic
AGAAGAAGATGATGGGATTA+TGG 0.348829 5:+8052417 None:intergenic
TTATGTACCGGAGGGTGTTC+AGG 0.356045 5:-8051891 MsG0580024679.01.T01:CDS
ACCTACAATTGTGATCATTT+AGG 0.356993 5:+8049443 None:intergenic
TGACGTCATCAGCAATGATT+TGG 0.358930 5:+8049660 None:intergenic
ACGTGGCAGGGGAATTGATC+GGG 0.365093 5:+8052106 None:intergenic
TATATCGAATCCGAGGGTTT+TGG 0.370433 5:-8051801 MsG0580024679.01.T01:CDS
GTAAGCACAGGAGGCAAACT+TGG 0.373309 5:-8050680 MsG0580024679.01.T01:CDS
TTATTGGAGTAATGCTGTTT+TGG 0.374251 5:-8051714 MsG0580024679.01.T01:CDS
ACTTCGTACTCTATCTCTAA+TGG 0.380409 5:+8049493 None:intergenic
TGGTGGTTGGGATTGGGGCG+GGG 0.391272 5:+8052143 None:intergenic
TTGGAGGTTGTGATTGGGGA+AGG 0.394788 5:-8051695 MsG0580024679.01.T01:CDS
ACAATCAACTTCAAAATTCT+CGG 0.395737 5:-8052059 MsG0580024679.01.T01:CDS
GTTGAAACTCCGGTTCATTT+GGG 0.396052 5:-8051869 MsG0580024679.01.T01:CDS
TTGATTCAGAAACAGCTAGA+AGG 0.399795 5:-8049568 MsG0580024679.01.T01:CDS
TCTTCACAGTAGTCTTGTAT+TGG 0.400205 5:-8050567 MsG0580024679.01.T01:CDS
GATATAGTTGAGGAGTTTGA+AGG 0.406381 5:-8051752 MsG0580024679.01.T01:CDS
TTTGGAATTGGTATCTGGAT+TGG 0.420346 5:-8051972 MsG0580024679.01.T01:CDS
TCCTAAATGATCACAATTGT+AGG 0.421889 5:-8049444 MsG0580024679.01.T01:exon
TGTAGGGACGGAGTCTTCTA+AGG 0.425260 5:+8052291 None:intergenic
CAAATGGACTTCTGTTCGTC+AGG 0.432884 5:-8051618 MsG0580024679.01.T01:intron
ACATAAACCACCGTCAAATC+CGG 0.439129 5:+8051908 None:intergenic
TGGTTGGGATTGGGGCGGGG+AGG 0.441570 5:+8052146 None:intergenic
TCAGCGAGGTCGAGAATGAA+TGG 0.453976 5:+8052316 None:intergenic
GGTGGTGGTTGGGATTGGGG+CGG 0.456675 5:+8052141 None:intergenic
GATAACTCTGTCACTGTGTC+CGG 0.460261 5:+8050626 None:intergenic
GATTTGGGATGAGCGGAGGA+AGG 0.467041 5:+8052168 None:intergenic
TGAATGGTGTTATTGCTAAG+AGG 0.467060 5:-8051997 MsG0580024679.01.T01:CDS
GGTAATTTGTCAAAATTGAA+TGG 0.468521 5:-8052013 MsG0580024679.01.T01:CDS
TGCTTGCCGCGCATATCAAA+TGG 0.468727 5:-8051634 MsG0580024679.01.T01:CDS
CGGGGAGGATTTGGGATGAG+CGG 0.472875 5:+8052161 None:intergenic
GTCAACGATGCTGACGTGGC+AGG 0.472987 5:+8052093 None:intergenic
GTGCATTGTGGCTCATTCAC+AGG 0.474620 5:-8050510 MsG0580024679.01.T01:CDS
TATGCTCAGCAGACAGATGC+TGG 0.480588 5:-8049743 MsG0580024679.01.T01:CDS
TTGGTGGTGGTGGAGAATGG+TGG 0.480612 5:-8051782 MsG0580024679.01.T01:CDS
GAGGTTGTGATTGGGGAAGG+TGG 0.480973 5:-8051692 MsG0580024679.01.T01:CDS
GAATGGTGTTATTGCTAAGA+GGG 0.481175 5:-8051996 MsG0580024679.01.T01:CDS
CTATCTCTAATGGAAGAATT+GGG 0.482001 5:+8049503 None:intergenic
CTGAATCAATGCCACGTGCT+TGG 0.483064 5:+8049582 None:intergenic
GATGATGAAGAAGAAGATGA+TGG 0.495014 5:+8052409 None:intergenic
TGTGATTGGGGAAGGTGGCA+AGG 0.496641 5:-8051687 MsG0580024679.01.T01:CDS
TTGCACGAGGTTCAAGAAGA+AGG 0.497992 5:+8049705 None:intergenic
TCAACGATGCTGACGTGGCA+GGG 0.499449 5:+8052094 None:intergenic
AATCTCTTCTCTCTTCTCCA+TGG 0.503098 5:-8052231 MsG0580024679.01.T01:CDS
AATGGGTGCACCGGATTTGA+CGG 0.505675 5:-8051918 MsG0580024679.01.T01:CDS
CGAAGACTGTGGAGAGGTTG+TGG 0.506329 5:+8052268 None:intergenic
TGCCACGTCAGCATCGTTGA+CGG 0.508578 5:-8052091 MsG0580024679.01.T01:CDS
AATTGTGATCATTTAGGAGA+TGG 0.509008 5:+8049449 None:intergenic
GGTCACTTATTGCAGCTCCA+TGG 0.511189 5:+8049630 None:intergenic
TCATATCAAACAACTAGGTC+CGG 0.512491 5:-8050645 MsG0580024679.01.T01:CDS
GATACATAACCCAAATGAAC+CGG 0.513043 5:+8051860 None:intergenic
GTCACTTATTGCAGCTCCAT+GGG 0.518219 5:+8049631 None:intergenic
TGCGTTGTTGAATGTGACTC+TGG 0.519290 5:+8052357 None:intergenic
TGTATCGTTGCAGAGTAGTA+AGG 0.522175 5:-8051843 MsG0580024679.01.T01:CDS
TCCGGCAATTGTAACAATTG+AGG 0.522631 5:-8049306 MsG0580024679.01.T01:three_prime_UTR
GGTCTACATCTCATGTTACT+TGG 0.530754 5:+8049125 None:intergenic
CAACTAGAAGTGCATGGTGA+TGG 0.532423 5:+8049277 None:intergenic
GACGTGGCAGGGGAATTGAT+CGG 0.533599 5:+8052105 None:intergenic
GTGCTTGGAAATACAGAAGT+TGG 0.533653 5:+8049597 None:intergenic
TTTGACGGTGGTTTATGTAC+CGG 0.541831 5:-8051903 MsG0580024679.01.T01:CDS
CTGTGGAGAGGTTGTGGTGT+AGG 0.543065 5:+8052274 None:intergenic
CAACGATGCTGACGTGGCAG+GGG 0.543308 5:+8052095 None:intergenic
TCAACTTTGCACTTGTCTGT+TGG 0.543785 5:-8050605 MsG0580024679.01.T01:CDS
ATCTATCACTTCCCCTCCAA+AGG 0.544296 5:+8049532 None:intergenic
GTCTTGTATTGGATCATCCA+AGG 0.548517 5:-8050556 MsG0580024679.01.T01:CDS
TGATTCAGAAACAGCTAGAA+GGG 0.550672 5:-8049567 MsG0580024679.01.T01:CDS
GGACTCGCAGTTGTGTATGT+AGG 0.554163 5:-8049199 MsG0580024679.01.T01:three_prime_UTR
GAGAGGTTGTGGTGTAGGGA+CGG 0.557143 5:+8052279 None:intergenic
GTTTCAACCTGAACACCCTC+CGG 0.557730 5:+8051884 None:intergenic
TCTTGTATTGGATCATCCAA+GGG 0.561446 5:-8050555 MsG0580024679.01.T01:CDS
TGTGGAGAGGTTGTGGTGTA+GGG 0.564194 5:+8052275 None:intergenic
GTGGCAGGGGAATTGATCGG+GGG 0.565438 5:+8052108 None:intergenic
GCACAGGAGGCAAACTTGGA+AGG 0.565571 5:-8050676 MsG0580024679.01.T01:CDS
ATCTGACGGGAATAACCCCT+TGG 0.566453 5:+8050539 None:intergenic
TGCATTGTGGCTCATTCACA+GGG 0.566881 5:-8050509 MsG0580024679.01.T01:CDS
GGAGAAGTCGTTGAAGCGAA+AGG 0.568994 5:+8052189 None:intergenic
CAATGCACTTATGAATCTGA+CGG 0.571017 5:+8050525 None:intergenic
ATATAGTTGAGGAGTTTGAA+GGG 0.571311 5:-8051751 MsG0580024679.01.T01:CDS
GGGTGTTCAGGTTGAAACTC+CGG 0.571357 5:-8051879 MsG0580024679.01.T01:CDS
CGTGGCAGGGGAATTGATCG+GGG 0.572596 5:+8052107 None:intergenic
GGAGGATTTGGGATGAGCGG+AGG 0.577123 5:+8052164 None:intergenic
ATGATGAAGAAGAAGATGAT+GGG 0.577329 5:+8052410 None:intergenic
GAGCTTACAGAAGTAAGCAC+AGG 0.578828 5:-8050692 MsG0580024679.01.T01:CDS
TCCACCACCACCAAAACCCT+CGG 0.581717 5:+8051791 None:intergenic
GAGAAGTCGTTGAAGCGAAA+GGG 0.582355 5:+8052190 None:intergenic
CAGCGAGGTCGAGAATGAAT+GGG 0.582930 5:+8052317 None:intergenic
AATGCACTTATGAATCTGAC+GGG 0.586814 5:+8050526 None:intergenic
ACAAAATGAAGTGTCTACTC+CGG 0.588350 5:-8049324 MsG0580024679.01.T01:three_prime_UTR
GGTGGTGGAGAATGGTGGTG+AGG 0.595224 5:-8051777 MsG0580024679.01.T01:CDS
GAATTGGTATCTGGATTGGA+CGG 0.597060 5:-8051968 MsG0580024679.01.T01:CDS
TGGAGCTGCAATAAGTGACC+TGG 0.598264 5:-8049627 MsG0580024679.01.T01:CDS
GACGGTGGTTTATGTACCGG+AGG 0.598657 5:-8051900 MsG0580024679.01.T01:CDS
GATTAATGGAATGGGTGCAC+CGG 0.603821 5:-8051927 MsG0580024679.01.T01:CDS
GACCGTCAACGATGCTGACG+TGG 0.604811 5:+8052089 None:intergenic
AGATGTATATATCGAATCCG+AGG 0.610367 5:-8051808 MsG0580024679.01.T01:CDS
CTTACAGAAGTAAGCACAGG+AGG 0.618684 5:-8050689 MsG0580024679.01.T01:CDS
AATCTTCATATCAAACAACT+AGG 0.623363 5:-8050650 MsG0580024679.01.T01:CDS
ATTATGGAGTTGAATGCTGC+GGG 0.626580 5:+8052433 None:intergenic
CTTCTGTATTTCCAAGCACG+TGG 0.628093 5:-8049593 MsG0580024679.01.T01:CDS
GATGACGTCAAGTGTTCCCA+TGG 0.629397 5:-8049647 MsG0580024679.01.T01:CDS
ACGGTGGTTTATGTACCGGA+GGG 0.631873 5:-8051899 MsG0580024679.01.T01:CDS
AAGAAGATTCTCGAAGACTG+TGG 0.639780 5:+8052257 None:intergenic
TAAATACAACTAGAAGTGCA+TGG 0.640373 5:+8049271 None:intergenic
GGGTGCACCGGATTTGACGG+TGG 0.641084 5:-8051915 MsG0580024679.01.T01:CDS
GTCTGTTGGTAATCAAACAC+AGG 0.643557 5:-8050591 MsG0580024679.01.T01:CDS
AGAAGTCCATTTGATATGCG+CGG 0.652340 5:+8051628 None:intergenic
TCGTTGCAGAGTAGTAAGGA+AGG 0.655313 5:-8051839 MsG0580024679.01.T01:CDS
GATGTATATATCGAATCCGA+GGG 0.671373 5:-8051807 MsG0580024679.01.T01:CDS
TCAGATTCATAAGTGCATTG+TGG 0.677608 5:-8050522 MsG0580024679.01.T01:CDS
GATTCTCGAAGACTGTGGAG+AGG 0.677831 5:+8052262 None:intergenic
TGGTGAGGTTGATATAGTTG+AGG 0.690189 5:-8051762 MsG0580024679.01.T01:CDS
CTTGTATTGGATCATCCAAG+GGG 0.694144 5:-8050554 MsG0580024679.01.T01:CDS
TTGGTATCTGGATTGGACGG+TGG 0.694952 5:-8051965 MsG0580024679.01.T01:CDS
TTAACATTTACAGTTGCACG+AGG 0.704403 5:+8049692 None:intergenic
GATTATGGAGTTGAATGCTG+CGG 0.713690 5:+8052432 None:intergenic
AGTCTTCTAAGGTTTCAGCG+AGG 0.795490 5:+8052302 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAGTTGTTATAGATTATAA+AGG + Chr5:8050554-8050573 None:intergenic 15.0%
!! ATTACTAACAAAATTAACAT+TGG + Chr5:8051408-8051427 None:intergenic 15.0%
!! TAAACATATATACAATTGTA+AGG + Chr5:8051273-8051292 None:intergenic 15.0%
!! TACAATTGTATATATGTTTA+CGG - Chr5:8051273-8051292 MsG0580024679.01.T01:intron 15.0%
!!! AGTTGTATTTATGTATTTTT+TGG - Chr5:8052332-8052351 MsG0580024679.01.T01:CDS 15.0%
!!! ATTTTTTTATTTATTGAGCT+AGG - Chr5:8051745-8051764 MsG0580024679.01.T01:CDS 15.0%
!! AAGTCAGATTAAAAGTTTAT+TGG - Chr5:8052117-8052136 MsG0580024679.01.T01:CDS 20.0%
!! AAGTCATTAGATTATATTGT+GGG + Chr5:8051696-8051715 None:intergenic 20.0%
!! GAGTATGAATTTATTGTTTA+TGG - Chr5:8050133-8050152 MsG0580024679.01.T01:intron 20.0%
!! GTGAGTAAAAAAACAATAAT+AGG - Chr5:8052371-8052390 MsG0580024679.01.T01:CDS 20.0%
!! TAAGTCATTAGATTATATTG+TGG + Chr5:8051697-8051716 None:intergenic 20.0%
!! TAGAAAAAATTTGACATGAT+TGG - Chr5:8050834-8050853 MsG0580024679.01.T01:intron 20.0%
!! TTATTGTTTATGGAATGAAA+AGG - Chr5:8050143-8050162 MsG0580024679.01.T01:intron 20.0%
!!! AAAAATATTGTTTCTTGTCA+TGG - Chr5:8052228-8052247 MsG0580024679.01.T01:CDS 20.0%
!!! AGCTTGATAAAAGTATAAAT+TGG - Chr5:8052198-8052217 MsG0580024679.01.T01:CDS 20.0%
!!! TTTTGGAAAATAAATTTGTC+AGG - Chr5:8052349-8052368 MsG0580024679.01.T01:CDS 20.0%
! AATCTTCATATCAAACAACT+AGG - Chr5:8050941-8050960 MsG0580024679.01.T01:intron 25.0%
! ACAATCAACTTCAAAATTCT+CGG - Chr5:8049532-8049551 MsG0580024679.01.T01:CDS 25.0%
! AGTCATTAGATTATATTGTG+GGG + Chr5:8051695-8051714 None:intergenic 25.0%
! AGTGTATTACTGATATAAAG+TGG + Chr5:8051815-8051834 None:intergenic 25.0%
! ATTGTTAGCATTAATTATGC+TGG - Chr5:8051426-8051445 MsG0580024679.01.T01:intron 25.0%
! GTTAGAAACTAATCGAAAAT+TGG + Chr5:8051186-8051205 None:intergenic 25.0%
! TAATGGCTAACTATATACAA+AGG - Chr5:8050653-8050672 MsG0580024679.01.T01:CDS 25.0%
! TATGCAATTCTTAGTGTTAT+AGG - Chr5:8050284-8050303 MsG0580024679.01.T01:intron 25.0%
! TATGTTGGAATAGTAAAACT+GGG - Chr5:8050167-8050186 MsG0580024679.01.T01:intron 25.0%
! TATGTTTACGGAGAAATTAA+CGG - Chr5:8051285-8051304 MsG0580024679.01.T01:intron 25.0%
! TTAGTGCAAAAATGTTCTTA+TGG - Chr5:8050613-8050632 MsG0580024679.01.T01:CDS 25.0%
! TTATGTTGGAATAGTAAAAC+TGG - Chr5:8050166-8050185 MsG0580024679.01.T01:intron 25.0%
! TTCCTACATAAATGACTAAA+AGG + Chr5:8051561-8051580 None:intergenic 25.0%
! TTGTTAGCATTAATTATGCT+GGG - Chr5:8051427-8051446 MsG0580024679.01.T01:intron 25.0%
!! ACACTTCATTTTGTAGAAAT+TGG + Chr5:8052261-8052280 None:intergenic 25.0%
!! GCAATTTATCTTTTAGTATC+TGG - Chr5:8050470-8050489 MsG0580024679.01.T01:intron 25.0%
!! GGTAATTTGTCAAAATTGAA+TGG - Chr5:8049578-8049597 MsG0580024679.01.T01:CDS 25.0%
!! GTAATACACTATTCTTGTTT+AGG - Chr5:8051825-8051844 MsG0580024679.01.T01:CDS 25.0%
!! GTTGTTTGTTACAAAACAAT+CGG + Chr5:8050746-8050765 None:intergenic 25.0%
!! TACAATAACAAGGGTATATA+AGG + Chr5:8051523-8051542 None:intergenic 25.0%
!!! GATTTATTTTGGTCGATTAA+TGG - Chr5:8049650-8049669 MsG0580024679.01.T01:CDS 25.0%
AAATTGCAAGTGATTCCATT+AGG + Chr5:8050457-8050476 None:intergenic 30.0%
AATAGTAAAACTGGGTCTAA+AGG - Chr5:8050175-8050194 MsG0580024679.01.T01:intron 30.0%
AATTGTGATCATTTAGGAGA+TGG + Chr5:8052145-8052164 None:intergenic 30.0%
ACCTACAATTGTGATCATTT+AGG + Chr5:8052151-8052170 None:intergenic 30.0%
ACTCAACAAAAAACAATGAG+TGG - Chr5:8049122-8049141 MsG0580024679.01.T01:three_prime_UTR 30.0%
ATATAGTTGAGGAGTTTGAA+GGG - Chr5:8049840-8049859 MsG0580024679.01.T01:intron 30.0%
ATGATGAAGAAGAAGATGAT+GGG + Chr5:8049184-8049203 None:intergenic 30.0%
ATGGAATGAAAAGGTTATGT+TGG - Chr5:8050152-8050171 MsG0580024679.01.T01:intron 30.0%
CACACGAAATGCAAAAATAA+AGG + Chr5:8050723-8050742 None:intergenic 30.0%
CTATCTCTAATGGAAGAATT+GGG + Chr5:8052091-8052110 None:intergenic 30.0%
GCTAACTATATACAAAGGAA+GGG - Chr5:8050658-8050677 MsG0580024679.01.T01:CDS 30.0%
GGATATACGTACAATAACAA+GGG + Chr5:8051532-8051551 None:intergenic 30.0%
GTGTTATAGGTATAATGTTG+CGG - Chr5:8050297-8050316 MsG0580024679.01.T01:intron 30.0%
GTTATCAAAGAAGTAGTCAT+AGG + Chr5:8050237-8050256 None:intergenic 30.0%
TAAATGACTAAAAGGCAGTT+TGG + Chr5:8051553-8051572 None:intergenic 30.0%
TACAATTGTAAGGACTTCTT+CGG + Chr5:8051263-8051282 None:intergenic 30.0%
TCCTAAATGATCACAATTGT+AGG - Chr5:8052147-8052166 MsG0580024679.01.T01:CDS 30.0%
TCTATCTCTAATGGAAGAAT+TGG + Chr5:8052092-8052111 None:intergenic 30.0%
TGGATATACGTACAATAACA+AGG + Chr5:8051533-8051552 None:intergenic 30.0%
TGTGATTGTTGAACATTTAC+AGG - Chr5:8050859-8050878 MsG0580024679.01.T01:intron 30.0%
TTTATTTATTGAGCTAGGAC+AGG - Chr5:8051750-8051769 MsG0580024679.01.T01:CDS 30.0%
! AACAATACAAGAGTGGATTT+AGG - Chr5:8051160-8051179 MsG0580024679.01.T01:intron 30.0%
! AAGGGTATATAAGGTTTGTT+TGG + Chr5:8051514-8051533 None:intergenic 30.0%
! ACTTTTGACGAAGAAGATAA+TGG - Chr5:8050636-8050655 MsG0580024679.01.T01:CDS 30.0%
! GGAATGATAATGAGTGTTAT+TGG - Chr5:8049861-8049880 MsG0580024679.01.T01:intron 30.0%
! GTGCTTTTATGTATCAAGAA+TGG - Chr5:8051582-8051601 MsG0580024679.01.T01:intron 30.0%
! TAAATACAACTAGAAGTGCA+TGG + Chr5:8052323-8052342 None:intergenic 30.0%
! TGCCTTTTAGTCATTTATGT+AGG - Chr5:8051556-8051575 MsG0580024679.01.T01:intron 30.0%
! TTCTAATTTTTGCCTTTGGA+GGG - Chr5:8052047-8052066 MsG0580024679.01.T01:CDS 30.0%
! TTTTGGTCGATTAATGGAAT+GGG - Chr5:8049656-8049675 MsG0580024679.01.T01:CDS 30.0%
!! ACTACTTCTTTGATAACGAA+GGG - Chr5:8050240-8050259 MsG0580024679.01.T01:intron 30.0%
!! ATTTTGGTCGATTAATGGAA+TGG - Chr5:8049655-8049674 MsG0580024679.01.T01:CDS 30.0%
!! TTATTGGAGTAATGCTGTTT+TGG - Chr5:8049877-8049896 MsG0580024679.01.T01:intron 30.0%
AATGCACTTATGAATCTGAC+GGG + Chr5:8051068-8051087 None:intergenic 35.0%
ACTTCGTACTCTATCTCTAA+TGG + Chr5:8052101-8052120 None:intergenic 35.0%
AGATGTATATATCGAATCCG+AGG - Chr5:8049783-8049802 MsG0580024679.01.T01:intron 35.0%
CAATGCACTTATGAATCTGA+CGG + Chr5:8051069-8051088 None:intergenic 35.0%
CTTCTTCGGTTCTTCATAAA+TGG + Chr5:8051249-8051268 None:intergenic 35.0%
GATACATAACCCAAATGAAC+CGG + Chr5:8049734-8049753 None:intergenic 35.0%
GATATAGTTGAGGAGTTTGA+AGG - Chr5:8049839-8049858 MsG0580024679.01.T01:intron 35.0%
GATGATGAAGAAGAAGATGA+TGG + Chr5:8049185-8049204 None:intergenic 35.0%
GATGTATATATCGAATCCGA+GGG - Chr5:8049784-8049803 MsG0580024679.01.T01:intron 35.0%
GGCTAACTATATACAAAGGA+AGG - Chr5:8050657-8050676 MsG0580024679.01.T01:CDS 35.0%
TAATTTCACCTGTCTTGCTA+TGG - Chr5:8051341-8051360 MsG0580024679.01.T01:intron 35.0%
TCAGATTCATAAGTGCATTG+TGG - Chr5:8051069-8051088 MsG0580024679.01.T01:intron 35.0%
TCATATCAAACAACTAGGTC+CGG - Chr5:8050946-8050965 MsG0580024679.01.T01:intron 35.0%
TCTTGTATTGGATCATCCAA+GGG - Chr5:8051036-8051055 MsG0580024679.01.T01:intron 35.0%
TGATTCAGAAACAGCTAGAA+GGG - Chr5:8052024-8052043 MsG0580024679.01.T01:CDS 35.0%
TTAACATTTACAGTTGCACG+AGG + Chr5:8051902-8051921 None:intergenic 35.0%
TTAGTATCTGGTAGAAGTAG+TGG - Chr5:8050482-8050501 MsG0580024679.01.T01:CDS 35.0%
TTGATTCAGAAACAGCTAGA+AGG - Chr5:8052023-8052042 MsG0580024679.01.T01:CDS 35.0%
TTTGCACAACAATACAAGAG+TGG - Chr5:8051153-8051172 MsG0580024679.01.T01:intron 35.0%
! AAATTCTCGGAGTTTTCAGA+TGG - Chr5:8049545-8049564 MsG0580024679.01.T01:CDS 35.0%
! AATTCTCGGAGTTTTCAGAT+GGG - Chr5:8049546-8049565 MsG0580024679.01.T01:CDS 35.0%
! ACAAAATGAAGTGTCTACTC+CGG - Chr5:8052267-8052286 MsG0580024679.01.T01:CDS 35.0%
! AGTGGCATCATTTTGTCATT+AGG - Chr5:8050500-8050519 MsG0580024679.01.T01:CDS 35.0%
! AGTTTTTGACGGAAACGTTA+AGG - Chr5:8051111-8051130 MsG0580024679.01.T01:intron 35.0%
! ATAAGGTTTGTTTGGTGGTT+GGG + Chr5:8051506-8051525 None:intergenic 35.0%
! GGTATATAAGGTTTGTTTGG+TGG + Chr5:8051511-8051530 None:intergenic 35.0%
! GTTCTAATTTTTGCCTTTGG+AGG - Chr5:8052046-8052065 MsG0580024679.01.T01:CDS 35.0%
! TATAAGGTTTGTTTGGTGGT+TGG + Chr5:8051507-8051526 None:intergenic 35.0%
! TCAGCAATGATTTGGAGATT+TGG + Chr5:8051926-8051945 None:intergenic 35.0%
! TGTTATTGCTAAGAGGGTTT+TGG - Chr5:8049601-8049620 MsG0580024679.01.T01:CDS 35.0%
! TTTGGAATTGGTATCTGGAT+TGG - Chr5:8049619-8049638 MsG0580024679.01.T01:CDS 35.0%
!! AGAAGAAGATGATGGGATTA+TGG + Chr5:8049177-8049196 None:intergenic 35.0%
!! AGGGTTCTAATTTTTGCCTT+TGG - Chr5:8052043-8052062 MsG0580024679.01.T01:CDS 35.0%
!! CTACTTCTTTGATAACGAAG+GGG - Chr5:8050241-8050260 MsG0580024679.01.T01:intron 35.0%
!! GAATGGTGTTATTGCTAAGA+GGG - Chr5:8049595-8049614 MsG0580024679.01.T01:CDS 35.0%
!! GACTACTTCTTTGATAACGA+AGG - Chr5:8050239-8050258 MsG0580024679.01.T01:intron 35.0%
!! TCTAATTTTTGCCTTTGGAG+GGG - Chr5:8052048-8052067 MsG0580024679.01.T01:CDS 35.0%
!! TCTTCACAGTAGTCTTGTAT+TGG - Chr5:8051024-8051043 MsG0580024679.01.T01:intron 35.0%
!! TGAATGGTGTTATTGCTAAG+AGG - Chr5:8049594-8049613 MsG0580024679.01.T01:CDS 35.0%
!! TTTTGAGAAGTTACGCAAGA+GGG - Chr5:8050805-8050824 MsG0580024679.01.T01:intron 35.0%
!! TTTTTGAGAAGTTACGCAAG+AGG - Chr5:8050804-8050823 MsG0580024679.01.T01:intron 35.0%
AAAGGAAGGGCAATCTAGTT+AGG - Chr5:8050671-8050690 MsG0580024679.01.T01:CDS 40.0%
AAGAAGATTCTCGAAGACTG+TGG + Chr5:8049337-8049356 None:intergenic 40.0%
AAGGGCAATCTAGTTAGGAT+AGG - Chr5:8050676-8050695 MsG0580024679.01.T01:CDS 40.0%
AATCTCTTCTCTCTTCTCCA+TGG - Chr5:8049360-8049379 MsG0580024679.01.T01:three_prime_UTR 40.0%
ACATAAACCACCGTCAAATC+CGG + Chr5:8049686-8049705 None:intergenic 40.0%
ACGGAAACGTTAAGGTTAAC+AGG - Chr5:8051119-8051138 MsG0580024679.01.T01:intron 40.0%
AGAAGTCCATTTGATATGCG+CGG + Chr5:8049966-8049985 None:intergenic 40.0%
AGCTCATATTCACCGATAAG+TGG + Chr5:8050410-8050429 None:intergenic 40.0%
ATTATGGAGTTGAATGCTGC+GGG + Chr5:8049161-8049180 None:intergenic 40.0%
ATTTATTGAGCTAGGACAGG+TGG - Chr5:8051753-8051772 MsG0580024679.01.T01:CDS 40.0%
CTTGTATTGGATCATCCAAG+GGG - Chr5:8051037-8051056 MsG0580024679.01.T01:intron 40.0%
GATTATGGAGTTGAATGCTG+CGG + Chr5:8049162-8049181 None:intergenic 40.0%
GCATTAATTATGCTGGGAGT+AGG - Chr5:8051433-8051452 MsG0580024679.01.T01:intron 40.0%
GCCTCAATTGTTACAATTGC+CGG + Chr5:8052289-8052308 None:intergenic 40.0%
GCTCATATTCACCGATAAGT+GGG + Chr5:8050409-8050428 None:intergenic 40.0%
GGTCTACATCTCATGTTACT+TGG + Chr5:8052469-8052488 None:intergenic 40.0%
GTATCAATCCATAGCAAGAC+AGG + Chr5:8051352-8051371 None:intergenic 40.0%
GTCTTGTATTGGATCATCCA+AGG - Chr5:8051035-8051054 MsG0580024679.01.T01:intron 40.0%
GTGCTTGGAAATACAGAAGT+TGG + Chr5:8051997-8052016 None:intergenic 40.0%
GTTGAAACTCCGGTTCATTT+GGG - Chr5:8049722-8049741 MsG0580024679.01.T01:CDS 40.0%
TCAACTTTGCACTTGTCTGT+TGG - Chr5:8050986-8051005 MsG0580024679.01.T01:intron 40.0%
TCCGGCAATTGTAACAATTG+AGG - Chr5:8052285-8052304 MsG0580024679.01.T01:CDS 40.0%
TGACGTCATCAGCAATGATT+TGG + Chr5:8051934-8051953 None:intergenic 40.0%
TGTATCGTTGCAGAGTAGTA+AGG - Chr5:8049748-8049767 MsG0580024679.01.T01:intron 40.0%
TTTGACGGTGGTTTATGTAC+CGG - Chr5:8049688-8049707 MsG0580024679.01.T01:CDS 40.0%
TTTGAGAAGTTACGCAAGAG+GGG - Chr5:8050806-8050825 MsG0580024679.01.T01:intron 40.0%
! AGTAGAGCTAAAAGCACAAC+GGG + Chr5:8050362-8050381 None:intergenic 40.0%
! AGTTAAAGAGTGGAGTGCTA+AGG + Chr5:8051476-8051495 None:intergenic 40.0%
! ATTCTCGGAGTTTTCAGATG+GGG - Chr5:8049547-8049566 MsG0580024679.01.T01:CDS 40.0%
! GAATTGGTATCTGGATTGGA+CGG - Chr5:8049623-8049642 MsG0580024679.01.T01:CDS 40.0%
! GAGTAGAGCTAAAAGCACAA+CGG + Chr5:8050363-8050382 None:intergenic 40.0%
! TAAGGTTTGTTTGGTGGTTG+GGG + Chr5:8051505-8051524 None:intergenic 40.0%
! TATATCGAATCCGAGGGTTT+TGG - Chr5:8049790-8049809 MsG0580024679.01.T01:intron 40.0%
! TGGACGGTGGAGATTTATTT+TGG - Chr5:8049639-8049658 MsG0580024679.01.T01:CDS 40.0%
! TGTGTTTCTGATGCTGATTG+AGG - Chr5:8051661-8051680 MsG0580024679.01.T01:CDS 40.0%
! TTTTCAGATGGGGTTTACGT+TGG - Chr5:8049557-8049576 MsG0580024679.01.T01:CDS 40.0%
!! GTCTGTTGGTAATCAAACAC+AGG - Chr5:8051000-8051019 MsG0580024679.01.T01:intron 40.0%
!! GTTGAATGTGACTCTGGTTT+TGG + Chr5:8049231-8049250 None:intergenic 40.0%
!! TGGTGAGGTTGATATAGTTG+AGG - Chr5:8049829-8049848 MsG0580024679.01.T01:intron 40.0%
!!! AGGGTTTTGGAATTGGTATC+TGG - Chr5:8049614-8049633 MsG0580024679.01.T01:CDS 40.0%
!!! CTGTTTTGGAGGTTGTGATT+GGG - Chr5:8049891-8049910 MsG0580024679.01.T01:intron 40.0%
!!! TGCTAAGAGGGTTTTGGAAT+TGG - Chr5:8049607-8049626 MsG0580024679.01.T01:CDS 40.0%
!!! TGTTTTGGAGGTTGTGATTG+GGG - Chr5:8049892-8049911 MsG0580024679.01.T01:intron 40.0%
!!! TTGGAGTAATGCTGTTTTGG+AGG - Chr5:8049880-8049899 MsG0580024679.01.T01:intron 40.0%
ATCTATCACTTCCCCTCCAA+AGG + Chr5:8052062-8052081 None:intergenic 45.0%
CAAGTGATTCCATTAGGTCC+AGG + Chr5:8050451-8050470 None:intergenic 45.0%
CTTACAGAAGTAAGCACAGG+AGG - Chr5:8050902-8050921 MsG0580024679.01.T01:intron 45.0%
CTTCTGTATTTCCAAGCACG+TGG - Chr5:8051998-8052017 MsG0580024679.01.T01:CDS 45.0%
GAGAAGTCGTTGAAGCGAAA+GGG + Chr5:8049404-8049423 None:intergenic 45.0%
GAGCTTACAGAAGTAAGCAC+AGG - Chr5:8050899-8050918 MsG0580024679.01.T01:intron 45.0%
GATAACTCTGTCACTGTGTC+CGG + Chr5:8050968-8050987 None:intergenic 45.0%
GATTAATGGAATGGGTGCAC+CGG - Chr5:8049664-8049683 MsG0580024679.01.T01:CDS 45.0%
GGTTGAAACTCCGGTTCATT+TGG - Chr5:8049721-8049740 MsG0580024679.01.T01:CDS 45.0%
GTCACTTATTGCAGCTCCAT+GGG + Chr5:8051963-8051982 None:intergenic 45.0%
TCGTTGCAGAGTAGTAAGGA+AGG - Chr5:8049752-8049771 MsG0580024679.01.T01:intron 45.0%
TGCATTGTGGCTCATTCACA+GGG - Chr5:8051082-8051101 MsG0580024679.01.T01:intron 45.0%
TGCGTTGTTGAATGTGACTC+TGG + Chr5:8049237-8049256 None:intergenic 45.0%
TTGCACGAGGTTCAAGAAGA+AGG + Chr5:8051889-8051908 None:intergenic 45.0%
! AAAAGCACAACGGGCATAGT+GGG + Chr5:8050353-8050372 None:intergenic 45.0%
! CAAATGGACTTCTGTTCGTC+AGG - Chr5:8049973-8049992 MsG0580024679.01.T01:intron 45.0%
! CAACTAGAAGTGCATGGTGA+TGG + Chr5:8052317-8052336 None:intergenic 45.0%
! CAGGGACAAGCAGTTTTTGA+CGG - Chr5:8051100-8051119 MsG0580024679.01.T01:intron 45.0%
! TAAAAGCACAACGGGCATAG+TGG + Chr5:8050354-8050373 None:intergenic 45.0%
! TAAAGAGTGGAGTGCTAAGG+AGG + Chr5:8051473-8051492 None:intergenic 45.0%
!! AAGGGTTCGTGTTTTCGAGA+AGG + Chr5:8049386-8049405 None:intergenic 45.0%
!! ACAGAAGTTGGCTTTGTTCC+AGG + Chr5:8051985-8052004 None:intergenic 45.0%
!! AGTCTTCTAAGGTTTCAGCG+AGG + Chr5:8049292-8049311 None:intergenic 45.0%
!!! GCTGTTTTGGAGGTTGTGAT+TGG - Chr5:8049890-8049909 MsG0580024679.01.T01:intron 45.0%
AAAGCACAACGGGCATAGTG+GGG + Chr5:8050352-8050371 None:intergenic 50.0%
AATCGCTCGTGCATAGCAGA+GGG + Chr5:8050385-8050404 None:intergenic 50.0%
AATGGGTGCACCGGATTTGA+CGG - Chr5:8049673-8049692 MsG0580024679.01.T01:CDS 50.0%
ACGAGCGATTGCCCACTTAT+CGG - Chr5:8050395-8050414 MsG0580024679.01.T01:intron 50.0%
ACGGTGGTTTATGTACCGGA+GGG - Chr5:8049692-8049711 MsG0580024679.01.T01:CDS 50.0%
ATCTGACGGGAATAACCCCT+TGG + Chr5:8051055-8051074 None:intergenic 50.0%
CAGCGAGGTCGAGAATGAAT+GGG + Chr5:8049277-8049296 None:intergenic 50.0%
CAGTCACTACCTGGACCTAA+TGG - Chr5:8050439-8050458 MsG0580024679.01.T01:intron 50.0%
CATTAGGTCCAGGTAGTGAC+TGG + Chr5:8050441-8050460 None:intergenic 50.0%
CTGAATCAATGCCACGTGCT+TGG + Chr5:8052012-8052031 None:intergenic 50.0%
GATGACGTCAAGTGTTCCCA+TGG - Chr5:8051944-8051963 MsG0580024679.01.T01:CDS 50.0%
GATTCTCGAAGACTGTGGAG+AGG + Chr5:8049332-8049351 None:intergenic 50.0%
GGACTCGCAGTTGTGTATGT+AGG - Chr5:8052392-8052411 MsG0580024679.01.T01:CDS 50.0%
GGAGAAGTCGTTGAAGCGAA+AGG + Chr5:8049405-8049424 None:intergenic 50.0%
GGTCACTTATTGCAGCTCCA+TGG + Chr5:8051964-8051983 None:intergenic 50.0%
GTAAGCACAGGAGGCAAACT+TGG - Chr5:8050911-8050930 MsG0580024679.01.T01:intron 50.0%
GTACACAACCAGTCACTACC+TGG - Chr5:8050430-8050449 MsG0580024679.01.T01:intron 50.0%
GTGCATTGTGGCTCATTCAC+AGG - Chr5:8051081-8051100 MsG0580024679.01.T01:intron 50.0%
GTTTCAACCTGAACACCCTC+CGG + Chr5:8049710-8049729 None:intergenic 50.0%
TATGCTCAGCAGACAGATGC+TGG - Chr5:8051848-8051867 MsG0580024679.01.T01:CDS 50.0%
TCAGCGAGGTCGAGAATGAA+TGG + Chr5:8049278-8049297 None:intergenic 50.0%
TGCTTGCCGCGCATATCAAA+TGG - Chr5:8049957-8049976 MsG0580024679.01.T01:intron 50.0%
TGGAGCTGCAATAAGTGACC+TGG - Chr5:8051964-8051983 MsG0580024679.01.T01:CDS 50.0%
TGTAGGGACGGAGTCTTCTA+AGG + Chr5:8049303-8049322 None:intergenic 50.0%
TGTGGAGAGGTTGTGGTGTA+GGG + Chr5:8049319-8049338 None:intergenic 50.0%
TTGGAGGTTGTGATTGGGGA+AGG - Chr5:8049896-8049915 MsG0580024679.01.T01:intron 50.0%
! AGTGGAGTGCTAAGGAGGTT+GGG + Chr5:8051468-8051487 None:intergenic 50.0%
! GTTTGTTTGGTGGTTGGGGT+GGG + Chr5:8051501-8051520 None:intergenic 50.0%
! TTGGTATCTGGATTGGACGG+TGG - Chr5:8049626-8049645 MsG0580024679.01.T01:CDS 50.0%
! TTTGTTTGGTGGTTGGGGTG+GGG + Chr5:8051500-8051519 None:intergenic 50.0%
!! ATCGAATCCGAGGGTTTTGG+TGG - Chr5:8049793-8049812 MsG0580024679.01.T01:intron 50.0%
!! GGGTGTTCAGGTTGAAACTC+CGG - Chr5:8049712-8049731 MsG0580024679.01.T01:CDS 50.0%
!! TCGTGTTTTCGAGAAGGCCA+TGG + Chr5:8049380-8049399 None:intergenic 50.0%
!! TTATGTACCGGAGGGTGTTC+AGG - Chr5:8049700-8049719 MsG0580024679.01.T01:CDS 50.0%
!!! GTTTTGGTGGTGGTGGAGAA+TGG - Chr5:8049806-8049825 MsG0580024679.01.T01:intron 50.0%
ACGTGGCAGGGGAATTGATC+GGG + Chr5:8049488-8049507 None:intergenic 55.0%
CAATCGCTCGTGCATAGCAG+AGG + Chr5:8050386-8050405 None:intergenic 55.0%
CGAAGACTGTGGAGAGGTTG+TGG + Chr5:8049326-8049345 None:intergenic 55.0%
CTGTGGAGAGGTTGTGGTGT+AGG + Chr5:8049320-8049339 None:intergenic 55.0%
GACGGTGGTTTATGTACCGG+AGG - Chr5:8049691-8049710 MsG0580024679.01.T01:CDS 55.0%
GACGTGGCAGGGGAATTGAT+CGG + Chr5:8049489-8049508 None:intergenic 55.0%
GAGAGGTTGTGGTGTAGGGA+CGG + Chr5:8049315-8049334 None:intergenic 55.0%
GAGGTTGTGATTGGGGAAGG+TGG - Chr5:8049899-8049918 MsG0580024679.01.T01:intron 55.0%
GCACAGGAGGCAAACTTGGA+AGG - Chr5:8050915-8050934 MsG0580024679.01.T01:intron 55.0%
GGGGTGGGGAAGTTAAAGAG+TGG + Chr5:8051486-8051505 None:intergenic 55.0%
TCAACGATGCTGACGTGGCA+GGG + Chr5:8049500-8049519 None:intergenic 55.0%
TCCACCACCACCAAAACCCT+CGG + Chr5:8049803-8049822 None:intergenic 55.0%
TGCCACGTCAGCATCGTTGA+CGG - Chr5:8049500-8049519 MsG0580024679.01.T01:CDS 55.0%
TGTGATTGGGGAAGGTGGCA+AGG - Chr5:8049904-8049923 MsG0580024679.01.T01:intron 55.0%
! GAGTGGAGTGCTAAGGAGGT+TGG + Chr5:8051469-8051488 None:intergenic 55.0%
! GATTTGGGATGAGCGGAGGA+AGG + Chr5:8049426-8049445 None:intergenic 55.0%
! GGTTTGTTTGGTGGTTGGGG+TGG + Chr5:8051502-8051521 None:intergenic 55.0%
!! GAATCCGAGGGTTTTGGTGG+TGG - Chr5:8049796-8049815 MsG0580024679.01.T01:intron 55.0%
!! TGGTGGTGGTGGTTGGGATT+GGG + Chr5:8049457-8049476 None:intergenic 55.0%
!! TTGGTGGTGGTGGAGAATGG+TGG - Chr5:8049809-8049828 MsG0580024679.01.T01:intron 55.0%
CAACGATGCTGACGTGGCAG+GGG + Chr5:8049499-8049518 None:intergenic 60.0%
CGTGGCAGGGGAATTGATCG+GGG + Chr5:8049487-8049506 None:intergenic 60.0%
GACCGTCAACGATGCTGACG+TGG + Chr5:8049505-8049524 None:intergenic 60.0%
GATTGGGGCGGGGAGGATTT+GGG + Chr5:8049441-8049460 None:intergenic 60.0%
GTCAACGATGCTGACGTGGC+AGG + Chr5:8049501-8049520 None:intergenic 60.0%
GTGGCAGGGGAATTGATCGG+GGG + Chr5:8049486-8049505 None:intergenic 60.0%
! CGGGGAGGATTTGGGATGAG+CGG + Chr5:8049433-8049452 None:intergenic 60.0%
! GGAGGATTTGGGATGAGCGG+AGG + Chr5:8049430-8049449 None:intergenic 60.0%
!! GGTGGTGGAGAATGGTGGTG+AGG - Chr5:8049814-8049833 MsG0580024679.01.T01:intron 60.0%
!! GGTGGTGGTGGTTGGGATTG+GGG + Chr5:8049456-8049475 None:intergenic 60.0%
!! GTGGTGGTGGTGGTTGGGAT+TGG + Chr5:8049458-8049477 None:intergenic 60.0%
!!! TCCGAGGGTTTTGGTGGTGG+TGG - Chr5:8049799-8049818 MsG0580024679.01.T01:intron 60.0%
GAATTGATCGGGGGCGGTGG+TGG + Chr5:8049477-8049496 None:intergenic 65.0%
GCAGGGGAATTGATCGGGGG+CGG + Chr5:8049483-8049502 None:intergenic 65.0%
GGATTGGGGCGGGGAGGATT+TGG + Chr5:8049442-8049461 None:intergenic 65.0%
GGGTGCACCGGATTTGACGG+TGG - Chr5:8049676-8049695 MsG0580024679.01.T01:CDS 65.0%
GTGGTGGTTGGGATTGGGGC+GGG + Chr5:8049452-8049471 None:intergenic 65.0%
TGGTGGTTGGGATTGGGGCG+GGG + Chr5:8049451-8049470 None:intergenic 65.0%
! GGTGGTGGTTGGGATTGGGG+CGG + Chr5:8049453-8049472 None:intergenic 65.0%
!! CGGTGGTGGTGGTGGTGGTT+GGG + Chr5:8049463-8049482 None:intergenic 65.0%
GGGGAATTGATCGGGGGCGG+TGG + Chr5:8049480-8049499 None:intergenic 70.0%
TGGTTGGGATTGGGGCGGGG+AGG + Chr5:8049448-8049467 None:intergenic 70.0%
! TTGATCGGGGGCGGTGGTGG+TGG + Chr5:8049474-8049493 None:intergenic 70.0%
!! GCGGTGGTGGTGGTGGTGGT+TGG + Chr5:8049464-8049483 None:intergenic 70.0%
!! ATCGGGGGCGGTGGTGGTGG+TGG + Chr5:8049471-8049490 None:intergenic 75.0%
!!! GGGGGCGGTGGTGGTGGTGG+TGG + Chr5:8049468-8049487 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
Chr5 gene 8049120 8052493 8049120 ID=MsG0580024679.01;Name=MsG0580024679.01
Chr5 mRNA 8049120 8052493 8049120 ID=MsG0580024679.01.T01;Parent=MsG0580024679.01;Name=MsG0580024679.01.T01;_AED=0.24;_eAED=0.24;_QI=17|1|1|1|1|1|3|337|475
Chr5 exon 8049120 8049766 8049120 ID=MsG0580024679.01.T01:exon:283;Parent=MsG0580024679.01.T01
Chr5 exon 8050473 8050732 8050473 ID=MsG0580024679.01.T01:exon:282;Parent=MsG0580024679.01.T01
Chr5 exon 8051619 8052493 8051619 ID=MsG0580024679.01.T01:exon:281;Parent=MsG0580024679.01.T01
Chr5 five_prime_UTR 8052477 8052493 8052477 ID=MsG0580024679.01.T01:five_prime_utr;Parent=MsG0580024679.01.T01
Chr5 CDS 8051619 8052476 8051619 ID=MsG0580024679.01.T01:cds;Parent=MsG0580024679.01.T01
Chr5 CDS 8050473 8050732 8050473 ID=MsG0580024679.01.T01:cds;Parent=MsG0580024679.01.T01
Chr5 CDS 8049457 8049766 8049457 ID=MsG0580024679.01.T01:cds;Parent=MsG0580024679.01.T01
Chr5 three_prime_UTR 8049120 8049456 8049120 ID=MsG0580024679.01.T01:three_prime_utr;Parent=MsG0580024679.01.T01
Gene Sequence

>MsG0580024679.01.T01

ATGAGTGGCATAGCATTAACACCCGCAGCATTCAACTCCATAATCCCATCATCTTCTTCTTCATCATCGAAATCTCAAAAACTCATCAGAACCAAAACCAGAGTCACATTCAACAACGCAATTTCAATCTCTTCAGACCCATTCATTCTCGACCTCGCTGAAACCTTAGAAGACTCCGTCCCTACACCACAACCTCTCCACAGTCTTCGAGAATCTTCTTCTCAATCTCTTCTCTCTTCTCCATGGCCTTCTCGAAAACACGAACCCTTTCGCTTCAACGACTTCTCCTTCCTCCGCTCATCCCAAATCCTCCCCGCCCCAATCCCAACCACCACCACCACCACCGCCCCCGATCAATTCCCCTGCCACGTCAGCATCGTTGACGGTCACTTCATACAATCAACTTCAAAATTCTCGGAGTTTTCAGATGGGGTTTACGTTGGTAATTTGTCAAAATTGAATGGTGTTATTGCTAAGAGGGTTTTGGAATTGGTATCTGGATTGGACGGTGGAGATTTATTTTGGTCGATTAATGGAATGGGTGCACCGGATTTGACGGTGGTTTATGTACCGGAGGGTGTTCAGGTTGAAACTCCGGTTCATTTGGGTTATGTATCGTTGCAGAGTAGTAAGGAAGGTTTGAATGAGATGTATATATCGAATCCGAGGGTTTTGGTGGTGGTGGAGAATGGTGGTGAGGTTGATATAGTTGAGGAGTTTGAAGGGAATGATAATGAGTGTTATTGGAGTAATGCTGTTTTGGAGGTTGTGATTGGGGAAGGTGGCAAGGTTAGACATTCTTATGTTCAGAATCAGTCGTTGCTTGCCGCGCATATCAAATGGACTTCTGTTCGTCAGGAAGCATCTAGTACATATGAGCTTACAGAAGTAAGCACAGGAGGCAAACTTGGAAGGCACAATCTTCATATCAAACAACTAGGTCCGGACACAGTGACAGAGTTATCAACTTTGCACTTGTCTGTTGGTAATCAAACACAGGATCTTCACAGTAGTCTTGTATTGGATCATCCAAGGGGTTATTCCCGTCAGATTCATAAGTGCATTGTGGCTCATTCACAGGGACAAGCAGTTTTTGACGGAAACGTTAAGGTTAACAGGTATGCTCAGCAGACAGATGCTGGACAGTTATCAAGAAGCCTTCTTCTTGAACCTCGTGCAACTGTAAATGTTAAACCAAATCTCCAAATCATTGCTGATGACGTCAAGTGTTCCCATGGAGCTGCAATAAGTGACCTGGAACAAAGCCAACTTCTGTATTTCCAAGCACGTGGCATTGATTCAGAAACAGCTAGAAGGGTTCTAATTTTTGCCTTTGGAGGGGAAGTGATAGATAAGATTCCCAATTCTTCCATTAGAGATAGAGTACGAAGTCAGATTAAAAGTTTATTGGATCCATCTCCTAAATGA

Protein sequence

>MsG0580024679.01.T01

MSGIALTPAAFNSIIPSSSSSSSKSQKLIRTKTRVTFNNAISISSDPFILDLAETLEDSVPTPQPLHSLRESSSQSLLSSPWPSRKHEPFRFNDFSFLRSSQILPAPIPTTTTTTAPDQFPCHVSIVDGHFIQSTSKFSEFSDGVYVGNLSKLNGVIAKRVLELVSGLDGGDLFWSINGMGAPDLTVVYVPEGVQVETPVHLGYVSLQSSKEGLNEMYISNPRVLVVVENGGEVDIVEEFEGNDNECYWSNAVLEVVIGEGGKVRHSYVQNQSLLAAHIKWTSVRQEASSTYELTEVSTGGKLGRHNLHIKQLGPDTVTELSTLHLSVGNQTQDLHSSLVLDHPRGYSRQIHKCIVAHSQGQAVFDGNVKVNRYAQQTDAGQLSRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEQSQLLYFQARGIDSETARRVLIFAFGGEVIDKIPNSSIRDRVRSQIKSLLDPSPK*