AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680035731.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680035731.01.T01 MTR_6g088270 93.797 1064 49 3 1 1057 1 1054 0.0 1943
MsG0680035731.01.T01 MTR_6g087300 56.658 383 85 5 653 1029 50 357 1.45e-117 366
MsG0680035731.01.T01 MTR_6g087300 50.000 182 62 1 608 789 206 358 2.01e-46 171
MsG0680035731.01.T01 MTR_6g087270 67.808 292 34 3 1 292 1 232 2.01e-116 358
MsG0680035731.01.T01 MTR_2g039780 76.163 172 25 3 887 1057 60 216 2.63e-73 242
MsG0680035731.01.T01 MTR_2g039780 55.758 165 57 3 649 812 63 212 5.11e-49 173
MsG0680035731.01.T01 MTR_6g088250 54.676 278 70 8 449 692 1086 1341 3.23e-66 244
MsG0680035731.01.T01 MTR_6g088250 68.182 110 35 0 825 934 1233 1342 1.09e-37 154
MsG0680035731.01.T01 MTR_6g084360 75.301 166 12 1 884 1049 973 1109 7.51e-66 242
MsG0680035731.01.T01 MTR_6g084360 51.590 283 68 4 525 806 893 1107 2.88e-65 240
MsG0680035731.01.T01 MTR_6g027070 74.342 152 20 1 611 762 12 144 2.63e-63 211
MsG0680035731.01.T01 MTR_6g027070 57.962 157 47 2 846 1002 6 143 2.41e-47 166
MsG0680035731.01.T01 MTR_0428s0020 57.732 194 27 3 847 1040 38 176 9.32e-53 184
MsG0680035731.01.T01 MTR_0428s0020 38.380 284 82 6 600 881 30 222 9.36e-43 155
MsG0680035731.01.T01 MTR_6g088240 56.383 188 65 3 870 1045 1 183 1.19e-51 179
MsG0680035731.01.T01 MTR_6g088240 48.649 185 84 4 629 804 1 183 9.71e-44 157
MsG0680035731.01.T01 MTR_2g039790 79.279 111 10 1 847 957 15 112 1.90e-49 172
MsG0680035731.01.T01 MTR_2g039790 59.649 114 33 1 608 721 17 117 6.58e-37 136
MsG0680035731.01.T01 MTR_6g488290 56.354 181 24 3 847 1027 38 163 7.68e-47 166
MsG0680035731.01.T01 MTR_6g488290 42.328 189 52 4 600 786 30 163 2.22e-31 122
MsG0680035731.01.T01 MTR_6g488300 43.333 330 104 12 370 674 1063 1334 3.41e-44 175
MsG0680035731.01.T01 MTR_0428s0030 41.786 280 97 9 406 674 1164 1388 4.31e-39 159
MsG0680035731.01.T01 MTR_6g066260 73.750 80 21 0 655 734 18 97 8.72e-32 120
MsG0680035731.01.T01 MTR_6g066260 50.526 95 47 0 881 975 3 97 6.37e-24 97.4
MsG0680035731.01.T01 MTR_6g087200 75.610 82 10 1 672 753 1033 1104 6.12e-28 122
MsG0680035731.01.T01 MTR_6g087200 53.659 82 28 1 913 994 1033 1104 1.52e-18 92.0
MsG0680035731.01.T01 MTR_6g088260 52.047 171 33 9 449 610 1085 1215 2.21e-24 111
MsG0680035731.01.T01 MTR_6g087320 42.857 175 54 4 416 583 1185 1320 2.27e-20 98.2
MsG0680035731.01.T01 MTR_6g087320 47.904 167 24 9 452 610 1356 1467 2.72e-18 91.7
MsG0680035731.01.T01 MTR_0428s0040 48.193 166 23 9 452 609 48 158 1.13e-19 88.2
MsG0680035731.01.T01 MTR_6g003970 48.387 93 47 1 857 949 31 122 4.25e-16 81.6
MsG0680035731.01.T01 MTR_6g003970 32.124 193 92 6 607 798 22 176 1.29e-15 80.1
MsG0680035731.01.T01 MTR_6g003970 28.402 169 103 6 663 820 181 342 6.39e-12 68.9
MsG0680035731.01.T01 MTR_6g088250 52.381 105 26 3 449 546 1086 1173 1.70e-15 82.4
MsG0680035731.01.T01 MTR_6g087190 79.487 39 8 0 901 939 15 53 1.07e-14 70.1
MsG0680035731.01.T01 MTR_6g081090 87.179 39 5 0 847 885 5 43 1.11e-13 69.3
MsG0680035731.01.T01 MTR_2g039770 51.042 96 37 4 369 458 1163 1254 6.43e-13 73.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680035731.01.T01 AT4G29060 56.505 1053 350 19 1 1047 1 951 0.0 1008
MsG0680035731.01.T01 AT4G29060 68.067 238 74 1 818 1053 482 719 2.64e-95 325
MsG0680035731.01.T01 AT4G29060 48.399 812 308 22 1 806 1 707 0.0 623
MsG0680035731.01.T01 AT4G29060 70.690 232 60 2 818 1047 482 707 6.10e-97 323
MsG0680035731.01.T01 AT4G11120 50.538 93 43 2 856 948 76 165 3.20e-16 82.8
MsG0680035731.01.T01 AT4G11120 43.478 92 51 1 615 706 76 166 2.12e-14 77.0
MsG0680035731.01.T01 AT4G11120 29.605 152 99 3 665 810 234 383 3.71e-12 70.1

Find 242 sgRNAs with CRISPR-Local

Find 358 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTCAGTGGCAGGACTTTC+AGG 0.148977 6:+111300653 None:intergenic
CCTGTTGCCAATGAAGTTTC+TGG 0.152029 6:-111302337 MsG0680035731.01.T01:CDS
TCCGACAGAGCATGATATTA+TGG 0.209544 6:+111302597 None:intergenic
CATTTATAATACTTCCTTCT+TGG 0.224050 6:+111301411 None:intergenic
TTCCGTTTCTGTGGCTGATA+TGG 0.247171 6:+111302384 None:intergenic
GTTATTCTTTCTTGTCAAAT+AGG 0.268125 6:+111302549 None:intergenic
TTCCTTCGTCACAATAGTTT+CGG 0.269335 6:+111298019 None:intergenic
CTTCGAAACCCGAGAACATT+AGG 0.279500 6:-111297965 MsG0680035731.01.T01:CDS
GATAATGGGAAAATCTTCTT+TGG 0.285488 6:-111301720 MsG0680035731.01.T01:CDS
GAGGAAGATGACGATGGATT+TGG 0.287722 6:-111301746 MsG0680035731.01.T01:CDS
ACACTGTCATCCTTAATAAA+AGG 0.290111 6:+111297882 None:intergenic
GCAAGCATACCTCAGGAAAA+AGG 0.290284 6:-111298255 MsG0680035731.01.T01:CDS
TCCTTCAGCTGCCAGTCTTC+CGG 0.299109 6:+111298208 None:intergenic
CGATGGATTTGGGAAGATAA+TGG 0.301730 6:-111301735 MsG0680035731.01.T01:CDS
ACCAAATCCTCATTCTTTAC+AGG 0.301884 6:+111302199 None:intergenic
CCGACAGAGCATGATATTAT+GGG 0.306224 6:+111302598 None:intergenic
CCTTGCAGGTCTTGAACGTT+TGG 0.306637 6:+111302237 None:intergenic
AACAGCTCCTTCCTTCTTCA+TGG 0.308813 6:+111301637 None:intergenic
TTTGGTGCGTTTGTTGATTT+CGG 0.315228 6:-111302133 MsG0680035731.01.T01:CDS
TCTTTCCTTGGACCCGATTT+CGG 0.321232 6:+111301887 None:intergenic
CAGTAACAACGTACTCTACT+TGG 0.333022 6:+111299708 None:intergenic
TGACAGCAGGATCGGTGTTT+TGG 0.339026 6:-111299822 MsG0680035731.01.T01:CDS
TCCTGTAAAGAATGAGGATT+TGG 0.339661 6:-111302200 MsG0680035731.01.T01:CDS
GGAAGGAGCTGTTGCAGAAT+TGG 0.340077 6:-111301627 MsG0680035731.01.T01:CDS
GTTCAACCTCGGAGAGGGTT+TGG 0.342209 6:-111299444 MsG0680035731.01.T01:CDS
CAAGAAGGAAGTATTATAAA+TGG 0.345251 6:-111301410 MsG0680035731.01.T01:CDS
GTCTCAAGTGTTGTGTCTCT+TGG 0.346040 6:-111302052 MsG0680035731.01.T01:CDS
GGAAAATCTTCTTTGGAGAT+TGG 0.353117 6:-111301713 MsG0680035731.01.T01:CDS
AAGAATGAGGATTTGGTTCC+CGG 0.354645 6:-111302193 MsG0680035731.01.T01:CDS
GGAAATTCTTCGGTTATTCC+TGG 0.356752 6:-111302577 MsG0680035731.01.T01:CDS
CACAAAATTTGTTGTAGGTC+AGG 0.358049 6:-111301855 MsG0680035731.01.T01:CDS
TCCTTCGTCACAATAGTTTC+GGG 0.358591 6:+111298020 None:intergenic
CTTGTTCCAACTTCATTTGA+AGG 0.363120 6:+111302307 None:intergenic
TCTTTCACTGGAGTAGTTAC+CGG 0.365022 6:+111299368 None:intergenic
ATCTCTGATTCTGTAACAAC+AGG 0.365365 6:+111301098 None:intergenic
AGAGGCGGTTGCTGAAAGTT+TGG 0.370006 6:-111301369 MsG0680035731.01.T01:CDS
TCTAAGGAGCTCTTGTGCTT+TGG 0.371836 6:+111299919 None:intergenic
TCCTTGGCTTCTGCGGCAGC+AGG 0.372285 6:+111299341 None:intergenic
CACTTTATCATTCTTGATGT+AGG 0.372974 6:+111299538 None:intergenic
AGGAAGATGACGATGGATTT+GGG 0.384366 6:-111301745 MsG0680035731.01.T01:CDS
AAGCAGACAATTGCAACTAT+TGG 0.386183 6:-111299497 MsG0680035731.01.T01:CDS
CCTTCCTTCGGCAGTTGCTC+TGG 0.387279 6:+111299862 None:intergenic
TCTTCAACTTGTGCTGATAC+AGG 0.393393 6:+111300614 None:intergenic
ATGCGTGAAAACACTGATAC+TGG 0.393930 6:-111301968 MsG0680035731.01.T01:CDS
CTACGAAAAGCCAATACAAA+AGG 0.395148 6:+111301563 None:intergenic
GAGGTGGGATTCTCCGAAAT+CGG 0.402919 6:-111301900 MsG0680035731.01.T01:CDS
TAAAGTGACAGTAAAGGATA+TGG 0.403790 6:-111299522 MsG0680035731.01.T01:CDS
CCTTTATTCAAGCTTTCCTC+AGG 0.405283 6:+111300826 None:intergenic
ACTTTATCATTCTTGATGTA+GGG 0.407592 6:+111299539 None:intergenic
TTCAGGAGAGGGAAGTTGAT+TGG 0.408068 6:+111300670 None:intergenic
CTGTACCAGCATAGCTTACA+AGG 0.414442 6:-111297752 MsG0680035731.01.T01:exon
AGAAATCCTTCCTCTCCTTC+AGG 0.415362 6:+111301779 None:intergenic
AAGCAACTTCGGGACGAAAC+AGG 0.415386 6:-111299995 MsG0680035731.01.T01:CDS
TGTTGTAGGTCAGGAGTTGC+AGG 0.415982 6:-111301846 MsG0680035731.01.T01:CDS
TTTCCTTCATTTGTCGCCAA+TGG 0.416640 6:-111302460 MsG0680035731.01.T01:CDS
TTACTTTGGTTCAGTCTCCT+TGG 0.419163 6:+111299325 None:intergenic
AGCACCTTATCTAACTCTAA+TGG 0.420649 6:-111300560 MsG0680035731.01.T01:CDS
GATGGATTTGGGAAGATAAT+GGG 0.421467 6:-111301734 MsG0680035731.01.T01:CDS
CTTTCATCAGCCACGTCAAC+CGG 0.421811 6:+111301257 None:intergenic
TCTTGCACCTCTTCAGTGGC+AGG 0.429761 6:+111300644 None:intergenic
ATTTGATCAGCCACTTCAAC+CGG 0.430618 6:+111301215 None:intergenic
AATGCAGAGAAATCCGGCTC+TGG 0.431146 6:-111301923 MsG0680035731.01.T01:CDS
ACTCCTTGAAAAGTTGAGTC+TGG 0.432066 6:+111302519 None:intergenic
GTAAAATCTATCCAACCATT+TGG 0.434906 6:-111302151 MsG0680035731.01.T01:CDS
AGAAATCCGGCTCTGGGAGG+TGG 0.435137 6:-111301916 MsG0680035731.01.T01:CDS
TGCACAAACTACAGCAAAAC+CGG 0.435471 6:-111299387 MsG0680035731.01.T01:CDS
ATAATAACCAAATGTTGATT+AGG 0.436831 6:-111297643 MsG0680035731.01.T01:three_prime_UTR
CCTGGTGTTTCTTGAGGAGC+TGG 0.437084 6:+111301062 None:intergenic
TTCTTTCTTCACGAATTCCT+CGG 0.440757 6:+111299676 None:intergenic
TTATAGTGAAAGACTTGGTT+AGG 0.442018 6:-111297860 MsG0680035731.01.T01:CDS
GCAGCAGGCTCCTCTTTCAC+TGG 0.443676 6:+111299356 None:intergenic
TCTAACTCTAATGGACAAAC+TGG 0.444131 6:-111300551 MsG0680035731.01.T01:CDS
GAAAACCTTGTAAGCTATGC+TGG 0.445394 6:+111297747 None:intergenic
CCAGAAACTTCATTGGCAAC+AGG 0.445959 6:+111302337 None:intergenic
ACTCCATTGGCGACAAATGA+AGG 0.446283 6:+111302457 None:intergenic
ACTGATCTGTATCTGTATTG+AGG 0.453212 6:-111297606 MsG0680035731.01.T01:three_prime_UTR
TCGTCATCTTCCTCAGCTAA+TGG 0.453821 6:+111301755 None:intergenic
GCCTGCTGCCGCAGAAGCCA+AGG 0.455636 6:-111299342 MsG0680035731.01.T01:CDS
ATGCTCTGTCGGAAATTCTT+CGG 0.455804 6:-111302587 MsG0680035731.01.T01:CDS
TTCGAAACCCGAGAACATTA+GGG 0.457197 6:-111297964 MsG0680035731.01.T01:CDS
GGAAGAATCTCAAAGAGGTT+AGG 0.459157 6:-111297927 MsG0680035731.01.T01:CDS
AGGCAAAGTATAGCTGCTAT+TGG 0.460091 6:-111297840 MsG0680035731.01.T01:CDS
AGAAGATCTTGCGTCAAAAC+CGG 0.460563 6:-111299633 MsG0680035731.01.T01:CDS
GAATCTCCTTCAAATGAAGT+TGG 0.462432 6:-111302313 MsG0680035731.01.T01:CDS
AGGTGGGATTCTCCGAAATC+GGG 0.464270 6:-111301899 MsG0680035731.01.T01:CDS
AGATTCACCAGAAACTTCAT+TGG 0.465353 6:+111302330 None:intergenic
CCTGAGGAAAGCTTGAATAA+AGG 0.465580 6:-111300826 MsG0680035731.01.T01:intron
CGAAGTTGCTTCACAAGTGC+TGG 0.465644 6:+111300007 None:intergenic
AACTGCATCATTATCTTCCT+CGG 0.465955 6:+111301130 None:intergenic
GGCATTACTGCTTCAGATGA+AGG 0.466224 6:-111300530 MsG0680035731.01.T01:CDS
TGAAAGTTACAAGGTTTGTT+CGG 0.466730 6:-111299466 MsG0680035731.01.T01:CDS
AGTAGTGGTCTCAGCCGCTT+TGG 0.466995 6:-111298363 MsG0680035731.01.T01:CDS
GTCCGCGCCTAATCAACATT+TGG 0.467669 6:+111297636 None:intergenic
AGAAACCGGTGCAGGGATGA+TGG 0.468491 6:-111298324 MsG0680035731.01.T01:CDS
CAGCACTTGTGAAGCAACTT+CGG 0.472018 6:-111300006 MsG0680035731.01.T01:CDS
TGATAAGAAATCCGGAAGAC+TGG 0.475292 6:-111298219 MsG0680035731.01.T01:CDS
ATCCTTGATCTAATTTGCTC+CGG 0.478542 6:+111299614 None:intergenic
CGAAACAGGAGCTGGAATGA+TGG 0.479672 6:-111299981 MsG0680035731.01.T01:CDS
ACAAGCGAATATGCTCTTAC+CGG 0.485263 6:-111302423 MsG0680035731.01.T01:CDS
TGTTGATTTCGGAGCTTTCA+CGG 0.487404 6:-111302122 MsG0680035731.01.T01:CDS
TCGAACAATGCAGAGAAATC+CGG 0.493006 6:-111301929 MsG0680035731.01.T01:CDS
GTAAGAACCTATCCTTCCTT+CGG 0.495021 6:+111299850 None:intergenic
AACTGAAGGTGATCTTGAAA+AGG 0.495747 6:-111298279 MsG0680035731.01.T01:CDS
TTTCCCCGTAAAAGCTGCCC+CGG 0.497340 6:+111302174 None:intergenic
ATTAGATCAAGGATTGTTGA+AGG 0.498357 6:-111299605 MsG0680035731.01.T01:CDS
GCAAGTTGCTGCTTGTCCAC+AGG 0.499547 6:-111298069 MsG0680035731.01.T01:CDS
AGAAACTGTGGAAGATTCAC+TGG 0.500295 6:-111301471 MsG0680035731.01.T01:CDS
GATAATGATGCAGTTGAGCC+TGG 0.500373 6:-111301122 MsG0680035731.01.T01:CDS
CGATTCCTCGACAACTGTTG+TGG 0.502643 6:-111301447 MsG0680035731.01.T01:CDS
AAACACCGATCCTGCTGTCA+TGG 0.503436 6:+111299825 None:intergenic
TTCCATATCAGCCACAGAAA+CGG 0.506507 6:-111302386 MsG0680035731.01.T01:CDS
TCTTTCTTCACGAATTCCTC+GGG 0.506603 6:+111299677 None:intergenic
CTCACTTCTGCCAACAAAGT+CGG 0.506846 6:+111298124 None:intergenic
AGTAACAACGTACTCTACTT+GGG 0.507202 6:+111299709 None:intergenic
CTTGTCAAATAGGCAACTCC+AGG 0.508349 6:+111302559 None:intergenic
TACGAAAAGCCAATACAAAA+GGG 0.522460 6:+111301564 None:intergenic
AAATCAACAAACGCACCAAA+TGG 0.523061 6:+111302136 None:intergenic
CCCATAATATCATGCTCTGT+CGG 0.523123 6:-111302598 MsG0680035731.01.T01:CDS
GGCTTTCGTAGAACCAGTGT+TGG 0.523954 6:+111302258 None:intergenic
GATTCTGTAACAACAGGGCC+AGG 0.526402 6:+111301104 None:intergenic
TGGCAGAAGTGAGAAATTCA+AGG 0.527151 6:-111298114 MsG0680035731.01.T01:CDS
AACCGGAGCAAATTAGATCA+AGG 0.527437 6:-111299616 MsG0680035731.01.T01:CDS
AAGTGAGAAATTCAAGGAGT+TGG 0.528224 6:-111298108 MsG0680035731.01.T01:CDS
TATAAATGGTGCCGCTGAGA+AGG 0.528405 6:-111301396 MsG0680035731.01.T01:CDS
CCAGTGTTGGCATCAGACTT+AGG 0.528888 6:+111302271 None:intergenic
TCATCCGCTGATAAGAAATC+CGG 0.529747 6:-111298227 MsG0680035731.01.T01:CDS
AGCACTTGTGAAGCAACTTC+GGG 0.530877 6:-111300005 MsG0680035731.01.T01:CDS
AGAATCCCACCTCCCAGAGC+CGG 0.531201 6:+111301910 None:intergenic
AACTGACTCACCGGTTGAAG+TGG 0.534688 6:-111301225 MsG0680035731.01.T01:CDS
GTCTCTTGGACAAGAAGTTA+CGG 0.535794 6:-111302038 MsG0680035731.01.T01:CDS
CTTTATTCAAGCTTTCCTCA+GGG 0.535989 6:+111300827 None:intergenic
TTGTCCATTAGAGTTAGATA+AGG 0.536309 6:+111300556 None:intergenic
TGTTCTCGGGTTTCGAAGCA+AGG 0.537039 6:+111297970 None:intergenic
CTACGAGAAGAAACCGGTGC+AGG 0.539828 6:-111298332 MsG0680035731.01.T01:CDS
CAACAAACGCACCAAATGGT+TGG 0.540062 6:+111302140 None:intergenic
TACATTCACGATGCACGCAT+TGG 0.540085 6:-111298173 MsG0680035731.01.T01:CDS
CAAGAACCTGGTGTTTCTTG+AGG 0.540517 6:+111301056 None:intergenic
GGGGCACGCAGCCACTTGCA+TGG 0.540689 6:+111299730 None:intergenic
AACTGTGAAACCGACTTTGT+TGG 0.542867 6:-111298134 MsG0680035731.01.T01:CDS
GAGAAAATATGAAAGTTACA+AGG 0.544236 6:-111299475 MsG0680035731.01.T01:CDS
AAGCAACTACGAGAAGAAAC+CGG 0.544505 6:-111298338 MsG0680035731.01.T01:CDS
CTGGCAGCTGAAGGAAGAAT+CGG 0.544679 6:-111298200 MsG0680035731.01.T01:CDS
CTTCGGGACGAAACAGGAGC+TGG 0.545385 6:-111299989 MsG0680035731.01.T01:CDS
TCAGATGAAGGATCGAGTAA+AGG 0.545714 6:-111300518 MsG0680035731.01.T01:intron
AAAAGGCGCAAGCATACCTC+AGG 0.548541 6:-111298262 MsG0680035731.01.T01:CDS
CACGGATACTTCCGTTTCTG+TGG 0.549084 6:+111302375 None:intergenic
ATTTCTTATCAGCGGATGAG+AGG 0.549418 6:+111298231 None:intergenic
ATGCAGAGAAATCCGGCTCT+GGG 0.550324 6:-111301922 MsG0680035731.01.T01:CDS
GTGGCAGGACTTTCAGGAGA+GGG 0.550624 6:+111300659 None:intergenic
GTTCGGTTCAACCTCGGAGA+GGG 0.551728 6:-111299449 MsG0680035731.01.T01:CDS
AGCGACATTGACCATGAAGA+AGG 0.553562 6:-111301648 MsG0680035731.01.T01:CDS
GGTAACTACTCCAGTGAAAG+AGG 0.553754 6:-111299366 MsG0680035731.01.T01:CDS
GCAGCCAGAGCAACTGCCGA+AGG 0.554999 6:-111299866 MsG0680035731.01.T01:CDS
ATCACCTTCAGTTTCAGCAA+GGG 0.556148 6:+111298289 None:intergenic
CAAGGAGTTCTTTAAGACAC+GGG 0.556289 6:-111302504 MsG0680035731.01.T01:CDS
GGACAAGGCACTTGCACAAG+TGG 0.557097 6:-111301606 MsG0680035731.01.T01:CDS
CCAGAGCAACTGCCGAAGGA+AGG 0.558061 6:-111299862 MsG0680035731.01.T01:CDS
AACTGACTCACCGGTTGACG+TGG 0.558529 6:-111301267 MsG0680035731.01.T01:CDS
TACATCCATGACAGCAGGAT+CGG 0.561063 6:-111299830 MsG0680035731.01.T01:CDS
ATTCTCCGAAATCGGGTCCA+AGG 0.561858 6:-111301892 MsG0680035731.01.T01:CDS
GTTCTTACATCCATGACAGC+AGG 0.562189 6:-111299835 MsG0680035731.01.T01:CDS
GAATGATAAAGTGACAGTAA+AGG 0.564402 6:-111299528 MsG0680035731.01.T01:CDS
TGAAAGTCCTGCCACTGAAG+AGG 0.565352 6:-111300651 MsG0680035731.01.T01:CDS
TTTAATAGAAACTGACTCAC+CGG 0.565786 6:-111301234 MsG0680035731.01.T01:CDS
AGAATGAGGATTTGGTTCCC+GGG 0.569157 6:-111302192 MsG0680035731.01.T01:CDS
GAAATCCGGCTCTGGGAGGT+GGG 0.570627 6:-111301915 MsG0680035731.01.T01:CDS
TTGTTCTTGCACCTCTTCAG+TGG 0.570826 6:+111300640 None:intergenic
AGGTCAGGAGTTGCAGGGTA+CGG 0.571288 6:-111301840 MsG0680035731.01.T01:CDS
GGATTGTTGAAGGACGGATA+AGG 0.572423 6:-111299595 MsG0680035731.01.T01:CDS
GATCAAGGATTGTTGAAGGA+CGG 0.572700 6:-111299601 MsG0680035731.01.T01:CDS
ACAGTCCATCATCCCTGCAC+CGG 0.573161 6:+111298319 None:intergenic
GTTGAGTGATAGCTTTGTAA+AGG 0.577562 6:-111302077 MsG0680035731.01.T01:CDS
CAACGTTGAAACTGACTCAC+CGG 0.581016 6:-111301276 MsG0680035731.01.T01:CDS
GCAACTGCCGAAGGAAGGAT+AGG 0.582552 6:-111299857 MsG0680035731.01.T01:CDS
TCACTTCCTGAAGGAGAGGA+AGG 0.585290 6:-111301785 MsG0680035731.01.T01:CDS
TCCGGAAGACTGGCAGCTGA+AGG 0.588358 6:-111298209 MsG0680035731.01.T01:CDS
TATATCACTTCCTGAAGGAG+AGG 0.589228 6:-111301789 MsG0680035731.01.T01:CDS
CCTAAGTCTGATGCCAACAC+TGG 0.589932 6:-111302271 MsG0680035731.01.T01:CDS
GAGCATATTCGCTTGTTCTG+AGG 0.590286 6:+111302430 None:intergenic
GTAACAACGTACTCTACTTG+GGG 0.590504 6:+111299710 None:intergenic
GTGCAGGAAATCAGCAGTAG+TGG 0.596207 6:-111298378 MsG0680035731.01.T01:intron
GGGTTTGGAAAAGAAAAGCG+AGG 0.599000 6:-111299429 MsG0680035731.01.T01:CDS
GAATGAGGATTTGGTTCCCG+GGG 0.599120 6:-111302191 MsG0680035731.01.T01:CDS
AATGCTCTTTCTGAAAGTGA+AGG 0.599535 6:-111299950 MsG0680035731.01.T01:CDS
CAGTGTTATAGTGAAAGACT+TGG 0.599905 6:-111297865 MsG0680035731.01.T01:CDS
AGCGTCCACAACAGTTGTCG+AGG 0.600792 6:+111301442 None:intergenic
TTCAGTCTCCTTGGCTTCTG+CGG 0.601937 6:+111299334 None:intergenic
TCAAGGAGTTCTTTAAGACA+CGG 0.602455 6:-111302505 MsG0680035731.01.T01:CDS
TGCTGTAAATTCAATTATCG+AGG 0.603012 6:-111301327 MsG0680035731.01.T01:CDS
TGAAGCAGTTGCAATTGCAT+CGG 0.603597 6:-111300591 MsG0680035731.01.T01:CDS
TCCCGAAACTATTGTGACGA+AGG 0.603689 6:-111298021 MsG0680035731.01.T01:CDS
AGGTTTGTTCGGTTCAACCT+CGG 0.604002 6:-111299455 MsG0680035731.01.T01:CDS
AAATCCTCATTCTTTACAGG+AGG 0.604341 6:+111302202 None:intergenic
AATGCCTCCTGTAAAGAATG+AGG 0.604427 6:-111302206 MsG0680035731.01.T01:CDS
GTTGTAGGTCAGGAGTTGCA+GGG 0.609211 6:-111301845 MsG0680035731.01.T01:CDS
ATCAGAAACTGACAATGGAA+AGG 0.610096 6:-111301171 MsG0680035731.01.T01:CDS
ACATTGACCATGAAGAAGGA+AGG 0.610935 6:-111301644 MsG0680035731.01.T01:CDS
GACGCTGAAAGCAACCAAGA+AGG 0.613970 6:-111301425 MsG0680035731.01.T01:CDS
AAAGCCCTTGCTGAAACTGA+AGG 0.615327 6:-111298293 MsG0680035731.01.T01:CDS
ATAGATACAAACTGAACCTG+TGG 0.617602 6:+111298053 None:intergenic
AGGATTTCTACCATTAGCTG+AGG 0.618726 6:-111301765 MsG0680035731.01.T01:CDS
AGAATTTGTAGCTGCAACCG+AGG 0.619096 6:-111301147 MsG0680035731.01.T01:CDS
TAAGACACGGGTCATCAACT+CGG 0.619669 6:-111302492 MsG0680035731.01.T01:CDS
ATCATCAACTACAGAAACTG+TGG 0.620439 6:-111301483 MsG0680035731.01.T01:CDS
TACGAGAAGAAACCGGTGCA+GGG 0.620957 6:-111298331 MsG0680035731.01.T01:CDS
GATCACCTTCAGTTTCAGCA+AGG 0.621026 6:+111298288 None:intergenic
GATTTCGGAGCTTTCACGGA+CGG 0.623504 6:-111302118 MsG0680035731.01.T01:CDS
AACCAAATGTTGATTAGGCG+CGG 0.623982 6:-111297638 MsG0680035731.01.T01:three_prime_UTR
CATTAGGGAGAAAATTGTCG+AGG 0.625066 6:-111297949 MsG0680035731.01.T01:CDS
TTCCCCGTAAAAGCTGCCCC+GGG 0.627643 6:+111302175 None:intergenic
AAACAATCAGAAACTGACAA+TGG 0.627847 6:-111301176 MsG0680035731.01.T01:CDS
ACGGATAAGGAAAAGACTTG+AGG 0.629079 6:-111299582 MsG0680035731.01.T01:CDS
TCTTCCGGATTTCTTATCAG+CGG 0.630776 6:+111298223 None:intergenic
CGCTGAGAAGGAAACAGAGG+CGG 0.632734 6:-111301384 MsG0680035731.01.T01:CDS
CCAGCTCCTCAAGAAACACC+AGG 0.634532 6:-111301062 MsG0680035731.01.T01:intron
AGGTGAATCTTGTACCTCCA+CGG 0.639783 6:+111302357 None:intergenic
CACAGAAACGGAAGTATCCG+TGG 0.640815 6:-111302374 MsG0680035731.01.T01:CDS
TGTTCGGTTCAACCTCGGAG+AGG 0.640909 6:-111299450 MsG0680035731.01.T01:CDS
TGGACAAGAAGTTACGGTGA+AGG 0.643574 6:-111302032 MsG0680035731.01.T01:CDS
TTTATTCAAGCTTTCCTCAG+GGG 0.650245 6:+111300828 None:intergenic
TGATGCTAGTTTGTCCCCTG+AGG 0.651987 6:-111300842 MsG0680035731.01.T01:CDS
AGCTGTTGCAGAATTGGACA+AGG 0.653686 6:-111301621 MsG0680035731.01.T01:CDS
TCGTAGTTGCTTAACCAAAG+CGG 0.653913 6:+111298349 None:intergenic
CGCCTCTGTTTCCTTCTCAG+CGG 0.656717 6:+111301385 None:intergenic
ATTAGGGAGAAAATTGTCGA+GGG 0.659307 6:-111297948 MsG0680035731.01.T01:CDS
GACAAGGCACTTGCACAAGT+GGG 0.662224 6:-111301605 MsG0680035731.01.T01:CDS
GTGAAGAATATGACGAGGAG+TGG 0.674205 6:-111301818 MsG0680035731.01.T01:CDS
AGTGGCAGGACTTTCAGGAG+AGG 0.675717 6:+111300658 None:intergenic
CGATGATATAGCCATGCAAG+TGG 0.678787 6:-111299741 MsG0680035731.01.T01:CDS
CCAAACGTTCAAGACCTGCA+AGG 0.680041 6:-111302237 MsG0680035731.01.T01:CDS
CAGAGAAATCCGGCTCTGGG+AGG 0.680505 6:-111301919 MsG0680035731.01.T01:CDS
AGTGGCTGATCAAATTGTTG+CGG 0.682112 6:-111301207 MsG0680035731.01.T01:CDS
TGCCGCTGAGAAGGAAACAG+AGG 0.682448 6:-111301387 MsG0680035731.01.T01:CDS
TGTTACTGAAGATGTTCCCG+AGG 0.683613 6:-111299693 MsG0680035731.01.T01:CDS
TCGAGGGAAGAATCTCAAAG+AGG 0.687349 6:-111297932 MsG0680035731.01.T01:CDS
TCTCTGATTCTGTAACAACA+GGG 0.691768 6:+111301099 None:intergenic
TTGGAGAGAATATTAAAGTG+CGG 0.701032 6:-111297821 MsG0680035731.01.T01:CDS
TTAGCTGAGGAAGATGACGA+TGG 0.704035 6:-111301752 MsG0680035731.01.T01:CDS
TAACAACGTACTCTACTTGG+GGG 0.707276 6:+111299711 None:intergenic
ATCTGTATTGAGGATACACG+AGG 0.709993 6:-111297596 MsG0680035731.01.T01:three_prime_UTR
GTACGGTGAAGAATATGACG+AGG 0.743517 6:-111301823 MsG0680035731.01.T01:CDS
AGAAACGGAAGTATCCGTGG+AGG 0.788331 6:-111302371 MsG0680035731.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GTTATTTAATTATGAAATTT+TGG - Chr6:111300870-111300889 MsG0680035731.01.T01:CDS 10.0%
!! AATTATGGAAATTTCATAAT+GGG + Chr6:111301294-111301313 None:intergenic 15.0%
!! ATTACATATTCAATTAATCA+AGG - Chr6:111301043-111301062 MsG0680035731.01.T01:intron 15.0%
!! GTATTTATATATGGAAATAT+TGG - Chr6:111299122-111299141 MsG0680035731.01.T01:intron 15.0%
!! TAAAAACAAAAATGAAGTTT+GGG + Chr6:111301015-111301034 None:intergenic 15.0%
!! TAATTATGGAAATTTCATAA+TGG + Chr6:111301295-111301314 None:intergenic 15.0%
!! TTAAAAACAAAAATGAAGTT+TGG + Chr6:111301016-111301035 None:intergenic 15.0%
!! TTATCTTATAAGCTTAAATT+AGG - Chr6:111299990-111300009 MsG0680035731.01.T01:CDS 15.0%
!!! ACTTCATTTTTGTTTTTAAA+AGG - Chr6:111301017-111301036 MsG0680035731.01.T01:intron 15.0%
!!! ATATATCATGTCAATTTTAA+TGG + Chr6:111301111-111301130 None:intergenic 15.0%
!!! TTTGATTTTAGCTATAATTT+CGG + Chr6:111299162-111299181 None:intergenic 15.0%
!! ATCTCATTCGTATTTATATA+TGG - Chr6:111299113-111299132 MsG0680035731.01.T01:intron 20.0%
!! CATTAACTTTATGTACTAAT+TGG - Chr6:111301342-111301361 MsG0680035731.01.T01:CDS 20.0%
!! TATTAAATTGTTCAATGTTG+TGG - Chr6:111301740-111301759 MsG0680035731.01.T01:CDS 20.0%
!! TTATCTAAGAATTCAAAGAT+AGG + Chr6:111300056-111300075 None:intergenic 20.0%
!! TTTAAAAACATCAACAATGT+TGG - Chr6:111300989-111301008 MsG0680035731.01.T01:intron 20.0%
!!! AAAAACACAAAATTTGTTGT+AGG - Chr6:111298280-111298299 MsG0680035731.01.T01:CDS 20.0%
!!! ATAATAACCAAATGTTGATT+AGG - Chr6:111302497-111302516 MsG0680035731.01.T01:CDS 20.0%
!!! TAAGCAAAAAACTACATTTT+AGG - Chr6:111299791-111299810 MsG0680035731.01.T01:CDS 20.0%
!!! TAAGGATATTGCTAAATTTT+TGG - Chr6:111298603-111298622 MsG0680035731.01.T01:intron 20.0%
!!! TGGCTTTTAAATTAAGTTAA+AGG - Chr6:111301250-111301269 MsG0680035731.01.T01:CDS 20.0%
! ACATCATTTGTAAAAAGAGT+AGG + Chr6:111301417-111301436 None:intergenic 25.0%
! ACTTTATCATTCTTGATGTA+GGG + Chr6:111300604-111300623 None:intergenic 25.0%
! ATGAAGCAAATAAGATGAAA+TGG + Chr6:111299651-111299670 None:intergenic 25.0%
! ATTAACTTTGAATCCTCAAT+CGG - Chr6:111299429-111299448 MsG0680035731.01.T01:CDS 25.0%
! ATTGAGGATTCAAAGTTAAT+AGG + Chr6:111299429-111299448 None:intergenic 25.0%
! CAAAGTTAATAGGATACTAT+AGG + Chr6:111299419-111299438 None:intergenic 25.0%
! CATTCATTTAATGATGTATG+TGG - Chr6:111299816-111299835 MsG0680035731.01.T01:CDS 25.0%
! CATTTATAATACTTCCTTCT+TGG + Chr6:111298732-111298751 None:intergenic 25.0%
! GACTAATTTGACACAAAAAA+CGG - Chr6:111301219-111301238 MsG0680035731.01.T01:CDS 25.0%
! GAGAAAATATGAAAGTTACA+AGG - Chr6:111300665-111300684 MsG0680035731.01.T01:CDS 25.0%
! GTTATTCTTTCTTGTCAAAT+AGG + Chr6:111297594-111297613 None:intergenic 25.0%
! TGTTTACTTTGGCATAATTA+TGG + Chr6:111301309-111301328 None:intergenic 25.0%
!! AAGAAATAACTAGTTTGACA+TGG + Chr6:111300940-111300959 None:intergenic 25.0%
!! TTTTTGCTTATAATAGTGAC+CGG - Chr6:111299890-111299909 MsG0680035731.01.T01:CDS 25.0%
!! TTTTTGCTTATATTAGTGAC+CGG + Chr6:111299781-111299800 None:intergenic 25.0%
!!! AAATTTTGGTAATTAGTACC+TGG - Chr6:111300884-111300903 MsG0680035731.01.T01:intron 25.0%
!!! AGTATTTGTTGCATTTTCAT+AGG - Chr6:111302422-111302441 MsG0680035731.01.T01:CDS 25.0%
!!! CAAGAAGGAAGTATTATAAA+TGG - Chr6:111298730-111298749 MsG0680035731.01.T01:intron 25.0%
!!! CCATTTTTTTCTCAAAGTTT+GGG + Chr6:111301704-111301723 None:intergenic 25.0%
!!! GTTGATGTTTTTAAACAAAG+AGG + Chr6:111300984-111301003 None:intergenic 25.0%
!!! TCAATTTTGAAACAGAAATC+TGG - Chr6:111302468-111302487 MsG0680035731.01.T01:CDS 25.0%
!!! TCCATTTTTTTCTCAAAGTT+TGG + Chr6:111301705-111301724 None:intergenic 25.0%
!!! TTTTCATAGGAAAAAGTATG+CGG - Chr6:111302435-111302454 MsG0680035731.01.T01:CDS 25.0%
AAAAAAGAATATACACCCTC+CGG - Chr6:111299759-111299778 MsG0680035731.01.T01:CDS 30.0%
AAACAATCAGAAACTGACAA+TGG - Chr6:111298964-111298983 MsG0680035731.01.T01:intron 30.0%
AAATTAAGTTAAAGGAACCC+TGG - Chr6:111301258-111301277 MsG0680035731.01.T01:CDS 30.0%
ACACTGTCATCCTTAATAAA+AGG + Chr6:111302261-111302280 None:intergenic 30.0%
AGGATACTATAGGAAAAGAA+AGG + Chr6:111299409-111299428 None:intergenic 30.0%
AGGTTAGGGTTAAAATATTC+AGG + Chr6:111301493-111301512 None:intergenic 30.0%
ATTAGATCAAGGATTGTTGA+AGG - Chr6:111300535-111300554 MsG0680035731.01.T01:CDS 30.0%
CACTTTATCATTCTTGATGT+AGG + Chr6:111300605-111300624 None:intergenic 30.0%
GAAATCTACAAACTGTACAA+GGG - Chr6:111301456-111301475 MsG0680035731.01.T01:CDS 30.0%
GAATGATAAAGTGACAGTAA+AGG - Chr6:111300612-111300631 MsG0680035731.01.T01:CDS 30.0%
GACATGGAAAAAAAAAGTCA+AGG + Chr6:111300924-111300943 None:intergenic 30.0%
GATACTATAGGAAAAGAAAG+GGG + Chr6:111299407-111299426 None:intergenic 30.0%
GGATACTATAGGAAAAGAAA+GGG + Chr6:111299408-111299427 None:intergenic 30.0%
GTAAAATCTATCCAACCATT+TGG - Chr6:111297989-111298008 MsG0680035731.01.T01:CDS 30.0%
TAAAGTGACAGTAAAGGATA+TGG - Chr6:111300618-111300637 MsG0680035731.01.T01:CDS 30.0%
TACGAAAAGCCAATACAAAA+GGG + Chr6:111298579-111298598 None:intergenic 30.0%
TAGAAAACTATGACCTTGTT+TGG + Chr6:111300024-111300043 None:intergenic 30.0%
TGAAATCTACAAACTGTACA+AGG - Chr6:111301455-111301474 MsG0680035731.01.T01:CDS 30.0%
TGCTAAAATATTCCAGCAAT+GGG - Chr6:111301375-111301394 MsG0680035731.01.T01:CDS 30.0%
TGCTGTAAATTCAATTATCG+AGG - Chr6:111298813-111298832 MsG0680035731.01.T01:intron 30.0%
TTGACACAAAAAACGGATAA+AGG - Chr6:111301226-111301245 MsG0680035731.01.T01:CDS 30.0%
TTGGAGAGAATATTAAAGTG+CGG - Chr6:111302319-111302338 MsG0680035731.01.T01:CDS 30.0%
TTGTCCATTAGAGTTAGATA+AGG + Chr6:111299587-111299606 None:intergenic 30.0%
! AATTTTCTCCCTAATGTTCT+CGG + Chr6:111302187-111302206 None:intergenic 30.0%
! ACTTTTATATCACTTCCTGA+AGG - Chr6:111298346-111298365 MsG0680035731.01.T01:CDS 30.0%
! CCCAAACTTTGAGAAAAAAA+TGG - Chr6:111301701-111301720 MsG0680035731.01.T01:CDS 30.0%
! GCATTTTGTAAACTTACTAC+TGG + Chr6:111301645-111301664 None:intergenic 30.0%
! GTCATCTATTTGAAATGCAA+AGG + Chr6:111299246-111299265 None:intergenic 30.0%
! GTGTTTTTCTTATCTTTCCT+TGG + Chr6:111298268-111298287 None:intergenic 30.0%
! TATGCCAAAGTAAACACTTT+TGG - Chr6:111301313-111301332 MsG0680035731.01.T01:CDS 30.0%
! TGAAAGTTACAAGGTTTGTT+CGG - Chr6:111300674-111300693 MsG0680035731.01.T01:CDS 30.0%
! TTAGGTTGTTTATCCAAACA+AGG - Chr6:111300008-111300027 MsG0680035731.01.T01:CDS 30.0%
! TTATAGTGAAAGACTTGGTT+AGG - Chr6:111302280-111302299 MsG0680035731.01.T01:CDS 30.0%
! TTTAATAGAAACTGACTCAC+CGG - Chr6:111298906-111298925 MsG0680035731.01.T01:intron 30.0%
!! ATCACCAAAAGTGTTTACTT+TGG + Chr6:111301320-111301339 None:intergenic 30.0%
!! GATAATGGGAAAATCTTCTT+TGG - Chr6:111298420-111298439 MsG0680035731.01.T01:intron 30.0%
!! TGCTAAATTTTTGGATCAGA+GGG - Chr6:111298612-111298631 MsG0680035731.01.T01:intron 30.0%
!! TTGCTAAATTTTTGGATCAG+AGG - Chr6:111298611-111298630 MsG0680035731.01.T01:intron 30.0%
!!! ATTGGCTTTTCGTAGAAATA+AGG - Chr6:111298585-111298604 MsG0680035731.01.T01:intron 30.0%
AAATCAACAAACGCACCAAA+TGG + Chr6:111298007-111298026 None:intergenic 35.0%
AAATCATACAGTCACAGCTT+AGG + Chr6:111301549-111301568 None:intergenic 35.0%
AAATCCTCATTCTTTACAGG+AGG + Chr6:111297941-111297960 None:intergenic 35.0%
AACTGAAGGTGATCTTGAAA+AGG - Chr6:111301861-111301880 MsG0680035731.01.T01:CDS 35.0%
AACTGCATCATTATCTTCCT+CGG + Chr6:111299013-111299032 None:intergenic 35.0%
AAGAATAACTCGAGAAGGTT+AGG + Chr6:111301508-111301527 None:intergenic 35.0%
AAGCAGACAATTGCAACTAT+TGG - Chr6:111300643-111300662 MsG0680035731.01.T01:CDS 35.0%
AAGTGAGAAATTCAAGGAGT+TGG - Chr6:111302032-111302051 MsG0680035731.01.T01:CDS 35.0%
ACCAAATCCTCATTCTTTAC+AGG + Chr6:111297944-111297963 None:intergenic 35.0%
ACTGATCTGTATCTGTATTG+AGG - Chr6:111302534-111302553 MsG0680035731.01.T01:CDS 35.0%
AGAATAACTCGAGAAGGTTA+GGG + Chr6:111301507-111301526 None:intergenic 35.0%
AGATTCACCAGAAACTTCAT+TGG + Chr6:111297813-111297832 None:intergenic 35.0%
AGCACCTTATCTAACTCTAA+TGG - Chr6:111299580-111299599 MsG0680035731.01.T01:CDS 35.0%
AGTAACAACGTACTCTACTT+GGG + Chr6:111300434-111300453 None:intergenic 35.0%
ATAGATACAAACTGAACCTG+TGG + Chr6:111302090-111302109 None:intergenic 35.0%
ATAGCAAGAATAACTCGAGA+AGG + Chr6:111301513-111301532 None:intergenic 35.0%
ATATAGTTGCTGCAATCCAA+AGG + Chr6:111300111-111300130 None:intergenic 35.0%
ATCAGAAACTGACAATGGAA+AGG - Chr6:111298969-111298988 MsG0680035731.01.T01:intron 35.0%
ATCATCAACTACAGAAACTG+TGG - Chr6:111298657-111298676 MsG0680035731.01.T01:intron 35.0%
ATCTCTGATTCTGTAACAAC+AGG + Chr6:111299045-111299064 None:intergenic 35.0%
ATTAGGGAGAAAATTGTCGA+GGG - Chr6:111302192-111302211 MsG0680035731.01.T01:CDS 35.0%
CAAGAGCTCCTTAGAAAAAA+AGG - Chr6:111300229-111300248 MsG0680035731.01.T01:intron 35.0%
CACAAAAAACGGATAAAGGA+TGG - Chr6:111301230-111301249 MsG0680035731.01.T01:CDS 35.0%
CAGTGTTATAGTGAAAGACT+TGG - Chr6:111302275-111302294 MsG0680035731.01.T01:CDS 35.0%
CTACGAAAAGCCAATACAAA+AGG + Chr6:111298580-111298599 None:intergenic 35.0%
CTTGTTCCAACTTCATTTGA+AGG + Chr6:111297836-111297855 None:intergenic 35.0%
CTTTATTCAAGCTTTCCTCA+GGG + Chr6:111299316-111299335 None:intergenic 35.0%
GAATCTCCTTCAAATGAAGT+TGG - Chr6:111297827-111297846 MsG0680035731.01.T01:CDS 35.0%
GAATTCAAAGATAGGTGAAC+AGG + Chr6:111300048-111300067 None:intergenic 35.0%
GAGGACTAACTAACTTAACA+CGG + Chr6:111300965-111300984 None:intergenic 35.0%
GTGCTAAAATATTCCAGCAA+TGG - Chr6:111301374-111301393 MsG0680035731.01.T01:CDS 35.0%
TATAGTTGCTGCAATCCAAA+GGG + Chr6:111300110-111300129 None:intergenic 35.0%
TCATTGAACCACACTTACTT+TGG + Chr6:111300832-111300851 None:intergenic 35.0%
TCCTGTAAAGAATGAGGATT+TGG - Chr6:111297940-111297959 MsG0680035731.01.T01:CDS 35.0%
TCTCTGATTCTGTAACAACA+GGG + Chr6:111299044-111299063 None:intergenic 35.0%
TGAGATAGAAAACAAGAACC+TGG + Chr6:111299099-111299118 None:intergenic 35.0%
TGTAAACTTACTACTGGTGT+CGG + Chr6:111301639-111301658 None:intergenic 35.0%
TTCCTTCGTCACAATAGTTT+CGG + Chr6:111302124-111302143 None:intergenic 35.0%
TTCTTTCTTCACGAATTCCT+CGG + Chr6:111300467-111300486 None:intergenic 35.0%
TTTATTCAAGCTTTCCTCAG+GGG + Chr6:111299315-111299334 None:intergenic 35.0%
! AATGCTCTTTCTGAAAGTGA+AGG - Chr6:111300190-111300209 MsG0680035731.01.T01:intron 35.0%
! ATTTTCTCCCTAATGTTCTC+GGG + Chr6:111302186-111302205 None:intergenic 35.0%
! GATGGATTTGGGAAGATAAT+GGG - Chr6:111298406-111298425 MsG0680035731.01.T01:intron 35.0%
! GGAAAATCTTCTTTGGAGAT+TGG - Chr6:111298427-111298446 MsG0680035731.01.T01:intron 35.0%
! TAACCAGACTCAACTTTTCA+AGG - Chr6:111297618-111297637 MsG0680035731.01.T01:three_prime_UTR 35.0%
! TCTAACTCTAATGGACAAAC+TGG - Chr6:111299589-111299608 MsG0680035731.01.T01:CDS 35.0%
! TGGAAGTTCGAGAATTTTTC+CGG + Chr6:111297739-111297758 None:intergenic 35.0%
!! ATCCTTGATCTAATTTGCTC+CGG + Chr6:111300529-111300548 None:intergenic 35.0%
!! CACAAAATTTGTTGTAGGTC+AGG - Chr6:111298285-111298304 MsG0680035731.01.T01:CDS 35.0%
!! GTTGAGTGATAGCTTTGTAA+AGG - Chr6:111298063-111298082 MsG0680035731.01.T01:CDS 35.0%
!! TCAAGGAGTTCTTTAAGACA+CGG - Chr6:111297635-111297654 MsG0680035731.01.T01:three_prime_UTR 35.0%
!! TCTAGAGCAGCCTTTTATTA+AGG - Chr6:111302248-111302267 MsG0680035731.01.T01:CDS 35.0%
!! TGAAAGCACTGACACAAATA+CGG - Chr6:111301584-111301603 MsG0680035731.01.T01:CDS 35.0%
!! TTTGGTGCGTTTGTTGATTT+CGG - Chr6:111298007-111298026 MsG0680035731.01.T01:CDS 35.0%
!!! TCGCTAAGCCTTTTTTTCTA+AGG + Chr6:111300240-111300259 None:intergenic 35.0%
AACCGGAGCAAATTAGATCA+AGG - Chr6:111300524-111300543 MsG0680035731.01.T01:CDS 40.0%
AAGCAACTACGAGAAGAAAC+CGG - Chr6:111301802-111301821 MsG0680035731.01.T01:CDS 40.0%
AATGCCTCCTGTAAAGAATG+AGG - Chr6:111297934-111297953 MsG0680035731.01.T01:CDS 40.0%
ACAAGCGAATATGCTCTTAC+CGG - Chr6:111297717-111297736 MsG0680035731.01.T01:three_prime_UTR 40.0%
ACATTGACCATGAAGAAGGA+AGG - Chr6:111298496-111298515 MsG0680035731.01.T01:intron 40.0%
ACGGATAAGGAAAAGACTTG+AGG - Chr6:111300558-111300577 MsG0680035731.01.T01:CDS 40.0%
ACTCCTTGAAAAGTTGAGTC+TGG + Chr6:111297624-111297643 None:intergenic 40.0%
AGAAACTGTGGAAGATTCAC+TGG - Chr6:111298669-111298688 MsG0680035731.01.T01:intron 40.0%
AGAAGATCTTGCGTCAAAAC+CGG - Chr6:111300507-111300526 MsG0680035731.01.T01:intron 40.0%
AGACTGAACCAAAGTAAGTG+TGG - Chr6:111300821-111300840 MsG0680035731.01.T01:intron 40.0%
AGGATTTCTACCATTAGCTG+AGG - Chr6:111298375-111298394 MsG0680035731.01.T01:CDS 40.0%
AGGCAAAGTATAGCTGCTAT+TGG - Chr6:111302300-111302319 MsG0680035731.01.T01:CDS 40.0%
AGTGGCTGATCAAATTGTTG+CGG - Chr6:111298933-111298952 MsG0680035731.01.T01:intron 40.0%
ATCACCTTCAGTTTCAGCAA+GGG + Chr6:111301854-111301873 None:intergenic 40.0%
ATCTGTATTGAGGATACACG+AGG - Chr6:111302544-111302563 MsG0680035731.01.T01:CDS 40.0%
ATGCGTGAAAACACTGATAC+TGG - Chr6:111298172-111298191 MsG0680035731.01.T01:CDS 40.0%
ATGCTCTGTCGGAAATTCTT+CGG - Chr6:111297553-111297572 MsG0680035731.01.T01:three_prime_UTR 40.0%
ATTGTTCAATGTTGTGGTGC+AGG - Chr6:111301746-111301765 MsG0680035731.01.T01:CDS 40.0%
ATTTCTTATCAGCGGATGAG+AGG + Chr6:111301912-111301931 None:intergenic 40.0%
ATTTGATCAGCCACTTCAAC+CGG + Chr6:111298928-111298947 None:intergenic 40.0%
CAAGCATACCTCAGGAAAAA+GGG - Chr6:111301886-111301905 MsG0680035731.01.T01:CDS 40.0%
CAGTAACAACGTACTCTACT+TGG + Chr6:111300435-111300454 None:intergenic 40.0%
CATTAGGGAGAAAATTGTCG+AGG - Chr6:111302191-111302210 MsG0680035731.01.T01:CDS 40.0%
CCCATAATATCATGCTCTGT+CGG - Chr6:111297542-111297561 MsG0680035731.01.T01:three_prime_UTR 40.0%
CCGACAGAGCATGATATTAT+GGG + Chr6:111297545-111297564 None:intergenic 40.0%
CCTGAGGAAAGCTTGAATAA+AGG - Chr6:111299314-111299333 MsG0680035731.01.T01:intron 40.0%
CCTTTATTCAAGCTTTCCTC+AGG + Chr6:111299317-111299336 None:intergenic 40.0%
GAAAACCTTGTAAGCTATGC+TGG + Chr6:111302396-111302415 None:intergenic 40.0%
GATCAAGGATTGTTGAAGGA+CGG - Chr6:111300539-111300558 MsG0680035731.01.T01:CDS 40.0%
GGAAATTCTTCGGTTATTCC+TGG - Chr6:111297563-111297582 MsG0680035731.01.T01:three_prime_UTR 40.0%
GGAAGAATCTCAAAGAGGTT+AGG - Chr6:111302213-111302232 MsG0680035731.01.T01:CDS 40.0%
GTAACAACGTACTCTACTTG+GGG + Chr6:111300433-111300452 None:intergenic 40.0%
GTAAGAACCTATCCTTCCTT+CGG + Chr6:111300293-111300312 None:intergenic 40.0%
GTCTCTTGGACAAGAAGTTA+CGG - Chr6:111298102-111298121 MsG0680035731.01.T01:CDS 40.0%
TAACAACGTACTCTACTTGG+GGG + Chr6:111300432-111300451 None:intergenic 40.0%
TAATGGGAAAAACGACACCA+GGG + Chr6:111301278-111301297 None:intergenic 40.0%
TAGTACCTGGAGTTTCAAAC+AGG - Chr6:111300897-111300916 MsG0680035731.01.T01:intron 40.0%
TATATCACTTCCTGAAGGAG+AGG - Chr6:111298351-111298370 MsG0680035731.01.T01:CDS 40.0%
TCAGATGAAGGATCGAGTAA+AGG - Chr6:111299622-111299641 MsG0680035731.01.T01:CDS 40.0%
TCATCCGCTGATAAGAAATC+CGG - Chr6:111301913-111301932 MsG0680035731.01.T01:CDS 40.0%
TCCGACAGAGCATGATATTA+TGG + Chr6:111297546-111297565 None:intergenic 40.0%
TCCTTCGTCACAATAGTTTC+GGG + Chr6:111302123-111302142 None:intergenic 40.0%
TCGAACAATGCAGAGAAATC+CGG - Chr6:111298211-111298230 MsG0680035731.01.T01:CDS 40.0%
TCGTAGTTGCTTAACCAAAG+CGG + Chr6:111301794-111301813 None:intergenic 40.0%
TCTTCCGGATTTCTTATCAG+CGG + Chr6:111301920-111301939 None:intergenic 40.0%
TCTTTCACTGGAGTAGTTAC+CGG + Chr6:111300775-111300794 None:intergenic 40.0%
TCTTTCTTCACGAATTCCTC+GGG + Chr6:111300466-111300485 None:intergenic 40.0%
TGAAGCAGTTGCAATTGCAT+CGG - Chr6:111299549-111299568 MsG0680035731.01.T01:CDS 40.0%
TGATAAGAAATCCGGAAGAC+TGG - Chr6:111301921-111301940 MsG0680035731.01.T01:CDS 40.0%
TGCACAAACTACAGCAAAAC+CGG - Chr6:111300753-111300772 MsG0680035731.01.T01:intron 40.0%
TGCTTATAATAGTGACCGGA+GGG - Chr6:111299894-111299913 MsG0680035731.01.T01:CDS 40.0%
TGCTTATATTAGTGACCGGA+GGG + Chr6:111299777-111299796 None:intergenic 40.0%
TGGCAGAAGTGAGAAATTCA+AGG - Chr6:111302026-111302045 MsG0680035731.01.T01:CDS 40.0%
TTCCATATCAGCCACAGAAA+CGG - Chr6:111297754-111297773 MsG0680035731.01.T01:exon 40.0%
TTCGAAACCCGAGAACATTA+GGG - Chr6:111302176-111302195 MsG0680035731.01.T01:CDS 40.0%
TTGCTTATAATAGTGACCGG+AGG - Chr6:111299893-111299912 MsG0680035731.01.T01:CDS 40.0%
TTGCTTATATTAGTGACCGG+AGG + Chr6:111299778-111299797 None:intergenic 40.0%
TTTCCTTCATTTGTCGCCAA+TGG - Chr6:111297680-111297699 MsG0680035731.01.T01:three_prime_UTR 40.0%
! AACCAAATGTTGATTAGGCG+CGG - Chr6:111302502-111302521 MsG0680035731.01.T01:CDS 40.0%
! AACTGTGAAACCGACTTTGT+TGG - Chr6:111302006-111302025 MsG0680035731.01.T01:CDS 40.0%
! AAGAATGAGGATTTGGTTCC+CGG - Chr6:111297947-111297966 MsG0680035731.01.T01:CDS 40.0%
! AGGAAGATGACGATGGATTT+GGG - Chr6:111298395-111298414 MsG0680035731.01.T01:intron 40.0%
! ATAAATGGAAGTACACCCTC+CGG + Chr6:111299912-111299931 None:intergenic 40.0%
! ATAATGGGAAAAACGACACC+AGG + Chr6:111301279-111301298 None:intergenic 40.0%
! CGATGGATTTGGGAAGATAA+TGG - Chr6:111298405-111298424 MsG0680035731.01.T01:intron 40.0%
! CGCAACAAACCCTTTTGTAT+TGG - Chr6:111298567-111298586 MsG0680035731.01.T01:intron 40.0%
! TCAATTACATCTGCCGATTG+AGG + Chr6:111299445-111299464 None:intergenic 40.0%
! TCTTCAACTTGTGCTGATAC+AGG + Chr6:111299529-111299548 None:intergenic 40.0%
! TTACTTTGGTTCAGTCTCCT+TGG + Chr6:111300818-111300837 None:intergenic 40.0%
!! CAAGGAGTTCTTTAAGACAC+GGG - Chr6:111297636-111297655 MsG0680035731.01.T01:three_prime_UTR 40.0%
!! GTTCTGAGGAAAAACTCCAT+TGG + Chr6:111297699-111297718 None:intergenic 40.0%
!! TGTTGATTTCGGAGCTTTCA+CGG - Chr6:111298018-111298037 MsG0680035731.01.T01:CDS 40.0%
!! TTAAAGTGCGGCGTTTTGTT+CGG - Chr6:111302331-111302350 MsG0680035731.01.T01:CDS 40.0%
AAAGCCCTTGCTGAAACTGA+AGG - Chr6:111301847-111301866 MsG0680035731.01.T01:CDS 45.0%
AACAGCTCCTTCCTTCTTCA+TGG + Chr6:111298506-111298525 None:intergenic 45.0%
ACTCCATTGGCGACAAATGA+AGG + Chr6:111297686-111297705 None:intergenic 45.0%
AGAAATCCTTCCTCTCCTTC+AGG + Chr6:111298364-111298383 None:intergenic 45.0%
AGAATTTGTAGCTGCAACCG+AGG - Chr6:111298993-111299012 MsG0680035731.01.T01:intron 45.0%
AGCACTTGTGAAGCAACTTC+GGG - Chr6:111300135-111300154 MsG0680035731.01.T01:intron 45.0%
AGCGACATTGACCATGAAGA+AGG - Chr6:111298492-111298511 MsG0680035731.01.T01:intron 45.0%
AGCTGTTGCAGAATTGGACA+AGG - Chr6:111298519-111298538 MsG0680035731.01.T01:intron 45.0%
AGGTGAATCTTGTACCTCCA+CGG + Chr6:111297786-111297805 None:intergenic 45.0%
CAACAAACGCACCAAATGGT+TGG + Chr6:111298003-111298022 None:intergenic 45.0%
CAAGAACCTGGTGTTTCTTG+AGG + Chr6:111299087-111299106 None:intergenic 45.0%
CAGCACTTGTGAAGCAACTT+CGG - Chr6:111300134-111300153 MsG0680035731.01.T01:intron 45.0%
CCAGAAACTTCATTGGCAAC+AGG + Chr6:111297806-111297825 None:intergenic 45.0%
CCTGTTGCCAATGAAGTTTC+TGG - Chr6:111297803-111297822 MsG0680035731.01.T01:CDS 45.0%
CGATGATATAGCCATGCAAG+TGG - Chr6:111300399-111300418 MsG0680035731.01.T01:intron 45.0%
CTCACTTCTGCCAACAAAGT+CGG + Chr6:111302019-111302038 None:intergenic 45.0%
CTGTACCAGCATAGCTTACA+AGG - Chr6:111302388-111302407 MsG0680035731.01.T01:CDS 45.0%
CTTCGAAACCCGAGAACATT+AGG - Chr6:111302175-111302194 MsG0680035731.01.T01:CDS 45.0%
CTTGTCAAATAGGCAACTCC+AGG + Chr6:111297584-111297603 None:intergenic 45.0%
GAGCATATTCGCTTGTTCTG+AGG + Chr6:111297713-111297732 None:intergenic 45.0%
GATAATGATGCAGTTGAGCC+TGG - Chr6:111299018-111299037 MsG0680035731.01.T01:intron 45.0%
GATCACCTTCAGTTTCAGCA+AGG + Chr6:111301855-111301874 None:intergenic 45.0%
GCAAGCATACCTCAGGAAAA+AGG - Chr6:111301885-111301904 MsG0680035731.01.T01:CDS 45.0%
GGATTGTTGAAGGACGGATA+AGG - Chr6:111300545-111300564 MsG0680035731.01.T01:CDS 45.0%
GGCATTACTGCTTCAGATGA+AGG - Chr6:111299610-111299629 MsG0680035731.01.T01:CDS 45.0%
GGGTTTGGAAAAGAAAAGCG+AGG - Chr6:111300711-111300730 MsG0680035731.01.T01:intron 45.0%
GGTAACTACTCCAGTGAAAG+AGG - Chr6:111300774-111300793 MsG0680035731.01.T01:intron 45.0%
GTACGGTGAAGAATATGACG+AGG - Chr6:111298317-111298336 MsG0680035731.01.T01:CDS 45.0%
GTGAAGAATATGACGAGGAG+TGG - Chr6:111298322-111298341 MsG0680035731.01.T01:CDS 45.0%
GTTCTTACATCCATGACAGC+AGG - Chr6:111300305-111300324 MsG0680035731.01.T01:intron 45.0%
TAAGACACGGGTCATCAACT+CGG - Chr6:111297648-111297667 MsG0680035731.01.T01:three_prime_UTR 45.0%
TACATCCATGACAGCAGGAT+CGG - Chr6:111300310-111300329 MsG0680035731.01.T01:intron 45.0%
TACATTCACGATGCACGCAT+TGG - Chr6:111301967-111301986 MsG0680035731.01.T01:CDS 45.0%
TCACCGATCAGTACCACAAT+TGG + Chr6:111301177-111301196 None:intergenic 45.0%
TCCCGAAACTATTGTGACGA+AGG - Chr6:111302119-111302138 MsG0680035731.01.T01:CDS 45.0%
TCGAGGGAAGAATCTCAAAG+AGG - Chr6:111302208-111302227 MsG0680035731.01.T01:CDS 45.0%
TCGTCATCTTCCTCAGCTAA+TGG + Chr6:111298388-111298407 None:intergenic 45.0%
TCTAAGGAGCTCTTGTGCTT+TGG + Chr6:111300224-111300243 None:intergenic 45.0%
TCTTTCCTTGGACCCGATTT+CGG + Chr6:111298256-111298275 None:intergenic 45.0%
TGAGAAATGCAACCCATTGC+TGG + Chr6:111301390-111301409 None:intergenic 45.0%
TGGACAAGAAGTTACGGTGA+AGG - Chr6:111298108-111298127 MsG0680035731.01.T01:CDS 45.0%
TGTCAACGAAAGGCCAATTG+TGG - Chr6:111301161-111301180 MsG0680035731.01.T01:CDS 45.0%
TGTTACTGAAGATGTTCCCG+AGG - Chr6:111300447-111300466 MsG0680035731.01.T01:intron 45.0%
TTAGCTGAGGAAGATGACGA+TGG - Chr6:111298388-111298407 MsG0680035731.01.T01:intron 45.0%
TTCCGTTTCTGTGGCTGATA+TGG + Chr6:111297759-111297778 None:intergenic 45.0%
TTGTTCTTGCACCTCTTCAG+TGG + Chr6:111299503-111299522 None:intergenic 45.0%
! AAGGACCTGTTTGAAACTCC+AGG + Chr6:111300905-111300924 None:intergenic 45.0%
! AGAATGAGGATTTGGTTCCC+GGG - Chr6:111297948-111297967 MsG0680035731.01.T01:CDS 45.0%
! AGGTTTGTTCGGTTCAACCT+CGG - Chr6:111300685-111300704 MsG0680035731.01.T01:CDS 45.0%
! CAACGTTGAAACTGACTCAC+CGG - Chr6:111298864-111298883 MsG0680035731.01.T01:intron 45.0%
! CGAGTTTTGCGTATCACAAG+AGG - Chr6:111298466-111298485 MsG0680035731.01.T01:intron 45.0%
! CTGACCTTGTTGTCAACGAA+AGG - Chr6:111301151-111301170 MsG0680035731.01.T01:CDS 45.0%
! GAGACAGATTTTGTCTCTCG+AGG - Chr6:111300355-111300374 MsG0680035731.01.T01:intron 45.0%
! GAGGAAGATGACGATGGATT+TGG - Chr6:111298394-111298413 MsG0680035731.01.T01:intron 45.0%
! GTCTCAAGTGTTGTGTCTCT+TGG - Chr6:111298088-111298107 MsG0680035731.01.T01:CDS 45.0%
! TTCAGGAGAGGGAAGTTGAT+TGG + Chr6:111299473-111299492 None:intergenic 45.0%
! TTGGCCTTTCGTTGACAACA+AGG + Chr6:111301158-111301177 None:intergenic 45.0%
!! AGGCCAATTGTGGTACTGAT+CGG - Chr6:111301171-111301190 MsG0680035731.01.T01:CDS 45.0%
!! CGTTTTGTTCGGTTCACTCT+TGG - Chr6:111302342-111302361 MsG0680035731.01.T01:CDS 45.0%
!! TATAAATGGTGCCGCTGAGA+AGG - Chr6:111298744-111298763 MsG0680035731.01.T01:intron 45.0%
!! AAGATAAAATATATTATAAA+TGG + Chr6:111299927-111299946 None:intergenic 5.0%
AAACACCGATCCTGCTGTCA+TGG + Chr6:111300318-111300337 None:intergenic 50.0%
AAGCAACTTCGGGACGAAAC+AGG - Chr6:111300145-111300164 MsG0680035731.01.T01:intron 50.0%
AATGCAGAGAAATCCGGCTC+TGG - Chr6:111298217-111298236 MsG0680035731.01.T01:CDS 50.0%
AGAGGCGGTTGCTGAAAGTT+TGG - Chr6:111298771-111298790 MsG0680035731.01.T01:intron 50.0%
AGGTGGGATTCTCCGAAATC+GGG - Chr6:111298241-111298260 MsG0680035731.01.T01:CDS 50.0%
ATGCAGAGAAATCCGGCTCT+GGG - Chr6:111298218-111298237 MsG0680035731.01.T01:CDS 50.0%
ATTCTCCGAAATCGGGTCCA+AGG - Chr6:111298248-111298267 MsG0680035731.01.T01:CDS 50.0%
CACGGATACTTCCGTTTCTG+TGG + Chr6:111297768-111297787 None:intergenic 50.0%
CCAAACGTTCAAGACCTGCA+AGG - Chr6:111297903-111297922 MsG0680035731.01.T01:CDS 50.0%
CCTAAGTCTGATGCCAACAC+TGG - Chr6:111297869-111297888 MsG0680035731.01.T01:CDS 50.0%
CCTTGCAGGTCTTGAACGTT+TGG + Chr6:111297906-111297925 None:intergenic 50.0%
CGAAACAGGAGCTGGAATGA+TGG - Chr6:111300159-111300178 MsG0680035731.01.T01:intron 50.0%
CGAAGTTGCTTCACAAGTGC+TGG + Chr6:111300136-111300155 None:intergenic 50.0%
CGATTCCTCGACAACTGTTG+TGG - Chr6:111298693-111298712 MsG0680035731.01.T01:intron 50.0%
CTGGCAGCTGAAGGAAGAAT+CGG - Chr6:111301940-111301959 MsG0680035731.01.T01:CDS 50.0%
CTTTCATCAGCCACGTCAAC+CGG + Chr6:111298886-111298905 None:intergenic 50.0%
GACGCTGAAAGCAACCAAGA+AGG - Chr6:111298715-111298734 MsG0680035731.01.T01:intron 50.0%
GAGGTGGGATTCTCCGAAAT+CGG - Chr6:111298240-111298259 MsG0680035731.01.T01:CDS 50.0%
GATTCTGTAACAACAGGGCC+AGG + Chr6:111299039-111299058 None:intergenic 50.0%
GATTTCGGAGCTTTCACGGA+CGG - Chr6:111298022-111298041 MsG0680035731.01.T01:CDS 50.0%
GGAAGGAGCTGTTGCAGAAT+TGG - Chr6:111298513-111298532 MsG0680035731.01.T01:intron 50.0%
GGCTTTCGTAGAACCAGTGT+TGG + Chr6:111297885-111297904 None:intergenic 50.0%
GTCCGCGCCTAATCAACATT+TGG + Chr6:111302507-111302526 None:intergenic 50.0%
GTGCAGGAAATCAGCAGTAG+TGG - Chr6:111301762-111301781 MsG0680035731.01.T01:CDS 50.0%
GTTGTAGGTCAGGAGTTGCA+GGG - Chr6:111298295-111298314 MsG0680035731.01.T01:CDS 50.0%
TACGAGAAGAAACCGGTGCA+GGG - Chr6:111301809-111301828 MsG0680035731.01.T01:CDS 50.0%
TCACTTCCTGAAGGAGAGGA+AGG - Chr6:111298355-111298374 MsG0680035731.01.T01:CDS 50.0%
TCTTCAGTGGCAGGACTTTC+AGG + Chr6:111299490-111299509 None:intergenic 50.0%
TGAAAGTCCTGCCACTGAAG+AGG - Chr6:111299489-111299508 MsG0680035731.01.T01:CDS 50.0%
TGTTCTCGGGTTTCGAAGCA+AGG + Chr6:111302173-111302192 None:intergenic 50.0%
TGTTGTAGGTCAGGAGTTGC+AGG - Chr6:111298294-111298313 MsG0680035731.01.T01:CDS 50.0%
TTCAGTCTCCTTGGCTTCTG+CGG + Chr6:111300809-111300828 None:intergenic 50.0%
! AAAAGGCGCAAGCATACCTC+AGG - Chr6:111301878-111301897 MsG0680035731.01.T01:CDS 50.0%
! AACTGACTCACCGGTTGAAG+TGG - Chr6:111298915-111298934 MsG0680035731.01.T01:intron 50.0%
! ATGAGAGGCCCTTTTTCCTG+AGG + Chr6:111301897-111301916 None:intergenic 50.0%
! GAATGAGGATTTGGTTCCCG+GGG - Chr6:111297949-111297968 MsG0680035731.01.T01:CDS 50.0%
! GACAAGGCACTTGCACAAGT+GGG - Chr6:111298535-111298554 MsG0680035731.01.T01:intron 50.0%
! TCTTTTCCAAACCCTCTCCG+AGG + Chr6:111300705-111300724 None:intergenic 50.0%
! TGATGCTAGTTTGTCCCCTG+AGG - Chr6:111299298-111299317 MsG0680035731.01.T01:intron 50.0%
!! AGAAACGGAAGTATCCGTGG+AGG - Chr6:111297769-111297788 MsG0680035731.01.T01:CDS 50.0%
!! CACAGAAACGGAAGTATCCG+TGG - Chr6:111297766-111297785 MsG0680035731.01.T01:CDS 50.0%
!! CCAGTGTTGGCATCAGACTT+AGG + Chr6:111297872-111297891 None:intergenic 50.0%
!! GGCATTTCGCTTTTCCTTGC+AGG + Chr6:111297920-111297939 None:intergenic 50.0%
!! TGACAGCAGGATCGGTGTTT+TGG - Chr6:111300318-111300337 MsG0680035731.01.T01:intron 50.0%
ACAGTCCATCATCCCTGCAC+CGG + Chr6:111301824-111301843 None:intergenic 55.0%
AGAAACCGGTGCAGGGATGA+TGG - Chr6:111301816-111301835 MsG0680035731.01.T01:CDS 55.0%
AGCGTCCACAACAGTTGTCG+AGG + Chr6:111298701-111298720 None:intergenic 55.0%
AGGTCAGGAGTTGCAGGGTA+CGG - Chr6:111298300-111298319 MsG0680035731.01.T01:CDS 55.0%
AGTAGTGGTCTCAGCCGCTT+TGG - Chr6:111301777-111301796 MsG0680035731.01.T01:CDS 55.0%
AGTGGCAGGACTTTCAGGAG+AGG + Chr6:111299485-111299504 None:intergenic 55.0%
ATGTCTGTTCCGCTGCCCTT+TGG - Chr6:111300092-111300111 MsG0680035731.01.T01:intron 55.0%
CCAGCTCCTCAAGAAACACC+AGG - Chr6:111299078-111299097 MsG0680035731.01.T01:intron 55.0%
CCTGGTGTTTCTTGAGGAGC+TGG + Chr6:111299081-111299100 None:intergenic 55.0%
CGCCTCTGTTTCCTTCTCAG+CGG + Chr6:111298758-111298777 None:intergenic 55.0%
CGCTGAGAAGGAAACAGAGG+CGG - Chr6:111298756-111298775 MsG0680035731.01.T01:intron 55.0%
CTACGAGAAGAAACCGGTGC+AGG - Chr6:111301808-111301827 MsG0680035731.01.T01:CDS 55.0%
GCAACTGCCGAAGGAAGGAT+AGG - Chr6:111300283-111300302 MsG0680035731.01.T01:intron 55.0%
GTGGCAGGACTTTCAGGAGA+GGG + Chr6:111299484-111299503 None:intergenic 55.0%
GTTCAACCTCGGAGAGGGTT+TGG - Chr6:111300696-111300715 MsG0680035731.01.T01:intron 55.0%
GTTCGGTTCAACCTCGGAGA+GGG - Chr6:111300691-111300710 MsG0680035731.01.T01:intron 55.0%
TCCTTCAGCTGCCAGTCTTC+CGG + Chr6:111301935-111301954 None:intergenic 55.0%
TCTTGCACCTCTTCAGTGGC+AGG + Chr6:111299499-111299518 None:intergenic 55.0%
TGCCGCTGAGAAGGAAACAG+AGG - Chr6:111298753-111298772 MsG0680035731.01.T01:intron 55.0%
TGCTGCAATCCAAAGGGCAG+CGG + Chr6:111300104-111300123 None:intergenic 55.0%
TGTTCGGTTCAACCTCGGAG+AGG - Chr6:111300690-111300709 MsG0680035731.01.T01:intron 55.0%
TTTCCCCGTAAAAGCTGCCC+CGG + Chr6:111297969-111297988 None:intergenic 55.0%
! AACTGACTCACCGGTTGACG+TGG - Chr6:111298873-111298892 MsG0680035731.01.T01:intron 55.0%
! GCAAGTTGCTGCTTGTCCAC+AGG - Chr6:111302071-111302090 MsG0680035731.01.T01:CDS 55.0%
! GGACAAGGCACTTGCACAAG+TGG - Chr6:111298534-111298553 MsG0680035731.01.T01:intron 55.0%
AGAATCCCACCTCCCAGAGC+CGG + Chr6:111298233-111298252 None:intergenic 60.0%
CCAGAGCAACTGCCGAAGGA+AGG - Chr6:111300278-111300297 MsG0680035731.01.T01:intron 60.0%
CCTTCCTTCGGCAGTTGCTC+TGG + Chr6:111300281-111300300 None:intergenic 60.0%
CTTCGGGACGAAACAGGAGC+TGG - Chr6:111300151-111300170 MsG0680035731.01.T01:intron 60.0%
GCAGCAGGCTCCTCTTTCAC+TGG + Chr6:111300787-111300806 None:intergenic 60.0%
TCCGGAAGACTGGCAGCTGA+AGG - Chr6:111301931-111301950 MsG0680035731.01.T01:CDS 60.0%
TTCCCCGTAAAAGCTGCCCC+GGG + Chr6:111297968-111297987 None:intergenic 60.0%
! GGTTCCCGGGGCAGCTTTTA+CGG - Chr6:111297961-111297980 MsG0680035731.01.T01:CDS 60.0%
! GTTCCCGGGGCAGCTTTTAC+GGG - Chr6:111297962-111297981 MsG0680035731.01.T01:CDS 60.0%
! TTCCCGGGGCAGCTTTTACG+GGG - Chr6:111297963-111297982 MsG0680035731.01.T01:CDS 60.0%
!! AGAAATCCGGCTCTGGGAGG+TGG - Chr6:111298224-111298243 MsG0680035731.01.T01:CDS 60.0%
!! CAGAGAAATCCGGCTCTGGG+AGG - Chr6:111298221-111298240 MsG0680035731.01.T01:CDS 60.0%
!! GAAATCCGGCTCTGGGAGGT+GGG - Chr6:111298225-111298244 MsG0680035731.01.T01:CDS 60.0%
GCAGCCAGAGCAACTGCCGA+AGG - Chr6:111300274-111300293 MsG0680035731.01.T01:intron 65.0%
TCCTTGGCTTCTGCGGCAGC+AGG + Chr6:111300802-111300821 None:intergenic 65.0%
GCCTGCTGCCGCAGAAGCCA+AGG - Chr6:111300798-111300817 MsG0680035731.01.T01:intron 70.0%
GGGGCACGCAGCCACTTGCA+TGG + Chr6:111300413-111300432 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr6 gene 111297536 111302626 111297536 ID=MsG0680035731.01;Name=MsG0680035731.01
Chr6 mRNA 111297536 111302626 111297536 ID=MsG0680035731.01.T01;Parent=MsG0680035731.01;Name=MsG0680035731.01.T01;_AED=0.48;_eAED=0.48;_QI=0|1|0.8|1|1|1|5|225|1057
Chr6 exon 111297536 111298394 111297536 ID=MsG0680035731.01.T01:exon:15004;Parent=MsG0680035731.01.T01
Chr6 exon 111299329 111300040 111299329 ID=MsG0680035731.01.T01:exon:15003;Parent=MsG0680035731.01.T01
Chr6 exon 111300519 111300707 111300519 ID=MsG0680035731.01.T01:exon:15002;Parent=MsG0680035731.01.T01
Chr6 exon 111300827 111300901 111300827 ID=MsG0680035731.01.T01:exon:15001;Parent=MsG0680035731.01.T01
Chr6 exon 111301063 111302626 111301063 ID=MsG0680035731.01.T01:exon:15000;Parent=MsG0680035731.01.T01
Chr6 CDS 111301063 111302626 111301063 ID=MsG0680035731.01.T01:cds;Parent=MsG0680035731.01.T01
Chr6 CDS 111300827 111300901 111300827 ID=MsG0680035731.01.T01:cds;Parent=MsG0680035731.01.T01
Chr6 CDS 111300519 111300707 111300519 ID=MsG0680035731.01.T01:cds;Parent=MsG0680035731.01.T01
Chr6 CDS 111299329 111300040 111299329 ID=MsG0680035731.01.T01:cds;Parent=MsG0680035731.01.T01
Chr6 CDS 111297761 111298394 111297761 ID=MsG0680035731.01.T01:cds;Parent=MsG0680035731.01.T01
Chr6 three_prime_UTR 111297536 111297760 111297536 ID=MsG0680035731.01.T01:three_prime_utr;Parent=MsG0680035731.01.T01
Gene Sequence

>MsG0680035731.01.T01

ATGAATCCCATAATATCATGCTCTGTCGGAAATTCTTCGGTTATTCCTGGAGTTGCCTATTTGACAAGAAAGAATAACTCGTTAACCAGACTCAACTTTTCAAGGAGTTCTTTAAGACACGGGTCATCAACTCGGAGATTTCTCTTTCCTTCATTTGTCGCCAATGGAGTTTTTCCTCAGAACAAGCGAATATGCTCTTACCGGAAAAATTCTCGAACTTCCATATCAGCCACAGAAACGGAAGTATCCGTGGAGGTACAAGATTCACCTGTTGCCAATGAAGTTTCTGGTGAATCTCCTTCAAATGAAGTTGGAACAAGTGAAGACTCATCTCCTAAGTCTGATGCCAACACTGGTTCTACGAAAGCCAAACGTTCAAGACCTGCAAGGAAAAGCGAAATGCCTCCTGTAAAGAATGAGGATTTGGTTCCCGGGGCAGCTTTTACGGGGAAAGTAAAATCTATCCAACCATTTGGTGCGTTTGTTGATTTCGGAGCTTTCACGGACGGACTTGTTCATATTTCAATGTTGAGTGATAGCTTTGTAAAGGATGTCTCAAGTGTTGTGTCTCTTGGACAAGAAGTTACGGTGAAGGTGATTGAAGTGAATGCTGAAACTAAGCGTATATCTCTATCTATGCGTGAAAACACTGATACTGGTAAACGTAATGATGCATCGAACAATGCAGAGAAATCCGGCTCTGGGAGGTGGGATTCTCCGAAATCGGGTCCAAGGAAAGATAAGAAAAACACAAAATTTGTTGTAGGTCAGGAGTTGCAGGGTACGGTGAAGAATATGACGAGGAGTGGTACTTTTATATCACTTCCTGAAGGAGAGGAAGGATTTCTACCATTAGCTGAGGAAGATGACGATGGATTTGGGAAGATAATGGGAAAATCTTCTTTGGAGATTGGTCGAGAAGTTAGCGTACGAGTTTTGCGTATCACAAGAGGACAAGCGACATTGACCATGAAGAAGGAAGGAGCTGTTGCAGAATTGGACAAGGCACTTGCACAAGTGGGTGATGACGTCGCAACAAACCCTTTTGTATTGGCTTTTCGTAGAAATAAGGATATTGCTAAATTTTTGGATCAGAGGGAGAAACTTCAGAGTGAAGTTAAATCATCAACTACAGAAACTGTGGAAGATTCACTGGTCGATTCCTCGACAACTGTTGTGGACGCTGAAAGCAACCAAGAAGGAAGTATTATAAATGGTGCCGCTGAGAAGGAAACAGAGGCGGTTGCTGAAAGTTTGGCTTCAGAAGAAGAATTAGATGCTGTAAATTCAATTATCGAGGAAGCTATTCAGACAGATATTGCAACAAGCAACGTTGAAACTGACTCACCGGTTGACGTGGCTGATGAAAGTTTAATAGAAACTGACTCACCGGTTGAAGTGGCTGATCAAATTGTTGCGGAAGATGAAAAACAATCAGAAACTGACAATGGAAAGGAAGAATTTGTAGCTGCAACCGAGGAAGATAATGATGCAGTTGAGCCTGGCCCTGTTGTTACAGAATCAGAGATTACGTCAAGTGCACCAGCTCCTCAAGAAACACCAGATGACAATGTTGCAGCTGTTTCAGAGAACAATGAGATTGATGCTAGTTTGTCCCCTGAGGAAAGCTTGAATAAAGATGTAATTGAAGAAACCAATCAACTTCCCTCTCCTGAAAGTCCTGCCACTGAAGAGGTGCAAGAACAAACACCTGTATCAGCACAAGTTGAAGATGAAGCAGTTGCAATTGCATCGGAGACAAACAGCACCTTATCTAACTCTAATGGACAAACTGGCATTACTGCTTCAGATGAAGGATCGAGTAAAGCAACTATATCACCAGCACTTGTGAAGCAACTTCGGGACGAAACAGGAGCTGGAATGATGGACTGCAAAAATGCTCTTTCTGAAAGTGAAGGTGACATTACCAAAGCACAAGAGCTCCTTAGAAAAAAAGGCTTAGCGAGTGCAGACAAGAAAGCAGCCAGAGCAACTGCCGAAGGAAGGATAGGTTCTTACATCCATGACAGCAGGATCGGTGTTTTGGTAGAAGTAAACTGCGAGACAGATTTTGTCTCTCGAGGTGAAATTTTCAAAGAGCTTGTCGATGATATAGCCATGCAAGTGGCTGCGTGCCCCCAAGTAGAGTACGTTGTTACTGAAGATGTTCCCGAGGAATTCGTGAAGAAAGAAACGAAGATAGAAATGCAAAAAGAAGATCTTGCGTCAAAACCGGAGCAAATTAGATCAAGGATTGTTGAAGGACGGATAAGGAAAAGACTTGAGGATTTAGCATTGCTTGAGCAGCCCTACATCAAGAATGATAAAGTGACAGTAAAGGATATGGTTAAGCAGACAATTGCAACTATTGGAGAAAATATGAAAGTTACAAGGTTTGTTCGGTTCAACCTCGGAGAGGGTTTGGAAAAGAAAAGCGAGGATTTTGCTGCTGAAGTCGCTGCACAAACTACAGCAAAACCGGTAACTACTCCAGTGAAAGAGGAGCCTGCTGCCGCAGAAGCCAAGGAGACTGAACCAAAGAAATCAGCAGTAGTGGTCTCAGCCGCTTTGGTTAAGCAACTACGAGAAGAAACCGGTGCAGGGATGATGGACTGTAAGAAAGCCCTTGCTGAAACTGAAGGTGATCTTGAAAAGGCGCAAGCATACCTCAGGAAAAAGGGCCTCTCATCCGCTGATAAGAAATCCGGAAGACTGGCAGCTGAAGGAAGAATCGGTACATACATTCACGATGCACGCATTGGTGTTCTAATTGAAGTGAACTGTGAAACCGACTTTGTTGGCAGAAGTGAGAAATTCAAGGAGTTGGTTGATGATCTTGCAATGCAAGTTGCTGCTTGTCCACAGGTTCAGTTTGTATCTATTGAAGATATTCCCGAAACTATTGTGACGAAGGAAAAAGAACTTGAGATGCAAAGAGAAGACCTTGCTTCGAAACCCGAGAACATTAGGGAGAAAATTGTCGAGGGAAGAATCTCAAAGAGGTTAGGAGAGCTTGCTCTTCTAGAGCAGCCTTTTATTAAGGATGACAGTGTTATAGTGAAAGACTTGGTTAGGCAAAGTATAGCTGCTATTGGAGAGAATATTAAAGTGCGGCGTTTTGTTCGGTTCACTCTTGGAGAAACAGTTCAAAAAGAAACAGCTGTACCAGCATAG

Protein sequence

>MsG0680035731.01.T01

MNPIISCSVGNSSVIPGVAYLTRKNNSLTRLNFSRSSLRHGSSTRRFLFPSFVANGVFPQNKRICSYRKNSRTSISATETEVSVEVQDSPVANEVSGESPSNEVGTSEDSSPKSDANTGSTKAKRSRPARKSEMPPVKNEDLVPGAAFTGKVKSIQPFGAFVDFGAFTDGLVHISMLSDSFVKDVSSVVSLGQEVTVKVIEVNAETKRISLSMRENTDTGKRNDASNNAEKSGSGRWDSPKSGPRKDKKNTKFVVGQELQGTVKNMTRSGTFISLPEGEEGFLPLAEEDDDGFGKIMGKSSLEIGREVSVRVLRITRGQATLTMKKEGAVAELDKALAQVGDDVATNPFVLAFRRNKDIAKFLDQREKLQSEVKSSTTETVEDSLVDSSTTVVDAESNQEGSIINGAAEKETEAVAESLASEEELDAVNSIIEEAIQTDIATSNVETDSPVDVADESLIETDSPVEVADQIVAEDEKQSETDNGKEEFVAATEEDNDAVEPGPVVTESEITSSAPAPQETPDDNVAAVSENNEIDASLSPEESLNKDVIEETNQLPSPESPATEEVQEQTPVSAQVEDEAVAIASETNSTLSNSNGQTGITASDEGSSKATISPALVKQLRDETGAGMMDCKNALSESEGDITKAQELLRKKGLASADKKAARATAEGRIGSYIHDSRIGVLVEVNCETDFVSRGEIFKELVDDIAMQVAACPQVEYVVTEDVPEEFVKKETKIEMQKEDLASKPEQIRSRIVEGRIRKRLEDLALLEQPYIKNDKVTVKDMVKQTIATIGENMKVTRFVRFNLGEGLEKKSEDFAAEVAAQTTAKPVTTPVKEEPAAAEAKETEPKKSAVVVSAALVKQLREETGAGMMDCKKALAETEGDLEKAQAYLRKKGLSSADKKSGRLAAEGRIGTYIHDARIGVLIEVNCETDFVGRSEKFKELVDDLAMQVAACPQVQFVSIEDIPETIVTKEKELEMQREDLASKPENIREKIVEGRISKRLGELALLEQPFIKDDSVIVKDLVRQSIAAIGENIKVRRFVRFTLGETVQKETAVPA*