AlfalfaGEDB | MsG0580024806.01

M. sativa cultivar ZhongmuNo.1 / MsG0580024806.01

KEGG: -
GO: -
PFAM: PF05911

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580024806.01.T01	XP_003611694.2	61.995	371	46	5	21	296	9	379	1.36E-127	397

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580024806.01.T01	Q9SLN1	43.299	97	50	1	166	257	329	425	3.00E-11	68.6

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580024806.01.T01	G7K5B5	61.995	371	46	5	21	296	9	379	6.48e-128	397

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048773.01	MsG0580024806.01	0.804596	2.002009e-49	1.036450e-46
MsG0180000114.01	MsG0580024806.01	0.803095	4.106163e-49	2.045211e-46
MsG0180000782.01	MsG0580024806.01	0.801107	1.052475e-48	4.984698e-46
MsG0180000784.01	MsG0580024806.01	0.808576	2.893872e-50	1.660597e-47
MsG0180000785.01	MsG0580024806.01	0.806626	7.508299e-50	4.094695e-47
MsG0180001100.01	MsG0580024806.01	0.815199	1.044602e-51	7.154620e-49
MsG0180001105.01	MsG0580024806.01	0.822568	2.210058e-53	1.856819e-50
MsG0180003353.01	MsG0580024806.01	0.814629	1.397463e-51	9.425692e-49
MsG0180003821.01	MsG0580024806.01	0.816101	6.579161e-52	4.619278e-49
MsG0180003885.01	MsG0580024806.01	0.813297	2.748957e-51	1.788283e-48
MsG0180004493.01	MsG0580024806.01	0.831098	2.023875e-55	2.174178e-52
MsG0180005429.01	MsG0580024806.01	0.800270	1.559282e-48	7.229571e-46
MsG0180005807.01	MsG0580024806.01	0.801471	8.863991e-49	4.236652e-46
MsG0180006104.01	MsG0580024806.01	0.825390	4.812850e-54	4.380692e-51
MsG0280010599.01	MsG0580024806.01	0.815493	8.987161e-52	6.205904e-49
MsG0280011073.01	MsG0580024806.01	0.800280	1.552212e-48	7.198664e-46
MsG0280011401.01	MsG0580024806.01	0.809069	2.270393e-50	1.319936e-47
MsG0480018911.01	MsG0580024806.01	0.817392	3.376396e-52	2.455863e-49
MsG0480019007.01	MsG0580024806.01	0.806289	8.843067e-50	4.781625e-47
MsG0480020024.01	MsG0580024806.01	0.822326	2.515097e-53	2.098476e-50
MsG0480020890.01	MsG0580024806.01	0.814587	1.427703e-51	9.618589e-49
MsG0480022624.01	MsG0580024806.01	0.808406	3.146836e-50	1.797822e-47
MsG0480023384.01	MsG0580024806.01	0.831481	1.629401e-55	1.770489e-52
MsG0580024806.01	MsG0580027655.01	0.821867	3.213150e-53	2.646021e-50
MsG0580024806.01	MsG0580029529.01	0.802628	5.126441e-49	2.523347e-46
MsG0580024806.01	MsG0580029736.01	0.835919	1.267693e-56	1.572694e-53
MsG0580024806.01	MsG0580029879.01	0.802592	5.215639e-49	2.564938e-46
MsG0580024806.01	MsG0580029919.01	0.828479	8.786574e-55	8.744173e-52
MsG0580024806.01	MsG0680032830.01	0.803843	2.872388e-49	1.458614e-46
MsG0580024806.01	MsG0680034235.01	0.846450	2.155583e-59	3.712069e-56
MsG0580024806.01	MsG0680034767.01	0.828877	7.040446e-55	7.086987e-52
MsG0580024806.01	MsG0780037330.01	0.822391	2.429155e-53	2.030613e-50
MsG0580024806.01	MsG0780038907.01	0.801645	8.164576e-49	3.919446e-46
MsG0580024806.01	MsG0780039155.01	0.809826	1.561445e-50	9.262608e-48
MsG0580024806.01	MsG0780039369.01	0.802889	4.528122e-49	2.243761e-46
MsG0580024806.01	MsG0780039439.01	0.805471	1.313469e-49	6.954863e-47
MsG0580024806.01	MsG0780040430.01	0.807692	4.464284e-50	2.502926e-47
MsG0580024806.01	MsG0780040431.01	0.800904	1.157873e-48	5.455831e-46
MsG0580024806.01	MsG0780041387.01	0.801442	8.988457e-49	4.292961e-46
MsG0580024806.01	MsG0780041482.01	0.849012	4.248724e-60	7.945116e-57
MsG0580024806.01	MsG0780041729.01	-0.812726	3.666581e-51	2.349092e-48
MsG0580024806.01	MsG0880045044.01	0.802519	5.399707e-49	2.650376e-46
MsG0580024806.01	MsG0880045558.01	0.806009	1.012836e-49	5.437810e-47
MsG0580024806.01	MsG0880047152.01	0.802736	4.870271e-49	2.403947e-46
MsG0580024806.01	MsG0880047696.01	0.827277	1.709901e-54	1.643096e-51
MsG0380016387.01	MsG0580024806.01	0.808197	3.485214e-50	1.980292e-47
MsG0380016740.01	MsG0580024806.01	0.804189	2.433819e-49	1.246854e-46
MsG0380017084.01	MsG0580024806.01	0.802561	5.291976e-49	2.600324e-46
MsG0480018402.01	MsG0580024806.01	0.804456	2.141901e-49	1.104862e-46
MsG0280007165.01	MsG0580024806.01	-0.808025	3.792026e-50	2.144749e-47
MsG0280007480.01	MsG0580024806.01	0.802638	5.102995e-49	2.512392e-46
MsG0280007531.01	MsG0580024806.01	0.814854	1.246434e-51	8.457585e-49
MsG0280007976.01	MsG0580024806.01	0.813029	3.147056e-51	2.032449e-48
MsG0280008113.01	MsG0580024806.01	0.812433	4.250462e-51	2.702342e-48
MsG0280008738.01	MsG0580024806.01	0.813584	2.377084e-51	1.558494e-48
MsG0280008765.01	MsG0580024806.01	0.806775	6.982711e-50	3.822798e-47
MsG0280008932.01	MsG0580024806.01	0.803626	3.187226e-49	1.609402e-46

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580024806.01.T01	MTR_5g016830	61.995	371	46	5	21	296	9	379	1.64e-131	397
MsG0580024806.01.T01	MTR_5g016830	86.486	37	5	0	306	342	525	561	2.16e-15	78.2
MsG0580024806.01.T01	MTR_4g094848	56.209	153	51	3	135	281	331	473	1.34e-33	132
MsG0580024806.01.T01	MTR_4g094848	34.101	217	74	4	16	171	4	212	6.30e-21	95.1
MsG0580024806.01.T01	MTR_4g094848	56.209	153	51	3	135	281	219	361	1.96e-33	132
MsG0580024806.01.T01	MTR_4g094848	48.936	94	38	1	78	171	17	100	3.35e-17	84.0

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580024806.01.T01	AT2G23360	43.299	97	50	1	166	257	329	425	3.06e-12	68.6

Find 53 sgRNAs with CRISPR-Local

Find 149 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GACAATGATCCCAAATGTTT+TGG	0.275589	5:-10006077	None:intergenic
ACCTTCAGATATAAACCTTA+TGG	0.282326	5:+10006115	MsG0580024806.01.T01:CDS
ATGTCATTGAAACATGTTTC+CGG	0.294403	5:-10006309	None:intergenic
GTTTAAAAGTCCAAAACATT+TGG	0.296321	5:+10006067	MsG0580024806.01.T01:CDS
GAAGCAAATAATGAAATAAT+TGG	0.299655	5:+10006212	MsG0580024806.01.T01:CDS
TCATTGTCATGCCAAAGTTT+TGG	0.300151	5:+10006092	MsG0580024806.01.T01:CDS
TACAGCTGCTTCGGAGAAAT+TGG	0.309261	5:+10007451	MsG0580024806.01.T01:CDS
TATGGATGATTTCATTGAAA+TGG	0.312296	5:+10006133	MsG0580024806.01.T01:CDS
TCCATTGCAAGAGTTATCTT+TGG	0.344872	5:+10005962	MsG0580024806.01.T01:CDS
TTTAAAAGTCCAAAACATTT+GGG	0.353219	5:+10006068	MsG0580024806.01.T01:CDS
CGATATGTGTTACAGTATAC+TGG	0.359514	5:+10006706	MsG0580024806.01.T01:intron
TAATGAAATAATTGGCTTCT+CGG	0.363720	5:+10006220	MsG0580024806.01.T01:CDS
AGCTATCAGAGAAAAGTAAA+AGG	0.370845	5:+10005621	MsG0580024806.01.T01:CDS
TCAACTGCTTCTCAAGGTTA+AGG	0.391161	5:-10007493	None:intergenic
TAGTCTGCTCTGATGCTACT+TGG	0.391970	5:-10005929	None:intergenic
TATTTCATTATTTGCTTCTA+CGG	0.406668	5:-10006207	None:intergenic
TTTCAATGAAATCATCCATA+AGG	0.409508	5:-10006130	None:intergenic
GTGATCGATAATCCATTTCA+TGG	0.417721	5:-10006774	None:intergenic
GGAATTCGCTGCATCGAATC+CGG	0.419142	5:+10006290	MsG0580024806.01.T01:CDS
AACTAACTACAGCCATGAAA+TGG	0.421739	5:+10006762	MsG0580024806.01.T01:CDS
GATCGTAATGCATTGATGAT+TGG	0.427232	5:+10005746	MsG0580024806.01.T01:CDS
TATCTGAAGGTCCAAAACTT+TGG	0.451418	5:-10006103	None:intergenic
TAACCTTGAGAAGCAGTTGA+AGG	0.457699	5:+10007496	MsG0580024806.01.T01:CDS
AATGGGAGATACAGCTGCTT+CGG	0.476965	5:+10007442	MsG0580024806.01.T01:CDS
GGATCAAAAGCAGTGGGAGG+GGG	0.494981	5:+10004722	MsG0580024806.01.T01:CDS
AATGTTCAAGAAGCAGTGTC+AGG	0.505727	5:+10005104	MsG0580024806.01.T01:CDS
CTGCTTCTCAAGGTTAAGGA+TGG	0.523429	5:-10007489	None:intergenic
TGGATCAAAAGCAGTGGGAG+GGG	0.526127	5:+10004721	MsG0580024806.01.T01:CDS
TGTTAGCTGTGGGGAATCCT+CGG	0.526902	5:+10006016	MsG0580024806.01.T01:CDS
TCCATAAGGTTTATATCTGA+AGG	0.537970	5:-10006116	None:intergenic
CATGGCTGTAGTTAGTTCTG+TGG	0.541228	5:-10006756	None:intergenic
TTGCCTTCAACTGCTTCTCA+AGG	0.543029	5:-10007499	None:intergenic
GCCAAAGATAACTCTTGCAA+TGG	0.544043	5:-10005963	None:intergenic
ATGGATCAAAAGCAGTGGGA+GGG	0.544417	5:+10004720	MsG0580024806.01.T01:CDS
TCTTACTTCAAATGAAAATG+AGG	0.549315	5:+10004790	MsG0580024806.01.T01:CDS
TTGTCTGATTCTGATAATCT+CGG	0.550097	5:+10006269	MsG0580024806.01.T01:CDS
GATCAAAAGCAGTGGGAGGG+GGG	0.552072	5:+10004723	MsG0580024806.01.T01:CDS
TTGGCATCAATGTCTTACAT+TGG	0.578470	5:+10005981	MsG0580024806.01.T01:CDS
TCCTAATGGATCAAAAGCAG+TGG	0.590014	5:+10004715	MsG0580024806.01.T01:CDS
TGAAATGGAAAAGTTAGCAG+TGG	0.590166	5:+10006148	MsG0580024806.01.T01:CDS
CCTAATGGATCAAAAGCAGT+GGG	0.599875	5:+10004716	MsG0580024806.01.T01:CDS
AATGGATCAAAAGCAGTGGG+AGG	0.615198	5:+10004719	MsG0580024806.01.T01:CDS
ACAATTGAATCAAGCAGACG+TGG	0.630883	5:+10005724	MsG0580024806.01.T01:CDS
TGAAATCAATGCAGAAGCCG+AGG	0.638690	5:-10006033	None:intergenic
GTGATGACAATGTTAGCTGT+GGG	0.639280	5:+10006006	MsG0580024806.01.T01:CDS
ATGTGTTACAGTATACTGGA+TGG	0.649581	5:+10006710	MsG0580024806.01.T01:intron
TACTTCAAATGAAAATGAGG+AGG	0.655261	5:+10004793	MsG0580024806.01.T01:CDS
TTACAGTATACTGGATGGCA+AGG	0.656212	5:+10006715	MsG0580024806.01.T01:intron
AGTGATGACAATGTTAGCTG+TGG	0.662733	5:+10006005	MsG0580024806.01.T01:CDS
AGATTATCAGAATCAGACAA+TGG	0.669966	5:-10006266	None:intergenic
CATTGATTTCAGAATCAGAG+CGG	0.682943	5:+10006045	MsG0580024806.01.T01:CDS
GGAAGCATGAGAAATTTCAG+TGG	0.720900	5:-10006186	None:intergenic
TGATGACAATGTTAGCTGTG+GGG	0.771666	5:+10006007	MsG0580024806.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AATTAATTTTATTTATATAT+TGG	+	Chr5:10004863-10004882	MsG0580024806.01.T01:intron	0.0%
!!	AACTAATATATATATATTGA+AGG	-	Chr5:10007207-10007226	None:intergenic	10.0%
!!	AAAATAATAGATGTTAGAAA+AGG	-	Chr5:10004832-10004851	None:intergenic	15.0%
!!!	TTGTTTTATTTTTCTGTTTT+AGG	+	Chr5:10004960-10004979	MsG0580024806.01.T01:intron	15.0%
!!	AGAGATATGAATAAATCAAT+AGG	+	Chr5:10006558-10006577	MsG0580024806.01.T01:intron	20.0%
!!	ATGTTTCAATGACATATTAA+AGG	+	Chr5:10006317-10006336	MsG0580024806.01.T01:intron	20.0%
!!	GAAGCAAATAATGAAATAAT+TGG	+	Chr5:10006212-10006231	MsG0580024806.01.T01:CDS	20.0%
!!	TATTTCATTATTTGCTTCTA+CGG	-	Chr5:10006210-10006229	None:intergenic	20.0%
!!	TCTTATAAAGTTTCATTTGA+AGG	+	Chr5:10005376-10005395	MsG0580024806.01.T01:intron	20.0%
!!	TGTTTCAATGACATATTAAA+GGG	+	Chr5:10006318-10006337	MsG0580024806.01.T01:intron	20.0%
!!	TTTAAAAGTCCAAAACATTT+GGG	+	Chr5:10006068-10006087	MsG0580024806.01.T01:CDS	20.0%
!!!	TTTTTTAAGAGCAGTTATAT+TGG	+	Chr5:10005351-10005370	MsG0580024806.01.T01:intron	20.0%
!	AAAATGATTGAGCTTATTGA+GGG	+	Chr5:10006582-10006601	MsG0580024806.01.T01:intron	25.0%
!	AAGATGTATTTAAGTGGTAT+TGG	+	Chr5:10006361-10006380	MsG0580024806.01.T01:intron	25.0%
!	AGTGAAAATGAAGCTAAAAT+TGG	+	Chr5:10006868-10006887	MsG0580024806.01.T01:intron	25.0%
!	ATAAAGTTTCATTTGAAGGA+TGG	+	Chr5:10005380-10005399	MsG0580024806.01.T01:intron	25.0%
!	ATATTAAAGGGTAATATTCC+TGG	+	Chr5:10006330-10006349	MsG0580024806.01.T01:intron	25.0%
!	CCATCAAAAGAAATTTGATT+GGG	+	Chr5:10006834-10006853	MsG0580024806.01.T01:intron	25.0%
!	GTTTAAAAGTCCAAAACATT+TGG	+	Chr5:10006067-10006086	MsG0580024806.01.T01:CDS	25.0%
!	TAAAGTTTCATTTGAAGGAT+GGG	+	Chr5:10005381-10005400	MsG0580024806.01.T01:intron	25.0%
!	TACAGAAACTGAATTAAAAG+AGG	+	Chr5:10007060-10007079	MsG0580024806.01.T01:intron	25.0%
!	TATAGAAGTGGTTATGATAA+GGG	+	Chr5:10005259-10005278	MsG0580024806.01.T01:intron	25.0%
!	TATGGATGATTTCATTGAAA+TGG	+	Chr5:10006133-10006152	MsG0580024806.01.T01:CDS	25.0%
!	TCTTACTTCAAATGAAAATG+AGG	+	Chr5:10004790-10004809	MsG0580024806.01.T01:CDS	25.0%
!	TGTACTTGAGGATATTAAAT+TGG	+	Chr5:10006417-10006436	MsG0580024806.01.T01:intron	25.0%
!	TTTCAATGAAATCATCCATA+AGG	-	Chr5:10006133-10006152	None:intergenic	25.0%
!	TTTCTTCATAAATTAGTTCC+TGG	-	Chr5:10005462-10005481	None:intergenic	25.0%
!!	GCAATACTGTAATATGATTT+TGG	+	Chr5:10007233-10007252	MsG0580024806.01.T01:intron	25.0%
!!	TAATGAAATAATTGGCTTCT+CGG	+	Chr5:10006220-10006239	MsG0580024806.01.T01:CDS	25.0%
!!	TTGAAGACTAATTTTCCTAA+TGG	+	Chr5:10004701-10004720	MsG0580024806.01.T01:CDS	25.0%
!!!	GATTCTAAAATGCAACTAAT+TGG	+	Chr5:10004924-10004943	MsG0580024806.01.T01:intron	25.0%
	ACCTTCAGATATAAACCTTA+TGG	+	Chr5:10006115-10006134	MsG0580024806.01.T01:CDS	30.0%
	AGATTATCAGAATCAGACAA+TGG	-	Chr5:10006269-10006288	None:intergenic	30.0%
	AGCTATCAGAGAAAAGTAAA+AGG	+	Chr5:10005621-10005640	MsG0580024806.01.T01:CDS	30.0%
	AGTGTCAAGATATCTACTTA+AGG	-	Chr5:10007035-10007054	None:intergenic	30.0%
	ATAACCACTTCTATAGTCAA+AGG	-	Chr5:10005254-10005273	None:intergenic	30.0%
	ATGTCATTGAAACATGTTTC+CGG	-	Chr5:10006312-10006331	None:intergenic	30.0%
	CAAAATGATTGAGCTTATTG+AGG	+	Chr5:10006581-10006600	MsG0580024806.01.T01:intron	30.0%
	CTATAGAAGTGGTTATGATA+AGG	+	Chr5:10005258-10005277	MsG0580024806.01.T01:intron	30.0%
	GCCATCAAAAGAAATTTGAT+TGG	+	Chr5:10006833-10006852	MsG0580024806.01.T01:intron	30.0%
	GGTTTCAAGATGTATTTAAG+TGG	+	Chr5:10006355-10006374	MsG0580024806.01.T01:intron	30.0%
	TAATACTTCTCTGATGTATG+AGG	+	Chr5:10005790-10005809	MsG0580024806.01.T01:intron	30.0%
	TACTATTGCCAACTTAAGAT+CGG	+	Chr5:10006950-10006969	MsG0580024806.01.T01:intron	30.0%
	TACTTCAAATGAAAATGAGG+AGG	+	Chr5:10004793-10004812	MsG0580024806.01.T01:CDS	30.0%
	TCCATAAGGTTTATATCTGA+AGG	-	Chr5:10006119-10006138	None:intergenic	30.0%
	TCTCTTTATCAATGAAGTCT+CGG	-	Chr5:10006520-10006539	None:intergenic	30.0%
	TCTGGCTGATAAAGAAAAAT+TGG	+	Chr5:10004993-10005012	MsG0580024806.01.T01:CDS	30.0%
	TGTCTAATTCTTCACAAAAG+TGG	-	Chr5:10007132-10007151	None:intergenic	30.0%
	TTGTCTGATTCTGATAATCT+CGG	+	Chr5:10006269-10006288	MsG0580024806.01.T01:CDS	30.0%
	TTTAGCATTAGAAGTGGAAT+TGG	+	Chr5:10007096-10007115	MsG0580024806.01.T01:intron	30.0%
!	AGAAATAGATTTTCCTGCTA+AGG	-	Chr5:10007378-10007397	None:intergenic	30.0%
!	CCCAATCAAATTTCTTTTGA+TGG	-	Chr5:10006837-10006856	None:intergenic	30.0%
!!	CAAGATTTTAGCATTAGAAG+TGG	+	Chr5:10007090-10007109	MsG0580024806.01.T01:intron	30.0%
!!	GTTTAATTTTCGCACACATT+CGG	+	Chr5:10005179-10005198	MsG0580024806.01.T01:intron	30.0%
	AACTAACTACAGCCATGAAA+TGG	+	Chr5:10006762-10006781	MsG0580024806.01.T01:CDS	35.0%
	AATACATCTTGAAACCAACC+AGG	-	Chr5:10006351-10006370	None:intergenic	35.0%
	AGCTGAAATGTTGTCAATGA+AGG	+	Chr5:10005414-10005433	MsG0580024806.01.T01:intron	35.0%
	AGGATTTGATGCTGTAATGA+AGG	+	Chr5:10005556-10005575	MsG0580024806.01.T01:intron	35.0%
	ATATCCTCAAGTACATCATC+AGG	-	Chr5:10006412-10006431	None:intergenic	35.0%
	ATGTGTTACAGTATACTGGA+TGG	+	Chr5:10006710-10006729	MsG0580024806.01.T01:intron	35.0%
	CGATATGTGTTACAGTATAC+TGG	+	Chr5:10006706-10006725	MsG0580024806.01.T01:intron	35.0%
	CGTTAATCAGAAAAATGAGC+CGG	+	Chr5:10007324-10007343	MsG0580024806.01.T01:intron	35.0%
	GTGATCGATAATCCATTTCA+TGG	-	Chr5:10006777-10006796	None:intergenic	35.0%
	TAAAGGGTAATATTCCTGGT+TGG	+	Chr5:10006334-10006353	MsG0580024806.01.T01:intron	35.0%
	TATCCTCAAGTACATCATCA+GGG	-	Chr5:10006411-10006430	None:intergenic	35.0%
	TATCTGAAGGTCCAAAACTT+TGG	-	Chr5:10006106-10006125	None:intergenic	35.0%
	TCAAACGTTTAATGATCCGT+CGG	+	Chr5:10005282-10005301	MsG0580024806.01.T01:intron	35.0%
	TCAAATGAAAATGAGGAGGT+AGG	+	Chr5:10004797-10004816	MsG0580024806.01.T01:intron	35.0%
	TCCATTGCAAGAGTTATCTT+TGG	+	Chr5:10005962-10005981	MsG0580024806.01.T01:CDS	35.0%
	TCTCAATCAATCATAACCGA+CGG	-	Chr5:10005301-10005320	None:intergenic	35.0%
	TGAAATGGAAAAGTTAGCAG+TGG	+	Chr5:10006148-10006167	MsG0580024806.01.T01:CDS	35.0%
	TGTTTGTTTACATATCCTGC+AGG	+	Chr5:10007419-10007438	MsG0580024806.01.T01:intron	35.0%
	TTATCTTCTCAGCACGAAAA+GGG	+	Chr5:10007285-10007304	MsG0580024806.01.T01:intron	35.0%
	TTGATCTTCAAGTCTTCTGT+TGG	-	Chr5:10006997-10007016	None:intergenic	35.0%
	TTGGCATCAATGTCTTACAT+TGG	+	Chr5:10005981-10006000	MsG0580024806.01.T01:CDS	35.0%
	TTTACATATCCTGCAGGAAT+GGG	+	Chr5:10007425-10007444	MsG0580024806.01.T01:intron	35.0%
	TTTATCTTCTCAGCACGAAA+AGG	+	Chr5:10007284-10007303	MsG0580024806.01.T01:intron	35.0%
!	ATGTTTTCCACTGAAAAGCA+CGG	-	Chr5:10006655-10006674	None:intergenic	35.0%
!	GACAATGATCCCAAATGTTT+TGG	-	Chr5:10006080-10006099	None:intergenic	35.0%
!	GATCGTAATGCATTGATGAT+TGG	+	Chr5:10005746-10005765	MsG0580024806.01.T01:CDS	35.0%
!	GCAGTTACATTTTGTTAGAG+AGG	+	Chr5:10005522-10005541	MsG0580024806.01.T01:intron	35.0%
!	TCATTGTCATGCCAAAGTTT+TGG	+	Chr5:10006092-10006111	MsG0580024806.01.T01:CDS	35.0%
!	TGCATTGATCTGGATTATTC+AGG	-	Chr5:10006453-10006472	None:intergenic	35.0%
!!	CATCTGTTTTATTCCTTAGC+AGG	+	Chr5:10007362-10007381	MsG0580024806.01.T01:intron	35.0%
!!	CATTGATTTCAGAATCAGAG+CGG	+	Chr5:10006045-10006064	MsG0580024806.01.T01:CDS	35.0%
	AAACTGTTGCAACTTGAGTC+TGG	+	Chr5:10005890-10005909	MsG0580024806.01.T01:intron	40.0%
	AACTTCAGCTTCAGCTTGAA+AGG	+	Chr5:10007164-10007183	MsG0580024806.01.T01:intron	40.0%
	AATGTTCAAGAAGCAGTGTC+AGG	+	Chr5:10005104-10005123	MsG0580024806.01.T01:CDS	40.0%
	ACAATTGAATCAAGCAGACG+TGG	+	Chr5:10005724-10005743	MsG0580024806.01.T01:CDS	40.0%
	ACATTTGGATCGTACTCTCA+AGG	+	Chr5:10005489-10005508	MsG0580024806.01.T01:intron	40.0%
	AGTGATGACAATGTTAGCTG+TGG	+	Chr5:10006005-10006024	MsG0580024806.01.T01:CDS	40.0%
	CATGCCTTTGACTATAGAAG+TGG	+	Chr5:10005247-10005266	MsG0580024806.01.T01:intron	40.0%
	CTGTAAGACATCCCTCAAAT+CGG	-	Chr5:10006678-10006697	None:intergenic	40.0%
	GAATTGTCGTTATCGTCAAC+AGG	-	Chr5:10006617-10006636	None:intergenic	40.0%
	GATCAATGCACGTTAGATTC+AGG	+	Chr5:10006463-10006482	MsG0580024806.01.T01:intron	40.0%
	GATGAACTTACATTTCGCAC+CGG	-	Chr5:10007346-10007365	None:intergenic	40.0%
	GCCAAAGATAACTCTTGCAA+TGG	-	Chr5:10005966-10005985	None:intergenic	40.0%
	GTACTCTCAAGGAATGTATG+CGG	+	Chr5:10005500-10005519	MsG0580024806.01.T01:intron	40.0%
	GTGATGACAATGTTAGCTGT+GGG	+	Chr5:10006006-10006025	MsG0580024806.01.T01:CDS	40.0%
	GTTTACATATCCTGCAGGAA+TGG	+	Chr5:10007424-10007443	MsG0580024806.01.T01:intron	40.0%
	TAACCTTGAGAAGCAGTTGA+AGG	+	Chr5:10007496-10007515	MsG0580024806.01.T01:CDS	40.0%
	TCAACTGCTTCTCAAGGTTA+AGG	-	Chr5:10007496-10007515	None:intergenic	40.0%
	TCTGCTGGAATATTGTGTTG+AGG	+	Chr5:10007395-10007414	MsG0580024806.01.T01:intron	40.0%
	TGAAGAAAGAGTCGCACATT+TGG	+	Chr5:10005474-10005493	MsG0580024806.01.T01:intron	40.0%
	TGATGACAATGTTAGCTGTG+GGG	+	Chr5:10006007-10006026	MsG0580024806.01.T01:CDS	40.0%
	TTACAGTATACTGGATGGCA+AGG	+	Chr5:10006715-10006734	MsG0580024806.01.T01:intron	40.0%
	TTAGAGAGGAACAAGAGCAA+AGG	+	Chr5:10005536-10005555	MsG0580024806.01.T01:intron	40.0%
	TTGCAACTCCGATCTTAAGT+TGG	-	Chr5:10006961-10006980	None:intergenic	40.0%
!	AACAGATACGAGTCGATTTC+AGG	+	Chr5:10006917-10006936	MsG0580024806.01.T01:intron	40.0%
!	AGTGGAAAACATCCGATTTG+AGG	+	Chr5:10006663-10006682	MsG0580024806.01.T01:intron	40.0%
!	CCTAATGGATCAAAAGCAGT+GGG	+	Chr5:10004716-10004735	MsG0580024806.01.T01:CDS	40.0%
!	GAATCTAACGTGCATTGATC+TGG	-	Chr5:10006463-10006482	None:intergenic	40.0%
!	GGAAGCATGAGAAATTTCAG+TGG	-	Chr5:10006189-10006208	None:intergenic	40.0%
!	GTGGAAAACATCCGATTTGA+GGG	+	Chr5:10006664-10006683	MsG0580024806.01.T01:intron	40.0%
!	TAACCCTGATGATGTACTTG+AGG	+	Chr5:10006405-10006424	MsG0580024806.01.T01:intron	40.0%
!	TCCTAATGGATCAAAAGCAG+TGG	+	Chr5:10004715-10004734	MsG0580024806.01.T01:CDS	40.0%
!	TGAAAAGCACGGATCATGAA+GGG	-	Chr5:10006644-10006663	None:intergenic	40.0%
!	TTGGGATGTTTCAAGTATGG+AGG	+	Chr5:10006808-10006827	MsG0580024806.01.T01:intron	40.0%
!!	CTCTGATGCTACTTGGTTTT+TGG	-	Chr5:10005925-10005944	None:intergenic	40.0%
!!	GCAGGAAAATCTATTTCTGC+TGG	+	Chr5:10007380-10007399	MsG0580024806.01.T01:intron	40.0%
!!	GCTTTGGGATGTTTCAAGTA+TGG	+	Chr5:10006805-10006824	MsG0580024806.01.T01:intron	40.0%
	AATGGATCAAAAGCAGTGGG+AGG	+	Chr5:10004719-10004738	MsG0580024806.01.T01:CDS	45.0%
	AATGGGAGATACAGCTGCTT+CGG	+	Chr5:10007442-10007461	MsG0580024806.01.T01:CDS	45.0%
	ATGGATCAAAAGCAGTGGGA+GGG	+	Chr5:10004720-10004739	MsG0580024806.01.T01:CDS	45.0%
	CTGCTTCTCAAGGTTAAGGA+TGG	-	Chr5:10007492-10007511	None:intergenic	45.0%
	GTCAATGAAGGAACATCTCG+AGG	+	Chr5:10005426-10005445	MsG0580024806.01.T01:intron	45.0%
	TACAGCTGCTTCGGAGAAAT+TGG	+	Chr5:10007451-10007470	MsG0580024806.01.T01:CDS	45.0%
	TAGTCTGCTCTGATGCTACT+TGG	-	Chr5:10005932-10005951	None:intergenic	45.0%
	TCTCGAGGAATCTATACACC+AGG	+	Chr5:10005441-10005460	MsG0580024806.01.T01:intron	45.0%
	TGAAATCAATGCAGAAGCCG+AGG	-	Chr5:10006036-10006055	None:intergenic	45.0%
	TGAGGCTCAAGTGCTTCAAA+AGG	+	Chr5:10005808-10005827	MsG0580024806.01.T01:intron	45.0%
	TTGCCTTCAACTGCTTCTCA+AGG	-	Chr5:10007502-10007521	None:intergenic	45.0%
!	CTGAAAAGCACGGATCATGA+AGG	-	Chr5:10006645-10006664	None:intergenic	45.0%
!	TCATGATCCGTGCTTTTCAG+TGG	+	Chr5:10006645-10006664	MsG0580024806.01.T01:intron	45.0%
!!	CATGGCTGTAGTTAGTTCTG+TGG	-	Chr5:10006759-10006778	None:intergenic	45.0%
!!	CCCACTGCTTTTGATCCATT+AGG	-	Chr5:10004719-10004738	None:intergenic	45.0%
!!	CGATCACTGCTTTTCGCTTT+GGG	+	Chr5:10006790-10006809	MsG0580024806.01.T01:CDS	45.0%
!!	GTTTTAGGTGCATGCACTTC+TGG	+	Chr5:10004975-10004994	MsG0580024806.01.T01:intron	45.0%
!!	TCGATCACTGCTTTTCGCTT+TGG	+	Chr5:10006789-10006808	MsG0580024806.01.T01:CDS	45.0%
!!!	TCAAGCTCGCGTTGTTTTAG+AGG	+	Chr5:10005595-10005614	MsG0580024806.01.T01:CDS	45.0%
	GGAATTCGCTGCATCGAATC+CGG	+	Chr5:10006290-10006309	MsG0580024806.01.T01:CDS	50.0%
	TGGATCAAAAGCAGTGGGAG+GGG	+	Chr5:10004721-10004740	MsG0580024806.01.T01:CDS	50.0%
	TGTTAGCTGTGGGGAATCCT+CGG	+	Chr5:10006016-10006035	MsG0580024806.01.T01:CDS	50.0%
!	ACGAAAAGGGCACGCTCAAA+TGG	+	Chr5:10007298-10007317	MsG0580024806.01.T01:intron	50.0%
	GATCAAAAGCAGTGGGAGGG+GGG	+	Chr5:10004723-10004742	MsG0580024806.01.T01:CDS	55.0%
	GCTGTATCTCCCATTCCTGC+AGG	-	Chr5:10007437-10007456	None:intergenic	55.0%
	GGATCAAAAGCAGTGGGAGG+GGG	+	Chr5:10004722-10004741	MsG0580024806.01.T01:CDS	55.0%
	GGGAGGGGGGAAAAAGACAA+GGG	+	Chr5:10004736-10004755	MsG0580024806.01.T01:CDS	55.0%
	TGGGAGGGGGGAAAAAGACA+AGG	+	Chr5:10004735-10004754	MsG0580024806.01.T01:CDS	55.0%

Chromosome	Type	Strat	End	Strand	Name
Chr5	gene	10004683	10007544	10004683	ID=MsG0580024806.01;Name=MsG0580024806.01
Chr5	mRNA	10004683	10007544	10004683	ID=MsG0580024806.01.T01;Parent=MsG0580024806.01;Name=MsG0580024806.01.T01;_AED=0.35;_eAED=0.35;_QI=0\|0\|0\|1\|0.6\|0.5\|6\|0\|372
Chr5	exon	10004683	10004814	10004683	ID=MsG0580024806.01.T01:exon:1598;Parent=MsG0580024806.01.T01
Chr5	exon	10004982	10005125	10004982	ID=MsG0580024806.01.T01:exon:1599;Parent=MsG0580024806.01.T01
Chr5	exon	10005578	10005804	10005578	ID=MsG0580024806.01.T01:exon:1600;Parent=MsG0580024806.01.T01
Chr5	exon	10005908	10006318	10005908	ID=MsG0580024806.01.T01:exon:1601;Parent=MsG0580024806.01.T01
Chr5	exon	10006721	10006821	10006721	ID=MsG0580024806.01.T01:exon:1602;Parent=MsG0580024806.01.T01
Chr5	exon	10007441	10007544	10007441	ID=MsG0580024806.01.T01:exon:1603;Parent=MsG0580024806.01.T01
Chr5	CDS	10004683	10004814	10004683	ID=MsG0580024806.01.T01:cds;Parent=MsG0580024806.01.T01
Chr5	CDS	10004982	10005125	10004982	ID=MsG0580024806.01.T01:cds;Parent=MsG0580024806.01.T01
Chr5	CDS	10005578	10005804	10005578	ID=MsG0580024806.01.T01:cds;Parent=MsG0580024806.01.T01
Chr5	CDS	10005908	10006318	10005908	ID=MsG0580024806.01.T01:cds;Parent=MsG0580024806.01.T01
Chr5	CDS	10006721	10006821	10006721	ID=MsG0580024806.01.T01:cds;Parent=MsG0580024806.01.T01
Chr5	CDS	10007441	10007544	10007441	ID=MsG0580024806.01.T01:cds;Parent=MsG0580024806.01.T01

Gene Sequence

>MsG0580024806.01.T01

ATGCAGAATCAGCATAATTTGAAGACTAATTTTCCTAATGGATCAAAAGCAGTGGGAGGGGGGAAAAAGACAAGGGAGAAAACAATTTTAGAAACAGACAAAGCAAATCTTACTTCAAATGAAAATGAGGAGGTGCATGCACTTCTGGCTGATAAAGAAAAATTGGAGAAAGAATTAAAAAGATTAAATGATAAGCTTGTTTTTACACTCTCTGAATGTAATGCTAAAGATGATTATATGAAGAAACAAACAAAAATGTTCAAGAAGCAGTGTCAGGTTTCTGTAGAATTCGATCAAGCTCGCGTTGTTTTAGAGGAGAAGCTATCAGAGAAAAGTAAAAGGCTTGCTAAAACTGTGATTGAAAATTCTTATCTTAACAAATCTATTATCGCGAAAGACAATTTGATTGATGATCTGAGAAGACAATTGAATCAAGCAGACGTGGATCGTAATGCATTGATGATTGGATTAGAGTCTGTTGAGAAAGATAATACTTCTCTGATTCTGGAGATTGAATCCAAAAACCAAGTAGCATCAGAGCAGACTAGAAGTAATGTTCCATTGCAAGAGTTATCTTTGGCATCAATGTCTTACATTGGCAGTGATGACAATGTTAGCTGTGGGGAATCCTCGGCTTCTGCATTGATTTCAGAATCAGAGCGGTTTAAAAGTCCAAAACATTTGGGATCATTGTCATGCCAAAGTTTTGGACCTTCAGATATAAACCTTATGGATGATTTCATTGAAATGGAAAAGTTAGCAGTGGTTTCTGTCGAAAAAGCCACTGAAATTTCTCATGCTTCCGTAGAAGCAAATAATGAAATAATTGGCTTCTCGGAGACTATACTAGATGAGATCAGTCCATTGTCTGATTCTGATAATCTCGGAATTCGCTGCATCGAATCCGGAAACATTATACTGGATGGCAAGGCTGATCATGAAAGATTTGCCACAGAACTAACTACAGCCATGAAATGGATTATCGATCACTGCTTTTCGCTTTGGGATGTTTCAAGAATGGGAGATACAGCTGCTTCGGAGAAATTGGCAGAGTGTCAAGAAACCATCCTTAACCTTGAGAAGCAGTTGAAGGCAATTGCTGCAACAACAGATGTGTGA

Protein sequence

>MsG0580024806.01.T01

MQNQHNLKTNFPNGSKAVGGGKKTREKTILETDKANLTSNENEEVHALLADKEKLEKELKRLNDKLVFTLSECNAKDDYMKKQTKMFKKQCQVSVEFDQARVVLEEKLSEKSKRLAKTVIENSYLNKSIIAKDNLIDDLRRQLNQADVDRNALMIGLESVEKDNTSLILEIESKNQVASEQTRSNVPLQELSLASMSYIGSDDNVSCGESSASALISESERFKSPKHLGSLSCQSFGPSDINLMDDFIEMEKLAVVSVEKATEISHASVEANNEIIGFSETILDEISPLSDSDNLGIRCIESGNIILDGKADHERFATELTTAMKWIIDHCFSLWDVSRMGDTAASEKLAECQETILNLEKQLKAIAATTDV*