AlfalfaGEDB | MsG0580027655.01

M. sativa cultivar ZhongmuNo.1 / MsG0580027655.01

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580027655.01.T01	XP_003615100.1	93.427	213	13	1	1	212	1	213	1.94E-135	388

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048065.01	MsG0580027655.01	0.807133	5.865983e-50	3.241332e-47
MsG0080048660.01	MsG0580027655.01	0.800759	1.239817e-48	5.819903e-46
MsG0080048773.01	MsG0580027655.01	0.848676	5.265846e-60	9.738829e-57
MsG0080048849.01	MsG0580027655.01	0.821990	3.008993e-53	2.486430e-50
MsG0080048878.01	MsG0580027655.01	0.825533	4.451835e-54	4.068708e-51
MsG0080049040.01	MsG0580027655.01	0.814763	1.305154e-51	8.834233e-49
MsG0080049068.01	MsG0580027655.01	0.816920	4.311808e-52	3.095862e-49
MsG0180000355.01	MsG0580027655.01	0.809769	1.606443e-50	9.515711e-48
MsG0180000404.01	MsG0580027655.01	0.820973	5.167424e-53	4.150361e-50
MsG0180000534.01	MsG0580027655.01	0.804064	2.584053e-49	1.319682e-46
MsG0180000670.01	MsG0580027655.01	0.802354	5.838148e-49	2.853828e-46
MsG0180000782.01	MsG0580027655.01	0.858984	5.657154e-63	1.470911e-59
MsG0180000784.01	MsG0580027655.01	0.843369	1.461470e-58	2.281808e-55
MsG0180000785.01	MsG0580027655.01	0.853163	2.864808e-61	6.132396e-58
MsG0180001085.01	MsG0580027655.01	0.813419	2.584911e-51	1.687189e-48
MsG0180001100.01	MsG0580027655.01	0.831373	1.732336e-55	1.876255e-52
MsG0180001105.01	MsG0580027655.01	0.803621	3.194996e-49	1.613115e-46
MsG0180001270.01	MsG0580027655.01	0.813384	2.630667e-51	1.715475e-48
MsG0180002278.01	MsG0580027655.01	0.834273	3.296425e-56	3.892856e-53
MsG0180002279.01	MsG0580027655.01	0.824724	6.912024e-54	6.173840e-51
MsG0180002399.01	MsG0580027655.01	0.820603	6.287355e-53	4.997214e-50
MsG0180002547.01	MsG0580027655.01	0.805643	1.208803e-49	6.429121e-47
MsG0180002700.01	MsG0580027655.01	0.801648	8.154002e-49	3.914621e-46
MsG0180002929.01	MsG0580027655.01	0.830173	3.409550e-55	3.564863e-52
MsG0180003353.01	MsG0580027655.01	0.845893	3.056065e-59	5.168936e-56
MsG0180003741.01	MsG0580027655.01	0.849397	3.319238e-60	6.284088e-57
MsG0180003821.01	MsG0580027655.01	0.848855	4.697257e-60	8.737942e-57
MsG0180003885.01	MsG0580027655.01	0.817871	2.633742e-52	1.940926e-49
MsG0180004046.01	MsG0580027655.01	0.831820	1.344207e-55	1.475480e-52
MsG0180004103.01	MsG0580027655.01	0.817198	3.734681e-52	2.701907e-49
MsG0180004192.01	MsG0580027655.01	0.803716	3.052675e-49	1.544987e-46
MsG0180004246.01	MsG0580027655.01	0.845276	4.493470e-59	7.449603e-56
MsG0180004466.01	MsG0580027655.01	0.804869	1.756381e-49	9.158067e-47
MsG0180004493.01	MsG0580027655.01	0.830409	2.984679e-55	3.141983e-52
MsG0180004497.01	MsG0580027655.01	0.818412	1.986919e-52	1.486352e-49
MsG0180004735.01	MsG0580027655.01	0.826533	2.574480e-54	2.420870e-51
MsG0180004814.01	MsG0580027655.01	0.811603	6.446212e-51	4.007451e-48
MsG0180005039.01	MsG0580027655.01	0.826196	3.096962e-54	2.884560e-51
MsG0180005113.01	MsG0580027655.01	0.823275	1.512423e-53	1.296245e-50
MsG0180005153.01	MsG0580027655.01	0.822556	2.223922e-53	1.867830e-50
MsG0180005169.01	MsG0580027655.01	0.800869	1.177181e-48	5.541693e-46
MsG0180005807.01	MsG0580027655.01	0.841114	5.782868e-58	8.410911e-55
MsG0180006017.01	MsG0580027655.01	0.826744	2.293095e-54	2.169270e-51
MsG0180006031.01	MsG0580027655.01	0.840797	7.003152e-58	1.008769e-54
MsG0180006096.01	MsG0580027655.01	0.821792	3.344126e-53	2.747980e-50
MsG0280006306.01	MsG0580027655.01	-0.818166	2.258270e-52	1.677745e-49
MsG0280006309.01	MsG0580027655.01	0.814324	1.632843e-51	1.092251e-48
MsG0280006360.01	MsG0580027655.01	0.800936	1.140566e-48	5.378506e-46
MsG0280010564.01	MsG0580027655.01	0.831988	1.221512e-55	1.347399e-52
MsG0280010569.01	MsG0580027655.01	0.857845	1.236291e-62	3.093411e-59
MsG0280010753.01	MsG0580027655.01	0.807901	4.030628e-50	2.272098e-47
MsG0280011255.01	MsG0580027655.01	0.817025	4.083352e-52	2.940396e-49
MsG0380011581.01	MsG0580027655.01	0.804219	2.399463e-49	1.230186e-46
MsG0380011669.01	MsG0580027655.01	0.800464	1.424032e-48	6.634770e-46
MsG0380012208.01	MsG0580027655.01	0.821251	4.458947e-53	3.608648e-50
MsG0380013145.01	MsG0580027655.01	0.808922	2.440398e-50	1.413161e-47
MsG0480018584.01	MsG0580027655.01	0.852594	4.165797e-61	8.747980e-58
MsG0480018850.01	MsG0580027655.01	0.830234	3.293620e-55	3.449913e-52
MsG0480018911.01	MsG0580027655.01	0.817910	2.580054e-52	1.903389e-49
MsG0480019007.01	MsG0580027655.01	0.804339	2.265497e-49	1.165111e-46
MsG0480019711.01	MsG0580027655.01	0.827347	1.644808e-54	1.583922e-51
MsG0480019971.01	MsG0580027655.01	0.809652	1.701850e-50	1.004957e-47
MsG0480020024.01	MsG0580027655.01	0.831320	1.784286e-55	1.929474e-52
MsG0480020315.01	MsG0580027655.01	0.822505	2.284950e-53	1.916227e-50
MsG0480020408.01	MsG0580027655.01	0.804242	2.372800e-49	1.217211e-46
MsG0480020690.01	MsG0580027655.01	0.840719	7.338326e-58	1.054486e-54
MsG0480020783.01	MsG0580027655.01	0.810134	1.340580e-50	8.016539e-48
MsG0480020889.01	MsG0580027655.01	0.855001	8.453344e-62	1.923459e-58
MsG0480020890.01	MsG0580027655.01	0.849035	4.185991e-60	7.833343e-57
MsG0480021060.01	MsG0580027655.01	0.808407	3.144293e-50	1.796423e-47
MsG0480021248.01	MsG0580027655.01	0.804308	2.299012e-49	1.181425e-46
MsG0480022355.01	MsG0580027655.01	0.846679	1.866612e-59	3.238319e-56
MsG0480022537.01	MsG0580027655.01	0.836007	1.203994e-56	1.497687e-53
MsG0480022624.01	MsG0580027655.01	0.828368	9.344417e-55	9.269066e-52
MsG0480022647.01	MsG0580027655.01	0.828310	9.653740e-55	9.559408e-52
MsG0480022711.01	MsG0580027655.01	0.800353	1.499999e-48	6.969461e-46
MsG0480023073.01	MsG0580027655.01	0.804856	1.767235e-49	9.211277e-47
MsG0480023381.01	MsG0580027655.01	0.807288	5.439334e-50	3.017876e-47
MsG0480023384.01	MsG0580027655.01	0.834625	2.690500e-56	3.210730e-53
MsG0480023385.01	MsG0580027655.01	0.818604	1.797331e-52	1.351494e-49
MsG0480023553.01	MsG0580027655.01	0.808629	2.819495e-50	1.620094e-47
MsG0480023739.01	MsG0580027655.01	0.801122	1.045089e-48	4.951501e-46
MsG0480023867.01	MsG0580027655.01	0.813033	3.141524e-51	2.029069e-48
MsG0480023877.01	MsG0580027655.01	0.801305	9.587366e-49	4.563248e-46
MsG0480023992.01	MsG0580027655.01	0.814073	1.854787e-51	1.232322e-48
MsG0480024030.01	MsG0580027655.01	0.812103	5.015907e-51	3.160503e-48
MsG0580024569.01	MsG0580027655.01	0.821416	4.084247e-53	3.320772e-50
MsG0580024619.01	MsG0580027655.01	0.802926	4.449865e-49	2.207019e-46
MsG0580024806.01	MsG0580027655.01	0.821867	3.213150e-53	2.646021e-50
MsG0580024873.01	MsG0580027655.01	0.800761	1.238470e-48	5.813887e-46
MsG0580024952.01	MsG0580027655.01	0.805954	1.040044e-49	5.575992e-47
MsG0580025053.01	MsG0580027655.01	0.813249	2.816076e-51	1.829483e-48
MsG0580025055.01	MsG0580027655.01	0.835458	1.658868e-56	2.029707e-53
MsG0580025231.01	MsG0580027655.01	0.800007	1.763539e-48	8.122128e-46
MsG0580025332.01	MsG0580027655.01	0.803382	3.580244e-49	1.796502e-46
MsG0580025366.01	MsG0580027655.01	0.802764	4.804911e-49	2.373431e-46
MsG0580025411.01	MsG0580027655.01	0.806601	7.597832e-50	4.141097e-47
MsG0580025607.01	MsG0580027655.01	0.824074	9.826480e-54	8.614221e-51
MsG0580025661.01	MsG0580027655.01	0.805427	1.341944e-49	7.097608e-47
MsG0580025668.01	MsG0580027655.01	0.825359	4.894292e-54	4.450917e-51
MsG0580025742.01	MsG0580027655.01	0.809381	1.946343e-50	1.141058e-47
MsG0580025828.01	MsG0580027655.01	0.824649	7.197699e-54	6.415057e-51
MsG0580025906.01	MsG0580027655.01	0.804958	1.682581e-49	8.793111e-47
MsG0580025971.01	MsG0580027655.01	0.800206	1.606700e-48	7.437316e-46
MsG0380014926.01	MsG0580027655.01	0.834677	2.610841e-56	3.120286e-53
MsG0380015438.01	MsG0580027655.01	0.808020	3.801652e-50	2.149905e-47
MsG0380015784.01	MsG0580027655.01	0.810216	1.286911e-50	7.711816e-48
MsG0380015847.01	MsG0580027655.01	-0.814748	1.315159e-51	8.898592e-49
MsG0380015885.01	MsG0580027655.01	0.818095	2.343302e-52	1.737445e-49
MsG0380015896.01	MsG0580027655.01	0.815755	7.858141e-52	5.465420e-49
MsG0380016192.01	MsG0580027655.01	0.814700	1.348385e-51	9.111624e-49
MsG0380016284.01	MsG0580027655.01	0.819854	9.333771e-53	7.266491e-50
MsG0380016469.01	MsG0580027655.01	0.801261	9.785971e-49	4.652669e-46
MsG0380016529.01	MsG0580027655.01	0.805255	1.457866e-49	7.676468e-47
MsG0380016540.01	MsG0580027655.01	0.803420	3.516810e-49	1.766452e-46
MsG0380016671.01	MsG0580027655.01	0.813333	2.698772e-51	1.757392e-48
MsG0380016864.01	MsG0580027655.01	0.848778	4.932686e-60	9.153300e-57
MsG0380017087.01	MsG0580027655.01	0.861314	1.119546e-63	3.154825e-60
MsG0380017202.01	MsG0580027655.01	0.818510	1.887963e-52	1.416029e-49
MsG0380017293.01	MsG0580027655.01	0.803639	3.166676e-49	1.599572e-46
MsG0380017338.01	MsG0580027655.01	0.824868	6.393171e-54	5.733768e-51
MsG0380017423.01	MsG0580027655.01	0.844736	6.283470e-59	1.024058e-55
MsG0380017931.01	MsG0580027655.01	0.835533	1.588061e-56	1.947417e-53
MsG0380018037.01	MsG0580027655.01	0.830062	3.627343e-55	3.780278e-52
MsG0380018069.01	MsG0580027655.01	0.814974	1.172179e-51	7.979753e-49
MsG0480018200.01	MsG0580027655.01	0.836080	1.153758e-56	1.438500e-53
MsG0480018218.01	MsG0580027655.01	0.816670	4.905761e-52	3.498313e-49
MsG0480018423.01	MsG0580027655.01	0.823570	1.290303e-53	1.115117e-50
MsG0580027394.01	MsG0580027655.01	0.828803	7.336251e-55	7.369579e-52
MsG0580027655.01	MsG0580027725.01	0.801800	7.587399e-49	3.656822e-46
MsG0580027655.01	MsG0580027726.01	0.867500	1.307790e-65	4.576004e-62
MsG0580027655.01	MsG0580027763.01	0.822494	2.299301e-53	1.927582e-50
MsG0580027655.01	MsG0580027826.01	0.896290	4.250337e-76	4.568951e-72
MsG0580027655.01	MsG0580027980.01	0.826250	3.007348e-54	2.805332e-51
MsG0580027655.01	MsG0580028059.01	0.807162	5.782420e-50	3.197700e-47
MsG0580027655.01	MsG0580028407.01	0.840496	8.398690e-58	1.198519e-54
MsG0580027655.01	MsG0580028551.01	0.804745	1.863958e-49	9.687845e-47
MsG0580027655.01	MsG0580029236.01	0.805288	1.435183e-49	7.563585e-47
MsG0580027655.01	MsG0580029414.01	0.814919	1.205399e-51	8.193462e-49
MsG0580027655.01	MsG0580029529.01	0.855463	6.201861e-62	1.433139e-58
MsG0580027655.01	MsG0580029734.01	0.814178	1.758388e-51	1.171571e-48
MsG0580027655.01	MsG0580029736.01	0.865569	5.368517e-65	1.754976e-61
MsG0580027655.01	MsG0580029912.01	0.805740	1.153585e-49	6.151013e-47
MsG0580027655.01	MsG0580030010.01	0.805402	1.358428e-49	7.180188e-47
MsG0580027655.01	MsG0680030313.01	0.801631	8.219898e-49	3.944616e-46
MsG0580027655.01	MsG0680030328.01	0.818605	1.796501e-52	1.350897e-49
MsG0580027655.01	MsG0680030515.01	0.839606	1.433297e-57	1.989493e-54
MsG0580027655.01	MsG0680030680.01	0.806064	9.860834e-50	5.301553e-47
MsG0580027655.01	MsG0680030784.01	0.861033	1.362561e-63	3.801667e-60
MsG0580027655.01	MsG0680030858.01	0.800282	1.550328e-48	7.190495e-46
MsG0580027655.01	MsG0680030895.01	0.832983	6.924741e-56	7.867120e-53
MsG0580027655.01	MsG0680030905.01	0.817054	4.024252e-52	2.900069e-49
MsG0580027655.01	MsG0680030908.01	0.848707	5.162463e-60	9.557587e-57
MsG0580027655.01	MsG0680031000.01	0.808216	3.454369e-50	1.963692e-47
MsG0580027655.01	MsG0680031263.01	0.831770	1.382648e-55	1.515506e-52
MsG0580027655.01	MsG0680031264.01	0.809040	2.303449e-50	1.338084e-47
MsG0580027655.01	MsG0680031469.01	0.808623	2.827189e-50	1.624275e-47
MsG0580027655.01	MsG0680031621.01	0.863976	1.694607e-64	5.234643e-61
MsG0580027655.01	MsG0680031708.01	0.804045	2.608019e-49	1.331224e-46
MsG0580027655.01	MsG0680031939.01	0.848691	5.216256e-60	9.651764e-57
MsG0580027655.01	MsG0680032827.01	0.800974	1.120366e-48	5.288472e-46
MsG0580027655.01	MsG0680032830.01	0.841853	3.693683e-58	5.498142e-55
MsG0580027655.01	MsG0680032832.01	0.838127	3.458490e-57	4.588092e-54
MsG0580027655.01	MsG0680033377.01	0.838396	2.948020e-57	3.943475e-54
MsG0580027655.01	MsG0680033459.01	0.808529	2.961840e-50	1.697553e-47
MsG0580027655.01	MsG0680034064.01	0.822319	2.524095e-53	2.105568e-50
MsG0580027655.01	MsG0680034235.01	0.813942	1.982799e-51	1.312591e-48
MsG0580027655.01	MsG0680034767.01	0.821800	3.329937e-53	2.736946e-50
MsG0580027655.01	MsG0680035307.01	0.805784	1.129341e-49	6.028372e-47
MsG0580027655.01	MsG0680035859.01	0.810892	9.196186e-51	5.611195e-48
MsG0580027655.01	MsG0680035877.01	0.807069	6.051158e-50	3.338189e-47
MsG0580027655.01	MsG0780035992.01	0.810011	1.425133e-50	8.495328e-48
MsG0580027655.01	MsG0780036307.01	0.832041	1.185017e-55	1.309141e-52
MsG0580027655.01	MsG0780036585.01	0.822128	2.795519e-53	2.319228e-50
MsG0580027655.01	MsG0780036593.01	0.840023	1.116136e-57	1.569761e-54
MsG0580027655.01	MsG0780036596.01	0.810799	9.628873e-51	5.860478e-48
MsG0580027655.01	MsG0780036602.01	0.813236	2.835281e-51	1.841261e-48
MsG0580027655.01	MsG0780036659.01	0.835475	1.642337e-56	2.010509e-53
MsG0580027655.01	MsG0780036664.01	0.806657	7.395488e-50	4.036385e-47
MsG0580027655.01	MsG0780036757.01	0.802717	4.914497e-49	2.424598e-46
MsG0580027655.01	MsG0780036800.01	0.829421	5.196166e-55	5.315639e-52
MsG0580027655.01	MsG0780036803.01	0.809205	2.123247e-50	1.238948e-47
MsG0580027655.01	MsG0780036979.01	0.848561	5.665759e-60	1.043905e-56
MsG0580027655.01	MsG0780037330.01	0.825549	4.413058e-54	4.035004e-51
MsG0580027655.01	MsG0780037341.01	0.846525	2.056105e-59	3.549221e-56
MsG0580027655.01	MsG0780037395.01	0.839896	1.204422e-57	1.686938e-54
MsG0580027655.01	MsG0780038351.01	0.805858	1.089516e-49	5.827016e-47
MsG0580027655.01	MsG0780038784.01	0.820259	7.540042e-53	5.936511e-50
MsG0580027655.01	MsG0780038846.01	0.805425	1.343471e-49	7.105144e-47
MsG0580027655.01	MsG0780038847.01	0.828445	8.954018e-55	8.902092e-52
MsG0580027655.01	MsG0780038948.01	0.830034	3.685982e-55	3.838220e-52
MsG0580027655.01	MsG0780039186.01	0.827127	1.857054e-54	1.776539e-51
MsG0580027655.01	MsG0780039439.01	0.812291	4.564851e-51	2.891066e-48
MsG0580027655.01	MsG0780039940.01	0.837604	4.713342e-57	6.154072e-54
MsG0580027655.01	MsG0780039975.01	0.839071	1.972522e-57	2.693467e-54
MsG0580027655.01	MsG0780040278.01	0.842325	2.770243e-58	4.185604e-55
MsG0580027655.01	MsG0780040286.01	0.806805	6.881440e-50	3.770434e-47
MsG0580027655.01	MsG0780040287.01	0.805240	1.468741e-49	7.730846e-47
MsG0580027655.01	MsG0780040430.01	0.897900	8.974233e-77	1.035759e-72
MsG0580027655.01	MsG0780040431.01	0.897556	1.253450e-76	1.423966e-72
MsG0580027655.01	MsG0780040888.01	0.821877	3.196832e-53	2.633339e-50
MsG0580027655.01	MsG0780041091.01	0.807873	4.086890e-50	2.302145e-47
MsG0580027655.01	MsG0780041259.01	0.814470	1.516087e-51	1.018211e-48
MsG0580027655.01	MsG0780041387.01	0.808313	3.292815e-50	1.876637e-47
MsG0580027655.01	MsG0780041391.01	0.807785	4.266506e-50	2.397904e-47
MsG0580027655.01	MsG0780041435.01	0.813809	2.120660e-51	1.398930e-48
MsG0580027655.01	MsG0780041440.01	0.823262	1.522447e-53	1.304351e-50
MsG0580027655.01	MsG0780041482.01	0.801096	1.057941e-48	5.009281e-46
MsG0580027655.01	MsG0780041634.01	0.809405	1.922804e-50	1.128005e-47
MsG0580027655.01	MsG0780041673.01	0.842533	2.439489e-58	3.709964e-55
MsG0580027655.01	MsG0780041699.01	0.807077	6.028547e-50	3.326293e-47
MsG0580027655.01	MsG0780041729.01	-0.817213	3.704915e-52	2.681557e-49
MsG0580027655.01	MsG0780041747.01	0.813588	2.372773e-51	1.555833e-48
MsG0580027655.01	MsG0780041791.01	0.804218	2.400193e-49	1.230540e-46
MsG0580027655.01	MsG0880041834.01	0.848109	7.555254e-60	1.371640e-56
MsG0580027655.01	MsG0880041947.01	0.819695	1.014503e-52	7.863141e-50
MsG0580027655.01	MsG0880042044.01	0.800451	1.432533e-48	6.672385e-46
MsG0580027655.01	MsG0880043030.01	0.803839	2.878031e-49	1.461307e-46
MsG0580027655.01	MsG0880043128.01	0.806814	6.850188e-50	3.754263e-47
MsG0580027655.01	MsG0880043965.01	0.810407	1.170415e-50	7.049113e-48
MsG0580027655.01	MsG0880044005.01	0.814935	1.195892e-51	8.132260e-49
MsG0580027655.01	MsG0880044036.01	0.803133	4.030671e-49	2.009673e-46
MsG0580027655.01	MsG0880044043.01	0.801352	9.377542e-49	4.468713e-46
MsG0580027655.01	MsG0880044487.01	0.839966	1.155087e-57	1.621506e-54
MsG0580027655.01	MsG0880044691.01	0.800816	1.206646e-48	5.672485e-46
MsG0580027655.01	MsG0880044704.01	0.818398	2.001285e-52	1.496514e-49
MsG0580027655.01	MsG0880045017.01	0.806250	9.012096e-50	4.868306e-47
MsG0580027655.01	MsG0880045558.01	0.839938	1.174243e-57	1.646925e-54
MsG0580027655.01	MsG0880045668.01	0.825984	3.478986e-54	3.220861e-51
MsG0580027655.01	MsG0880045735.01	0.813222	2.854528e-51	1.853084e-48
MsG0580027655.01	MsG0880045765.01	0.815654	8.273630e-52	5.738470e-49
MsG0580027655.01	MsG0880046382.01	0.801867	7.353693e-49	3.550309e-46
MsG0580027655.01	MsG0880046516.01	0.804021	2.638765e-49	1.346079e-46
MsG0580027655.01	MsG0880046724.01	0.826361	2.830073e-54	2.648334e-51
MsG0580027655.01	MsG0880046736.01	0.822664	2.098816e-53	1.768079e-50
MsG0580027655.01	MsG0880046765.01	0.821454	4.003485e-53	3.258431e-50
MsG0580027655.01	MsG0880046867.01	0.819098	1.388368e-52	1.058354e-49
MsG0580027655.01	MsG0880047046.01	0.816022	6.852008e-52	4.800394e-49
MsG0580027655.01	MsG0880047063.01	0.814247	1.697475e-51	1.133128e-48
MsG0580027655.01	MsG0880047135.01	0.845521	3.856817e-59	6.444421e-56
MsG0580027655.01	MsG0880047154.01	0.843915	1.044252e-58	1.658594e-55
MsG0580027655.01	MsG0880047394.01	0.846351	2.294438e-59	3.938090e-56
MsG0580027655.01	MsG0880047538.01	0.870403	1.498269e-66	5.820766e-63
MsG0580027655.01	MsG0880047696.01	0.843532	1.322815e-58	2.075693e-55
MsG0580027655.01	MsG0880047703.01	0.801471	8.864961e-49	4.237110e-46
MsG0580027655.01	MsG0880047754.01	0.825365	4.877752e-54	4.436635e-51
MsG0580027655.01	MsG0880047764.01	0.802958	4.381943e-49	2.175091e-46
MsG0280006461.01	MsG0580027655.01	0.801608	8.308217e-49	3.984673e-46
MsG0280006592.01	MsG0580027655.01	0.845948	2.953242e-59	5.003615e-56
MsG0280006601.01	MsG0580027655.01	0.810043	1.402596e-50	8.367931e-48
MsG0280006914.01	MsG0580027655.01	0.804292	2.317313e-49	1.190332e-46
MsG0280006937.01	MsG0580027655.01	0.873365	1.556421e-67	6.736517e-64
MsG0280006996.01	MsG0580027655.01	0.814665	1.372635e-51	9.266464e-49
MsG0280007062.01	MsG0580027655.01	0.813460	2.531609e-51	1.654354e-48
MsG0280007075.01	MsG0580027655.01	0.801880	7.306126e-49	3.528599e-46
MsG0280007112.01	MsG0580027655.01	0.830684	2.556795e-55	2.713353e-52
MsG0280007118.01	MsG0580027655.01	0.812312	4.517747e-51	2.862733e-48
MsG0280007432.01	MsG0580027655.01	0.823720	1.189612e-53	1.032668e-50
MsG0280007531.01	MsG0580027655.01	0.803102	4.091830e-49	2.038467e-46
MsG0280007575.01	MsG0580027655.01	0.837439	5.193679e-57	6.746845e-54
MsG0280007955.01	MsG0580027655.01	0.808250	3.396778e-50	1.932718e-47
MsG0280007976.01	MsG0580027655.01	0.837103	6.331152e-57	8.139971e-54
MsG0280008390.01	MsG0580027655.01	0.813182	2.912971e-51	1.888974e-48
MsG0280008418.01	MsG0580027655.01	0.852421	4.666759e-61	9.745597e-58
MsG0280008899.01	MsG0580027655.01	0.837451	5.157413e-57	6.702359e-54
MsG0280008928.01	MsG0580027655.01	0.813495	2.486670e-51	1.626510e-48
MsG0280008929.01	MsG0580027655.01	0.821152	4.700509e-53	3.793857e-50
MsG0280009256.01	MsG0580027655.01	0.821137	4.737853e-53	3.822500e-50
MsG0280009635.01	MsG0580027655.01	0.811707	6.119972e-51	3.815151e-48
MsG0280009685.01	MsG0580027655.01	0.827014	1.976261e-54	1.884373e-51
MsG0280009708.01	MsG0580027655.01	0.807091	5.988059e-50	3.305212e-47
MsG0280010184.01	MsG0580027655.01	0.812558	3.991671e-51	2.546032e-48
MsG0280010216.01	MsG0580027655.01	0.806830	6.800041e-50	3.728172e-47
MsG0280010271.01	MsG0580027655.01	0.811824	5.771838e-51	3.609373e-48
MsG0280010503.01	MsG0580027655.01	0.859035	5.464934e-63	1.423224e-59

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580027655.01.T01	MTR_5g063720	93.427	213	13	1	1	212	1	213	2.35e-139	388
MsG0580027655.01.T01	MTR_3g074450	53.913	230	74	11	1	211	1	217	2.10e-59	186

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580027655.01.T01	AT1G78170	35.217	230	105	9	1	204	1	212	8.69e-25	97.4
MsG0580027655.01.T01	AT1G22250	43.478	115	51	3	111	211	85	199	3.42e-16	74.3
MsG0580027655.01.T01	AT4G08910	74.359	39	10	0	158	196	159	197	1.05e-15	73.2

Find 33 sgRNAs with CRISPR-Local

Find 56 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTCTGATCAAGAATTCTTTA+AGG	0.147055	5:+65319896	MsG0580027655.01.T01:CDS
GATTACATAGACTTATTTAT+TGG	0.200096	5:-65320678	None:intergenic
CTTCACAAAAGAAGAGAAAA+TGG	0.266395	5:+65319859	MsG0580027655.01.T01:CDS
GCGAAGTTCTATATCAAATA+TGG	0.295622	5:-65319949	None:intergenic
ATCAATTAGCAAGAATAAAA+AGG	0.319819	5:+65320430	MsG0580027655.01.T01:CDS
TATTATATATTTCAAACAAA+AGG	0.340498	5:+65320725	MsG0580027655.01.T01:three_prime_UTR
CAAGAACAACCACTTCTAAT+TGG	0.345178	5:+65320654	MsG0580027655.01.T01:three_prime_UTR
AAGGATCTTACACATGATCT+AGG	0.356603	5:+65319915	MsG0580027655.01.T01:CDS
GGATGCATGAATTTGCAATT+AGG	0.374086	5:-65320569	None:intergenic
AAACCACTCGTGTTTGAATA+TGG	0.381186	5:+65319776	MsG0580027655.01.T01:exon
CAAATTATACAACTCCTTAG+AGG	0.387146	5:-65320769	None:intergenic
GCAACAATACCTCAATGTTC+AGG	0.426385	5:+65320001	MsG0580027655.01.T01:CDS
TTAATCTACCTCTACCTCTA+AGG	0.434008	5:+65320755	MsG0580027655.01.T01:three_prime_UTR
ATTATATATTTCAAACAAAA+GGG	0.459409	5:+65320726	MsG0580027655.01.T01:three_prime_UTR
AATTTGGAAGGGTTCTGATC+TGG	0.466878	5:-65320596	None:intergenic
GAAGGGTTCTGATCTGGTGG+TGG	0.491999	5:-65320590	None:intergenic
TGCCATTTATCTGAAGGAAA+AGG	0.492962	5:-65319981	None:intergenic
AAGAATTCTTGATCAGAAAG+TGG	0.498028	5:-65319891	None:intergenic
AAGGAGTTGTATAATTTGAC+TGG	0.504963	5:+65320774	MsG0580027655.01.T01:three_prime_UTR
TTCACAAAAGAAGAGAAAAT+GGG	0.522716	5:+65319860	MsG0580027655.01.T01:CDS
ATACAACTCCTTAGAGGTAG+AGG	0.527574	5:-65320763	None:intergenic
TATTGTTGCCATTTATCTGA+AGG	0.533510	5:-65319987	None:intergenic
AGGATCTTACACATGATCTA+GGG	0.553583	5:+65319916	MsG0580027655.01.T01:CDS
TGTGAAGCATCAAAATCTGT+AGG	0.557840	5:-65319843	None:intergenic
CACATGTCAAATTAAGCTCA+AGG	0.558418	5:-65320349	None:intergenic
AATTTGCAATTAGGACAAGA+AGG	0.564845	5:-65320560	None:intergenic
TTTATTGGACCAATTAGAAG+TGG	0.571145	5:-65320663	None:intergenic
TTGGAAGGGTTCTGATCTGG+TGG	0.597114	5:-65320593	None:intergenic
TGGTTATCATCATCATCAGA+TGG	0.614533	5:+65320464	MsG0580027655.01.T01:CDS
TATTATATACCTGAACATTG+AGG	0.617071	5:-65320010	None:intergenic
ACATAAATTTATGATACACA+AGG	0.669913	5:-65320830	None:intergenic
AGACCATATTCAAACACGAG+TGG	0.676013	5:-65319779	None:intergenic
TTGTATGAAGTGTCACATGT+TGG	0.683627	5:+65320517	MsG0580027655.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATTATATATTTCAAACAAAA+GGG	+	Chr5:65320726-65320745	MsG0580027655.01.T01:three_prime_UTR	10.0%
!!	TATTATATATTTCAAACAAA+AGG	+	Chr5:65320725-65320744	MsG0580027655.01.T01:three_prime_UTR	10.0%
!!	AAAATGAAATATATTAACCT+CGG	-	Chr5:65320089-65320108	None:intergenic	15.0%
!!	ACATAAATTTATGATACACA+AGG	-	Chr5:65320833-65320852	None:intergenic	20.0%
!!	ATAAAATATTATTGCTACCT+CGG	-	Chr5:65320135-65320154	None:intergenic	20.0%
!!	ATCAATTAGCAAGAATAAAA+AGG	+	Chr5:65320430-65320449	MsG0580027655.01.T01:CDS	20.0%
!!	GATTACATAGACTTATTTAT+TGG	-	Chr5:65320681-65320700	None:intergenic	20.0%
!	ATAAAAAGGATTCTTCATCA+TGG	+	Chr5:65320444-65320463	MsG0580027655.01.T01:CDS	25.0%
!	CGAAAATGTGCTTATAAAAA+GGG	-	Chr5:65320045-65320064	None:intergenic	25.0%
!	TATTATATACCTGAACATTG+AGG	-	Chr5:65320013-65320032	None:intergenic	25.0%
!	TTCAAAATAAATTAGAACCG+AGG	+	Chr5:65320115-65320134	MsG0580027655.01.T01:intron	25.0%
!	TTCACAAAAGAAGAGAAAAT+GGG	+	Chr5:65319860-65319879	MsG0580027655.01.T01:CDS	25.0%
!	TTCTCTTCAAAAATTTGGAA+GGG	-	Chr5:65320610-65320629	None:intergenic	25.0%
!	TTCTGATCAAGAATTCTTTA+AGG	+	Chr5:65319896-65319915	MsG0580027655.01.T01:CDS	25.0%
	AAGAATTCTTGATCAGAAAG+TGG	-	Chr5:65319894-65319913	None:intergenic	30.0%
	AAGGAGTTGTATAATTTGAC+TGG	+	Chr5:65320774-65320793	MsG0580027655.01.T01:three_prime_UTR	30.0%
	AATGTGCTTATAAAAAGGGA+CGG	-	Chr5:65320041-65320060	None:intergenic	30.0%
	AATTTGCAATTAGGACAAGA+AGG	-	Chr5:65320563-65320582	None:intergenic	30.0%
	CAAATTATACAACTCCTTAG+AGG	-	Chr5:65320772-65320791	None:intergenic	30.0%
	CCTTGTTCTCTTCAAAAATT+TGG	-	Chr5:65320615-65320634	None:intergenic	30.0%
	CTTCACAAAAGAAGAGAAAA+TGG	+	Chr5:65319859-65319878	MsG0580027655.01.T01:CDS	30.0%
	GCGAAAATGTGCTTATAAAA+AGG	-	Chr5:65320046-65320065	None:intergenic	30.0%
	GCGAAGTTCTATATCAAATA+TGG	-	Chr5:65319952-65319971	None:intergenic	30.0%
	GTTCTCTTCAAAAATTTGGA+AGG	-	Chr5:65320611-65320630	None:intergenic	30.0%
	TTACCTGAAAAATCATCTCT+TGG	+	Chr5:65320311-65320330	MsG0580027655.01.T01:CDS	30.0%
	TTTATTGGACCAATTAGAAG+TGG	-	Chr5:65320666-65320685	None:intergenic	30.0%
!	TAAATTTTCTCATGCAGTCA+GGG	+	Chr5:65320225-65320244	MsG0580027655.01.T01:intron	30.0%
!	TATTGTTGCCATTTATCTGA+AGG	-	Chr5:65319990-65320009	None:intergenic	30.0%
!	TTAAATTTTCTCATGCAGTC+AGG	+	Chr5:65320224-65320243	MsG0580027655.01.T01:intron	30.0%
!!	CCAAATTTTTGAAGAGAACA+AGG	+	Chr5:65320612-65320631	MsG0580027655.01.T01:CDS	30.0%
!!!	AGAGATGATTTTTCAGGTAA+AGG	-	Chr5:65320311-65320330	None:intergenic	30.0%
!!!	AGATTCTTTTTTTGGACTCA+TGG	-	Chr5:65319823-65319842	None:intergenic	30.0%
!!!	GAGATGATTTTTCAGGTAAA+GGG	-	Chr5:65320310-65320329	None:intergenic	30.0%
!!!	TCTGTAGGAGATTCTTTTTT+TGG	-	Chr5:65319831-65319850	None:intergenic	30.0%
	AAACCACTCGTGTTTGAATA+TGG	+	Chr5:65319776-65319795	MsG0580027655.01.T01:exon	35.0%
	AAGGATCTTACACATGATCT+AGG	+	Chr5:65319915-65319934	MsG0580027655.01.T01:CDS	35.0%
	AGGATCTTACACATGATCTA+GGG	+	Chr5:65319916-65319935	MsG0580027655.01.T01:CDS	35.0%
	CAAGAACAACCACTTCTAAT+TGG	+	Chr5:65320654-65320673	MsG0580027655.01.T01:three_prime_UTR	35.0%
	CACATGTCAAATTAAGCTCA+AGG	-	Chr5:65320352-65320371	None:intergenic	35.0%
	GGATGCATGAATTTGCAATT+AGG	-	Chr5:65320572-65320591	None:intergenic	35.0%
	TGGTTATCATCATCATCAGA+TGG	+	Chr5:65320464-65320483	MsG0580027655.01.T01:CDS	35.0%
	TTAATCTACCTCTACCTCTA+AGG	+	Chr5:65320755-65320774	MsG0580027655.01.T01:three_prime_UTR	35.0%
!	CACCTTTTCCTTCAGATAAA+TGG	+	Chr5:65319979-65319998	MsG0580027655.01.T01:CDS	35.0%
!	TGACCAAGAGATGATTTTTC+AGG	-	Chr5:65320317-65320336	None:intergenic	35.0%
!	TGCCATTTATCTGAAGGAAA+AGG	-	Chr5:65319984-65320003	None:intergenic	35.0%
!	TGTGAAGCATCAAAATCTGT+AGG	-	Chr5:65319846-65319865	None:intergenic	35.0%
!	TTGTATGAAGTGTCACATGT+TGG	+	Chr5:65320517-65320536	MsG0580027655.01.T01:CDS	35.0%
!!	CTAGTTTTTAATTAGAGCCG+AGG	+	Chr5:65320069-65320088	MsG0580027655.01.T01:intron	35.0%
	AGACCATATTCAAACACGAG+TGG	-	Chr5:65319782-65319801	None:intergenic	40.0%
	ATACAACTCCTTAGAGGTAG+AGG	-	Chr5:65320766-65320785	None:intergenic	40.0%
	GCAACAATACCTCAATGTTC+AGG	+	Chr5:65320001-65320020	MsG0580027655.01.T01:CDS	40.0%
!	AATTTGGAAGGGTTCTGATC+TGG	-	Chr5:65320599-65320618	None:intergenic	40.0%
!!!	CTGAAGGAAAAGGTGTTTTG+AGG	-	Chr5:65319974-65319993	None:intergenic	40.0%
	TTCTCTCCAGTAGTTGTGAG+CGG	-	Chr5:65319742-65319761	None:intergenic	45.0%
!	TTGGAAGGGTTCTGATCTGG+TGG	-	Chr5:65320596-65320615	None:intergenic	50.0%
!	GAAGGGTTCTGATCTGGTGG+TGG	-	Chr5:65320593-65320612	None:intergenic	55.0%

Chromosome	Type	Strat	End	Strand	Name
Chr5	gene	65319741	65320881	65319741	ID=MsG0580027655.01;Name=MsG0580027655.01
Chr5	mRNA	65319741	65320881	65319741	ID=MsG0580027655.01.T01;Parent=MsG0580027655.01;Name=MsG0580027655.01.T01;_AED=0.18;_eAED=0.18;_QI=54\|1\|1\|1\|1\|1\|2\|229\|212
Chr5	exon	65319741	65320022	65319741	ID=MsG0580027655.01.T01:exon:4225;Parent=MsG0580027655.01.T01
Chr5	exon	65320242	65320881	65320242	ID=MsG0580027655.01.T01:exon:4226;Parent=MsG0580027655.01.T01
Chr5	five_prime_UTR	65319741	65319794	65319741	ID=MsG0580027655.01.T01:five_prime_utr;Parent=MsG0580027655.01.T01
Chr5	CDS	65319795	65320022	65319795	ID=MsG0580027655.01.T01:cds;Parent=MsG0580027655.01.T01
Chr5	CDS	65320242	65320652	65320242	ID=MsG0580027655.01.T01:cds;Parent=MsG0580027655.01.T01
Chr5	three_prime_UTR	65320653	65320881	65320653	ID=MsG0580027655.01.T01:three_prime_utr;Parent=MsG0580027655.01.T01

Gene Sequence

>MsG0580027655.01.T01

ATGGTCTCACTTCACAAAGCACTAGCCATGAGTCCAAAAAAAGAATCTCCTACAGATTTTGATGCTTCACAAAAGAAGAGAAAATGGGAAGAATCACCACTTTCTGATCAAGAATTCTTTAAGGATCTTACACATGATCTAGGGAAAAGAAAATCCATATTTGATATAGAACTTCGCCTCAAAACACCTTTTCCTTCAGATAAATGGCAACAATACCTCAATGTTCAGTCAGGGCAAATACAATTGTGTAACACAAAGATGAATAAGAAAACACAAGAATCAAAAAGAGAGTACCCTTTACCTGAAAAATCATCTCTTGGTCATTTAAGCTTAGACCTTGAGCTTAATTTGACATGTGAATCATTGAAGAAAAAAGAAGAAAGTTATTTTGAAAAGAAGAATAATCTAGTGAATGAATCAATTAGCAAGAATAAAAAGGATTCTTCATCATGGTTATCATCATCATCAGATGGTGATGATTACAAAGAAATGATTGCAACAGTTTGTATGAAGTGTCACATGTTGGTAATGCTTTGCAAATCATCTCCTTCTTGTCCTAATTGCAAATTCATGCATCCACCACCAGATCAGAACCCTTCCAAATTTTTGAAGAGAACAAGGTTTAGTTTCTTGACATAA

Protein sequence

>MsG0580027655.01.T01

MVSLHKALAMSPKKESPTDFDASQKKRKWEESPLSDQEFFKDLTHDLGKRKSIFDIELRLKTPFPSDKWQQYLNVQSGQIQLCNTKMNKKTQESKREYPLPEKSSLGHLSLDLELNLTCESLKKKEESYFEKKNNLVNESISKNKKDSSSWLSSSSDGDDYKEMIATVCMKCHMLVMLCKSSPSCPNCKFMHPPPDQNPSKFLKRTRFSFLT*