AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780039439.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780039439.01.T01 MTR_7g073650 91.224 433 12 3 1 432 1 408 0.0 801
MsG0780039439.01.T01 MTR_7g073640 86.183 427 30 5 9 432 9 409 0.0 740
MsG0780039439.01.T01 MTR_6g069140 61.772 395 125 3 36 430 51 419 2.72e-180 509
MsG0780039439.01.T01 MTR_6g086625 57.611 427 150 4 9 430 5 405 1.09e-179 507
MsG0780039439.01.T01 MTR_6g086575 57.981 426 147 6 9 430 7 404 8.59e-179 505
MsG0780039439.01.T01 MTR_1g077520 58.080 427 149 5 9 432 10 409 2.72e-178 504
MsG0780039439.01.T01 MTR_1g077480 60.506 395 130 3 36 430 43 411 2.98e-178 504
MsG0780039439.01.T01 MTR_3g094160 54.502 422 163 4 12 430 30 425 7.36e-159 456
MsG0780039439.01.T01 MTR_1g077520 60.000 350 113 3 9 356 10 334 1.95e-148 426
MsG0780039439.01.T01 MTR_0279s0030 90.400 125 11 1 309 432 101 225 7.19e-75 233
MsG0780039439.01.T01 MTR_0279s0030 90.400 125 11 1 309 432 185 309 2.42e-73 233
MsG0780039439.01.T01 MTR_0279s0030 90.400 125 11 1 309 432 250 374 6.55e-73 234
MsG0780039439.01.T01 MTR_1g078410 64.706 119 42 0 119 237 60 178 2.42e-48 163
MsG0780039439.01.T01 MTR_8g089745 24.747 396 215 12 10 340 8 385 2.07e-18 87.8
MsG0780039439.01.T01 MTR_2g096530 25.505 396 210 13 12 337 5 385 4.16e-18 87.0
MsG0780039439.01.T01 MTR_8g089745 24.747 396 215 12 10 340 8 385 5.12e-18 87.0
MsG0780039439.01.T01 MTR_8g089725 24.684 474 252 17 51 428 38 502 9.30e-17 82.8
MsG0780039439.01.T01 MTR_8g089735 24.473 474 253 17 51 428 38 502 4.71e-16 80.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780039439.01.T01 AT5G08380 71.495 428 97 2 5 432 8 410 0.0 632
MsG0780039439.01.T01 AT5G08370 58.432 421 144 5 9 428 1 391 1.07e-180 509
MsG0780039439.01.T01 AT5G08370 61.893 391 123 3 38 428 1 365 1.29e-180 508
MsG0780039439.01.T01 AT5G08380 72.156 334 68 2 5 338 8 316 1.08e-174 491
MsG0780039439.01.T01 AT3G56310 55.366 410 154 4 24 430 46 429 1.19e-157 452
MsG0780039439.01.T01 AT3G56310 51.951 410 144 4 24 430 46 405 7.20e-143 414

Find 116 sgRNAs with CRISPR-Local

Find 336 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGCAGGCTCCTCTTCTTCT+AGG 0.178877 7:+64100937 MsG0780039439.01.T01:intron
TTGGAAGCATTGTTGATAAT+TGG 0.188347 7:+64101876 MsG0780039439.01.T01:three_prime_UTR
ATTTGGGATGGTGGTGGTTT+TGG 0.204016 7:+64098157 MsG0780039439.01.T01:CDS
CTGGTGACATAACTGATAAT+TGG 0.210872 7:+64100232 MsG0780039439.01.T01:CDS
ATATGGGCAGGTCCTCTTTC+AGG 0.213190 7:+64101436 MsG0780039439.01.T01:CDS
TGTGTCACTGCTTCATCATT+AGG 0.260692 7:+64098206 MsG0780039439.01.T01:CDS
AGATTAATGTAACAGCTAAT+TGG 0.263880 7:+64101500 MsG0780039439.01.T01:CDS
CGAACTTAATCGCGATAATA+AGG 0.278598 7:+64098911 MsG0780039439.01.T01:CDS
GAGATATGCATCCAGCTAAA+TGG 0.281278 7:+64100178 MsG0780039439.01.T01:CDS
GTTACATAGATTGGAGCTTT+TGG 0.297553 7:+64101857 MsG0780039439.01.T01:three_prime_UTR
ATGAGGAGTAGGATTGGATT+TGG 0.319747 7:+64098140 MsG0780039439.01.T01:CDS
TACCCATGATGCAAAAGTTT+TGG 0.334662 7:-64099280 None:intergenic
GTGTCACTGCTTCATCATTA+GGG 0.339417 7:+64098207 MsG0780039439.01.T01:CDS
TGAGGAGTAGGATTGGATTT+GGG 0.340475 7:+64098141 MsG0780039439.01.T01:CDS
TTTCCAACCTCAAGCATATC+AGG 0.349661 7:-64100577 None:intergenic
CTTATTATCGCGATTAAGTT+CGG 0.355063 7:-64098910 None:intergenic
TTGGCTATAAATAAAGATAA+GGG 0.376770 7:+64098061 MsG0780039439.01.T01:intron
TTGTTCAAGCAAGAGACCTT+TGG 0.381720 7:+64101551 MsG0780039439.01.T01:CDS
CTTGGAGATAGTCTCTAATA+AGG 0.383311 7:+64100990 MsG0780039439.01.T01:CDS
GCTGTTGTGTTGCTTAATAA+AGG 0.393013 7:+64101469 MsG0780039439.01.T01:CDS
TGTTCAAGCAAGAGACCTTT+GGG 0.394528 7:+64101552 MsG0780039439.01.T01:CDS
AGATATGCATCCAGCTAAAT+GGG 0.395124 7:+64100179 MsG0780039439.01.T01:CDS
ATAAATGTCAACTTGTACAT+TGG 0.398174 7:+64101929 MsG0780039439.01.T01:three_prime_UTR
GATTAATGTAACAGCTAATT+GGG 0.410058 7:+64101501 MsG0780039439.01.T01:CDS
AGGTCCTCTTTCAGGATATA+GGG 0.411330 7:+64101444 MsG0780039439.01.T01:CDS
GCTGATGCCCTTGTTTCAAC+TGG 0.414005 7:+64098718 MsG0780039439.01.T01:intron
CAGGTCCTCTTTCAGGATAT+AGG 0.414530 7:+64101443 MsG0780039439.01.T01:CDS
ATGAGAAAATACCAGTTTCT+CGG 0.417413 7:-64098541 None:intergenic
GATTGGATTTGGGATGGTGG+TGG 0.417631 7:+64098151 MsG0780039439.01.T01:CDS
TTTGGCTATAAATAAAGATA+AGG 0.418122 7:+64098060 MsG0780039439.01.T01:intron
TAGAACACAGTTACATAGAT+TGG 0.420957 7:+64101848 MsG0780039439.01.T01:three_prime_UTR
ATTAAAGCCCGAGTCATAAC+AGG 0.421626 7:-64099870 None:intergenic
TGTTATACAGGTGGAATAGT+TGG 0.421868 7:+64098483 MsG0780039439.01.T01:intron
CCTTGGTAAAACTCCTCCTA+TGG 0.424348 7:+64098277 MsG0780039439.01.T01:CDS
TATCGTTCACTTCAGTTTGT+GGG 0.428514 7:+64100624 MsG0780039439.01.T01:CDS
TGGTGACATAACTGATAATT+GGG 0.429981 7:+64100233 MsG0780039439.01.T01:CDS
ATATCGTTCACTTCAGTTTG+TGG 0.432561 7:+64100623 MsG0780039439.01.T01:CDS
TTGTTGCTGCAGATGATTGT+TGG 0.434548 7:+64098886 MsG0780039439.01.T01:CDS
AGAAGAAACCTTCTTGCTAA+TGG 0.435698 7:+64098254 MsG0780039439.01.T01:CDS
ACTTTAGCACCCCATTTAGC+TGG 0.437464 7:-64100189 None:intergenic
AACCTTCTTGCTAATGGCCT+TGG 0.440891 7:+64098260 MsG0780039439.01.T01:CDS
AAACCAACCAAACATGCAAA+AGG 0.441393 7:-64098184 None:intergenic
AGCTAAATGGGGTGCTAAAG+TGG 0.444772 7:+64100191 MsG0780039439.01.T01:CDS
TAGGATTGGATTTGGGATGG+TGG 0.448588 7:+64098148 MsG0780039439.01.T01:CDS
CTTGGAATTTATTCAGATGC+AGG 0.449478 7:+64099120 MsG0780039439.01.T01:CDS
GTGCTAAAGTGGGAAATAGT+TGG 0.469009 7:+64100202 MsG0780039439.01.T01:CDS
TACCAAGGCCATTAGCAAGA+AGG 0.473441 7:-64098262 None:intergenic
TGTTGCTGCAGATGATTGTT+GGG 0.474807 7:+64098887 MsG0780039439.01.T01:CDS
TTATGTACCTATGTTGACAT+AGG 0.479023 7:-64098761 None:intergenic
TAAAGTAAAGTGAAGTGAAG+TGG 0.484137 7:+64098109 MsG0780039439.01.T01:five_prime_UTR
CATAGCAAGGGTCTTAAGCT+TGG 0.485258 7:+64099102 MsG0780039439.01.T01:CDS
TCACATAGCGAAAAGAAGAT+TGG 0.486370 7:-64099906 None:intergenic
CAGTTTGTGGGCTATTTCAA+AGG 0.488558 7:+64100636 MsG0780039439.01.T01:CDS
ATGCTTGAGGTTGGAAATGG+AGG 0.493055 7:+64100583 MsG0780039439.01.T01:CDS
GATATGCTTGAGGTTGGAAA+TGG 0.493237 7:+64100580 MsG0780039439.01.T01:CDS
ACATGTAGCAAACAAATGCC+TGG 0.496161 7:+64099231 MsG0780039439.01.T01:CDS
GCGTACAAGCTAAGAAGGTC+AGG 0.502077 7:+64101129 MsG0780039439.01.T01:CDS
GGAAATAGTTGGAGAACTAC+TGG 0.506903 7:+64100213 MsG0780039439.01.T01:CDS
TATGACTCGGGCTTTAATGA+AGG 0.508006 7:+64099875 MsG0780039439.01.T01:CDS
TGCAGATTATGTTCATAGCA+AGG 0.510065 7:+64099089 MsG0780039439.01.T01:CDS
TCAACTGGTCTATCTAAGCT+TGG 0.514706 7:+64098733 MsG0780039439.01.T01:CDS
CTTACACGCATGTGATTCTA+CGG 0.515503 7:-64101786 None:intergenic
TACACAATGAGGAGTAGGAT+TGG 0.519358 7:+64098134 MsG0780039439.01.T01:exon
AAACAAATGCCTGGTTCACT+AGG 0.520373 7:+64099240 MsG0780039439.01.T01:CDS
CTTGGTAAAACTCCTCCTAT+GGG 0.521865 7:+64098278 MsG0780039439.01.T01:CDS
GCTGTTACATTAATCTTCTG+AGG 0.525815 7:-64101493 None:intergenic
AGCTTGCAAGACCTGGTGGT+TGG 0.526013 7:+64100437 MsG0780039439.01.T01:CDS
AAATGTGACTAAAGAGACCT+TGG 0.527242 7:+64100972 MsG0780039439.01.T01:CDS
GATCCTGATATGCTTGAGGT+TGG 0.538064 7:+64100574 MsG0780039439.01.T01:CDS
TCATTAGGGAACAACTATGA+TGG 0.538551 7:+64098221 MsG0780039439.01.T01:CDS
GCAAGACCTGGTGGTTGGAA+TGG 0.539179 7:+64100442 MsG0780039439.01.T01:CDS
TTTGTTGGATAGATATGGGC+AGG 0.543001 7:+64101424 MsG0780039439.01.T01:intron
AGATCACAGCCTAGAAGAAG+AGG 0.543289 7:-64100946 None:intergenic
GCAGATTATGTTCATAGCAA+GGG 0.548297 7:+64099090 MsG0780039439.01.T01:CDS
GCTAAGAAGGTCAGGATGGA+AGG 0.549045 7:+64101137 MsG0780039439.01.T01:CDS
TAGATAGACCAGTTGAAACA+AGG 0.549426 7:-64098726 None:intergenic
TATGCTGAGCTTGCAAGACC+TGG 0.553013 7:+64100430 MsG0780039439.01.T01:CDS
TTGGAATTTATTCAGATGCA+GGG 0.559186 7:+64099121 MsG0780039439.01.T01:CDS
GCTACCCTATATCCTGAAAG+AGG 0.563682 7:-64101448 None:intergenic
AACCAACCAAACATGCAAAA+GGG 0.563850 7:-64098183 None:intergenic
GCTTGGCGTACAAGCTAAGA+AGG 0.563892 7:+64101124 MsG0780039439.01.T01:CDS
TGGAGTACACAATGAGGAGT+AGG 0.565957 7:+64098129 MsG0780039439.01.T01:exon
AACTCATGACCTAGTGAACC+AGG 0.568821 7:-64099249 None:intergenic
TTGACTACCTACCTCACAGT+GGG 0.572699 7:-64099734 None:intergenic
ATAGGTATCCTGTTATGACT+CGG 0.573894 7:+64099862 MsG0780039439.01.T01:intron
TAGGTATCCTGTTATGACTC+GGG 0.579107 7:+64099863 MsG0780039439.01.T01:intron
ACTCGGGCTTTAATGAAGGC+AGG 0.580189 7:+64099879 MsG0780039439.01.T01:CDS
GGATACACCTATGTCAACAT+AGG 0.584008 7:+64098754 MsG0780039439.01.T01:CDS
CTTCAGTTGAAATGAGAGAG+AGG 0.584142 7:-64098086 None:intergenic
TTTATGCAGTATGATTTCAA+GGG 0.593167 7:+64100390 MsG0780039439.01.T01:intron
CTTATTAGAGACTATCTCCA+AGG 0.595408 7:-64100989 None:intergenic
TTCAGTTGAAATGAGAGAGA+GGG 0.601273 7:-64098085 None:intergenic
GCTAAATGGGGTGCTAAAGT+GGG 0.605638 7:+64100192 MsG0780039439.01.T01:CDS
GAGTAGGATTGGATTTGGGA+TGG 0.606209 7:+64098145 MsG0780039439.01.T01:CDS
ACATAACTGATAATTGGGAA+AGG 0.607718 7:+64100238 MsG0780039439.01.T01:CDS
TACAATGAATTACCTCCCAA+AGG 0.608422 7:-64101567 None:intergenic
AACAGATCCTGATATGCTTG+AGG 0.609688 7:+64100570 MsG0780039439.01.T01:CDS
TTCTAACCATTCCAACCACC+AGG 0.610518 7:-64100448 None:intergenic
TATCACACGATAGATTCGCT+TGG 0.610905 7:+64101107 MsG0780039439.01.T01:intron
GCAAGAGCTTTGATGCCAGA+AGG 0.611987 7:-64099069 None:intergenic
GCTGAGCTTGCAAGACCTGG+TGG 0.617565 7:+64100433 MsG0780039439.01.T01:CDS
ACAGCTAATTGGGATGACAT+TGG 0.629945 7:+64101511 MsG0780039439.01.T01:CDS
ACAAGCTAAGAAGGTCAGGA+TGG 0.630101 7:+64101133 MsG0780039439.01.T01:CDS
TGCTTGAGGTTGGAAATGGA+GGG 0.639239 7:+64100584 MsG0780039439.01.T01:CDS
TACGAGCATTGCAATCATTG+CGG 0.639814 7:+64102008 MsG0780039439.01.T01:three_prime_UTR
GAAGTTATTACAGTTAACCA+AGG 0.643404 7:+64101012 MsG0780039439.01.T01:CDS
AGATAGACCAGTTGAAACAA+GGG 0.645698 7:-64098725 None:intergenic
CAGGATGGAAGGTGATGCTG+AGG 0.646471 7:+64101148 MsG0780039439.01.T01:CDS
TCAGTGACATACCCCATAGG+AGG 0.646596 7:-64098290 None:intergenic
AATTCAGTGACATACCCCAT+AGG 0.669127 7:-64098293 None:intergenic
TTGGTAAAACTCCTCCTATG+GGG 0.687837 7:+64098279 MsG0780039439.01.T01:CDS
GATATGCATCCAGCTAAATG+GGG 0.703250 7:+64100180 MsG0780039439.01.T01:CDS
GTGAAGTGGAGTACACAATG+AGG 0.717847 7:+64098123 MsG0780039439.01.T01:exon
TCAAGCAAGAGACCTTTGGG+AGG 0.722019 7:+64101555 MsG0780039439.01.T01:CDS
TTTGACTACCTACCTCACAG+TGG 0.727048 7:-64099735 None:intergenic
ATGAATCAAAGCCCACTGTG+AGG 0.728024 7:+64099723 MsG0780039439.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAATTGAAAAAATTC+TGG + Chr7:64096794-64096813 MsG0780039439.01.T01:intron 10.0%
!! AAAAAAAGATTAAAAAATTC+TGG + Chr7:64096845-64096864 MsG0780039439.01.T01:intron 10.0%
!! GAAAAATAAATAAATACAAA+GGG - Chr7:64099166-64099185 None:intergenic 10.0%
!! TAATAAAAATGAAAAAAATC+TGG - Chr7:64097707-64097726 None:intergenic 10.0%
!! TGAAAAATAAATAAATACAA+AGG - Chr7:64099167-64099186 None:intergenic 10.0%
!! TTTAATGAATTCAAAATAAA+AGG + Chr7:64101298-64101317 MsG0780039439.01.T01:intron 10.0%
!!! AAATTAATTTTAAATGATCT+CGG + Chr7:64100808-64100827 MsG0780039439.01.T01:intron 10.0%
!!! ATATATACTAATCAAAATTT+TGG - Chr7:64097132-64097151 None:intergenic 10.0%
!!! TCATTTTTTCAAATTATTAT+TGG + Chr7:64100055-64100074 MsG0780039439.01.T01:intron 10.0%
!!! TTCTAAAAAAATTAAAATTC+TGG - Chr7:64097532-64097551 None:intergenic 10.0%
!!! TTTAAATTTTAATGAAATTC+TGG - Chr7:64097489-64097508 None:intergenic 10.0%
!! AGGAAAAAATTAAAAAAATC+TGG + Chr7:64096890-64096909 MsG0780039439.01.T01:intron 15.0%
!! CTGAAAAAATTTAAAAATTC+TGG + Chr7:64096938-64096957 MsG0780039439.01.T01:intron 15.0%
!! GAAAAATAATGAAAAAATTC+TGG + Chr7:64097033-64097052 MsG0780039439.01.T01:intron 15.0%
!!! ATAACATTTTTTTGTTATAC+AGG + Chr7:64098471-64098490 MsG0780039439.01.T01:intron 15.0%
!!! ATTTTCATTAGTATTTTTTC+TGG - Chr7:64097246-64097265 None:intergenic 15.0%
!!! ATTTTTATGTTAACTGTTTA+CGG - Chr7:64097916-64097935 None:intergenic 15.0%
!!! ATTTTTGTGTATTTATAAAC+CGG - Chr7:64097221-64097240 None:intergenic 15.0%
!!! CTGAAATTTTTTTAAAAATC+TGG - Chr7:64097662-64097681 None:intergenic 15.0%
!!! TCAATTTTTTTACTTTGTAA+GGG + Chr7:64098822-64098841 MsG0780039439.01.T01:intron 15.0%
!!! TTCAATTTTTTTACTTTGTA+AGG + Chr7:64098821-64098840 MsG0780039439.01.T01:intron 15.0%
!!! TTTTAATTTTTCAAGTTCAT+GGG + Chr7:64097844-64097863 MsG0780039439.01.T01:intron 15.0%
!!! TTTTCATTAGTATTTTTTCT+GGG - Chr7:64097245-64097264 None:intergenic 15.0%
!!! TTTTTAATTTTTCAAGTTCA+GGG - Chr7:64097862-64097843 None:intergenic 15.0%
!!! TTTTTAATTTTTCAAGTTCA+TGG + Chr7:64097843-64097862 MsG0780039439.01.T01:intron 15.0%
!!! TTTTTTAATTTTTCAAGTTC+AGG - Chr7:64097861-64097842 None:intergenic 15.0%
!! ACAGTTAACATAAAAATTGA+CGG + Chr7:64097919-64097938 MsG0780039439.01.T01:intron 20.0%
!! CGAAAATAAAAATGAAATTC+TGG - Chr7:64097436-64097455 None:intergenic 20.0%
!! GTTAATTACTTGTATAGAAT+TGG + Chr7:64101212-64101231 MsG0780039439.01.T01:intron 20.0%
!! TAGATATTAATAGGTAAGTT+TGG - Chr7:64099635-64099654 None:intergenic 20.0%
!! TAGTAATACTTTAATTAGCA+AGG + Chr7:64098354-64098373 MsG0780039439.01.T01:intron 20.0%
!! TATAAATACACAAAAATTCC+CGG + Chr7:64097224-64097243 MsG0780039439.01.T01:intron 20.0%
!! TATTTATAAACCGAGAATAA+GGG - Chr7:64097186-64097205 None:intergenic 20.0%
!! TTGGCTATAAATAAAGATAA+GGG + Chr7:64098061-64098080 MsG0780039439.01.T01:intron 20.0%
!! TTGGTTACATAGATATTAAT+AGG - Chr7:64099644-64099663 None:intergenic 20.0%
!! TTTGGCTATAAATAAAGATA+AGG + Chr7:64098060-64098079 MsG0780039439.01.T01:intron 20.0%
!!! AAACATGATTTTGAAAAACA+TGG + Chr7:64099828-64099847 MsG0780039439.01.T01:intron 20.0%
!!! AGTATTTCTCAAAAATTTTC+CGG - Chr7:64097364-64097383 None:intergenic 20.0%
!!! ATTAACGTTATGCAATTTTA+GGG - Chr7:64096666-64096685 None:intergenic 20.0%
!!! ATTTTTCTGTTAACTGTTTA+CGG + Chr7:64096705-64096724 MsG0780039439.01.T01:intron 20.0%
!!! TCTATTTTTTTGGAGTAAAT+AGG + Chr7:64096575-64096594 MsG0780039439.01.T01:intron 20.0%
!!! TTTGCTGATTCAAAAAAAAT+AGG - Chr7:64099350-64099369 None:intergenic 20.0%
!!! TTTTAATTTTTCAAGTTCAG+GGG - Chr7:64096778-64096797 None:intergenic 20.0%
!!! TTTTTGTGTATTTATAAACC+GGG - Chr7:64097194-64097213 None:intergenic 20.0%
! AAAAAATCAACATTTCCTTC+TGG + Chr7:64099054-64099073 MsG0780039439.01.T01:CDS 25.0%
! AAACATAGTGCCAAATTATT+AGG - Chr7:64101375-64101394 None:intergenic 25.0%
! AATCCAACAAAATTAAGAGA+AGG - Chr7:64098319-64098338 None:intergenic 25.0%
! AATGATTGTGCCTAATAATT+TGG + Chr7:64101362-64101381 MsG0780039439.01.T01:intron 25.0%
! AATTGATGTTTCGTTAACTA+CGG - Chr7:64096639-64096658 None:intergenic 25.0%
! ACAGTTAACAGAAAAATTGA+CGG - Chr7:64096702-64096721 None:intergenic 25.0%
! ACATAAGTGTAAAATTTCAG+GGG + Chr7:64097875-64097894 MsG0780039439.01.T01:intron 25.0%
! ACATAAGTGTAAAATTTCAG+GGG - Chr7:64097894-64097875 None:intergenic 25.0%
! AGATTAATGTAACAGCTAAT+TGG + Chr7:64101500-64101519 MsG0780039439.01.T01:CDS 25.0%
! AGCCAAAAAAATGAGTAAAT+AGG - Chr7:64098047-64098066 None:intergenic 25.0%
! ATAAATACACAAAAAGTTCC+CGG + Chr7:64097199-64097218 MsG0780039439.01.T01:intron 25.0%
! ATAAATGTCAACTTGTACAT+TGG + Chr7:64101929-64101948 MsG0780039439.01.T01:three_prime_UTR 25.0%
! ATACATAAAAAACCTAAGCT+CGG + Chr7:64097282-64097301 MsG0780039439.01.T01:intron 25.0%
! ATTAACGTTATGCAATTTCA+GGG + Chr7:64097955-64097974 MsG0780039439.01.T01:intron 25.0%
! ATTGTTTGATCTCAAATCAA+TGG - Chr7:64100776-64100795 None:intergenic 25.0%
! CACATAAGTGTAAAATTTCA+GGG + Chr7:64097874-64097893 MsG0780039439.01.T01:intron 25.0%
! CACATAAGTGTAAAATTTCA+GGG - Chr7:64097893-64097874 None:intergenic 25.0%
! GATTAATGTAACAGCTAATT+GGG + Chr7:64101501-64101520 MsG0780039439.01.T01:CDS 25.0%
! GTATTTATAAACCGAGAATA+AGG - Chr7:64097187-64097206 None:intergenic 25.0%
! TAATCAAGCAAAATAAGCAT+TGG - Chr7:64099663-64099682 None:intergenic 25.0%
! TACATGCTTTCACATAAATA+AGG - Chr7:64100689-64100708 None:intergenic 25.0%
! TATAAGATGCAGTTCTATTA+GGG - Chr7:64099801-64099820 None:intergenic 25.0%
! TATGTTTAATTGCACTTTGT+TGG + Chr7:64101669-64101688 MsG0780039439.01.T01:intron 25.0%
! TCTAAAGATTTATGATACTG+AGG + Chr7:64098443-64098462 MsG0780039439.01.T01:intron 25.0%
! TGATATTTCGTTAACTACAT+GGG + Chr7:64097985-64098004 MsG0780039439.01.T01:intron 25.0%
! TTAACATAAAAATTGACGGA+GGG + Chr7:64097923-64097942 MsG0780039439.01.T01:intron 25.0%
! TTATAAGATGCAGTTCTATT+AGG - Chr7:64099802-64099821 None:intergenic 25.0%
! TTCACATAAATAAGGATGTT+TGG - Chr7:64100681-64100700 None:intergenic 25.0%
! TTGATATTTCGTTAACTACA+TGG + Chr7:64097984-64098003 MsG0780039439.01.T01:intron 25.0%
! TTTATGCAGTATGATTTCAA+GGG + Chr7:64100390-64100409 MsG0780039439.01.T01:intron 25.0%
!! AAACTTTCTTTGTTTGTTAG+GGG + Chr7:64100156-64100175 MsG0780039439.01.T01:intron 25.0%
!! ATTCCTTCTCTTAATTTTGT+TGG + Chr7:64098313-64098332 MsG0780039439.01.T01:intron 25.0%
!! ATTTTATTAGCTAGTAGCTA+AGG - Chr7:64100362-64100381 None:intergenic 25.0%
!! CAAACTTTCTTTGTTTGTTA+GGG + Chr7:64100155-64100174 MsG0780039439.01.T01:intron 25.0%
!! CCAAATACTGTTATGTTTTA+GGG + Chr7:64099018-64099037 MsG0780039439.01.T01:intron 25.0%
!! GATTAACGTTATGCAATTTT+AGG - Chr7:64096667-64096686 None:intergenic 25.0%
!! GTATTTCTCAAAAATTTTCC+GGG - Chr7:64097363-64097382 None:intergenic 25.0%
!! TCAAACTTTCTTTGTTTGTT+AGG + Chr7:64100154-64100173 MsG0780039439.01.T01:intron 25.0%
!! TCCAAATACTGTTATGTTTT+AGG + Chr7:64099017-64099036 MsG0780039439.01.T01:intron 25.0%
!! TGTTTAACAACTTTTTGTGA+AGG + Chr7:64100478-64100497 MsG0780039439.01.T01:intron 25.0%
!! TTAACGTTATGCAATTTTAG+GGG - Chr7:64096665-64096684 None:intergenic 25.0%
!! TTCTTATATGCATGTTTTGT+TGG + Chr7:64101409-64101428 MsG0780039439.01.T01:intron 25.0%
!! TTTTATGCAGTATGATTTCA+AGG + Chr7:64100389-64100408 MsG0780039439.01.T01:intron 25.0%
!!! ACATTTTGTGAATAAGTTGA+GGG + Chr7:64101760-64101779 MsG0780039439.01.T01:CDS 25.0%
!!! ACATTTTTTTGTTATACAGG+TGG + Chr7:64098474-64098493 MsG0780039439.01.T01:intron 25.0%
!!! ACTAGTCTTGTCTATTTTTT+TGG + Chr7:64096565-64096584 MsG0780039439.01.T01:five_prime_UTR 25.0%
!!! ATGTTTTGTTGGATAGATAT+GGG + Chr7:64101420-64101439 MsG0780039439.01.T01:intron 25.0%
!!! ATTGGATATCGTTTTTACAT+TGG - Chr7:64099544-64099563 None:intergenic 25.0%
!!! CATATTTTTTCCCTTATTCT+CGG + Chr7:64097317-64097336 MsG0780039439.01.T01:intron 25.0%
!!! GTTTTTAGGGTGTTTATTTT+CGG - Chr7:64099464-64099483 None:intergenic 25.0%
!!! TAATAGGTAAGTTTGGTTTT+AGG - Chr7:64099628-64099647 None:intergenic 25.0%
!!! TGCCTATTTACTCATTTTTT+TGG + Chr7:64098042-64098061 MsG0780039439.01.T01:intron 25.0%
!!! TGTATTTTTTCCCTTATTCT+CGG + Chr7:64097173-64097192 MsG0780039439.01.T01:intron 25.0%
!!! TTTAATTTTTCAAGTTCAGG+GGG - Chr7:64096777-64096796 None:intergenic 25.0%
!!! TTTTTAGGGTGTTTATTTTC+GGG - Chr7:64099463-64099482 None:intergenic 25.0%
AAATGAAGCACAGTACAATA+CGG - Chr7:64100891-64100910 None:intergenic 30.0%
ACATAACTGATAATTGGGAA+AGG + Chr7:64100238-64100257 MsG0780039439.01.T01:CDS 30.0%
ACATGTAAAATACCTGTGAA+AGG - Chr7:64099217-64099236 None:intergenic 30.0%
ACGAAATCGTATGTTGTATT+CGG - Chr7:64101185-64101204 None:intergenic 30.0%
ATAAGTGTAAAATTTCAGGG+GGG + Chr7:64097877-64097896 MsG0780039439.01.T01:intron 30.0%
ATAAGTGTAAAATTTCAGGG+GGG - Chr7:64097896-64097877 None:intergenic 30.0%
ATGAGAAAATACCAGTTTCT+CGG - Chr7:64098544-64098563 None:intergenic 30.0%
ATGTCGAAATTTCGAAATTC+TGG + Chr7:64097084-64097103 MsG0780039439.01.T01:intron 30.0%
ATTGATGTTTCGTTAACTAC+GGG - Chr7:64096638-64096657 None:intergenic 30.0%
ATTGGTGCATATGTTAGTAT+CGG + Chr7:64100073-64100092 MsG0780039439.01.T01:intron 30.0%
CAAAGAAAGTTTGATTAGAG+AGG - Chr7:64100148-64100167 None:intergenic 30.0%
CATAAGTGTAAAATTTCAGG+GGG + Chr7:64097876-64097895 MsG0780039439.01.T01:intron 30.0%
CATAAGTGTAAAATTTCAGG+GGG - Chr7:64097895-64097876 None:intergenic 30.0%
CCCTAAAACATAACAGTATT+TGG - Chr7:64099021-64099040 None:intergenic 30.0%
CTTATTATCGCGATTAAGTT+CGG - Chr7:64098913-64098932 None:intergenic 30.0%
GAAGTTATTACAGTTAACCA+AGG + Chr7:64101012-64101031 MsG0780039439.01.T01:CDS 30.0%
GATATTTCGTTAACTACATG+GGG + Chr7:64097986-64098005 MsG0780039439.01.T01:intron 30.0%
GATTAACGTTATGCAATTTC+AGG + Chr7:64097954-64097973 MsG0780039439.01.T01:intron 30.0%
GCACATAAGTGTAAAATTTC+AGG + Chr7:64097873-64097892 MsG0780039439.01.T01:intron 30.0%
GCACATAAGTGTAAAATTTC+AGG - Chr7:64097892-64097873 None:intergenic 30.0%
GTTAACATAAAAATTGACGG+AGG + Chr7:64097922-64097941 MsG0780039439.01.T01:intron 30.0%
GTTTGTATTCTCAATTTCAC+CGG - Chr7:64099414-64099433 None:intergenic 30.0%
TAAAGTAAAGTGAAGTGAAG+TGG + Chr7:64098109-64098128 MsG0780039439.01.T01:five_prime_UTR 30.0%
TAACATAAAAATTGACGGAG+GGG + Chr7:64097924-64097943 MsG0780039439.01.T01:intron 30.0%
TAGAACACAGTTACATAGAT+TGG + Chr7:64101848-64101867 MsG0780039439.01.T01:three_prime_UTR 30.0%
TGGTGACATAACTGATAATT+GGG + Chr7:64100233-64100252 MsG0780039439.01.T01:CDS 30.0%
TGTATTTATAAACCGAGCTT+AGG - Chr7:64097297-64097316 None:intergenic 30.0%
TTAACAGAAAAATTGACGGA+GGG - Chr7:64096698-64096717 None:intergenic 30.0%
TTAACGTTATGCAATTTCAG+GGG + Chr7:64097956-64097975 MsG0780039439.01.T01:intron 30.0%
TTAGTATATATGTCGAGCTT+AGG + Chr7:64097141-64097160 MsG0780039439.01.T01:intron 30.0%
TTATGTACCTATGTTGACAT+AGG - Chr7:64098764-64098783 None:intergenic 30.0%
TTGGAATTTATTCAGATGCA+GGG + Chr7:64099121-64099140 MsG0780039439.01.T01:CDS 30.0%
TTTGACAAACCTTGCAATTT+CGG + Chr7:64098011-64098030 MsG0780039439.01.T01:intron 30.0%
TTTGACAAACCTTGCAATTT+CGG - Chr7:64098030-64098011 None:intergenic 30.0%
! AAAAACCATGCACTCAATTT+TGG + Chr7:64100262-64100281 MsG0780039439.01.T01:intron 30.0%
! ATGTGAAAGCATGTATTGTA+CGG + Chr7:64100694-64100713 MsG0780039439.01.T01:intron 30.0%
! CACATTTTGTGAATAAGTTG+AGG + Chr7:64101759-64101778 MsG0780039439.01.T01:CDS 30.0%
! TAACGTTATGCAATTTTAGG+GGG - Chr7:64096664-64096683 None:intergenic 30.0%
!! CATGTTTTGTTGGATAGATA+TGG + Chr7:64101419-64101438 MsG0780039439.01.T01:intron 30.0%
!! TAGAGAGGAGTACTTAAAAT+TGG - Chr7:64100133-64100152 None:intergenic 30.0%
!! TTGGAAGCATTGTTGATAAT+TGG + Chr7:64101876-64101895 MsG0780039439.01.T01:three_prime_UTR 30.0%
!!! GCTTATTTTGCTTGATTACA+GGG + Chr7:64099665-64099684 MsG0780039439.01.T01:intron 30.0%
!!! GGTTTTAGGAGTTTGTATTA+GGG - Chr7:64099614-64099633 None:intergenic 30.0%
!!! GTTTTAGGAGTTTGTATTAG+GGG - Chr7:64099613-64099632 None:intergenic 30.0%
!!! TATTAGGGGTGTTTTTTACT+TGG - Chr7:64099599-64099618 None:intergenic 30.0%
!!! TGCTTATTTTGCTTGATTAC+AGG + Chr7:64099664-64099683 MsG0780039439.01.T01:intron 30.0%
!!! TGGTTTTAGGAGTTTGTATT+AGG - Chr7:64099615-64099634 None:intergenic 30.0%
!!! TGTTATGTTTTAGGGTAATC+TGG + Chr7:64099026-64099045 MsG0780039439.01.T01:intron 30.0%
AAACCAACCAAACATGCAAA+AGG - Chr7:64098187-64098206 None:intergenic 35.0%
AAATGTGACTAAAGAGACCT+TGG + Chr7:64100972-64100991 MsG0780039439.01.T01:CDS 35.0%
AACATAAAAATTGACGGAGG+GGG + Chr7:64097925-64097944 MsG0780039439.01.T01:intron 35.0%
AACCAACCAAACATGCAAAA+GGG - Chr7:64098186-64098205 None:intergenic 35.0%
AATTGGATGCTATAAAGCAC+CGG - Chr7:64100116-64100135 None:intergenic 35.0%
AGAAGAAACCTTCTTGCTAA+TGG + Chr7:64098254-64098273 MsG0780039439.01.T01:CDS 35.0%
AGATAGACCAGTTGAAACAA+GGG - Chr7:64098728-64098747 None:intergenic 35.0%
AGATATGCATCCAGCTAAAT+GGG + Chr7:64100179-64100198 MsG0780039439.01.T01:CDS 35.0%
ATAGGTATCCTGTTATGACT+CGG + Chr7:64099862-64099881 MsG0780039439.01.T01:intron 35.0%
ATATCGTTCACTTCAGTTTG+TGG + Chr7:64100623-64100642 MsG0780039439.01.T01:CDS 35.0%
ATCTACGTAGCACATATTGA+AGG + Chr7:64099968-64099987 MsG0780039439.01.T01:intron 35.0%
ATTTGTAGAGCAGTGAATTC+AGG - Chr7:64100721-64100740 None:intergenic 35.0%
CGAACTTAATCGCGATAATA+AGG + Chr7:64098911-64098930 MsG0780039439.01.T01:CDS 35.0%
CTGGTGACATAACTGATAAT+TGG + Chr7:64100232-64100251 MsG0780039439.01.T01:CDS 35.0%
CTTATTAGAGACTATCTCCA+AGG - Chr7:64100992-64101011 None:intergenic 35.0%
CTTGGAATTTATTCAGATGC+AGG + Chr7:64099120-64099139 MsG0780039439.01.T01:CDS 35.0%
CTTGGAGATAGTCTCTAATA+AGG + Chr7:64100990-64101009 MsG0780039439.01.T01:CDS 35.0%
GAAAAAATGATCCGAGAAAC+TGG + Chr7:64098530-64098549 MsG0780039439.01.T01:CDS 35.0%
GCAGATTATGTTCATAGCAA+GGG + Chr7:64099090-64099109 MsG0780039439.01.T01:CDS 35.0%
GCTGTTACATTAATCTTCTG+AGG - Chr7:64101496-64101515 None:intergenic 35.0%
GTTAACAGAAAAATTGACGG+AGG - Chr7:64096699-64096718 None:intergenic 35.0%
TAACAGAAAAATTGACGGAG+GGG - Chr7:64096697-64096716 None:intergenic 35.0%
TAACGTTATGCAATTTCAGG+GGG + Chr7:64097957-64097976 MsG0780039439.01.T01:intron 35.0%
TACAATGAATTACCTCCCAA+AGG - Chr7:64101570-64101589 None:intergenic 35.0%
TACTGCTGAGGTTATAAGTA+AGG + Chr7:64101693-64101712 MsG0780039439.01.T01:intron 35.0%
TAGATAGACCAGTTGAAACA+AGG - Chr7:64098729-64098748 None:intergenic 35.0%
TATCGTTCACTTCAGTTTGT+GGG + Chr7:64100624-64100643 MsG0780039439.01.T01:CDS 35.0%
TCACATAGCGAAAAGAAGAT+TGG - Chr7:64099909-64099928 None:intergenic 35.0%
TCATTAGGGAACAACTATGA+TGG + Chr7:64098221-64098240 MsG0780039439.01.T01:CDS 35.0%
TCTGCAGCAACAAAAAATTG+TGG - Chr7:64098879-64098898 None:intergenic 35.0%
TGACAAATTATGTGTCACCT+TGG - Chr7:64101032-64101051 None:intergenic 35.0%
TGCAGATTATGTTCATAGCA+AGG + Chr7:64099089-64099108 MsG0780039439.01.T01:CDS 35.0%
TGTTATACAGGTGGAATAGT+TGG + Chr7:64098483-64098502 MsG0780039439.01.T01:intron 35.0%
TTCAGTTGAAATGAGAGAGA+GGG - Chr7:64098088-64098107 None:intergenic 35.0%
TTGACAAACCTTGCAATTTC+GGG - Chr7:64098031-64098012 None:intergenic 35.0%
TTGATGTTTCGTTAACTACG+GGG - Chr7:64096637-64096656 None:intergenic 35.0%
! ATGCCAAAACTTTTGCATCA+TGG + Chr7:64099277-64099296 MsG0780039439.01.T01:CDS 35.0%
! ATTCTAAAAGCACACTGTCT+CGG - Chr7:64101345-64101364 None:intergenic 35.0%
! CTTGCTTGAACAACAGTTTT+TGG - Chr7:64101544-64101563 None:intergenic 35.0%
! GTTACATAGATTGGAGCTTT+TGG + Chr7:64101857-64101876 MsG0780039439.01.T01:three_prime_UTR 35.0%
! TACCCATGATGCAAAAGTTT+TGG - Chr7:64099283-64099302 None:intergenic 35.0%
! TCTTCTTTTCGCTATGTGAA+TGG + Chr7:64099910-64099929 MsG0780039439.01.T01:CDS 35.0%
! TGCCAAAACTTTTGCATCAT+GGG + Chr7:64099278-64099297 MsG0780039439.01.T01:CDS 35.0%
! TTGTCATTGGAGGGTTTTTA+GGG - Chr7:64099477-64099496 None:intergenic 35.0%
!! AACGTTATGCAATTTTAGGG+GGG - Chr7:64096663-64096682 None:intergenic 35.0%
!! ATGCAAAAGTTTTGGCATCT+TGG - Chr7:64099275-64099294 None:intergenic 35.0%
!! GCTGTTGTGTTGCTTAATAA+AGG + Chr7:64101469-64101488 MsG0780039439.01.T01:CDS 35.0%
!! TACTGTGCTTCATTTTTCAC+TGG + Chr7:64100896-64100915 MsG0780039439.01.T01:intron 35.0%
!! TGTTTTAGGTGGATTTTGGA+GGG - Chr7:64099502-64099521 None:intergenic 35.0%
!!! ATGTTTTAGGGTAATCTGGT+GGG + Chr7:64099030-64099049 MsG0780039439.01.T01:intron 35.0%
!!! GTGTTTTTTACTTGGAGGTT+TGG - Chr7:64099591-64099610 None:intergenic 35.0%
!!! TATGTTTTAGGGTAATCTGG+TGG + Chr7:64099029-64099048 MsG0780039439.01.T01:intron 35.0%
!!! TCTTTTAGAACTCATGCTAC+TGG - Chr7:64101827-64101846 None:intergenic 35.0%
!!! TTCATTTTTCACTGGTTCAC+CGG + Chr7:64100904-64100923 MsG0780039439.01.T01:intron 35.0%
!!! TTTTTTACTTGGAGGTTTGG+AGG - Chr7:64099588-64099607 None:intergenic 35.0%
AAACAAAATGCGCCGTACAT+AGG + Chr7:64099430-64099449 MsG0780039439.01.T01:intron 40.0%
AAACAAATGCCTGGTTCACT+AGG + Chr7:64099240-64099259 MsG0780039439.01.T01:CDS 40.0%
AACAGATCCTGATATGCTTG+AGG + Chr7:64100570-64100589 MsG0780039439.01.T01:CDS 40.0%
AACATGGCCTTCTTATGCAT+AGG + Chr7:64099844-64099863 MsG0780039439.01.T01:intron 40.0%
AACGTTATGCAATTTCAGGG+GGG + Chr7:64097958-64097977 MsG0780039439.01.T01:intron 40.0%
AATTCAGTGACATACCCCAT+AGG - Chr7:64098296-64098315 None:intergenic 40.0%
AATTTCCCTCCGAAATTGCA+AGG - Chr7:64098023-64098042 None:intergenic 40.0%
ACAAACCTTGCAATTTCGGA+GGG + Chr7:64098015-64098034 MsG0780039439.01.T01:intron 40.0%
ACAGCTAATTGGGATGACAT+TGG + Chr7:64101511-64101530 MsG0780039439.01.T01:CDS 40.0%
ACATGTAGCAAACAAATGCC+TGG + Chr7:64099231-64099250 MsG0780039439.01.T01:CDS 40.0%
ACCAACCAAAATTGAGTGCA+TGG - Chr7:64100270-64100289 None:intergenic 40.0%
AGCTAGTAGCTAAGGATAGT+AGG - Chr7:64100354-64100373 None:intergenic 40.0%
AGGTCCTCTTTCAGGATATA+GGG + Chr7:64101444-64101463 MsG0780039439.01.T01:CDS 40.0%
ATGAGGAGTAGGATTGGATT+TGG + Chr7:64098140-64098159 MsG0780039439.01.T01:CDS 40.0%
ATTAAAGCCCGAGTCATAAC+AGG - Chr7:64099873-64099892 None:intergenic 40.0%
CAGGATACCTATGCATAAGA+AGG - Chr7:64099854-64099873 None:intergenic 40.0%
CTTACACGCATGTGATTCTA+CGG - Chr7:64101789-64101808 None:intergenic 40.0%
CTTCAGTTGAAATGAGAGAG+AGG - Chr7:64098089-64098108 None:intergenic 40.0%
CTTGGTAAAACTCCTCCTAT+GGG + Chr7:64098278-64098297 MsG0780039439.01.T01:CDS 40.0%
GAGATATGCATCCAGCTAAA+TGG + Chr7:64100178-64100197 MsG0780039439.01.T01:CDS 40.0%
GATATGCATCCAGCTAAATG+GGG + Chr7:64100180-64100199 MsG0780039439.01.T01:CDS 40.0%
GATATGCTTGAGGTTGGAAA+TGG + Chr7:64100580-64100599 MsG0780039439.01.T01:CDS 40.0%
GGAAATAGTTGGAGAACTAC+TGG + Chr7:64100213-64100232 MsG0780039439.01.T01:CDS 40.0%
GGATACACCTATGTCAACAT+AGG + Chr7:64098754-64098773 MsG0780039439.01.T01:CDS 40.0%
GGCGTACAATCTTAATCCAA+CGG + Chr7:64101319-64101338 MsG0780039439.01.T01:intron 40.0%
GTGCTAAAGTGGGAAATAGT+TGG + Chr7:64100202-64100221 MsG0780039439.01.T01:CDS 40.0%
TACACAATGAGGAGTAGGAT+TGG + Chr7:64098134-64098153 MsG0780039439.01.T01:exon 40.0%
TAGGTATCCTGTTATGACTC+GGG + Chr7:64099863-64099882 MsG0780039439.01.T01:intron 40.0%
TATCACACGATAGATTCGCT+TGG + Chr7:64101107-64101126 MsG0780039439.01.T01:intron 40.0%
TCTTTGTTCTGACCTTTCAC+AGG + Chr7:64099202-64099221 MsG0780039439.01.T01:intron 40.0%
TGACAAACCTTGCAATTTCG+GGG - Chr7:64098032-64098013 None:intergenic 40.0%
TGAGGAGTAGGATTGGATTT+GGG + Chr7:64098141-64098160 MsG0780039439.01.T01:CDS 40.0%
TGATGTTTCGTTAACTACGG+GGG - Chr7:64096636-64096655 None:intergenic 40.0%
TGTTCAAGCAAGAGACCTTT+GGG + Chr7:64101552-64101571 MsG0780039439.01.T01:CDS 40.0%
TGTTGCTGCAGATGATTGTT+GGG + Chr7:64098887-64098906 MsG0780039439.01.T01:CDS 40.0%
TTGGTAAAACTCCTCCTATG+GGG + Chr7:64098279-64098298 MsG0780039439.01.T01:CDS 40.0%
TTGTTCAAGCAAGAGACCTT+TGG + Chr7:64101551-64101570 MsG0780039439.01.T01:CDS 40.0%
TTGTTGCTGCAGATGATTGT+TGG + Chr7:64098886-64098905 MsG0780039439.01.T01:CDS 40.0%
TTTCCAACCTCAAGCATATC+AGG - Chr7:64100580-64100599 None:intergenic 40.0%
TTTGTTGGATAGATATGGGC+AGG + Chr7:64101424-64101443 MsG0780039439.01.T01:intron 40.0%
! CAGTTTGTGGGCTATTTCAA+AGG + Chr7:64100636-64100655 MsG0780039439.01.T01:CDS 40.0%
! GCACATATTGAAGGTGTATC+CGG + Chr7:64099977-64099996 MsG0780039439.01.T01:intron 40.0%
! GTGTCACTGCTTCATCATTA+GGG + Chr7:64098207-64098226 MsG0780039439.01.T01:CDS 40.0%
! GTTGTCATTGGAGGGTTTTT+AGG - Chr7:64099478-64099497 None:intergenic 40.0%
! TACGAGCATTGCAATCATTG+CGG + Chr7:64102008-64102027 MsG0780039439.01.T01:three_prime_UTR 40.0%
! TATGACTCGGGCTTTAATGA+AGG + Chr7:64099875-64099894 MsG0780039439.01.T01:CDS 40.0%
! TCAACTGGTCTATCTAAGCT+TGG + Chr7:64098733-64098752 MsG0780039439.01.T01:CDS 40.0%
! TGTGTCACTGCTTCATCATT+AGG + Chr7:64098206-64098225 MsG0780039439.01.T01:CDS 40.0%
!! ACCATGCACTCAATTTTGGT+TGG + Chr7:64100266-64100285 MsG0780039439.01.T01:intron 40.0%
!! CTGTTTTAGGTGGATTTTGG+AGG - Chr7:64099503-64099522 None:intergenic 40.0%
!! GCTTGAACAACAGTTTTTGG+AGG - Chr7:64101541-64101560 None:intergenic 40.0%
!! GGTCTGTTTTAGGTGGATTT+TGG - Chr7:64099506-64099525 None:intergenic 40.0%
!!! ATTTTGGAGGGTGTTGTCAT+TGG - Chr7:64099490-64099509 None:intergenic 40.0%
!!! TAGGGGTGTTTTTTACTTGG+AGG - Chr7:64099596-64099615 None:intergenic 40.0%
AACCTTCTTGCTAATGGCCT+TGG + Chr7:64098260-64098279 MsG0780039439.01.T01:CDS 45.0%
AACTCATGACCTAGTGAACC+AGG - Chr7:64099252-64099271 None:intergenic 45.0%
ACAAGCTAAGAAGGTCAGGA+TGG + Chr7:64101133-64101152 MsG0780039439.01.T01:CDS 45.0%
ACTTTAGCACCCCATTTAGC+TGG - Chr7:64100192-64100211 None:intergenic 45.0%
AGATCACAGCCTAGAAGAAG+AGG - Chr7:64100949-64100968 None:intergenic 45.0%
AGCCTGCAATAAACCTTCAC+CGG - Chr7:64100926-64100945 None:intergenic 45.0%
ATGAATCAAAGCCCACTGTG+AGG + Chr7:64099723-64099742 MsG0780039439.01.T01:CDS 45.0%
ATGCTTGAGGTTGGAAATGG+AGG + Chr7:64100583-64100602 MsG0780039439.01.T01:CDS 45.0%
CAATTTCCCCCGAAATTGCA+AGG + Chr7:64096598-64096617 MsG0780039439.01.T01:intron 45.0%
CACTTTGTTGGATACTGCTG+AGG + Chr7:64101681-64101700 MsG0780039439.01.T01:intron 45.0%
CAGGTCCTCTTTCAGGATAT+AGG + Chr7:64101443-64101462 MsG0780039439.01.T01:CDS 45.0%
CATAGCAAGGGTCTTAAGCT+TGG + Chr7:64099102-64099121 MsG0780039439.01.T01:CDS 45.0%
CCTTGGTAAAACTCCTCCTA+TGG + Chr7:64098277-64098296 MsG0780039439.01.T01:CDS 45.0%
GACAAACCTTGCAATTTCGG+AGG + Chr7:64098014-64098033 MsG0780039439.01.T01:intron 45.0%
GACAAACCTTGCAATTTCGG+GGG - Chr7:64098033-64098014 None:intergenic 45.0%
GAGTAGGATTGGATTTGGGA+TGG + Chr7:64098145-64098164 MsG0780039439.01.T01:CDS 45.0%
GATCCTGATATGCTTGAGGT+TGG + Chr7:64100574-64100593 MsG0780039439.01.T01:CDS 45.0%
GCTACCCTATATCCTGAAAG+AGG - Chr7:64101451-64101470 None:intergenic 45.0%
GGATCTGATGACATATGTGC+CGG + Chr7:64100094-64100113 MsG0780039439.01.T01:intron 45.0%
GTGAAGTGGAGTACACAATG+AGG + Chr7:64098123-64098142 MsG0780039439.01.T01:exon 45.0%
TACCAAGGCCATTAGCAAGA+AGG - Chr7:64098265-64098284 None:intergenic 45.0%
TATCCGGTATCTGACATGTG+TGG + Chr7:64099993-64100012 MsG0780039439.01.T01:intron 45.0%
TGCTTGAGGTTGGAAATGGA+GGG + Chr7:64100584-64100603 MsG0780039439.01.T01:CDS 45.0%
TGGAGTACACAATGAGGAGT+AGG + Chr7:64098129-64098148 MsG0780039439.01.T01:exon 45.0%
TGTGACGCAGTTAGAGATCT+TGG - Chr7:64100856-64100875 None:intergenic 45.0%
TTCTAACCATTCCAACCACC+AGG - Chr7:64100451-64100470 None:intergenic 45.0%
TTGACTACCTACCTCACAGT+GGG - Chr7:64099737-64099756 None:intergenic 45.0%
TTTGACTACCTACCTCACAG+TGG - Chr7:64099738-64099757 None:intergenic 45.0%
! AGCTAAATGGGGTGCTAAAG+TGG + Chr7:64100191-64100210 MsG0780039439.01.T01:CDS 45.0%
! CCATAGGAGGAGTTTTACCA+AGG - Chr7:64098280-64098299 None:intergenic 45.0%
! GACCCTTTTGCATGTTTGGT+TGG + Chr7:64098181-64098200 MsG0780039439.01.T01:CDS 45.0%
! GCTAAATGGGGTGCTAAAGT+GGG + Chr7:64100192-64100211 MsG0780039439.01.T01:CDS 45.0%
! TAGGATTGGATTTGGGATGG+TGG + Chr7:64098148-64098167 MsG0780039439.01.T01:CDS 45.0%
! TGGTGACCCTTTTGCATGTT+TGG + Chr7:64098177-64098196 MsG0780039439.01.T01:CDS 45.0%
!! AAACAAGGGCATCAGCTGTA+AGG - Chr7:64098714-64098733 None:intergenic 45.0%
!! CTCGGTTGCTGATTTGCAAT+TGG + Chr7:64100826-64100845 MsG0780039439.01.T01:intron 45.0%
!!! ATTTGGGATGGTGGTGGTTT+TGG + Chr7:64098157-64098176 MsG0780039439.01.T01:CDS 45.0%
!! AAAAAAATATTAAAAAATTC+TGG - Chr7:64097743-64097762 None:intergenic 5.0%
!! AAAAATAAATAAAAAAATTC+TGG - Chr7:64097795-64097814 None:intergenic 5.0%
!! AATTGAAAAATTAATAAAAA+AGG + Chr7:64096870-64096889 MsG0780039439.01.T01:intron 5.0%
!! TAAAAAAGATTAAAAAATTA+TGG - Chr7:64097576-64097595 None:intergenic 5.0%
ATATGGGCAGGTCCTCTTTC+AGG + Chr7:64101436-64101455 MsG0780039439.01.T01:CDS 50.0%
ATCAAAGCCCACTGTGAGGT+AGG + Chr7:64099727-64099746 MsG0780039439.01.T01:intron 50.0%
CAAAATGCGCCGTACATAGG+CGG + Chr7:64099433-64099452 MsG0780039439.01.T01:intron 50.0%
CACCGGTGAAGGTTTATTGC+AGG + Chr7:64100921-64100940 MsG0780039439.01.T01:intron 50.0%
CAGCCACACATGTCAGATAC+CGG - Chr7:64099999-64100018 None:intergenic 50.0%
GCGTACAAGCTAAGAAGGTC+AGG + Chr7:64101129-64101148 MsG0780039439.01.T01:CDS 50.0%
GCTAAGAAGGTCAGGATGGA+AGG + Chr7:64101137-64101156 MsG0780039439.01.T01:CDS 50.0%
GCTTGGCGTACAAGCTAAGA+AGG + Chr7:64101124-64101143 MsG0780039439.01.T01:CDS 50.0%
GTCTCTGTTCGTCTTGAGCA+GGG - Chr7:64099392-64099411 None:intergenic 50.0%
TATGCTGAGCTTGCAAGACC+TGG + Chr7:64100430-64100449 MsG0780039439.01.T01:CDS 50.0%
TCAAGCAAGAGACCTTTGGG+AGG + Chr7:64101555-64101574 MsG0780039439.01.T01:CDS 50.0%
TCAGTGACATACCCCATAGG+AGG - Chr7:64098293-64098312 None:intergenic 50.0%
TGCTCAAGACGAACAGAGAC+CGG + Chr7:64099392-64099411 MsG0780039439.01.T01:intron 50.0%
TTGCAGGCTCCTCTTCTTCT+AGG + Chr7:64100937-64100956 MsG0780039439.01.T01:intron 50.0%
! ACATTGGTCGCTTTCGCGAA+GGG - Chr7:64099528-64099547 None:intergenic 50.0%
! ACTCGGGCTTTAATGAAGGC+AGG + Chr7:64099879-64099898 MsG0780039439.01.T01:CDS 50.0%
! GATTGGATTTGGGATGGTGG+TGG + Chr7:64098151-64098170 MsG0780039439.01.T01:CDS 50.0%
! GCAAGAGCTTTGATGCCAGA+AGG - Chr7:64099072-64099091 None:intergenic 50.0%
! GCTGATGCCCTTGTTTCAAC+TGG + Chr7:64098718-64098737 MsG0780039439.01.T01:intron 50.0%
! TACATTGGTCGCTTTCGCGA+AGG - Chr7:64099529-64099548 None:intergenic 50.0%
! TTCGCGAAGGGGTCTGTTTT+AGG - Chr7:64099516-64099535 None:intergenic 50.0%
!! TGGAGGGTGTTGTCATTGGA+GGG - Chr7:64099486-64099505 None:intergenic 50.0%
!! TTGGAGGGTGTTGTCATTGG+AGG - Chr7:64099487-64099506 None:intergenic 50.0%
!! TTTCACTGGTTCACCGGTGA+AGG + Chr7:64100910-64100929 MsG0780039439.01.T01:intron 50.0%
AGCTTGCAAGACCTGGTGGT+TGG + Chr7:64100437-64100456 MsG0780039439.01.T01:CDS 55.0%
CAGGATGGAAGGTGATGCTG+AGG + Chr7:64101148-64101167 MsG0780039439.01.T01:CDS 55.0%
GCAAGACCTGGTGGTTGGAA+TGG + Chr7:64100442-64100461 MsG0780039439.01.T01:CDS 55.0%
GGAGGTTTGGAGGTGAGTAG+TGG - Chr7:64099578-64099597 None:intergenic 55.0%
GGTCTCTGTTCGTCTTGAGC+AGG - Chr7:64099393-64099412 None:intergenic 55.0%
GTAGTGGCGATGGGTGGTAT+TGG - Chr7:64099562-64099581 None:intergenic 55.0%
GTTCGTCTTGAGCAGGGATC+TGG - Chr7:64099386-64099405 None:intergenic 55.0%
TCGGGAGTTCCGCCTATGTA+CGG - Chr7:64099445-64099464 None:intergenic 55.0%
TGGAGGTGAGTAGTGGCGAT+GGG - Chr7:64099571-64099590 None:intergenic 55.0%
TTGGAGGTGAGTAGTGGCGA+TGG - Chr7:64099572-64099591 None:intergenic 55.0%
! CATTGGTCGCTTTCGCGAAG+GGG - Chr7:64099527-64099546 None:intergenic 55.0%
!! GCGAAGGGGTCTGTTTTAGG+TGG - Chr7:64099513-64099532 None:intergenic 55.0%
AAGCACACTGTCTCGGCCGT+TGG - Chr7:64101338-64101357 None:intergenic 60.0%
AGGTGAGTAGTGGCGATGGG+TGG - Chr7:64099568-64099587 None:intergenic 60.0%
GCTGAGCTTGCAAGACCTGG+TGG + Chr7:64100433-64100452 MsG0780039439.01.T01:CDS 60.0%
Chromosome Type Strat End Strand Name
Chr7 gene 64096546 64102042 64096546 ID=MsG0780039439.01;Name=MsG0780039439.01
Chr7 mRNA 64096546 64102042 64096546 ID=MsG0780039439.01.T01;Parent=MsG0780039439.01;Name=MsG0780039439.01.T01;_AED=0.49;_eAED=0.51;_QI=117|0.86|0.87|1|0.93|0.87|16|207|432
Chr7 exon 64101743 64102042 64101743 ID=MsG0780039439.01.T01:exon:16636;Parent=MsG0780039439.01.T01
Chr7 exon 64101436 64101576 64101436 ID=MsG0780039439.01.T01:exon:16635;Parent=MsG0780039439.01.T01
Chr7 exon 64101120 64101169 64101120 ID=MsG0780039439.01.T01:exon:16634;Parent=MsG0780039439.01.T01
Chr7 exon 64100943 64101033 64100943 ID=MsG0780039439.01.T01:exon:16633;Parent=MsG0780039439.01.T01
Chr7 exon 64100542 64100657 64100542 ID=MsG0780039439.01.T01:exon:16632;Parent=MsG0780039439.01.T01
Chr7 exon 64100399 64100463 64100399 ID=MsG0780039439.01.T01:exon:16631;Parent=MsG0780039439.01.T01
Chr7 exon 64100176 64100259 64100176 ID=MsG0780039439.01.T01:exon:16630;Parent=MsG0780039439.01.T01
Chr7 exon 64099866 64099931 64099866 ID=MsG0780039439.01.T01:exon:16629;Parent=MsG0780039439.01.T01
Chr7 exon 64099686 64099744 64099686 ID=MsG0780039439.01.T01:exon:16628;Parent=MsG0780039439.01.T01
Chr7 exon 64099224 64099299 64099224 ID=MsG0780039439.01.T01:exon:16627;Parent=MsG0780039439.01.T01
Chr7 exon 64099039 64099142 64099039 ID=MsG0780039439.01.T01:exon:16626;Parent=MsG0780039439.01.T01
Chr7 exon 64098856 64098932 64098856 ID=MsG0780039439.01.T01:exon:16625;Parent=MsG0780039439.01.T01
Chr7 exon 64098719 64098775 64098719 ID=MsG0780039439.01.T01:exon:16624;Parent=MsG0780039439.01.T01
Chr7 exon 64098493 64098551 64098493 ID=MsG0780039439.01.T01:exon:16623;Parent=MsG0780039439.01.T01
Chr7 exon 64098064 64098300 64098064 ID=MsG0780039439.01.T01:exon:16622;Parent=MsG0780039439.01.T01
Chr7 exon 64096546 64096586 64096546 ID=MsG0780039439.01.T01:exon:16621;Parent=MsG0780039439.01.T01
Chr7 five_prime_UTR 64096546 64096586 64096546 ID=MsG0780039439.01.T01:five_prime_utr;Parent=MsG0780039439.01.T01
Chr7 five_prime_UTR 64098064 64098139 64098064 ID=MsG0780039439.01.T01:five_prime_utr;Parent=MsG0780039439.01.T01
Chr7 CDS 64098140 64098300 64098140 ID=MsG0780039439.01.T01:cds;Parent=MsG0780039439.01.T01
Chr7 CDS 64098493 64098551 64098493 ID=MsG0780039439.01.T01:cds;Parent=MsG0780039439.01.T01
Chr7 CDS 64098719 64098775 64098719 ID=MsG0780039439.01.T01:cds;Parent=MsG0780039439.01.T01
Chr7 CDS 64098856 64098932 64098856 ID=MsG0780039439.01.T01:cds;Parent=MsG0780039439.01.T01
Chr7 CDS 64099039 64099142 64099039 ID=MsG0780039439.01.T01:cds;Parent=MsG0780039439.01.T01
Chr7 CDS 64099224 64099299 64099224 ID=MsG0780039439.01.T01:cds;Parent=MsG0780039439.01.T01
Chr7 CDS 64099686 64099744 64099686 ID=MsG0780039439.01.T01:cds;Parent=MsG0780039439.01.T01
Chr7 CDS 64099866 64099931 64099866 ID=MsG0780039439.01.T01:cds;Parent=MsG0780039439.01.T01
Chr7 CDS 64100176 64100259 64100176 ID=MsG0780039439.01.T01:cds;Parent=MsG0780039439.01.T01
Chr7 CDS 64100399 64100463 64100399 ID=MsG0780039439.01.T01:cds;Parent=MsG0780039439.01.T01
Chr7 CDS 64100542 64100657 64100542 ID=MsG0780039439.01.T01:cds;Parent=MsG0780039439.01.T01
Chr7 CDS 64100943 64101033 64100943 ID=MsG0780039439.01.T01:cds;Parent=MsG0780039439.01.T01
Chr7 CDS 64101120 64101169 64101120 ID=MsG0780039439.01.T01:cds;Parent=MsG0780039439.01.T01
Chr7 CDS 64101436 64101576 64101436 ID=MsG0780039439.01.T01:cds;Parent=MsG0780039439.01.T01
Chr7 CDS 64101743 64101835 64101743 ID=MsG0780039439.01.T01:cds;Parent=MsG0780039439.01.T01
Chr7 three_prime_UTR 64101836 64102042 64101836 ID=MsG0780039439.01.T01:three_prime_utr;Parent=MsG0780039439.01.T01
Gene Sequence

>MsG0780039439.01.T01

ATGAGGAGTAGGATTGGATTTGGGATGGTGGTGGTTTTGGTGACCCTTTTGCATGTTTGGTTGGTTTGTGTCACTGCTTCATCATTAGGGAACAACTATGATGGAGAGCATCTCAGAAGAAACCTTCTTGCTAATGGCCTTGGTAAAACTCCTCCTATGGGGTGGAATAGTTGGAATCATTTCAGCTGTCAAATTAATGAAAAAATGATCCGAGAAACTGCTGATGCCCTTGTTTCAACTGGTCTATCTAAGCTTGGATACACCTATGTCAACATAGCACGTACAATTAATCTTTATCCACAATTTTTTGTTGCTGCAGATGATTGTTGGGCCGAACTTAATCGCGATAATAAGGGTAATCTGGTGGGAAAAAAATCAACATTTCCTTCTGGCATCAAAGCTCTTGCAGATTATGTTCATAGCAAGGGTCTTAAGCTTGGAATTTATTCAGATGCAGGGTATTTTACATGTAGCAAACAAATGCCTGGTTCACTAGGTCATGAGTTCCAAGATGCCAAAACTTTTGCATCATGGGGCATTGATTATTTGAAGTATGATAACTGTTACAATGATGAATCAAAGCCCACTGTGAGGTATCCTGTTATGACTCGGGCTTTAATGAAGGCAGGTCGTCCAATCTTCTTTTCGCTATGTGAATGGGGAGATATGCATCCAGCTAAATGGGGTGCTAAAGTGGGAAATAGTTGGAGAACTACTGGTGACATAACTGATAATTGGGAAAGTATGATTTCAAGGGCTGACATGAATGAAGTTTATGCTGAGCTTGCAAGACCTGGTGGTTGGAATGTCAAGATATTCATTAAGCATTCTAACTCAACAGATCCTGATATGCTTGAGGTTGGAAATGGAGGGATGACAAAAAATGAGTATATCGTTCACTTCAGTTTGTGGGCTATTTCAAAGGCTCCTCTTCTTCTAGGCTGTGATCTTAGAAATGTGACTAAAGAGACCTTGGAGATAGTCTCTAATAAGGAAGTTATTACAGTTAACCAAGATTCGCTTGGCGTACAAGCTAAGAAGGTCAGGATGGAAGGTGATGCTGAGATATGGGCAGGTCCTCTTTCAGGATATAGGGTAGCTGTTGTGTTGCTTAATAAAGGACCTCAGAAGATTAATGTAACAGCTAATTGGGATGACATTGGCATTCCTCCAAAAACTGTTGTTCAAGCAAGAGACCTTTGGGAGCACAAAACATTGAAGACACATTTTGTGAATAAGTTGAGGGCAACCGTAGAATCACATGCGTGTAAGATGTTTGTGTTGAAACCAGTAGCATGA

Protein sequence

>MsG0780039439.01.T01

MRSRIGFGMVVVLVTLLHVWLVCVTASSLGNNYDGEHLRRNLLANGLGKTPPMGWNSWNHFSCQINEKMIRETADALVSTGLSKLGYTYVNIARTINLYPQFFVAADDCWAELNRDNKGNLVGKKSTFPSGIKALADYVHSKGLKLGIYSDAGYFTCSKQMPGSLGHEFQDAKTFASWGIDYLKYDNCYNDESKPTVRYPVMTRALMKAGRPIFFSLCEWGDMHPAKWGAKVGNSWRTTGDITDNWESMISRADMNEVYAELARPGGWNVKIFIKHSNSTDPDMLEVGNGGMTKNEYIVHFSLWAISKAPLLLGCDLRNVTKETLEIVSNKEVITVNQDSLGVQAKKVRMEGDAEIWAGPLSGYRVAVVLLNKGPQKINVTANWDDIGIPPKTVVQARDLWEHKTLKTHFVNKLRATVESHACKMFVLKPVA*