AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380017661.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017661.01.T01 MTR_3g109650 87.086 573 58 2 1 557 1 573 0.0 1004
MsG0380017661.01.T01 MTR_3g109650 94.316 475 27 0 83 557 1 475 0.0 919
MsG0380017661.01.T01 MTR_1g006695 60.398 452 164 9 1 442 1 447 0.0 519
MsG0380017661.01.T01 MTR_8g094410 28.355 462 251 16 17 462 15 412 2.11e-33 132
MsG0380017661.01.T01 MTR_8g094410 28.868 433 233 16 17 433 15 388 2.87e-33 131
MsG0380017661.01.T01 MTR_3g096780 26.556 482 289 17 1 471 4 431 2.89e-31 126
MsG0380017661.01.T01 MTR_8g094410 29.517 393 208 17 76 462 34 363 1.45e-26 112
MsG0380017661.01.T01 MTR_8g094410 27.515 338 170 14 17 330 15 301 1.30e-16 82.4
MsG0380017661.01.T01 MTR_8g094410 29.589 365 191 15 76 433 34 339 2.45e-26 110
MsG0380017661.01.T01 MTR_8g094410 27.219 338 171 14 17 330 15 301 6.07e-16 80.1
MsG0380017661.01.T01 MTR_8g094410 33.209 268 139 11 169 433 24 254 1.69e-25 107
MsG0380017661.01.T01 MTR_8g094410 32.500 280 144 12 186 462 2 239 7.47e-24 102
MsG0380017661.01.T01 MTR_7g016640 26.559 433 197 17 10 417 57 393 2.26e-23 103
MsG0380017661.01.T01 MTR_7g016640 26.559 433 197 17 10 417 57 393 2.59e-23 102
MsG0380017661.01.T01 MTR_0095s0070 27.972 286 150 11 34 305 27 270 1.68e-17 83.2
MsG0380017661.01.T01 MTR_0095s0070 28.846 260 139 11 76 333 30 245 5.39e-13 70.1
MsG0380017661.01.T01 MTR_0095s0070 32.716 162 92 6 275 435 32 177 1.97e-11 65.5
MsG0380017661.01.T01 MTR_3g069030 30.315 254 131 10 180 415 214 439 7.22e-17 83.6
MsG0380017661.01.T01 MTR_3g069030 25.526 380 210 16 5 342 86 434 3.11e-11 66.2
MsG0380017661.01.T01 MTR_0024s0070 26.471 306 188 12 13 311 86 361 1.17e-16 82.4
MsG0380017661.01.T01 MTR_0024s0070 25.893 336 186 15 14 330 35 326 2.92e-14 75.1
MsG0380017661.01.T01 MTR_0024s0070 25.127 394 232 17 35 415 4 347 3.00e-14 75.1
MsG0380017661.01.T01 MTR_4g029410 28.063 253 155 9 167 416 158 386 3.77e-16 82.4
MsG0380017661.01.T01 MTR_4g029410 25.075 335 192 13 17 330 68 364 5.54e-14 75.9
MsG0380017661.01.T01 MTR_4g029410 26.510 298 173 13 136 422 24 286 3.19e-11 67.0
MsG0380017661.01.T01 MTR_7g063440 24.374 439 227 18 2 415 7 365 6.57e-16 80.1
MsG0380017661.01.T01 MTR_7g063440 24.374 439 227 18 2 415 99 457 1.23e-15 80.1
MsG0380017661.01.T01 MTR_3g113250 30.579 242 131 10 184 415 61 275 1.45e-15 80.1
MsG0380017661.01.T01 MTR_1g042800 25.329 304 190 10 133 429 316 589 4.16e-15 79.3
MsG0380017661.01.T01 MTR_1g042800 25.305 328 177 12 20 320 316 602 1.35e-12 71.2
MsG0380017661.01.T01 MTR_1g042800 25.368 272 169 8 15 273 366 616 6.77e-12 68.9
MsG0380017661.01.T01 MTR_1g042800 26.267 217 128 7 211 415 281 477 6.94e-11 65.9
MsG0380017661.01.T01 MTR_1g099220 26.736 288 160 11 149 415 238 495 3.24e-14 76.6
MsG0380017661.01.T01 MTR_1g099220 26.959 319 192 12 119 429 322 607 8.91e-14 75.1
MsG0380017661.01.T01 MTR_1g099220 23.894 339 185 14 11 320 326 620 1.24e-11 68.2
MsG0380017661.01.T01 MTR_5g089900 26.059 307 186 11 133 431 382 655 7.49e-14 75.5
MsG0380017661.01.T01 MTR_5g089900 27.869 244 137 8 183 415 327 542 2.36e-13 73.6
MsG0380017661.01.T01 MTR_7g072410 28.794 257 145 12 178 429 368 591 9.35e-14 75.1
MsG0380017661.01.T01 MTR_7g072410 23.861 461 253 19 20 432 321 731 1.03e-11 68.6
MsG0380017661.01.T01 MTR_7g072410 26.852 216 125 6 211 415 286 479 1.80e-11 67.8
MsG0380017661.01.T01 MTR_6g034795 25.352 284 167 8 149 415 237 492 9.62e-14 75.1
MsG0380017661.01.T01 MTR_6g034795 27.044 318 193 13 119 429 319 604 2.97e-12 70.1
MsG0380017661.01.T01 MTR_3g097060 25.312 320 200 10 16 320 121 416 2.09e-13 72.8
MsG0380017661.01.T01 MTR_3g097060 26.761 426 213 18 39 425 40 405 1.12e-11 67.4
MsG0380017661.01.T01 MTR_3g064560 25.153 326 196 14 117 431 345 633 2.28e-13 73.6
MsG0380017661.01.T01 MTR_5g020630 23.656 372 195 13 118 438 105 438 2.14e-12 69.7
MsG0380017661.01.T01 MTR_3g086300 22.995 374 238 13 135 498 153 486 8.57e-11 65.1
MsG0380017661.01.T01 MTR_5g038220 29.464 224 123 11 211 429 17 210 9.98e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017661.01.T01 AT5G11580 50.707 566 226 11 11 552 12 548 0.0 538
MsG0380017661.01.T01 AT5G11580 53.555 422 164 8 138 552 1 397 7.64e-152 441
MsG0380017661.01.T01 AT5G63860 27.842 431 243 15 16 433 16 391 2.33e-32 129
MsG0380017661.01.T01 AT5G63860 26.359 368 194 14 3 342 51 369 4.83e-20 93.6
MsG0380017661.01.T01 AT5G16040 27.361 413 237 18 35 436 6 366 6.12e-20 92.4
MsG0380017661.01.T01 AT3G02300 26.995 426 204 19 10 417 67 403 8.33e-20 93.2
MsG0380017661.01.T01 AT3G02300 26.995 426 204 19 10 417 56 392 8.57e-20 92.8
MsG0380017661.01.T01 AT5G12350 24.766 428 209 17 17 431 310 637 1.83e-18 90.1
MsG0380017661.01.T01 AT5G12350 25.305 328 202 10 20 335 365 661 5.41e-15 79.0
MsG0380017661.01.T01 AT4G14368 28.713 303 182 12 133 431 327 599 9.34e-18 87.8
MsG0380017661.01.T01 AT4G14368 25.694 432 230 17 20 416 327 702 1.27e-15 80.9
MsG0380017661.01.T01 AT4G14368 25.000 288 161 12 149 415 232 485 2.27e-12 70.5
MsG0380017661.01.T01 AT4G14368 28.713 303 182 12 133 431 325 597 1.15e-17 87.4
MsG0380017661.01.T01 AT4G14368 25.694 432 230 17 20 416 325 700 1.63e-15 80.5
MsG0380017661.01.T01 AT4G14368 25.000 288 161 12 149 415 230 483 3.45e-12 70.1
MsG0380017661.01.T01 AT4G14368 28.713 303 182 12 133 431 320 592 1.30e-17 87.4
MsG0380017661.01.T01 AT4G14368 25.694 432 230 17 20 416 320 695 1.61e-15 80.5
MsG0380017661.01.T01 AT4G14368 25.000 288 161 12 149 415 225 478 3.72e-12 70.1
MsG0380017661.01.T01 AT4G14368 28.713 303 182 12 133 431 327 599 1.39e-17 87.4
MsG0380017661.01.T01 AT4G14368 25.694 432 230 17 20 416 327 702 1.72e-15 80.5
MsG0380017661.01.T01 AT4G14368 25.000 288 161 12 149 415 232 485 4.00e-12 69.7
MsG0380017661.01.T01 AT3G23270 26.190 420 213 17 17 431 257 584 1.88e-17 86.7
MsG0380017661.01.T01 AT3G23270 27.329 322 175 15 20 320 312 595 1.48e-14 77.4
MsG0380017661.01.T01 AT3G23270 26.190 420 213 17 17 431 253 580 2.14e-17 86.7
MsG0380017661.01.T01 AT3G23270 27.329 322 175 15 20 320 308 591 1.57e-14 77.4
MsG0380017661.01.T01 AT5G19420 28.049 246 132 7 183 415 348 561 7.92e-17 84.7
MsG0380017661.01.T01 AT5G19420 26.603 312 177 12 133 431 403 675 5.00e-16 82.4
MsG0380017661.01.T01 AT5G19420 26.524 328 198 11 20 335 403 699 1.44e-15 80.9
MsG0380017661.01.T01 AT5G19420 28.049 246 132 7 183 415 314 527 8.46e-17 84.7
MsG0380017661.01.T01 AT5G19420 26.603 312 177 12 133 431 369 641 5.44e-16 82.0
MsG0380017661.01.T01 AT5G19420 26.524 328 198 11 20 335 369 665 1.34e-15 80.9
MsG0380017661.01.T01 AT5G19420 28.049 246 132 7 183 415 314 527 9.85e-17 84.3
MsG0380017661.01.T01 AT5G19420 26.603 312 177 12 133 431 369 641 5.53e-16 82.0
MsG0380017661.01.T01 AT5G19420 25.915 328 200 10 20 335 369 665 1.23e-15 80.9
MsG0380017661.01.T01 AT3G55580 31.274 259 127 10 180 415 233 463 1.37e-16 83.2
MsG0380017661.01.T01 AT3G55580 25.688 327 158 14 90 385 213 485 1.95e-11 67.0
MsG0380017661.01.T01 AT1G65920 26.230 305 187 10 119 415 335 609 5.55e-16 82.0
MsG0380017661.01.T01 AT1G65920 26.230 305 187 10 119 415 289 563 6.24e-16 82.0
MsG0380017661.01.T01 AT5G42140 25.617 324 199 11 20 330 282 576 6.35e-16 82.0
MsG0380017661.01.T01 AT5G42140 25.846 325 196 14 117 431 318 607 4.33e-14 76.3
MsG0380017661.01.T01 AT5G42140 27.018 285 163 13 149 415 236 493 5.76e-13 72.4
MsG0380017661.01.T01 AT5G42140 25.617 324 199 11 20 330 282 576 6.35e-16 82.0
MsG0380017661.01.T01 AT5G42140 25.846 325 196 14 117 431 318 607 4.33e-14 76.3
MsG0380017661.01.T01 AT5G42140 27.018 285 163 13 149 415 236 493 5.76e-13 72.4
MsG0380017661.01.T01 AT5G48330 23.884 448 203 14 12 415 79 432 6.88e-16 80.9
MsG0380017661.01.T01 AT5G48330 25.145 346 178 11 114 415 123 431 2.03e-15 79.3
MsG0380017661.01.T01 AT3G02510 26.866 335 194 17 113 437 16 309 2.36e-15 77.8
MsG0380017661.01.T01 AT3G53830 30.147 272 135 10 171 415 232 475 3.38e-15 79.0
MsG0380017661.01.T01 AT3G53830 30.147 272 135 10 171 415 204 447 3.67e-15 78.6
MsG0380017661.01.T01 AT3G02510 26.866 335 194 17 113 437 74 367 8.96e-15 76.6
MsG0380017661.01.T01 AT1G19880 29.675 246 134 9 184 415 61 281 2.62e-14 76.3
MsG0380017661.01.T01 AT3G47660 24.507 355 176 14 119 415 290 610 4.02e-14 76.3
MsG0380017661.01.T01 AT3G47660 24.507 355 176 14 119 415 287 607 4.08e-14 76.3
MsG0380017661.01.T01 AT3G47660 24.507 355 176 14 119 415 287 607 4.08e-14 76.3
MsG0380017661.01.T01 AT3G47660 24.507 355 176 14 119 415 290 610 4.38e-14 75.9
MsG0380017661.01.T01 AT3G47660 24.716 352 179 13 119 415 145 465 4.47e-14 75.9
MsG0380017661.01.T01 AT3G47660 24.716 352 179 13 119 415 212 532 5.18e-14 75.9
MsG0380017661.01.T01 AT3G47660 24.716 352 179 13 119 415 326 646 5.53e-14 75.9
MsG0380017661.01.T01 AT5G60870 25.382 327 197 12 18 333 104 394 8.82e-14 73.9
MsG0380017661.01.T01 AT5G16040 27.483 302 179 11 35 330 6 273 1.96e-13 72.4
MsG0380017661.01.T01 AT5G16040 26.073 303 172 10 17 309 40 300 9.19e-12 67.0
MsG0380017661.01.T01 AT1G76950 26.282 312 134 13 166 415 326 603 1.69e-12 70.9
MsG0380017661.01.T01 AT1G76950 27.419 248 134 9 183 415 283 499 1.96e-12 70.9
MsG0380017661.01.T01 AT1G69710 30.058 173 102 5 168 335 446 604 2.36e-12 70.5
MsG0380017661.01.T01 AT1G69710 24.545 330 177 12 20 320 357 643 3.07e-11 67.0
MsG0380017661.01.T01 AT1G69710 30.058 173 102 5 168 335 433 591 2.50e-12 70.5
MsG0380017661.01.T01 AT1G69710 24.545 330 177 12 20 320 344 630 2.57e-11 67.0
MsG0380017661.01.T01 AT3G26100 25.373 402 239 20 22 402 150 511 2.98e-12 69.7
MsG0380017661.01.T01 AT3G26100 25.373 402 239 20 22 402 150 511 2.98e-12 69.7
MsG0380017661.01.T01 AT3G26100 25.373 402 239 20 22 402 150 511 2.98e-12 69.7
MsG0380017661.01.T01 AT3G26100 25.187 401 241 19 22 402 50 411 3.19e-12 69.3
MsG0380017661.01.T01 AT3G26100 25.187 401 241 19 22 402 50 411 3.19e-12 69.3
MsG0380017661.01.T01 AT3G26100 25.187 401 241 19 22 402 50 411 3.19e-12 69.3
MsG0380017661.01.T01 AT3G53830 29.461 241 116 9 171 384 204 417 1.51e-11 67.0
MsG0380017661.01.T01 AT5G60870 25.221 226 132 6 119 333 26 225 1.76e-11 65.5
MsG0380017661.01.T01 AT3G53830 29.461 241 116 9 171 384 232 445 2.14e-11 66.6
MsG0380017661.01.T01 AT1G27060 25.909 220 129 8 182 399 49 236 2.49e-11 66.2
MsG0380017661.01.T01 AT5G08710 25.000 296 184 9 133 415 139 409 4.52e-11 65.5
MsG0380017661.01.T01 AT5G08710 25.466 322 203 12 13 320 132 430 5.34e-11 65.5

Find 175 sgRNAs with CRISPR-Local

Find 296 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTGTTTCTGCTATTATTTC+GGG 0.152473 3:+99262331 None:intergenic
CTGTGTCCTTGACTACTTTA+TGG 0.167956 3:-99263521 MsG0380017661.01.T01:CDS
ATCTGTTTCTGCTATTATTT+CGG 0.168624 3:+99262330 None:intergenic
TTTATATCTTATTTGATTTC+AGG 0.184330 3:-99265618 None:intergenic
CTTTGTGGCAATTCTTTAAT+AGG 0.227515 3:+99262769 None:intergenic
GGGATATCTTGCTCATTAAA+AGG 0.234552 3:+99262205 None:intergenic
CCCTGTTTCAATGCAGAATT+CGG 0.240289 3:-99262185 MsG0380017661.01.T01:CDS
CACCTTCTTTGCTTTCTTGT+GGG 0.270672 3:+99263193 None:intergenic
AGAAGACAAAGCATCATTAA+AGG 0.297904 3:-99263383 MsG0380017661.01.T01:intron
TCACACACTCTTCTTCTTAC+TGG 0.316495 3:-99265483 MsG0380017661.01.T01:intron
AGATGGGTCTGTTGAAGAAT+TGG 0.319222 3:+99263411 None:intergenic
AGCCATGGCCAATTAGGTTT+GGG 0.319335 3:-99263009 MsG0380017661.01.T01:CDS
ACAAGTGTTGTGTCCTCAAC+TGG 0.324550 3:-99262709 MsG0380017661.01.T01:CDS
TATAACAGCCATGGCCAATT+AGG 0.326743 3:-99263015 MsG0380017661.01.T01:CDS
CCCGAATTCTGCATTGAAAC+AGG 0.327945 3:+99262184 None:intergenic
TCAAACAAAGCTATCTATAA+TGG 0.330445 3:-99262269 MsG0380017661.01.T01:CDS
AGCAGACCATCTAAGCAAAA+TGG 0.346610 3:+99261907 None:intergenic
CTTATTTGATTTCAGGAGAT+TGG 0.351802 3:-99265611 None:intergenic
AGGGGAAGGAGTGGAGTTCT+TGG 0.354576 3:-99262475 MsG0380017661.01.T01:CDS
CAACTGGGGATGTGTGGTCA+TGG 0.354605 3:-99262693 MsG0380017661.01.T01:CDS
AAAGATCAAAGAAATTATAA+AGG 0.357258 3:-99262038 MsG0380017661.01.T01:CDS
GGGACATAAGGTGTGGTCTT+GGG 0.367064 3:-99262500 MsG0380017661.01.T01:CDS
CTCAACTTTGGAAATCCTAA+TGG 0.367861 3:-99265261 MsG0380017661.01.T01:CDS
CAGCCATGGCCAATTAGGTT+TGG 0.369616 3:-99263010 MsG0380017661.01.T01:CDS
TAGTTCCTTGCTTACTTAGC+AGG 0.373149 3:-99263453 MsG0380017661.01.T01:CDS
CGCCCCACACACAACTTTAA+CGG 0.376768 3:+99262549 None:intergenic
ACCTTTGGCCTTGGTGAGAA+TGG 0.379729 3:-99262835 MsG0380017661.01.T01:CDS
TCTTTGAGACCCTCAATTGT+TGG 0.379777 3:+99262403 None:intergenic
GAAAGCATGTGCTGGACCTT+TGG 0.382764 3:-99262850 MsG0380017661.01.T01:CDS
CAGATGATAGGAAGCTAGTT+AGG 0.383103 3:-99262117 MsG0380017661.01.T01:CDS
GCCCCACACACAACTTTAAC+GGG 0.386125 3:+99262550 None:intergenic
AATGCAGAATTCGGGTTCAA+TGG 0.388876 3:-99262176 MsG0380017661.01.T01:CDS
TGTGATAGCTTGTCGGGGTT+CGG 0.391434 3:+99265534 None:intergenic
AGAGGAATGTTTGGACGGCT+TGG 0.396014 3:-99265320 MsG0380017661.01.T01:CDS
CCTGTTTCAATGCAGAATTC+GGG 0.396597 3:-99262184 MsG0380017661.01.T01:CDS
ATTTATTTACCTCTAAAGAT+TGG 0.398386 3:+99262008 None:intergenic
TCTTGGGGTAGGGGAAGGAG+TGG 0.407624 3:-99262484 MsG0380017661.01.T01:CDS
GTCGGGGTTCGGATAACTTC+CGG 0.414083 3:+99265545 None:intergenic
AATCGTGCTGAAACAAATTC+TGG 0.415541 3:-99262634 MsG0380017661.01.T01:CDS
CCACCTTCTTTGCTTTCTTG+TGG 0.415767 3:+99263192 None:intergenic
TGTTGGGGTAGAGGAATGTT+TGG 0.418285 3:-99265329 MsG0380017661.01.T01:CDS
GATGGGTCTGTTGAAGAATT+GGG 0.418538 3:+99263412 None:intergenic
TGTTAGAGGCAGCAGATGAT+AGG 0.420451 3:-99262129 MsG0380017661.01.T01:CDS
TGGGGAATGGAGAAGGGTCT+TGG 0.421651 3:-99262673 MsG0380017661.01.T01:CDS
ACACTGTGTTTAGTTCCATT+AGG 0.422574 3:+99265246 None:intergenic
GTTTCACACCAACACCAGTC+TGG 0.423485 3:-99263152 MsG0380017661.01.T01:CDS
GAAATAAGATGTATGCTTTG+TGG 0.424250 3:+99262754 None:intergenic
GGATGTTTCCCCACATCCAT+AGG 0.424782 3:+99263214 None:intergenic
ATCTTGTGTGATAGCTTGTC+GGG 0.426650 3:+99265528 None:intergenic
CAATGGATATTGCAAAAGAA+TGG 0.431243 3:-99262159 MsG0380017661.01.T01:CDS
GAGGAATGTTTGGACGGCTT+GGG 0.431885 3:-99265319 MsG0380017661.01.T01:CDS
AAGATCTACTATGCTACTCT+TGG 0.432359 3:-99263041 MsG0380017661.01.T01:CDS
GCTTTGTCTTCTGCTTCAGA+TGG 0.432694 3:+99263394 None:intergenic
AACTGGGGATGTGTGGTCAT+GGG 0.432745 3:-99262692 MsG0380017661.01.T01:CDS
AGGGACATAAGGTGTGGTCT+TGG 0.432771 3:-99262501 MsG0380017661.01.T01:CDS
CTTTGTCTTCTGCTTCAGAT+GGG 0.433747 3:+99263395 None:intergenic
ATGCTTTCTAATGTGCCATC+AGG 0.434547 3:+99262865 None:intergenic
GATGGTCAACTTGGTCTTAG+TGG 0.440176 3:-99263499 MsG0380017661.01.T01:CDS
GGAGTGTCTCCAATCTTTAG+AGG 0.441022 3:-99262017 MsG0380017661.01.T01:CDS
TCTTGGGAATGGAAAGGAAA+TGG 0.444052 3:-99262458 MsG0380017661.01.T01:CDS
TACTTTATGGATGGTCAACT+TGG 0.444329 3:-99263508 MsG0380017661.01.T01:CDS
TGTTGCTCAGGAGGGACATA+AGG 0.446097 3:-99262512 MsG0380017661.01.T01:CDS
TAAGGTGTGGTCTTGGGGTA+GGG 0.448746 3:-99262494 MsG0380017661.01.T01:CDS
AGATGGCAGTGTATACTGTT+GGG 0.451480 3:-99265345 MsG0380017661.01.T01:CDS
AAGGTGTGGTCTTGGGGTAG+GGG 0.460092 3:-99262493 MsG0380017661.01.T01:CDS
CTGTGGCCTCCAACAATTGA+GGG 0.461200 3:-99262412 MsG0380017661.01.T01:CDS
ATGTGCTGGACCTTTGGCCT+TGG 0.462273 3:-99262844 MsG0380017661.01.T01:CDS
GTCCCGTTAAAGTTGTGTGT+GGG 0.467611 3:-99262552 MsG0380017661.01.T01:CDS
AAATATGCTAGTATACTTCA+TGG 0.467821 3:-99262244 MsG0380017661.01.T01:CDS
GGATGTGTGGTCATGGGGAA+TGG 0.471544 3:-99262686 MsG0380017661.01.T01:CDS
AGTGTATACTGTTGGGGTAG+AGG 0.472628 3:-99265338 MsG0380017661.01.T01:CDS
ACATACTGTTGTTGTTGCTC+AGG 0.475103 3:-99262524 MsG0380017661.01.T01:CDS
AGATCTACTATGCTACTCTT+GGG 0.475512 3:-99263040 MsG0380017661.01.T01:CDS
ATAAGGTGTGGTCTTGGGGT+AGG 0.476461 3:-99262495 MsG0380017661.01.T01:CDS
GTTTCAGCACGATTAGCATC+AGG 0.478375 3:+99262643 None:intergenic
AATGGATATTGCAAAAGAAT+GGG 0.480013 3:-99262158 MsG0380017661.01.T01:CDS
GTCTCCTTGGACAATTTATG+AGG 0.480156 3:-99262935 MsG0380017661.01.T01:CDS
CTTGGTGAGAATGGCCAACT+TGG 0.484003 3:-99262826 MsG0380017661.01.T01:CDS
AGAATGGGAGAACATGTTAG+AGG 0.485019 3:-99262143 MsG0380017661.01.T01:CDS
GGGGAAGGAGTGGAGTTCTT+GGG 0.485779 3:-99262474 MsG0380017661.01.T01:CDS
TGTGGTCTTGGGGTAGGGGA+AGG 0.486035 3:-99262489 MsG0380017661.01.T01:CDS
TTGAGACCCTCAATTGTTGG+AGG 0.493550 3:+99262406 None:intergenic
TTGATAACCGCAGGACCCTA+TGG 0.496940 3:-99263230 MsG0380017661.01.T01:CDS
ATGTTTGGACGGCTTGGGAA+TGG 0.501627 3:-99265314 MsG0380017661.01.T01:CDS
TGTGTTCTCGCGGGAGGCAA+TGG 0.501946 3:-99265574 MsG0380017661.01.T01:exon
TACTTGACGAGGAGTCTCCT+TGG 0.502136 3:-99262948 MsG0380017661.01.T01:CDS
GGACATAAGGTGTGGTCTTG+GGG 0.505598 3:-99262499 MsG0380017661.01.T01:CDS
GATCTTGTGTGATAGCTTGT+CGG 0.509009 3:+99265527 None:intergenic
TGCTAAGTAAGCAAGGAACT+AGG 0.509756 3:+99263455 None:intergenic
GTGGTCATGGGGAATGGAGA+AGG 0.511672 3:-99262680 MsG0380017661.01.T01:CDS
ACCGCAGGACCCTATGGATG+TGG 0.517261 3:-99263224 MsG0380017661.01.T01:CDS
CACACAACTTTAACGGGACC+CGG 0.519555 3:+99262556 None:intergenic
AAACGAGCATGTCGTAGCTC+TGG 0.521902 3:-99263091 MsG0380017661.01.T01:CDS
TTTGATTTCAGGAGATTGGT+AGG 0.522796 3:-99265607 MsG0380017661.01.T01:five_prime_UTR
AGGAGTGGAGTTCTTGGGAA+TGG 0.526030 3:-99262469 MsG0380017661.01.T01:CDS
TCTGTGGCCTCCAACAATTG+AGG 0.528618 3:-99262413 MsG0380017661.01.T01:CDS
TTTCACACCAACACCAGTCT+GGG 0.530672 3:-99263151 MsG0380017661.01.T01:CDS
ATCCCACAAGAAAGCAAAGA+AGG 0.530731 3:-99263195 MsG0380017661.01.T01:CDS
GTATCACACTCTTATGACTC+TGG 0.533532 3:-99261845 MsG0380017661.01.T01:three_prime_UTR
GAGATGGCAGTGTATACTGT+TGG 0.536011 3:-99265346 MsG0380017661.01.T01:CDS
GTCCTTGACTACTTTATGGA+TGG 0.536626 3:-99263517 MsG0380017661.01.T01:CDS
AGTAAGCAGAGCAGTGTGAA+AGG 0.538346 3:+99262900 None:intergenic
GCTAAGTAAGCAAGGAACTA+GGG 0.538548 3:+99263456 None:intergenic
AGCAGGAGGAATGATGTCTC+TGG 0.541237 3:-99263256 MsG0380017661.01.T01:CDS
TACTGTTGTTGTTGCTCAGG+AGG 0.541350 3:-99262521 MsG0380017661.01.T01:CDS
CATCTTATTTCTGTTGACTG+TGG 0.546907 3:-99262742 MsG0380017661.01.T01:CDS
ACTGGGGATGTGTGGTCATG+GGG 0.547069 3:-99262691 MsG0380017661.01.T01:CDS
CAAGTGTTGTGTCCTCAACT+GGG 0.549422 3:-99262708 MsG0380017661.01.T01:CDS
TGATAGGAAGCTAGTTAGGA+TGG 0.550267 3:-99262113 MsG0380017661.01.T01:CDS
CTCTGGCTATTGATAACCGC+AGG 0.554295 3:-99263239 MsG0380017661.01.T01:CDS
CAGATGTGTACTGTCAAAGC+AGG 0.555675 3:-99263273 MsG0380017661.01.T01:CDS
CCATGGCCAATTAGGTTTGG+GGG 0.558598 3:-99263007 MsG0380017661.01.T01:CDS
AAATTGCATGAGATGAGAAG+AGG 0.559890 3:+99262595 None:intergenic
TGAGATGAGAAGAGGAGAGA+GGG 0.561465 3:+99262603 None:intergenic
GCACATTAGAAAGCATGTGC+TGG 0.562548 3:-99262858 MsG0380017661.01.T01:CDS
GATGTTTCCCCACATCCATA+GGG 0.569483 3:+99263215 None:intergenic
GGTCCCGTTAAAGTTGTGTG+TGG 0.570763 3:-99262553 MsG0380017661.01.T01:CDS
TGAAACCTGCTAAGTAAGCA+AGG 0.571693 3:+99263448 None:intergenic
TAGCTCTGATGAGCAAGATA+AGG 0.571932 3:-99262368 MsG0380017661.01.T01:CDS
GCCATGGCCAATTAGGTTTG+GGG 0.572289 3:-99263008 MsG0380017661.01.T01:CDS
GGCAATTCTTTAATAGGAGT+AGG 0.572941 3:+99262775 None:intergenic
GGGGTAGAGGAATGTTTGGA+CGG 0.573684 3:-99265325 MsG0380017661.01.T01:CDS
TGGTCATGGGGAATGGAGAA+GGG 0.574251 3:-99262679 MsG0380017661.01.T01:CDS
CCGCAGGACCCTATGGATGT+GGG 0.574790 3:-99263223 MsG0380017661.01.T01:CDS
CTGTTTCTGCTATTATTTCG+GGG 0.574872 3:+99262332 None:intergenic
GACCATCCATAAAGTAGTCA+AGG 0.576346 3:+99263515 None:intergenic
CAGAAAGATTGATCAAGTGA+AGG 0.576359 3:+99261876 None:intergenic
GCCATTCTCACCAAGGCCAA+AGG 0.583660 3:+99262834 None:intergenic
GCGTTGTTCCGTGTCCAAGT+TGG 0.584020 3:+99262812 None:intergenic
AAGATCATTGACATCGCCGC+TGG 0.584854 3:-99265510 MsG0380017661.01.T01:CDS
TCACGGTCGAACTGTTGTCA+AGG 0.586698 3:-99263124 MsG0380017661.01.T01:CDS
ACACTCCCACCATTGTTCTG+TGG 0.592698 3:-99262429 MsG0380017661.01.T01:CDS
AATTGAGGGTCTCAAAGAAG+AGG 0.594584 3:-99262398 MsG0380017661.01.T01:CDS
AGAAAGATTGATCAAGTGAA+GGG 0.597206 3:+99261877 None:intergenic
TGGAGTTCTTGGGAATGGAA+AGG 0.598408 3:-99262464 MsG0380017661.01.T01:CDS
TGTCCTCAACTGGGGATGTG+TGG 0.599621 3:-99262699 MsG0380017661.01.T01:CDS
TGACCACACATCCCCAGTTG+AGG 0.603737 3:+99262696 None:intergenic
ACTGTTGTCAAGGTTTCATG+TGG 0.605298 3:-99263114 MsG0380017661.01.T01:CDS
CACAAGAAAGCAAAGAAGGT+GGG 0.607070 3:-99263191 MsG0380017661.01.T01:CDS
CGACCGTGAAAATCCCAGAC+TGG 0.609935 3:+99263138 None:intergenic
AAGAGTTGTGTTCTCGCGGG+AGG 0.610476 3:-99265580 MsG0380017661.01.T01:five_prime_UTR
TCCCGTTAAAGTTGTGTGTG+GGG 0.612591 3:-99262551 MsG0380017661.01.T01:CDS
ACTGTTGTTGTTGCTCAGGA+GGG 0.615836 3:-99262520 MsG0380017661.01.T01:CDS
TGGAGGCCACAGAACAATGG+TGG 0.617338 3:+99262423 None:intergenic
CGCAGGACCCTATGGATGTG+GGG 0.619840 3:-99263222 MsG0380017661.01.T01:CDS
TGAAAATCCCAGACTGGTGT+TGG 0.620193 3:+99263144 None:intergenic
CCGAATTCTGCATTGAAACA+GGG 0.623730 3:+99262185 None:intergenic
CGGGAGGCAATGGAAGACGC+CGG 0.624501 3:-99265564 MsG0380017661.01.T01:exon
TCACACCAGTTAGCATGTCA+CGG 0.624713 3:+99262080 None:intergenic
GAGAATGGCCAACTTGGACA+CGG 0.624737 3:-99262820 MsG0380017661.01.T01:CDS
CGTTAAAGTTGTGTGTGGGG+CGG 0.625152 3:-99262548 MsG0380017661.01.T01:CDS
CCCACATCCATAGGGTCCTG+CGG 0.627832 3:+99263223 None:intergenic
GCTACCTCATAAATTGTCCA+AGG 0.633257 3:+99262931 None:intergenic
GGAGGCCACAGAACAATGGT+GGG 0.639775 3:+99262424 None:intergenic
TCTTGGGGTTATAACAGCCA+TGG 0.641426 3:-99263024 MsG0380017661.01.T01:CDS
CTCAGGAGGGACATAAGGTG+TGG 0.642472 3:-99262507 MsG0380017661.01.T01:CDS
GATCTACTATGCTACTCTTG+GGG 0.643163 3:-99263039 MsG0380017661.01.T01:CDS
CCACAAGAAAGCAAAGAAGG+TGG 0.643526 3:-99263192 MsG0380017661.01.T01:CDS
GATGGCAGTGTATACTGTTG+GGG 0.643574 3:-99265344 MsG0380017661.01.T01:CDS
AACAGATGAGAAATTATCCA+CGG 0.644744 3:-99262314 MsG0380017661.01.T01:CDS
ACTTGGTCTTAGTGGAGAGG+AGG 0.646664 3:-99263491 MsG0380017661.01.T01:CDS
ATGAGATGAGAAGAGGAGAG+AGG 0.649282 3:+99262602 None:intergenic
TGTTGGAGGCCACAGAACAA+TGG 0.649818 3:+99262420 None:intergenic
TCTGATGAGCAAGATAAGGT+CGG 0.653106 3:-99262364 MsG0380017661.01.T01:CDS
ATGTGTACTGTCAAAGCAGG+AGG 0.659985 3:-99263270 MsG0380017661.01.T01:CDS
TCAACTTGGTCTTAGTGGAG+AGG 0.660827 3:-99263494 MsG0380017661.01.T01:CDS
CAAGTTGGCCATTCTCACCA+AGG 0.682599 3:+99262827 None:intergenic
TAGTGCTATAGACTCACATG+AGG 0.698408 3:-99263067 MsG0380017661.01.T01:CDS
AAGAGTGTGTGATTCACCAG+CGG 0.708326 3:+99265494 None:intergenic
CGTGCTGAAACAAATTCTGG+TGG 0.714600 3:-99262631 MsG0380017661.01.T01:CDS
GGGTCTGTTGAAGAATTGGG+CGG 0.724602 3:+99263415 None:intergenic
TCTTGTGTGATAGCTTGTCG+GGG 0.725382 3:+99265529 None:intergenic
AAGTGTTGTGTCCTCAACTG+GGG 0.732964 3:-99262707 MsG0380017661.01.T01:CDS
ACAATTTATGAGGTAGCATG+TGG 0.737032 3:-99262925 MsG0380017661.01.T01:CDS
CTTCAGCTCATTCAACACCG+TGG 0.747313 3:+99262297 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAAAAAAATAAAAATT+TGG - Chr3:99263311-99263330 MsG0380017661.01.T01:intron 0.0%
!!! TCATAAAAAATCAATTTTTT+AGG - Chr3:99263162-99263181 MsG0380017661.01.T01:CDS 10.0%
!!! TGTATTTTTTTTTAACAAAA+TGG - Chr3:99263261-99263280 MsG0380017661.01.T01:CDS 10.0%
!!! TTTAAAATAGTAAGATTTTA+TGG + Chr3:99262914-99262933 None:intergenic 10.0%
!! AAAGATCAAAGAAATTATAA+AGG - Chr3:99265335-99265354 MsG0380017661.01.T01:CDS 15.0%
!! AAGAAAAAGGTAAATAAAAT+TGG + Chr3:99261920-99261939 None:intergenic 15.0%
!! AGAAAAAGGTAAATAAAATT+GGG + Chr3:99261919-99261938 None:intergenic 15.0%
!! TAAACAACGTTATTAAATAT+CGG + Chr3:99262504-99262523 None:intergenic 15.0%
!! TATAGGTTATGTTAATATTA+AGG + Chr3:99262974-99262993 None:intergenic 15.0%
!!! ATTCTTTGAAAATAAGATAA+AGG - Chr3:99263408-99263427 MsG0380017661.01.T01:CDS 15.0%
!!! TCATTTTCAAACATAAAAAA+GGG - Chr3:99265585-99265604 MsG0380017661.01.T01:five_prime_UTR 15.0%
!!! TTCTTTGAAAATAAGATAAA+GGG - Chr3:99263409-99263428 MsG0380017661.01.T01:CDS 15.0%
!! AAAACACAAATAGAATTAGA+CGG + Chr3:99263695-99263714 None:intergenic 20.0%
!! ACTATATCTAATAAATTGGA+TGG + Chr3:99262315-99262334 None:intergenic 20.0%
!! ATAACCAATAATAATAAGCT+GGG + Chr3:99263024-99263043 None:intergenic 20.0%
!! CATAATGAGGTTAATAAATA+TGG + Chr3:99263641-99263660 None:intergenic 20.0%
!! GTAAATTGAAAGAGAAAATT+AGG + Chr3:99262225-99262244 None:intergenic 20.0%
!! TACTTGATAAAAAAGGTTAT+AGG + Chr3:99262991-99263010 None:intergenic 20.0%
!! TATAACCAATAATAATAAGC+TGG + Chr3:99263025-99263044 None:intergenic 20.0%
!! TCCAACTATATCTAATAAAT+TGG + Chr3:99262319-99262338 None:intergenic 20.0%
!! TCCAATTTATTAGATATAGT+TGG - Chr3:99262315-99262334 MsG0380017661.01.T01:CDS 20.0%
!!! AAAATAGATTTTGGGTTAAA+AGG - Chr3:99263078-99263097 MsG0380017661.01.T01:CDS 20.0%
!!! AATATGTTGGTTCATTTATT+TGG - Chr3:99263664-99263683 MsG0380017661.01.T01:intron 20.0%
!!! ATATTTTAACAACTAACTGA+GGG - Chr3:99263042-99263061 MsG0380017661.01.T01:CDS 20.0%
!!! ATGTGAGTAATTTCTTTTTT+TGG + Chr3:99262834-99262853 None:intergenic 20.0%
!!! ATTTATTTACCTCTAAAGAT+TGG + Chr3:99265368-99265387 None:intergenic 20.0%
!!! GTCATTTTCAAACATAAAAA+AGG - Chr3:99265584-99265603 MsG0380017661.01.T01:five_prime_UTR 20.0%
!!! TAACCTTTTTTATCAAGTAT+TGG - Chr3:99262992-99263011 MsG0380017661.01.T01:CDS 20.0%
!!! TATATTTTAACAACTAACTG+AGG - Chr3:99263041-99263060 MsG0380017661.01.T01:CDS 20.0%
!!! TCTTTGAAAATAAGATAAAG+GGG - Chr3:99263410-99263429 MsG0380017661.01.T01:CDS 20.0%
! AAACACAAATAGAATTAGAC+GGG + Chr3:99263694-99263713 None:intergenic 25.0%
! AAACACAGTGTTAAAATAGT+GGG - Chr3:99262139-99262158 MsG0380017661.01.T01:CDS 25.0%
! AAATATGCTAGTATACTTCA+TGG - Chr3:99265129-99265148 MsG0380017661.01.T01:intron 25.0%
! AAGAATGTAAAAATTACAGC+TGG + Chr3:99262268-99262287 None:intergenic 25.0%
! AATGGATATTGCAAAAGAAT+GGG - Chr3:99265215-99265234 MsG0380017661.01.T01:intron 25.0%
! ACGTTGTTTAATTGTGTTAA+AGG - Chr3:99262514-99262533 MsG0380017661.01.T01:CDS 25.0%
! ATATGTATCCTTAATATGCT+TGG - Chr3:99263752-99263771 MsG0380017661.01.T01:intron 25.0%
! ATTGAAAGAGAAAATTAGGA+AGG + Chr3:99262221-99262240 None:intergenic 25.0%
! CAAATTCTGATATGCTATAT+AGG - Chr3:99262463-99262482 MsG0380017661.01.T01:CDS 25.0%
! TAAACACAGTGTTAAAATAG+TGG - Chr3:99262138-99262157 MsG0380017661.01.T01:CDS 25.0%
! TAACCAATAATAATAAGCTG+GGG + Chr3:99263023-99263042 None:intergenic 25.0%
! TATCAAGAATTACACAACTT+TGG + Chr3:99263617-99263636 None:intergenic 25.0%
! TCAAACAAAGCTATCTATAA+TGG - Chr3:99265104-99265123 MsG0380017661.01.T01:intron 25.0%
! TCGAATAATCAAACTTTGTT+GGG - Chr3:99262659-99262678 MsG0380017661.01.T01:CDS 25.0%
! TTCGAATAATCAAACTTTGT+TGG - Chr3:99262658-99262677 MsG0380017661.01.T01:CDS 25.0%
!! AAGTTGATTATAATCAGTGT+AGG + Chr3:99262622-99262641 None:intergenic 25.0%
!! ATACTTCATGGTTCAATTTT+TGG - Chr3:99265141-99265160 MsG0380017661.01.T01:intron 25.0%
!! ATGAATCTTATCATTGATTG+AGG - Chr3:99261988-99262007 MsG0380017661.01.T01:exon 25.0%
!! TGAATCTTATCATTGATTGA+GGG - Chr3:99261989-99262008 MsG0380017661.01.T01:exon 25.0%
!!! ATCTGTTTCTGCTATTATTT+CGG + Chr3:99265046-99265065 None:intergenic 25.0%
!!! ATTTCCAAAGTTGAGTTTTT+TGG + Chr3:99262107-99262126 None:intergenic 25.0%
!!! ATTTGTGTTTTTACAGAAGA+AGG - Chr3:99263704-99263723 MsG0380017661.01.T01:intron 25.0%
!!! GTTTTAAAACTTATATGCCA+AGG - Chr3:99264037-99264056 MsG0380017661.01.T01:intron 25.0%
!!! TCAAGTATTTTTACAACTTC+TGG + Chr3:99264412-99264431 None:intergenic 25.0%
!!! TTGTTTTTAGAAAAGCTACT+TGG - Chr3:99263211-99263230 MsG0380017661.01.T01:CDS 25.0%
!!! TTTCCAAAGTTGAGTTTTTT+GGG + Chr3:99262106-99262125 None:intergenic 25.0%
AAAAGACTCCAAGCATATTA+AGG + Chr3:99263763-99263782 None:intergenic 30.0%
AACAGATGAGAAATTATCCA+CGG - Chr3:99265059-99265078 MsG0380017661.01.T01:intron 30.0%
AACCAATAATAATAAGCTGG+GGG + Chr3:99263022-99263041 None:intergenic 30.0%
AGAAAGATTGATCAAGTGAA+GGG + Chr3:99265499-99265518 None:intergenic 30.0%
AGTTGTAAAAATACTTGACG+AGG - Chr3:99264414-99264433 MsG0380017661.01.T01:intron 30.0%
CAATGGATATTGCAAAAGAA+TGG - Chr3:99265214-99265233 MsG0380017661.01.T01:intron 30.0%
CCAACATATTGATCATAATG+AGG + Chr3:99263654-99263673 None:intergenic 30.0%
CCTCATTATGATCAATATGT+TGG - Chr3:99263651-99263670 MsG0380017661.01.T01:intron 30.0%
CTGCCAATACTTGATAAAAA+AGG + Chr3:99262998-99263017 None:intergenic 30.0%
CTTTGTGGCAATTCTTTAAT+AGG + Chr3:99264607-99264626 None:intergenic 30.0%
GAAATAAGATGTATGCTTTG+TGG + Chr3:99264622-99264641 None:intergenic 30.0%
GGATTCAAGTAAGAAGAAAA+AGG + Chr3:99261933-99261952 None:intergenic 30.0%
TTTCCCAAAAAACTCAACTT+TGG - Chr3:99262100-99262119 MsG0380017661.01.T01:CDS 30.0%
! AGAAGACAAAGCATCATTAA+AGG - Chr3:99263990-99264009 MsG0380017661.01.T01:intron 30.0%
! TGGAATAGCTTTTCATTTTG+AGG - Chr3:99263231-99263250 MsG0380017661.01.T01:CDS 30.0%
!! AATGCTTCTAAGGATACTTT+TGG - Chr3:99263363-99263382 MsG0380017661.01.T01:intron 30.0%
!! TCTGTTTCTGCTATTATTTC+GGG + Chr3:99265045-99265064 None:intergenic 30.0%
!! TTTACATCAACCCATTTTTC+CGG - Chr3:99264798-99264817 MsG0380017661.01.T01:intron 30.0%
!!! AAACTTTTAAAGAGTGCCTA+AGG - Chr3:99262931-99262950 MsG0380017661.01.T01:CDS 30.0%
!!! AACTTTTAAAGAGTGCCTAA+GGG - Chr3:99262932-99262951 MsG0380017661.01.T01:CDS 30.0%
AAATTGCATGAGATGAGAAG+AGG + Chr3:99264781-99264800 None:intergenic 35.0%
AAGATCTACTATGCTACTCT+TGG - Chr3:99264332-99264351 MsG0380017661.01.T01:intron 35.0%
AATCGTGCTGAAACAAATTC+TGG - Chr3:99264739-99264758 MsG0380017661.01.T01:intron 35.0%
ACAATTTATGAGGTAGCATG+TGG - Chr3:99264448-99264467 MsG0380017661.01.T01:intron 35.0%
ACTCACAAAAAGAAACCTGA+TGG - Chr3:99264493-99264512 MsG0380017661.01.T01:intron 35.0%
AGATCTACTATGCTACTCTT+GGG - Chr3:99264333-99264352 MsG0380017661.01.T01:intron 35.0%
CAGAAAGATTGATCAAGTGA+AGG + Chr3:99265500-99265519 None:intergenic 35.0%
CTATGATAGAGCCCATATTA+GGG - Chr3:99262769-99262788 MsG0380017661.01.T01:CDS 35.0%
GGCAATTCTTTAATAGGAGT+AGG + Chr3:99264601-99264620 None:intergenic 35.0%
GGGATATCTTGCTCATTAAA+AGG + Chr3:99265171-99265190 None:intergenic 35.0%
GTAAAAATTACAGCTGGATG+AGG + Chr3:99262262-99262281 None:intergenic 35.0%
TACAAAATGTTGTCAAGCAG+TGG + Chr3:99262418-99262437 None:intergenic 35.0%
TACTTTATGGATGGTCAACT+TGG - Chr3:99263865-99263884 MsG0380017661.01.T01:intron 35.0%
TTAAAGAATCCCAGACAAAC+AGG - Chr3:99263334-99263353 MsG0380017661.01.T01:intron 35.0%
TTACAGAAGAAGGATCTGTT+TGG - Chr3:99263714-99263733 MsG0380017661.01.T01:intron 35.0%
! AAGACTTTGATAACCAGAGA+GGG - Chr3:99263556-99263575 MsG0380017661.01.T01:intron 35.0%
! ACACTGTGTTTAGTTCCATT+AGG + Chr3:99262130-99262149 None:intergenic 35.0%
! ATCGTTCCATTTTGCTTAGA+TGG - Chr3:99265460-99265479 MsG0380017661.01.T01:intron 35.0%
! CTCAACTTTGGAAATCCTAA+TGG - Chr3:99262112-99262131 MsG0380017661.01.T01:CDS 35.0%
! GTTCAATTTTGTGTAGGAGA+TGG - Chr3:99262011-99262030 MsG0380017661.01.T01:CDS 35.0%
! TTGAGGGTTCAATTTTGTGT+AGG - Chr3:99262005-99262024 MsG0380017661.01.T01:exon 35.0%
!! AGTATCCTTAGAAGCATTTC+AGG + Chr3:99263361-99263380 None:intergenic 35.0%
!! CATCTTATTTCTGTTGACTG+TGG - Chr3:99264631-99264650 MsG0380017661.01.T01:intron 35.0%
!! CTGTTTCTGCTATTATTTCG+GGG + Chr3:99265044-99265063 None:intergenic 35.0%
!! GTATCCTTAGAAGCATTTCA+GGG + Chr3:99263360-99263379 None:intergenic 35.0%
!! TTACATCAACCCATTTTTCC+GGG - Chr3:99264799-99264818 MsG0380017661.01.T01:intron 35.0%
!!! GAATGTCATTTTCCCTTGAT+GGG - Chr3:99263583-99263602 MsG0380017661.01.T01:intron 35.0%
!!! TGAATGTCATTTTCCCTTGA+TGG - Chr3:99263582-99263601 MsG0380017661.01.T01:intron 35.0%
AAAAAGAGTTGTGTTCTCGC+GGG - Chr3:99261790-99261809 MsG0380017661.01.T01:three_prime_UTR 40.0%
AATTGAGGGTCTCAAAGAAG+AGG - Chr3:99264975-99264994 MsG0380017661.01.T01:intron 40.0%
ACTGTTGTCAAGGTTTCATG+TGG - Chr3:99264259-99264278 MsG0380017661.01.T01:intron 40.0%
AGAATGGGAGAACATGTTAG+AGG - Chr3:99265230-99265249 MsG0380017661.01.T01:intron 40.0%
AGATGGCAGTGTATACTGTT+GGG - Chr3:99262028-99262047 MsG0380017661.01.T01:CDS 40.0%
AGATGGGTCTGTTGAAGAAT+TGG + Chr3:99263965-99263984 None:intergenic 40.0%
AGCAGACCATCTAAGCAAAA+TGG + Chr3:99265469-99265488 None:intergenic 40.0%
ATCATGCTTCTCAACAGACA+AGG - Chr3:99262686-99262705 MsG0380017661.01.T01:CDS 40.0%
ATCCCACAAGAAAGCAAAGA+AGG - Chr3:99264178-99264197 MsG0380017661.01.T01:intron 40.0%
ATGACATTCAAATCCCTCTC+TGG + Chr3:99263572-99263591 None:intergenic 40.0%
ATGCTTTCTAATGTGCCATC+AGG + Chr3:99264511-99264530 None:intergenic 40.0%
CAAAAAGAGTTGTGTTCTCG+CGG - Chr3:99261789-99261808 MsG0380017661.01.T01:three_prime_UTR 40.0%
CACAAGAAAGCAAAGAAGGT+GGG - Chr3:99264182-99264201 MsG0380017661.01.T01:intron 40.0%
CACAAGTGCAATGAAGTGAA+TGG - Chr3:99263486-99263505 MsG0380017661.01.T01:CDS 40.0%
CACCTTCTTTGCTTTCTTGT+GGG + Chr3:99264183-99264202 None:intergenic 40.0%
CAGATGATAGGAAGCTAGTT+AGG - Chr3:99265256-99265275 MsG0380017661.01.T01:CDS 40.0%
CCCTGTTTCAATGCAGAATT+CGG - Chr3:99265188-99265207 MsG0380017661.01.T01:intron 40.0%
CCGAATTCTGCATTGAAACA+GGG + Chr3:99265191-99265210 None:intergenic 40.0%
CCTAATATGGGCTCTATCAT+AGG + Chr3:99262771-99262790 None:intergenic 40.0%
CCTATGATAGAGCCCATATT+AGG - Chr3:99262768-99262787 MsG0380017661.01.T01:CDS 40.0%
CCTGTTTCAATGCAGAATTC+GGG - Chr3:99265189-99265208 MsG0380017661.01.T01:intron 40.0%
CGTTAGCAAGACCCTAATAT+GGG + Chr3:99262783-99262802 None:intergenic 40.0%
CTGTGTCCTTGACTACTTTA+TGG - Chr3:99263852-99263871 MsG0380017661.01.T01:intron 40.0%
CTTTGTCTTCTGCTTCAGAT+GGG + Chr3:99263981-99264000 None:intergenic 40.0%
GACCATCCATAAAGTAGTCA+AGG + Chr3:99263861-99263880 None:intergenic 40.0%
GACCCCCAGCTTATTATTAT+TGG - Chr3:99263017-99263036 MsG0380017661.01.T01:CDS 40.0%
GATCTACTATGCTACTCTTG+GGG - Chr3:99264334-99264353 MsG0380017661.01.T01:intron 40.0%
GATGGGTCTGTTGAAGAATT+GGG + Chr3:99263964-99263983 None:intergenic 40.0%
GCTAAGTAAGCAAGGAACTA+GGG + Chr3:99263920-99263939 None:intergenic 40.0%
GCTACCTCATAAATTGTCCA+AGG + Chr3:99264445-99264464 None:intergenic 40.0%
GTATCACACTCTTATGACTC+TGG - Chr3:99265528-99265547 MsG0380017661.01.T01:CDS 40.0%
GTCCTTGACTACTTTATGGA+TGG - Chr3:99263856-99263875 MsG0380017661.01.T01:intron 40.0%
GTCTCCTTGGACAATTTATG+AGG - Chr3:99264438-99264457 MsG0380017661.01.T01:intron 40.0%
TAGTGCTATAGACTCACATG+AGG - Chr3:99264306-99264325 MsG0380017661.01.T01:intron 40.0%
TAGTTCCTTGCTTACTTAGC+AGG - Chr3:99263920-99263939 MsG0380017661.01.T01:intron 40.0%
TATAACAGCCATGGCCAATT+AGG - Chr3:99264358-99264377 MsG0380017661.01.T01:intron 40.0%
TATATAGGCCTATAGCGCTA+TGG - Chr3:99262478-99262497 MsG0380017661.01.T01:CDS 40.0%
TCACACACTCTTCTTCTTAC+TGG - Chr3:99261890-99261909 MsG0380017661.01.T01:three_prime_UTR 40.0%
TCGTTAGCAAGACCCTAATA+TGG + Chr3:99262784-99262803 None:intergenic 40.0%
TCTGATGAGCAAGATAAGGT+CGG - Chr3:99265009-99265028 MsG0380017661.01.T01:intron 40.0%
TCTTGGGAATGGAAAGGAAA+TGG - Chr3:99264915-99264934 MsG0380017661.01.T01:intron 40.0%
TGAAACCTGCTAAGTAAGCA+AGG + Chr3:99263928-99263947 None:intergenic 40.0%
TGATAGGAAGCTAGTTAGGA+TGG - Chr3:99265260-99265279 MsG0380017661.01.T01:CDS 40.0%
TGCTAAGTAAGCAAGGAACT+AGG + Chr3:99263921-99263940 None:intergenic 40.0%
! AATGCAGAATTCGGGTTCAA+TGG - Chr3:99265197-99265216 MsG0380017661.01.T01:intron 40.0%
! ACATACTGTTGTTGTTGCTC+AGG - Chr3:99264849-99264868 MsG0380017661.01.T01:intron 40.0%
! ATCTTGTGTGATAGCTTGTC+GGG + Chr3:99261848-99261867 None:intergenic 40.0%
! CAAGACTTTGATAACCAGAG+AGG - Chr3:99263555-99263574 MsG0380017661.01.T01:intron 40.0%
! GATCTTGTGTGATAGCTTGT+CGG + Chr3:99261849-99261868 None:intergenic 40.0%
! TATCATAGTCTTGCTCTTGC+AGG - Chr3:99262178-99262197 MsG0380017661.01.T01:CDS 40.0%
! TTTTACCGTGACATGCTAAC+TGG - Chr3:99265288-99265307 MsG0380017661.01.T01:CDS 40.0%
!! AAAATAGTGGGTATTGCTGC+TGG - Chr3:99262151-99262170 MsG0380017661.01.T01:CDS 40.0%
!! AATCCTTAAAGAGTGCCCTA+AGG + Chr3:99262811-99262830 None:intergenic 40.0%
!! ATCCTTAAAGAGTGCCCTAA+GGG + Chr3:99262810-99262829 None:intergenic 40.0%
!! TAGCTCTGATGAGCAAGATA+AGG - Chr3:99265005-99265024 MsG0380017661.01.T01:intron 40.0%
!! TCTTTGAGACCCTCAATTGT+TGG + Chr3:99264973-99264992 None:intergenic 40.0%
!!! TCTAAGGATACTTTTGGAGC+AGG - Chr3:99263369-99263388 MsG0380017661.01.T01:intron 40.0%
AAATGCTAACGAGTGCCCTT+AGG + Chr3:99262950-99262969 None:intergenic 45.0%
AATATCGGCCATAGCGCTAT+AGG + Chr3:99262489-99262508 None:intergenic 45.0%
AGCCATGGCCAATTAGGTTT+GGG - Chr3:99264364-99264383 MsG0380017661.01.T01:intron 45.0%
AGTAAGCAGAGCAGTGTGAA+AGG + Chr3:99264476-99264495 None:intergenic 45.0%
AGTGTATACTGTTGGGGTAG+AGG - Chr3:99262035-99262054 MsG0380017661.01.T01:CDS 45.0%
ATGAGATGAGAAGAGGAGAG+AGG + Chr3:99264774-99264793 None:intergenic 45.0%
ATGTGTACTGTCAAAGCAGG+AGG - Chr3:99264103-99264122 MsG0380017661.01.T01:intron 45.0%
ATTTCAGGGCCTGTTTGTCT+GGG + Chr3:99263346-99263365 None:intergenic 45.0%
CAGATGTGTACTGTCAAAGC+AGG - Chr3:99264100-99264119 MsG0380017661.01.T01:intron 45.0%
CCACAAGAAAGCAAAGAAGG+TGG - Chr3:99264181-99264200 MsG0380017661.01.T01:intron 45.0%
CCACCTTCTTTGCTTTCTTG+TGG + Chr3:99264184-99264203 None:intergenic 45.0%
CCCGAATTCTGCATTGAAAC+AGG + Chr3:99265192-99265211 None:intergenic 45.0%
CGTGCTGAAACAAATTCTGG+TGG - Chr3:99264742-99264761 MsG0380017661.01.T01:intron 45.0%
CTCTGCAAATATGCAGTGTG+AGG + Chr3:99261954-99261973 None:intergenic 45.0%
CTTGCTAACGAGTTCCCTTA+GGG - Chr3:99262793-99262812 MsG0380017661.01.T01:CDS 45.0%
GAGATGGCAGTGTATACTGT+TGG - Chr3:99262027-99262046 MsG0380017661.01.T01:CDS 45.0%
GATGGCAGTGTATACTGTTG+GGG - Chr3:99262029-99262048 MsG0380017661.01.T01:CDS 45.0%
GATGTTTCCCCACATCCATA+GGG + Chr3:99264161-99264180 None:intergenic 45.0%
GCTTTGTCTTCTGCTTCAGA+TGG + Chr3:99263982-99264001 None:intergenic 45.0%
GTCCCGTTAAAGTTGTGTGT+GGG - Chr3:99264821-99264840 MsG0380017661.01.T01:intron 45.0%
GTTTCAGCACGATTAGCATC+AGG + Chr3:99264733-99264752 None:intergenic 45.0%
TCACACCAGTTAGCATGTCA+CGG + Chr3:99265296-99265315 None:intergenic 45.0%
TCCCGTTAAAGTTGTGTGTG+GGG - Chr3:99264822-99264841 MsG0380017661.01.T01:intron 45.0%
TCTTGCTAACGAGTTCCCTT+AGG - Chr3:99262792-99262811 MsG0380017661.01.T01:CDS 45.0%
TCTTGGGGTTATAACAGCCA+TGG - Chr3:99264349-99264368 MsG0380017661.01.T01:intron 45.0%
TGAAAATCCCAGACTGGTGT+TGG + Chr3:99264232-99264251 None:intergenic 45.0%
TGAGATGAGAAGAGGAGAGA+GGG + Chr3:99264773-99264792 None:intergenic 45.0%
TGGAGTTCTTGGGAATGGAA+AGG - Chr3:99264909-99264928 MsG0380017661.01.T01:intron 45.0%
TGTTAGAGGCAGCAGATGAT+AGG - Chr3:99265244-99265263 MsG0380017661.01.T01:CDS 45.0%
TGTTGGGGTAGAGGAATGTT+TGG - Chr3:99262044-99262063 MsG0380017661.01.T01:CDS 45.0%
TTAACGGGACCCGGAAAAAT+GGG + Chr3:99264811-99264830 None:intergenic 45.0%
TTGAGACCCTCAATTGTTGG+AGG + Chr3:99264970-99264989 None:intergenic 45.0%
TTTAACGGGACCCGGAAAAA+TGG + Chr3:99264812-99264831 None:intergenic 45.0%
TTTCACACCAACACCAGTCT+GGG - Chr3:99264222-99264241 MsG0380017661.01.T01:intron 45.0%
! AAGAGTGTGTGATTCACCAG+CGG + Chr3:99261882-99261901 None:intergenic 45.0%
! AAGTGTTGTGTCCTCAACTG+GGG - Chr3:99264666-99264685 MsG0380017661.01.T01:intron 45.0%
! ACAAGTGTTGTGTCCTCAAC+TGG - Chr3:99264664-99264683 MsG0380017661.01.T01:intron 45.0%
! ACTGTTGTTGTTGCTCAGGA+GGG - Chr3:99264853-99264872 MsG0380017661.01.T01:intron 45.0%
! CAAGTGTTGTGTCCTCAACT+GGG - Chr3:99264665-99264684 MsG0380017661.01.T01:intron 45.0%
! GCACATTAGAAAGCATGTGC+TGG - Chr3:99264515-99264534 MsG0380017661.01.T01:intron 45.0%
! GGAGTGTCTCCAATCTTTAG+AGG - Chr3:99265356-99265375 MsG0380017661.01.T01:intron 45.0%
! TACTGTTGTTGTTGCTCAGG+AGG - Chr3:99264852-99264871 MsG0380017661.01.T01:intron 45.0%
! TCTTGTGTGATAGCTTGTCG+GGG + Chr3:99261847-99261866 None:intergenic 45.0%
! TTCCCTTAGGGCACTCTTTA+AGG - Chr3:99262805-99262824 MsG0380017661.01.T01:CDS 45.0%
! TTGGCTTGAGTTCCCATCAA+GGG + Chr3:99263598-99263617 None:intergenic 45.0%
!! AAGAAGGATCTGTTTGGTGC+TGG - Chr3:99263720-99263739 MsG0380017661.01.T01:intron 45.0%
!! ACACCAGTCTGGGATTTTCA+CGG - Chr3:99264232-99264251 MsG0380017661.01.T01:intron 45.0%
!! AGAAGGATCTGTTTGGTGCT+GGG - Chr3:99263721-99263740 MsG0380017661.01.T01:intron 45.0%
!! GATGGTCAACTTGGTCTTAG+TGG - Chr3:99263874-99263893 MsG0380017661.01.T01:intron 45.0%
!! TCAACTTGGTCTTAGTGGAG+AGG - Chr3:99263879-99263898 MsG0380017661.01.T01:intron 45.0%
!! TTTGGCTTGAGTTCCCATCA+AGG + Chr3:99263599-99263618 None:intergenic 45.0%
!!! GGATACTTTTGGAGCAGGAA+TGG - Chr3:99263374-99263393 MsG0380017661.01.T01:intron 45.0%
!!! TACTTTTGGAGCAGGAATGG+TGG - Chr3:99263377-99263396 MsG0380017661.01.T01:intron 45.0%
!!! TTTTAAAAAAAATAGATTTT+GGG - Chr3:99263070-99263089 MsG0380017661.01.T01:CDS 5.0%
!!! TTTTTAAAAAAAATAGATTT+TGG - Chr3:99263069-99263088 MsG0380017661.01.T01:CDS 5.0%
AAACGAGCATGTCGTAGCTC+TGG - Chr3:99264282-99264301 MsG0380017661.01.T01:intron 50.0%
AACTGGGGATGTGTGGTCAT+GGG - Chr3:99264681-99264700 MsG0380017661.01.T01:intron 50.0%
AAGATCATTGACATCGCCGC+TGG - Chr3:99261863-99261882 MsG0380017661.01.T01:three_prime_UTR 50.0%
ACACTCCCACCATTGTTCTG+TGG - Chr3:99264944-99264963 MsG0380017661.01.T01:intron 50.0%
AGAGGAATGTTTGGACGGCT+TGG - Chr3:99262053-99262072 MsG0380017661.01.T01:CDS 50.0%
AGCAGGAGGAATGATGTCTC+TGG - Chr3:99264117-99264136 MsG0380017661.01.T01:intron 50.0%
AGGAGTGGAGTTCTTGGGAA+TGG - Chr3:99264904-99264923 MsG0380017661.01.T01:intron 50.0%
AGGGACATAAGGTGTGGTCT+TGG - Chr3:99264872-99264891 MsG0380017661.01.T01:intron 50.0%
CACACAACTTTAACGGGACC+CGG + Chr3:99264820-99264839 None:intergenic 50.0%
CAGCCATGGCCAATTAGGTT+TGG - Chr3:99264363-99264382 MsG0380017661.01.T01:intron 50.0%
CAGGCCCTGAAATGCTTCTA+AGG - Chr3:99263353-99263372 MsG0380017661.01.T01:intron 50.0%
CATTTCAGGGCCTGTTTGTC+TGG + Chr3:99263347-99263366 None:intergenic 50.0%
CCAAGGTGACTGCGTTGTTA+AGG - Chr3:99264054-99264073 MsG0380017661.01.T01:intron 50.0%
CCATGGCCAATTAGGTTTGG+GGG - Chr3:99264366-99264385 MsG0380017661.01.T01:intron 50.0%
CCTTAACAACGCAGTCACCT+TGG + Chr3:99264057-99264076 None:intergenic 50.0%
CGCCCCACACACAACTTTAA+CGG + Chr3:99264827-99264846 None:intergenic 50.0%
CGTTAAAGTTGTGTGTGGGG+CGG - Chr3:99264825-99264844 MsG0380017661.01.T01:intron 50.0%
CTGTGGCCTCCAACAATTGA+GGG - Chr3:99264961-99264980 MsG0380017661.01.T01:intron 50.0%
CTTCAGCTCATTCAACACCG+TGG + Chr3:99265079-99265098 None:intergenic 50.0%
CTTGGTGAGAATGGCCAACT+TGG - Chr3:99264547-99264566 MsG0380017661.01.T01:intron 50.0%
GAGAATGGCCAACTTGGACA+CGG - Chr3:99264553-99264572 MsG0380017661.01.T01:intron 50.0%
GAGGAATGTTTGGACGGCTT+GGG - Chr3:99262054-99262073 MsG0380017661.01.T01:CDS 50.0%
GCCAATTAGGTTTGGGGGAT+AGG - Chr3:99264371-99264390 MsG0380017661.01.T01:intron 50.0%
GCCATGGCCAATTAGGTTTG+GGG - Chr3:99264365-99264384 MsG0380017661.01.T01:intron 50.0%
GCCCCACACACAACTTTAAC+GGG + Chr3:99264826-99264845 None:intergenic 50.0%
GCCTATCCCCCAAACCTAAT+TGG + Chr3:99264375-99264394 None:intergenic 50.0%
GGATGTTTCCCCACATCCAT+AGG + Chr3:99264162-99264181 None:intergenic 50.0%
GGGACATAAGGTGTGGTCTT+GGG - Chr3:99264873-99264892 MsG0380017661.01.T01:intron 50.0%
GGGGTAGAGGAATGTTTGGA+CGG - Chr3:99262048-99262067 MsG0380017661.01.T01:CDS 50.0%
GGGTCTGTTGAAGAATTGGG+CGG + Chr3:99263961-99263980 None:intergenic 50.0%
GGTCCCGTTAAAGTTGTGTG+TGG - Chr3:99264820-99264839 MsG0380017661.01.T01:intron 50.0%
GTTTCACACCAACACCAGTC+TGG - Chr3:99264221-99264240 MsG0380017661.01.T01:intron 50.0%
TACTTGACGAGGAGTCTCCT+TGG - Chr3:99264425-99264444 MsG0380017661.01.T01:intron 50.0%
TCACGGTCGAACTGTTGTCA+AGG - Chr3:99264249-99264268 MsG0380017661.01.T01:intron 50.0%
TCTGTGGCCTCCAACAATTG+AGG - Chr3:99264960-99264979 MsG0380017661.01.T01:intron 50.0%
TGGTCATGGGGAATGGAGAA+GGG - Chr3:99264694-99264713 MsG0380017661.01.T01:intron 50.0%
TGTTGCTCAGGAGGGACATA+AGG - Chr3:99264861-99264880 MsG0380017661.01.T01:intron 50.0%
TGTTGGAGGCCACAGAACAA+TGG + Chr3:99264956-99264975 None:intergenic 50.0%
! ATAAGGTGTGGTCTTGGGGT+AGG - Chr3:99264878-99264897 MsG0380017661.01.T01:intron 50.0%
! ATGTTTGGACGGCTTGGGAA+TGG - Chr3:99262059-99262078 MsG0380017661.01.T01:CDS 50.0%
! CAAGTTGGCCATTCTCACCA+AGG + Chr3:99264549-99264568 None:intergenic 50.0%
! CTCTGGCTATTGATAACCGC+AGG - Chr3:99264134-99264153 MsG0380017661.01.T01:intron 50.0%
! GAAAGCATGTGCTGGACCTT+TGG - Chr3:99264523-99264542 MsG0380017661.01.T01:intron 50.0%
! GGACATAAGGTGTGGTCTTG+GGG - Chr3:99264874-99264893 MsG0380017661.01.T01:intron 50.0%
! TAAGGTGTGGTCTTGGGGTA+GGG - Chr3:99264879-99264898 MsG0380017661.01.T01:intron 50.0%
! TGTGATAGCTTGTCGGGGTT+CGG + Chr3:99261842-99261861 None:intergenic 50.0%
! TTGATAACCGCAGGACCCTA+TGG - Chr3:99264143-99264162 MsG0380017661.01.T01:intron 50.0%
!! ACCTTTGGCCTTGGTGAGAA+TGG - Chr3:99264538-99264557 MsG0380017661.01.T01:intron 50.0%
!! ACTTGGTCTTAGTGGAGAGG+AGG - Chr3:99263882-99263901 MsG0380017661.01.T01:intron 50.0%
!! GAAGGATCTGTTTGGTGCTG+GGG - Chr3:99263722-99263741 MsG0380017661.01.T01:intron 50.0%
AAGAGTTGTGTTCTCGCGGG+AGG - Chr3:99261793-99261812 MsG0380017661.01.T01:three_prime_UTR 55.0%
ACTGGGGATGTGTGGTCATG+GGG - Chr3:99264682-99264701 MsG0380017661.01.T01:intron 55.0%
AGGGGAAGGAGTGGAGTTCT+TGG - Chr3:99264898-99264917 MsG0380017661.01.T01:intron 55.0%
ATGTGCTGGACCTTTGGCCT+TGG - Chr3:99264529-99264548 MsG0380017661.01.T01:intron 55.0%
CAACTGGGGATGTGTGGTCA+TGG - Chr3:99264680-99264699 MsG0380017661.01.T01:intron 55.0%
CCCCCAAACCTAATTGGCCA+TGG + Chr3:99264369-99264388 None:intergenic 55.0%
CGACCGTGAAAATCCCAGAC+TGG + Chr3:99264238-99264257 None:intergenic 55.0%
CTCAGGAGGGACATAAGGTG+TGG - Chr3:99264866-99264885 MsG0380017661.01.T01:intron 55.0%
GCCATTCTCACCAAGGCCAA+AGG + Chr3:99264542-99264561 None:intergenic 55.0%
GCGTTGTTCCGTGTCCAAGT+TGG + Chr3:99264564-99264583 None:intergenic 55.0%
GGAGGCCACAGAACAATGGT+GGG + Chr3:99264952-99264971 None:intergenic 55.0%
GGATGTGTGGTCATGGGGAA+TGG - Chr3:99264687-99264706 MsG0380017661.01.T01:intron 55.0%
GGGGAAGGAGTGGAGTTCTT+GGG - Chr3:99264899-99264918 MsG0380017661.01.T01:intron 55.0%
GTCGGGGTTCGGATAACTTC+CGG + Chr3:99261831-99261850 None:intergenic 55.0%
GTGGTCATGGGGAATGGAGA+AGG - Chr3:99264693-99264712 MsG0380017661.01.T01:intron 55.0%
TGACCACACATCCCCAGTTG+AGG + Chr3:99264680-99264699 None:intergenic 55.0%
TGGAGGCCACAGAACAATGG+TGG + Chr3:99264953-99264972 None:intergenic 55.0%
TGGGGAATGGAGAAGGGTCT+TGG - Chr3:99264700-99264719 MsG0380017661.01.T01:intron 55.0%
TGTCCTCAACTGGGGATGTG+TGG - Chr3:99264674-99264693 MsG0380017661.01.T01:intron 55.0%
! AAGGTGTGGTCTTGGGGTAG+GGG - Chr3:99264880-99264899 MsG0380017661.01.T01:intron 55.0%
ACCGCAGGACCCTATGGATG+TGG - Chr3:99264149-99264168 MsG0380017661.01.T01:intron 60.0%
CCCACATCCATAGGGTCCTG+CGG + Chr3:99264153-99264172 None:intergenic 60.0%
CCGCAGGACCCTATGGATGT+GGG - Chr3:99264150-99264169 MsG0380017661.01.T01:intron 60.0%
CGCAGGACCCTATGGATGTG+GGG - Chr3:99264151-99264170 MsG0380017661.01.T01:intron 60.0%
GCGCTGTCAAGCGCAGATTG+CGG - Chr3:99262353-99262372 MsG0380017661.01.T01:CDS 60.0%
GTTTGGGGGATAGGCAGAGC+AGG - Chr3:99264380-99264399 MsG0380017661.01.T01:intron 60.0%
TCTTGGGGTAGGGGAAGGAG+TGG - Chr3:99264889-99264908 MsG0380017661.01.T01:intron 60.0%
TGTGTTCTCGCGGGAGGCAA+TGG - Chr3:99261799-99261818 MsG0380017661.01.T01:three_prime_UTR 60.0%
! TGTGGTCTTGGGGTAGGGGA+AGG - Chr3:99264884-99264903 MsG0380017661.01.T01:intron 60.0%
CGGGAGGCAATGGAAGACGC+CGG - Chr3:99261809-99261828 MsG0380017661.01.T01:three_prime_UTR 65.0%
Chromosome Type Strat End Strand Name
Chr3 gene 99261769 99265626 99261769 ID=MsG0380017661.01;Name=MsG0380017661.01
Chr3 mRNA 99261769 99265626 99261769 ID=MsG0380017661.01.T01;Parent=MsG0380017661.01;Name=MsG0380017661.01.T01;_AED=0.31;_eAED=0.31;_QI=49|0.66|0.5|1|1|1|4|237|557
Chr3 exon 99261769 99263292 99261769 ID=MsG0380017661.01.T01:exon:27288;Parent=MsG0380017661.01.T01
Chr3 exon 99263384 99263546 99263384 ID=MsG0380017661.01.T01:exon:27287;Parent=MsG0380017661.01.T01
Chr3 exon 99265239 99265368 99265239 ID=MsG0380017661.01.T01:exon:27286;Parent=MsG0380017661.01.T01
Chr3 exon 99265484 99265626 99265484 ID=MsG0380017661.01.T01:exon:27285;Parent=MsG0380017661.01.T01
Chr3 five_prime_UTR 99265578 99265626 99265578 ID=MsG0380017661.01.T01:five_prime_utr;Parent=MsG0380017661.01.T01
Chr3 CDS 99265484 99265577 99265484 ID=MsG0380017661.01.T01:cds;Parent=MsG0380017661.01.T01
Chr3 CDS 99265239 99265368 99265239 ID=MsG0380017661.01.T01:cds;Parent=MsG0380017661.01.T01
Chr3 CDS 99263384 99263546 99263384 ID=MsG0380017661.01.T01:cds;Parent=MsG0380017661.01.T01
Chr3 CDS 99262006 99263292 99262006 ID=MsG0380017661.01.T01:cds;Parent=MsG0380017661.01.T01
Chr3 three_prime_UTR 99261769 99262005 99261769 ID=MsG0380017661.01.T01:three_prime_utr;Parent=MsG0380017661.01.T01
Gene Sequence

>MsG0380017661.01.T01

ATGGAAGACGCCGGAAGTTATCCGAACCCCGACAAGCTATCACACAAGATCATTGACATCGCCGCTGGTGAATCACACACTCTTCTTCTTACTGGAGATGGCAGTGTATACTGTTGGGGTAGAGGAATGTTTGGACGGCTTGGGAATGGTTCTCAACAAGATGAACTTTTCCCAAAAAACTCAACTTTGGAAATCCTAATGGAACTAAACACAGTGTTAAAATATATCTGTGTCCTTGACTACTTTATGGATGGTCAACTTGGTCTTAGTGGAGAGGAGGACTCGCATGATTCCCTAGTTCCTTGCTTACTTAGCAGGTTTCATGAGTTGCAACCGCCCAATTCTTCAACAGACCCATCTGAAGCAGAAGACAAAGCATCATTAAAGATGTGTACTGTCAAAGCAGGAGGAATGATGTCTCTGGCTATTGATAACCGCAGGACCCTATGGATGTGGGGAAACATCCCACAAGAAAGCAAAGAAGGTGGGATATCTATTGTAAGCAGTTTCACACCAACACCAGTCTGGGATTTTCACGGTCGAACTGTTGTCAAGGTTTCATGTGGAAACGAGCATGTCGTAGCTCTGGTTAGTGCTATAGACTCACATGAGGATGAAGATCTACTATGCTACTCTTGGGGTTATAACAGCCATGGCCAATTAGGTTTGGGGGATAGGCAGAGCAGGCTGCGTCCAGAAGTTGTAAAAATACTTGACGAGGAGTCTCCTTGGACAATTTATGAGGTAGCATGTGGTGCCTTTCACACTGCTCTGCTTACTCACAAAAAGAAACCTGATGGCACATTAGAAAGCATGTGCTGGACCTTTGGCCTTGGTGAGAATGGCCAACTTGGACACGGAACAACGCAAAGCACTTTATTTCCTACTCCTATTAAAGAATTGCCACAAAGCATACATCTTATTTCTGTTGACTGTGGCTTGTTTCATACAAGTGTTGTGTCCTCAACTGGGGATGTGTGGTCATGGGGAATGGAGAAGGGTCTTGGCTTATGTCCTGATGCTAATCGTGCTGAAACAAATTCTGGTGGTGACGCCCTCTCTCCTCTTCTCATCTCATGCAATTTACATCAACCCATTTTTCCGGGTCCCGTTAAAGTTGTGTGTGGGGCGGCACATACTGTTGTTGTTGCTCAGGAGGGACATAAGGTGTGGTCTTGGGGTAGGGGAAGGAGTGGAGTTCTTGGGAATGGAAAGGAAATGGATAGTTACACTCCCACCATTGTTCTGTGGCCTCCAACAATTGAGGGTCTCAAAGAAGAGGAATTAAATAGCTCTGATGAGCAAGATAAGGTCGGAGAAAAAAACCCCGAAATAATAGCAGAAACAGATGAGAAATTATCCACGGTGTTGAATGAGCTGAAGCTGCTTCAAACAAAGCTATCTATAATGGAGAAATATGCTAGTATACTTCATGGTTCAATTTTTGGAAAACCTTTTAATGAGCAAGATATCCCTGTTTCAATGCAGAATTCGGGTTCAATGGATATTGCAAAAGAATGGGAGAACATGTTAGAGGCAGCAGATGATAGGAAGCTAGTTAGGATGGAAATGTTTTACCGTGACATGCTAACTGGTGTGAAAGATAAATTAATGAAGAGAAAGATCAAAGAAATTATAAAGGAGTGTCTCCAATCTTTAGAGGTAAATAAATAA

Protein sequence

>MsG0380017661.01.T01

MEDAGSYPNPDKLSHKIIDIAAGESHTLLLTGDGSVYCWGRGMFGRLGNGSQQDELFPKNSTLEILMELNTVLKYICVLDYFMDGQLGLSGEEDSHDSLVPCLLSRFHELQPPNSSTDPSEAEDKASLKMCTVKAGGMMSLAIDNRRTLWMWGNIPQESKEGGISIVSSFTPTPVWDFHGRTVVKVSCGNEHVVALVSAIDSHEDEDLLCYSWGYNSHGQLGLGDRQSRLRPEVVKILDEESPWTIYEVACGAFHTALLTHKKKPDGTLESMCWTFGLGENGQLGHGTTQSTLFPTPIKELPQSIHLISVDCGLFHTSVVSSTGDVWSWGMEKGLGLCPDANRAETNSGGDALSPLLISCNLHQPIFPGPVKVVCGAAHTVVVAQEGHKVWSWGRGRSGVLGNGKEMDSYTPTIVLWPPTIEGLKEEELNSSDEQDKVGEKNPEIIAETDEKLSTVLNELKLLQTKLSIMEKYASILHGSIFGKPFNEQDIPVSMQNSGSMDIAKEWENMLEAADDRKLVRMEMFYRDMLTGVKDKLMKRKIKEIIKECLQSLEVNK*