AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580025406.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580025406.01.T01 MTR_5g027920 91.538 130 10 1 1 130 568 696 4.27e-70 223
MsG0580025406.01.T01 MTR_5g027920 91.538 130 10 1 1 130 570 698 5.22e-70 223
MsG0580025406.01.T01 MTR_5g027920 91.538 130 10 1 1 130 571 699 6.34e-70 222
MsG0580025406.01.T01 MTR_5g019630 64.706 85 16 2 37 121 47 117 1.08e-26 96.7
MsG0580025406.01.T02 MTR_5g027920 79.149 235 32 2 14 247 13 231 1.66e-107 330
MsG0580025406.01.T02 MTR_5g027920 79.149 235 32 2 14 247 13 231 1.67e-107 330
MsG0580025406.01.T02 MTR_5g027920 78.723 235 31 2 14 247 13 229 1.33e-106 327
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580025406.01.T01 AT5G45610 50.427 117 57 1 12 128 529 644 2.76e-22 91.3

Find 121 sgRNAs with CRISPR-Local

Find 549 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAAGAGCTTACATCTAAAA+TGG 0.162123 5:+18145043 None:intergenic
TTGACAACTGGCAAACAATT+TGG 0.190008 5:+18145130 None:intergenic
CCCATACTGCCAGCAAATTC+TGG 0.192225 5:+18145191 None:intergenic
GCGCCGAGGTTGGGGAATTT+TGG 0.233363 5:-18139309 MsG0580025406.01.T01:three_prime_UTR
TTTCATTAGATGTGGTTTAC+TGG 0.271908 5:-18140675 MsG0580025406.01.T01:intron
TCGTGATCTTCATGGAAATT+TGG 0.271991 5:+18141893 None:intergenic
TTGCATTGGGAAGGACCTTT+TGG 0.279044 5:-18142044 MsG0580025406.01.T01:five_prime_UTR
CAGAAAGTGGCCAATAGTTT+TGG 0.280980 5:+18140804 None:intergenic
CCTTTGTTGCTTCGGGAGTA+TGG 0.284363 5:+18144973 None:intergenic
TTTCTTCTTCGTGATCTTCA+TGG 0.285824 5:+18141885 None:intergenic
GTCTTCAAAATTTCGAAATC+TGG 0.285887 5:+18140726 None:intergenic
CCCAGAATTTGCTGGCAGTA+TGG 0.286446 5:-18145192 MsG0580025406.01.T01:five_prime_UTR
CTTACATCTAAAATGGGTTT+TGG 0.289397 5:+18145050 None:intergenic
TGGCAGCTCATTGTCTGCTT+TGG 0.305196 5:+18140189 None:intergenic
GTTGCTTGATCTATGTAGTA+TGG 0.330499 5:-18144570 MsG0580025406.01.T01:five_prime_UTR
TGTGACACCTTTGTTGCTTC+GGG 0.333133 5:+18144966 None:intergenic
TGTTGAAGGTCCAAAACTAT+TGG 0.346366 5:-18140814 MsG0580025406.01.T01:intron
CCAGAATTTGCTGGCAGTAT+GGG 0.347237 5:-18145191 MsG0580025406.01.T01:five_prime_UTR
GGTAGGAACTGGTGCCTAAA+TGG 0.350551 5:-18139700 MsG0580025406.01.T01:three_prime_UTR
GAGTATGGACTTTGGGAGTA+TGG 0.351120 5:+18144988 None:intergenic
CTTTCCAGTGCACTCTGCTC+AGG 0.352318 5:-18142090 MsG0580025406.01.T01:intron
GAGACAACTGCTAAAGATAA+AGG 0.354643 5:-18145292 MsG0580025406.01.T01:five_prime_UTR
TCTCTACCCTATTCTTGAAT+TGG 0.359195 5:+18139811 None:intergenic
GCTTCGGGAGTATGGACTTT+GGG 0.359975 5:+18144981 None:intergenic
ATGTGACACCTTTGTTGCTT+CGG 0.361719 5:+18144965 None:intergenic
TTGCTTGCCAATTCAAGAAT+AGG 0.364017 5:-18139818 MsG0580025406.01.T01:CDS
CTATCTGCTTCTCACCATTT+AGG 0.370763 5:+18139686 None:intergenic
CTGTCCTTCCTTGCATCATC+AGG 0.373823 5:-18140319 MsG0580025406.01.T01:five_prime_UTR
TGCTTGCCAATTCAAGAATA+GGG 0.377875 5:-18139817 MsG0580025406.01.T01:CDS
TAGGAACTCGCGCCGAGGTT+GGG 0.382361 5:-18139318 MsG0580025406.01.T01:three_prime_UTR
TCTTCCAAACGATGACCTTT+CGG 0.386545 5:-18145230 MsG0580025406.01.T01:five_prime_UTR
AGCTCATGAAACAGATGTAT+TGG 0.393375 5:-18144609 MsG0580025406.01.T01:five_prime_UTR
AGGGACAGTGTCGTCATTGA+TGG 0.397438 5:-18142070 MsG0580025406.01.T01:five_prime_UTR
TGAGAAATTTGCTTGAATAC+AGG 0.407082 5:-18141554 MsG0580025406.01.T01:intron
TGACCTCTCCCAGAATTTGC+TGG 0.416539 5:-18145200 MsG0580025406.01.T01:five_prime_UTR
CCTTACAACCTCATGTGAAT+TGG 0.428773 5:-18141939 MsG0580025406.01.T01:five_prime_UTR
TTATTCTACGCGGTAGGAAC+TGG 0.437975 5:-18139711 MsG0580025406.01.T01:three_prime_UTR
AGACAACTGCTAAAGATAAA+GGG 0.439161 5:-18145291 MsG0580025406.01.T01:five_prime_UTR
CAGAATTTGCTGGCAGTATG+GGG 0.440618 5:-18145190 MsG0580025406.01.T01:five_prime_UTR
AATGGCTACTTTGACATTTG+AGG 0.441826 5:-18139931 MsG0580025406.01.T01:CDS
CATGAGGTTGTAAGGCCACT+TGG 0.442275 5:+18141947 None:intergenic
AAGAAGTAGTGTACTTTGAG+AGG 0.443585 5:-18141821 MsG0580025406.01.T01:five_prime_UTR
CCAATTCACATGAGGTTGTA+AGG 0.443903 5:+18141939 None:intergenic
CCATACTGCCAGCAAATTCT+GGG 0.445964 5:+18145192 None:intergenic
TTAGGAACTCGCGCCGAGGT+TGG 0.446388 5:-18139319 MsG0580025406.01.T01:three_prime_UTR
GAAGAGCTTACATCTAAAAT+GGG 0.448452 5:+18145044 None:intergenic
CTTGCATCATCAGGACAACC+TGG 0.453187 5:-18140310 MsG0580025406.01.T01:five_prime_UTR
GAATTGCTCAAGAAGGATGC+TGG 0.461615 5:-18141498 MsG0580025406.01.T01:five_prime_UTR
AGGAACTCGCGCCGAGGTTG+GGG 0.467536 5:-18139317 MsG0580025406.01.T01:three_prime_UTR
TTGAAGACATCCTTTAGGAT+TGG 0.470242 5:-18140711 MsG0580025406.01.T01:five_prime_UTR
TTCTGCCGTGGTTGCAAAGA+GGG 0.476597 5:-18140786 MsG0580025406.01.T01:five_prime_UTR
AGACTTCATCCCAAGTGATC+TGG 0.477375 5:+18139780 None:intergenic
TAAGCCGAAAGGTCATCGTT+TGG 0.479158 5:+18145226 None:intergenic
TTGAAATCTTTATGGGCCAT+AGG 0.479672 5:-18140285 MsG0580025406.01.T01:exon
AACACTTACAATTTAGTACT+AGG 0.482101 5:+18141438 None:intergenic
GTCATTGATGGAATTTGCAT+TGG 0.482665 5:-18142058 MsG0580025406.01.T01:five_prime_UTR
TGTCTATCTTTCATTAGATG+TGG 0.487513 5:-18140683 MsG0580025406.01.T01:five_prime_UTR
TTTATTCTATAGCTTGGGGT+TGG 0.491017 5:-18145641 MsG0580025406.01.T01:intron
TGCTTCGGGAGTATGGACTT+TGG 0.492039 5:+18144980 None:intergenic
AGGAAATGAAAACGAGCAGC+AGG 0.502080 5:-18139886 MsG0580025406.01.T01:CDS
GGGTTGGACGGTGTGAAAGA+TGG 0.502417 5:-18142013 MsG0580025406.01.T01:five_prime_UTR
TCATTGATGGAATTTGCATT+GGG 0.504069 5:-18142057 MsG0580025406.01.T01:five_prime_UTR
GGTTGGACGGTGTGAAAGAT+GGG 0.515760 5:-18142012 MsG0580025406.01.T01:five_prime_UTR
ACTTTAATCCAAATGACAAA+AGG 0.517232 5:+18139215 None:intergenic
TATTTCGGAATTGCTCAAGA+AGG 0.519223 5:-18141505 MsG0580025406.01.T01:five_prime_UTR
GACGCACATACCAGATCACT+TGG 0.519231 5:-18139790 MsG0580025406.01.T01:CDS
TTATTGCAATAGAGAGCCTA+TGG 0.521571 5:+18140269 None:intergenic
TACGCGATTTAACAGAAAAG+AGG 0.525701 5:-18139956 MsG0580025406.01.T01:CDS
TTTAACAGAAAAGAGGGTAA+TGG 0.527317 5:-18139949 MsG0580025406.01.T01:CDS
TGATGGAATTTGCATTGGGA+AGG 0.528939 5:-18142053 MsG0580025406.01.T01:five_prime_UTR
CACTTCTAAGTTATTCCTCA+TGG 0.529954 5:+18145618 None:intergenic
AGGTCGCAACCAACTTGTCT+CGG 0.537834 5:-18139911 MsG0580025406.01.T01:CDS
AGACAATCAGCCAATCCTAA+AGG 0.539370 5:+18140701 None:intergenic
ATTCAGGACATTTCTTATGC+GGG 0.543878 5:-18140036 MsG0580025406.01.T01:intron
GTATTCAAGCAAATTTCTCA+TGG 0.550266 5:+18141557 None:intergenic
TTTGCAACCACGGCAGAAAG+TGG 0.550804 5:+18140791 None:intergenic
ATAACGATGGCAGAATATGA+TGG 0.552624 5:+18139978 None:intergenic
CCAACCCGTCAAAATCCAAA+AGG 0.553127 5:+18142029 None:intergenic
CTTAGAAAAGCAAATCATGA+TGG 0.555960 5:+18141841 None:intergenic
CCCATAAAGATTTCAAAACC+AGG 0.555988 5:+18140292 None:intergenic
CATTCAGGACATTTCTTATG+CGG 0.558492 5:-18140037 MsG0580025406.01.T01:intron
CTAAATGGTGAGAAGCAGAT+AGG 0.559492 5:-18139685 MsG0580025406.01.T01:three_prime_UTR
CCATACTCCCGAAGCAACAA+AGG 0.561723 5:-18144973 MsG0580025406.01.T01:five_prime_UTR
GGAGTTGAAAATAAGCAGAA+AGG 0.563265 5:-18140353 MsG0580025406.01.T01:five_prime_UTR
GATGGCAGAATATGATGGAC+TGG 0.565546 5:+18139983 None:intergenic
TATTCTTGAATTGGCAAGCA+AGG 0.566030 5:+18139820 None:intergenic
ACGCGATTTAACAGAAAAGA+GGG 0.567311 5:-18139955 MsG0580025406.01.T01:CDS
ATTTCCTTTCCGAGACAAGT+TGG 0.573669 5:+18139902 None:intergenic
TTGTCCTGATGATGCAAGGA+AGG 0.579130 5:+18140315 None:intergenic
CTGCCAGCAAATTCTGGGAG+AGG 0.579408 5:+18145197 None:intergenic
TTTCCAGTGCACTCTGCTCA+GGG 0.580961 5:-18142089 MsG0580025406.01.T01:intron
AATTGCTCAAGAAGGATGCT+GGG 0.584045 5:-18141497 MsG0580025406.01.T01:five_prime_UTR
AGAAGTAGTGTACTTTGAGA+GGG 0.584466 5:-18141820 MsG0580025406.01.T01:five_prime_UTR
AAAAGAACAAGGGAATTGGA+AGG 0.588820 5:+18139757 None:intergenic
TGTTAAATCGCGTATAACGA+TGG 0.589287 5:+18139965 None:intergenic
AAATGAAAACGAGCAGCAGG+AGG 0.599916 5:-18139883 MsG0580025406.01.T01:CDS
ATAGCTTGGGGTTGGCCATG+AGG 0.603805 5:-18145633 MsG0580025406.01.T01:intron
CTATTGGCCACTTTCTGCCG+TGG 0.606865 5:-18140798 MsG0580025406.01.T01:five_prime_UTR
CGAGCAGCAGGAGGACAGCA+TGG 0.611280 5:-18139874 MsG0580025406.01.T01:CDS
GCAACCAACTTGTCTCGGAA+AGG 0.612395 5:-18139906 MsG0580025406.01.T01:CDS
CAGGTTGTCCTGATGATGCA+AGG 0.612543 5:+18140311 None:intergenic
GACAACTGCTAAAGATAAAG+GGG 0.619338 5:-18145290 MsG0580025406.01.T01:five_prime_UTR
GATGTATTATTCTACGCGGT+AGG 0.620908 5:-18139717 MsG0580025406.01.T01:three_prime_UTR
CAACCAAAATTCCCCAACCT+CGG 0.624781 5:+18139306 None:intergenic
TGTCTCCCTCTTTGCAACCA+CGG 0.634999 5:+18140781 None:intergenic
TTTCTGCCGTGGTTGCAAAG+AGG 0.636121 5:-18140787 MsG0580025406.01.T01:five_prime_UTR
AGAAATGCTAAGCAGAAAAG+CGG 0.638953 5:-18141977 MsG0580025406.01.T01:five_prime_UTR
GGGAGACAGTAGTAGCGGAA+CGG 0.640764 5:-18140766 MsG0580025406.01.T01:five_prime_UTR
AAAGAGGGAGACAGTAGTAG+CGG 0.658010 5:-18140771 MsG0580025406.01.T01:five_prime_UTR
GAGTATGGAAACAATCATTG+AGG 0.662473 5:+18145003 None:intergenic
AGAATTTGCTGGCAGTATGG+GGG 0.665675 5:-18145189 MsG0580025406.01.T01:five_prime_UTR
TGGTTTAGGAACTCGCGCCG+AGG 0.666052 5:-18139323 MsG0580025406.01.T01:three_prime_UTR
ATATTAGACCAATTCACATG+AGG 0.666171 5:+18141931 None:intergenic
TCTCTACAATGCATTGACAA+AGG 0.672617 5:-18144943 MsG0580025406.01.T01:intron
CAATCATTGAGGTAATGCAA+AGG 0.675874 5:+18145014 None:intergenic
AGAGGTCAAGATAAGCCGAA+AGG 0.679530 5:+18145215 None:intergenic
CTACATAGATCAAGCAACGG+TGG 0.692101 5:+18144575 None:intergenic
AAAAGCGGCAACTATCCAAG+TGG 0.707551 5:-18141962 MsG0580025406.01.T01:five_prime_UTR
ATACTACATAGATCAAGCAA+CGG 0.712799 5:+18144572 None:intergenic
ACGCACATACCAGATCACTT+GGG 0.716433 5:-18139789 MsG0580025406.01.T01:CDS
GCATGATGTATTATTCTACG+CGG 0.768264 5:-18139721 MsG0580025406.01.T01:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGAAAAAAAGAAAAAAAAA+AGG + Chr5:18144146-18144165 None:intergenic 10.0%
!! ACAAATTCAATAAAAATATA+AGG + Chr5:18143706-18143725 None:intergenic 10.0%
!! ATTATTATTAGTAGTTATAA+AGG - Chr5:18139752-18139771 MsG0580025406.01.T01:three_prime_UTR 10.0%
!!! AATTTTTGTTTTTGTTATAT+GGG - Chr5:18139627-18139646 MsG0580025406.01.T01:intron 10.0%
!!! TAATTTTTGTTTTTGTTATA+TGG - Chr5:18139626-18139645 MsG0580025406.01.T01:intron 10.0%
!!! TTTTACTTTAAAAAGTTTTT+AGG - Chr5:18140094-18140113 MsG0580025406.01.T01:intron 10.0%
!! AATTATACAAAAATCTGAAT+GGG + Chr5:18147749-18147768 None:intergenic 15.0%
!! ACATATTTGTTTATTTGAAT+TGG - Chr5:18140708-18140727 MsG0580025406.01.T01:five_prime_UTR 15.0%
!! GCATAAATCTATTATTATAA+GGG - Chr5:18141498-18141517 MsG0580025406.01.T01:five_prime_UTR 15.0%
!! TCATAATGTCTTAATTAAAA+AGG + Chr5:18147395-18147414 None:intergenic 15.0%
!! TGAAAAAAAAAATTGATGAA+TGG + Chr5:18145602-18145621 None:intergenic 15.0%
!! TTAAAAAAGAGAATTAGAAA+GGG + Chr5:18144172-18144191 None:intergenic 15.0%
!! TTATCATGTATATGTATAAA+TGG - Chr5:18141203-18141222 MsG0580025406.01.T01:intron 15.0%
!! TTTAAAAAAGAGAATTAGAA+AGG + Chr5:18144173-18144192 None:intergenic 15.0%
!! TTTGTATATTGTATATTGTT+GGG - Chr5:18140526-18140545 MsG0580025406.01.T01:intron 15.0%
!!! AAAGAAATTCATTATCTTTT+TGG - Chr5:18141898-18141917 MsG0580025406.01.T01:five_prime_UTR 15.0%
!!! AAATTATGTTGAAGTTATTT+TGG - Chr5:18142980-18142999 MsG0580025406.01.T01:intron 15.0%
!!! ATCAATTACTTTTTGAAAAA+GGG + Chr5:18142951-18142970 None:intergenic 15.0%
!!! ATTTTATTTTCATTTGTTGA+AGG - Chr5:18146177-18146196 MsG0580025406.01.T01:five_prime_UTR 15.0%
!!! TATCAATTACTTTTTGAAAA+AGG + Chr5:18142952-18142971 None:intergenic 15.0%
!!! TTTTAAATAAAGCTTAACAA+CGG - Chr5:18144230-18144249 MsG0580025406.01.T01:intron 15.0%
!!! TTTTGTATATTGTATATTGT+TGG - Chr5:18140525-18140544 MsG0580025406.01.T01:intron 15.0%
!! AAAAATAAGAATCAACAATG+AGG + Chr5:18142217-18142236 None:intergenic 20.0%
!! AAAAATTGATGAATGGTTAT+TGG + Chr5:18145595-18145614 None:intergenic 20.0%
!! AAAATAAGAATCAACAATGA+GGG + Chr5:18142216-18142235 None:intergenic 20.0%
!! AATTTAAACAAACCAGTATA+AGG + Chr5:18140613-18140632 None:intergenic 20.0%
!! ACACAGTTTCAAAATTATTT+CGG - Chr5:18145316-18145335 MsG0580025406.01.T01:intron 20.0%
!! ACATCATAGATGTATAAAAA+AGG + Chr5:18144456-18144475 None:intergenic 20.0%
!! AGTTAAGTAATAAAGATGTT+GGG - Chr5:18139811-18139830 MsG0580025406.01.T01:CDS 20.0%
!! ATATGCACACATTTAATTAT+AGG + Chr5:18144575-18144594 None:intergenic 20.0%
!! ATTATCAATGTGCATATATA+TGG + Chr5:18140048-18140067 None:intergenic 20.0%
!! ATTCGTAGTAAATTATAAGA+TGG - Chr5:18143229-18143248 MsG0580025406.01.T01:intron 20.0%
!! ATTTCAAGAATTACCTTAAA+TGG + Chr5:18139596-18139615 None:intergenic 20.0%
!! CAATTATACAAAAATCTGAA+TGG + Chr5:18147750-18147769 None:intergenic 20.0%
!! CATCATAGATGTATAAAAAA+GGG + Chr5:18144455-18144474 None:intergenic 20.0%
!! GAACTGAAAAAAATAAAAAG+AGG - Chr5:18141084-18141103 MsG0580025406.01.T01:intron 20.0%
!! GAATATAAAATACAATCTCA+CGG + Chr5:18141426-18141445 None:intergenic 20.0%
!! GGACATAATATTGTAAATAT+AGG - Chr5:18144737-18144756 MsG0580025406.01.T01:intron 20.0%
!! GGCATAAATCTATTATTATA+AGG - Chr5:18141497-18141516 MsG0580025406.01.T01:five_prime_UTR 20.0%
!! GTTTATTACTTTAATTGAAG+AGG + Chr5:18142606-18142625 None:intergenic 20.0%
!! TAAAAAAGAGAATTAGAAAG+GGG + Chr5:18144171-18144190 None:intergenic 20.0%
!! TAATAAACTAGCATACTTTA+AGG - Chr5:18142618-18142637 MsG0580025406.01.T01:intron 20.0%
!! TCTTATTCTCTTTAATGATA+GGG - Chr5:18146579-18146598 MsG0580025406.01.T01:intron 20.0%
!! TGAATTAGATATTCATGTTA+GGG - Chr5:18143928-18143947 MsG0580025406.01.T01:intron 20.0%
!! TGATAATATGATATACAGAA+AGG + Chr5:18141189-18141208 None:intergenic 20.0%
!! TGTAAAAATATGCAATTTAG+AGG - Chr5:18146399-18146418 MsG0580025406.01.T01:intron 20.0%
!! TTCTTATTCTCTTTAATGAT+AGG - Chr5:18146578-18146597 MsG0580025406.01.T01:intron 20.0%
!! TTTAAATAAAGCTTAACAAC+GGG - Chr5:18144231-18144250 MsG0580025406.01.T01:intron 20.0%
!!! AAAGGCTTCAAATTTAAAAT+TGG + Chr5:18144128-18144147 None:intergenic 20.0%
!!! ACAGAAAATTCTTTTAAATG+AGG + Chr5:18141641-18141660 None:intergenic 20.0%
!!! ACATAGCATTTTAAAACAAA+AGG + Chr5:18146482-18146501 None:intergenic 20.0%
!!! AGTTCTCATAAAATCAATTT+TGG + Chr5:18143840-18143859 None:intergenic 20.0%
!!! ATTTAAGGTAATTCTTGAAA+TGG - Chr5:18139595-18139614 MsG0580025406.01.T01:intron 20.0%
!!! ATTTCTTTTGAAAAAGAAGA+GGG - Chr5:18147614-18147633 MsG0580025406.01.T01:five_prime_UTR 20.0%
!!! ATTTTACATCTAAAATCTGA+AGG - Chr5:18144273-18144292 MsG0580025406.01.T01:intron 20.0%
!!! ATTTTTTCCTCTAAATAACA+CGG - Chr5:18142231-18142250 MsG0580025406.01.T01:intron 20.0%
!!! CACAGTTTTCAAAATTATTT+CGG - Chr5:18145485-18145504 MsG0580025406.01.T01:intron 20.0%
!!! CATAGCATTTTAAAACAAAA+GGG + Chr5:18146481-18146500 None:intergenic 20.0%
!!! CATTCAGATTTTTGTATAAT+TGG - Chr5:18147748-18147767 MsG0580025406.01.T01:five_prime_UTR 20.0%
!!! TAAATTCAATGTCACTTTAA+AGG + Chr5:18142779-18142798 None:intergenic 20.0%
!!! TATTTTATCACGAAACATTT+GGG - Chr5:18144716-18144735 MsG0580025406.01.T01:intron 20.0%
!!! TCAATTACTTTTTGAAAAAG+GGG + Chr5:18142950-18142969 None:intergenic 20.0%
!!! TCGAAAATGATTTTTATGAA+AGG - Chr5:18143993-18144012 MsG0580025406.01.T01:intron 20.0%
!!! TGTTTTTATATTATAGTCTC+TGG - Chr5:18143534-18143553 MsG0580025406.01.T01:intron 20.0%
!!! TTATACTGGTTTGTTTAAAT+TGG - Chr5:18140612-18140631 MsG0580025406.01.T01:intron 20.0%
!!! TTTAAGGTAATTCTTGAAAT+GGG - Chr5:18139596-18139615 MsG0580025406.01.T01:intron 20.0%
!!! TTTTACATCTAAAATCTGAA+GGG - Chr5:18144274-18144293 MsG0580025406.01.T01:intron 20.0%
!!! TTTTTACATTCAAACAAGAT+AGG + Chr5:18146387-18146406 None:intergenic 20.0%
!!! TTTTTTGAAAAACTAGTATC+CGG + Chr5:18139970-18139989 None:intergenic 20.0%
! AAAAAGTCATAGCAAAATGA+TGG - Chr5:18144066-18144085 MsG0580025406.01.T01:intron 25.0%
! AAATGAGTAAAGAAAGACTT+CGG - Chr5:18146432-18146451 MsG0580025406.01.T01:intron 25.0%
! AACACTTACAATTTAGTACT+AGG + Chr5:18145570-18145589 None:intergenic 25.0%
! AACTAGAAAGATTTCAGTTT+AGG - Chr5:18140984-18141003 MsG0580025406.01.T01:intron 25.0%
! ACTTCAGATATGAATTCTAA+AGG + Chr5:18142119-18142138 None:intergenic 25.0%
! ACTTTAATCCAAATGACAAA+AGG + Chr5:18147793-18147812 None:intergenic 25.0%
! ATAATGACTTCAGAAGAATA+AGG + Chr5:18143770-18143789 None:intergenic 25.0%
! ATACAATACACAAAAATGGT+GGG - Chr5:18144382-18144401 MsG0580025406.01.T01:intron 25.0%
! ATATGTACAGAAAAAGAACA+AGG + Chr5:18147262-18147281 None:intergenic 25.0%
! ATCATAATTCTCAAGTAATC+AGG + Chr5:18143287-18143306 None:intergenic 25.0%
! ATGATGAAACAATCAAAAAG+AGG + Chr5:18145754-18145773 None:intergenic 25.0%
! ATTGTAATTGTGAAACATTG+AGG - Chr5:18140132-18140151 MsG0580025406.01.T01:intron 25.0%
! ATTTGTTTATTTGAATTGGC+TGG - Chr5:18140712-18140731 MsG0580025406.01.T01:five_prime_UTR 25.0%
! CATTTGGATTAAAGTCATTA+AGG - Chr5:18147798-18147817 MsG0580025406.01.T01:five_prime_UTR 25.0%
! CTTATTGTTCTTGCTTATTT+GGG - Chr5:18139671-18139690 MsG0580025406.01.T01:intron 25.0%
! CTTGTTGAATTGAAAATTCT+AGG - Chr5:18145959-18145978 MsG0580025406.01.T01:intron 25.0%
! GAATAAAAAAAACCATGAGA+AGG + Chr5:18141448-18141467 None:intergenic 25.0%
! GAGTTAAGTAATAAAGATGT+TGG - Chr5:18139810-18139829 MsG0580025406.01.T01:CDS 25.0%
! GATTGGACTAAAAATTTGAA+TGG - Chr5:18143029-18143048 MsG0580025406.01.T01:intron 25.0%
! GTGAATTAGATATTCATGTT+AGG - Chr5:18143927-18143946 MsG0580025406.01.T01:intron 25.0%
! GTTTATGTCATTGTAATTTC+AGG - Chr5:18146631-18146650 MsG0580025406.01.T01:intron 25.0%
! TACTGTATCTACAAAGTTTA+AGG + Chr5:18143154-18143173 None:intergenic 25.0%
! TATGTACAGAAAAAGAACAA+GGG + Chr5:18147261-18147280 None:intergenic 25.0%
! TCAAAGATTATCAAGTGTAT+TGG - Chr5:18139998-18140017 MsG0580025406.01.T01:CDS 25.0%
! TCTTATTGTTCTTGCTTATT+TGG - Chr5:18139670-18139689 MsG0580025406.01.T01:intron 25.0%
! TTAAATAAAGCTTAACAACG+GGG - Chr5:18144232-18144251 MsG0580025406.01.T01:intron 25.0%
! TTAAATTGTAACCTTGAGAA+TGG + Chr5:18143740-18143759 None:intergenic 25.0%
! TTTATCATCAGAATCGAAAA+GGG + Chr5:18139558-18139577 None:intergenic 25.0%
!! AAAATTTGAGCAAAAGCATA+TGG - Chr5:18143385-18143404 MsG0580025406.01.T01:five_prime_UTR 25.0%
!! AAATTTGAGCAAAAGCATAT+GGG - Chr5:18143386-18143405 MsG0580025406.01.T01:five_prime_UTR 25.0%
!! AATTCTTTTAAATGAGGAAG+AGG + Chr5:18141635-18141654 None:intergenic 25.0%
!! AGGTTTTTATTCTATAGCTT+GGG - Chr5:18141359-18141378 MsG0580025406.01.T01:intron 25.0%
!! AGTTTCGTTACTATAGTTTT+AGG - Chr5:18147552-18147571 MsG0580025406.01.T01:five_prime_UTR 25.0%
!! ATGAATTTCTTTTTGACAAC+TGG + Chr5:18141890-18141909 None:intergenic 25.0%
!! ATGAGTTGAGAATATTGTAT+AGG - Chr5:18143069-18143088 MsG0580025406.01.T01:intron 25.0%
!! ATTCTTTTAAATGAGGAAGA+GGG + Chr5:18141634-18141653 None:intergenic 25.0%
!! GTATTTTATATTCCTTCTCA+TGG - Chr5:18141433-18141452 MsG0580025406.01.T01:intron 25.0%
!! GTATTTTATCACGAAACATT+TGG - Chr5:18144715-18144734 MsG0580025406.01.T01:intron 25.0%
!! TAATGATTCCTTTTGTCATT+TGG - Chr5:18147782-18147801 MsG0580025406.01.T01:five_prime_UTR 25.0%
!!! AAATTTTGAAGACATCCTTT+AGG - Chr5:18146289-18146308 MsG0580025406.01.T01:intron 25.0%
!!! AATGTTTTGAATTTCTACGA+AGG + Chr5:18143127-18143146 None:intergenic 25.0%
!!! ATTTTTAGTCCAATCAGTTA+AGG + Chr5:18143024-18143043 None:intergenic 25.0%
!!! CATATTTTTACCTTCTACAT+AGG - Chr5:18143560-18143579 MsG0580025406.01.T01:intron 25.0%
!!! CATTATACGAGCTTTTTTAA+AGG + Chr5:18145898-18145917 None:intergenic 25.0%
!!! CATTTCTTTTGAAAAAGAAG+AGG - Chr5:18147613-18147632 MsG0580025406.01.T01:five_prime_UTR 25.0%
!!! CTTTTAAATTAGGTTGAGTA+AGG - Chr5:18140320-18140339 MsG0580025406.01.T01:five_prime_UTR 25.0%
!!! TATTCTTCTGAAGTCATTAT+GGG - Chr5:18143770-18143789 MsG0580025406.01.T01:intron 25.0%
!!! TCATTTTGCTATGACTTTTT+TGG + Chr5:18144066-18144085 None:intergenic 25.0%
!!! TTATTCTTCTGAAGTCATTA+TGG - Chr5:18143769-18143788 MsG0580025406.01.T01:intron 25.0%
AAACTTTAAACAGACTGAAG+TGG + Chr5:18146615-18146634 None:intergenic 30.0%
AATTTAAAAGTCCATGCATG+TGG + Chr5:18140310-18140329 None:intergenic 30.0%
ACGTAACAAAAACATGTCAA+GGG + Chr5:18141686-18141705 None:intergenic 30.0%
AGACAACTGCTAAAGATAAA+GGG - Chr5:18141714-18141733 MsG0580025406.01.T01:intron 30.0%
ATAAAGTATATGGAGGTTCA+AGG + Chr5:18146002-18146021 None:intergenic 30.0%
ATACTACATAGATCAAGCAA+CGG + Chr5:18142436-18142455 None:intergenic 30.0%
ATATTAGACCAATTCACATG+AGG + Chr5:18145077-18145096 None:intergenic 30.0%
ATTATTATAAGGGACCATAG+TGG - Chr5:18141508-18141527 MsG0580025406.01.T01:five_prime_UTR 30.0%
ATTGTACAACTGTTATCTGT+GGG - Chr5:18142523-18142542 MsG0580025406.01.T01:intron 30.0%
ATTGTTGGGAATATCATGTT+TGG - Chr5:18140540-18140559 MsG0580025406.01.T01:intron 30.0%
ATTTAAAAGTCCATGCATGT+GGG + Chr5:18140309-18140328 None:intergenic 30.0%
CATACAATACACAAAAATGG+TGG - Chr5:18144381-18144400 MsG0580025406.01.T01:intron 30.0%
CATTGAATTTGAGCCATTTA+AGG - Chr5:18139580-18139599 MsG0580025406.01.T01:intron 30.0%
CTCTACTAATCTAAATGCTA+TGG - Chr5:18141291-18141310 MsG0580025406.01.T01:intron 30.0%
CTCTGTGTAAAAATTGTGTA+AGG - Chr5:18144355-18144374 MsG0580025406.01.T01:intron 30.0%
CTGCATACAATACACAAAAA+TGG - Chr5:18144378-18144397 MsG0580025406.01.T01:intron 30.0%
CTTACATATCTTAAATGCTG+TGG - Chr5:18141038-18141057 MsG0580025406.01.T01:intron 30.0%
CTTAGAAAAGCAAATCATGA+TGG + Chr5:18145167-18145186 None:intergenic 30.0%
CTTGGTTCAATTGAAATGAA+AGG + Chr5:18145654-18145673 None:intergenic 30.0%
CTTTATCATCAGAATCGAAA+AGG + Chr5:18139559-18139578 None:intergenic 30.0%
GCACATGAAAGTTTACATAT+TGG - Chr5:18143465-18143484 MsG0580025406.01.T01:intron 30.0%
GGAAAATATACACCAATTCA+TGG + Chr5:18142098-18142117 None:intergenic 30.0%
GTAACACATCAACATAGAAA+AGG + Chr5:18140228-18140247 None:intergenic 30.0%
GTATTCAAGCAAATTTCTCA+TGG + Chr5:18145451-18145470 None:intergenic 30.0%
GTCTTCAAAATTTCGAAATC+TGG + Chr5:18146282-18146301 None:intergenic 30.0%
GTTTAATCGATGTAATCTTG+TGG - Chr5:18140071-18140090 MsG0580025406.01.T01:intron 30.0%
TAAGCACTTCATTTCAAACT+CGG + Chr5:18140423-18140442 None:intergenic 30.0%
TAATAAAGATGTTGGGACTT+AGG - Chr5:18139818-18139837 MsG0580025406.01.T01:CDS 30.0%
TACACAGAAATAACTGTATG+TGG + Chr5:18144698-18144717 None:intergenic 30.0%
TAGACAACCTTGTTACAATT+GGG - Chr5:18141254-18141273 MsG0580025406.01.T01:intron 30.0%
TATGTAAACTTTCATGTGCA+TGG + Chr5:18143464-18143483 None:intergenic 30.0%
TATTCAGCAAATTTCCTCAT+GGG + Chr5:18145282-18145301 None:intergenic 30.0%
TCAACTTATCCTTAACTGAT+TGG - Chr5:18143012-18143031 MsG0580025406.01.T01:intron 30.0%
TCATTGATGGAATTTGCATT+GGG - Chr5:18144948-18144967 MsG0580025406.01.T01:five_prime_UTR 30.0%
TCGGAAAAGGATTTCAAAAA+AGG - Chr5:18143641-18143660 MsG0580025406.01.T01:intron 30.0%
TCTCAAGACCATAAAGTATA+TGG + Chr5:18146012-18146031 None:intergenic 30.0%
TCTTGCTTATTTGGGAAAAT+TGG - Chr5:18139679-18139698 MsG0580025406.01.T01:three_prime_UTR 30.0%
TGAAGAGCTTACATCTAAAA+TGG + Chr5:18141965-18141984 None:intergenic 30.0%
TGATAGCCAATCTACATTAA+CGG - Chr5:18142692-18142711 MsG0580025406.01.T01:intron 30.0%
TGCTTGCTTATAATAATACG+AGG - Chr5:18144603-18144622 MsG0580025406.01.T01:five_prime_UTR 30.0%
TGTCTATCTTTCATTAGATG+TGG - Chr5:18146322-18146341 MsG0580025406.01.T01:intron 30.0%
TTAATTGAAGAGGAAGAAGT+GGG + Chr5:18142596-18142615 None:intergenic 30.0%
TTATTATAGTAATGCCCATG+AGG - Chr5:18145265-18145284 MsG0580025406.01.T01:five_prime_UTR 30.0%
TTCAAAACAGATTGTGAATC+TGG - Chr5:18140668-18140687 MsG0580025406.01.T01:intron 30.0%
TTGAACCTCCATATACTTTA+TGG - Chr5:18146001-18146020 MsG0580025406.01.T01:intron 30.0%
TTTAACAGAAAAGAGGGTAA+TGG - Chr5:18147056-18147075 MsG0580025406.01.T01:intron 30.0%
TTTAATTGAAGAGGAAGAAG+TGG + Chr5:18142597-18142616 None:intergenic 30.0%
TTTCAATTCAACAAGCATCA+TGG + Chr5:18145954-18145973 None:intergenic 30.0%
TTTCATTAGATGTGGTTTAC+TGG - Chr5:18146330-18146349 MsG0580025406.01.T01:intron 30.0%
! AAAAGCATATGGGTGAATAT+TGG - Chr5:18143396-18143415 MsG0580025406.01.T01:five_prime_UTR 30.0%
! AGAGGGATTTCTATCATTTT+TGG - Chr5:18147631-18147650 MsG0580025406.01.T01:five_prime_UTR 30.0%
! AGAGTATCTAATATGTAACC+AGG + Chr5:18142298-18142317 None:intergenic 30.0%
! CATGCATGGACTTTTAAATT+AGG - Chr5:18140310-18140329 MsG0580025406.01.T01:five_prime_UTR 30.0%
! CTTACACAATTTTTACACAG+AGG + Chr5:18144357-18144376 None:intergenic 30.0%
! GAAGAGCTTACATCTAAAAT+GGG + Chr5:18141964-18141983 None:intergenic 30.0%
! GAGGTTTTTATTCTATAGCT+TGG - Chr5:18141358-18141377 MsG0580025406.01.T01:intron 30.0%
! GGTTTTTATTCTATAGCTTG+GGG - Chr5:18141360-18141379 MsG0580025406.01.T01:intron 30.0%
! GTCTTTTCTGTTCAAATGTT+TGG - Chr5:18145227-18145246 MsG0580025406.01.T01:five_prime_UTR 30.0%
! TATACTTTATGGTCTTGAGA+TGG - Chr5:18146012-18146031 MsG0580025406.01.T01:intron 30.0%
! TGAGAAATTTGCTTGAATAC+AGG - Chr5:18145451-18145470 MsG0580025406.01.T01:five_prime_UTR 30.0%
! TTGCATATTTCTGATCCAAT+GGG - Chr5:18142138-18142157 MsG0580025406.01.T01:intron 30.0%
! TTTTCTGTTTGCTTCTAACA+CGG - Chr5:18141653-18141672 MsG0580025406.01.T01:intron 30.0%
! TTTTGATGTTGTCAAAGTCT+TGG + Chr5:18145672-18145691 None:intergenic 30.0%
!! AGTCACATATTCTAAAATGC+AGG + Chr5:18145779-18145798 None:intergenic 30.0%
!! CATACACTTCAAATTTTGAC+TGG - Chr5:18147662-18147681 MsG0580025406.01.T01:five_prime_UTR 30.0%
!! CTTACATCTAAAATGGGTTT+TGG + Chr5:18141958-18141977 None:intergenic 30.0%
!! GGATTTCTATCATTTTTGGA+AGG - Chr5:18147635-18147654 MsG0580025406.01.T01:five_prime_UTR 30.0%
!! GTTTACTGGTAAGTTTGTTA+AGG - Chr5:18146344-18146363 MsG0580025406.01.T01:five_prime_UTR 30.0%
!! TGAAATTTTGAAGAGGCTTT+AGG + Chr5:18141564-18141583 None:intergenic 30.0%
!! TGTTTAAATTGGTTGATAGC+AGG - Chr5:18140623-18140642 MsG0580025406.01.T01:intron 30.0%
!! TTTCTAGTTTGCTAATTCTG+AGG + Chr5:18140973-18140992 None:intergenic 30.0%
!!! ACCTGGTTTTGAAATCTTTA+TGG - Chr5:18146712-18146731 MsG0580025406.01.T01:intron 30.0%
!!! CCTGGTTTTGAAATCTTTAT+GGG - Chr5:18146713-18146732 MsG0580025406.01.T01:intron 30.0%
!!! CTTCAAATTTTGACTGGTTT+AGG - Chr5:18147668-18147687 MsG0580025406.01.T01:five_prime_UTR 30.0%
!!! TATACGAGCTTTTTTAAAGG+TGG + Chr5:18145895-18145914 None:intergenic 30.0%
!!! TCCACTTTGAAATTTTGAAG+AGG + Chr5:18141571-18141590 None:intergenic 30.0%
AAAAAGCAGACCTCATCATT+TGG - Chr5:18145695-18145714 MsG0580025406.01.T01:intron 35.0%
AAAAGAACAAGGGAATTGGA+AGG + Chr5:18147251-18147270 None:intergenic 35.0%
AAAAGCAGACCTCATCATTT+GGG - Chr5:18145696-18145715 MsG0580025406.01.T01:intron 35.0%
AACAGTTGTACAATCTTGCA+AGG + Chr5:18142517-18142536 None:intergenic 35.0%
AAGAAGAAGAAGGGTTTGTA+GGG + Chr5:18139421-18139440 None:intergenic 35.0%
AAGAAGTAGTGTACTTTGAG+AGG - Chr5:18145184-18145203 MsG0580025406.01.T01:five_prime_UTR 35.0%
AATAAAAACCTCTCAGCTGA+TGG + Chr5:18141350-18141369 None:intergenic 35.0%
AATCAACAATGAGGGATTGA+AGG + Chr5:18142208-18142227 None:intergenic 35.0%
ACAAAAGCAACCTATGTAGA+AGG + Chr5:18143573-18143592 None:intergenic 35.0%
ACAAACCAGTATAAGGATTG+TGG + Chr5:18140606-18140625 None:intergenic 35.0%
ACGCGATTTAACAGAAAAGA+GGG - Chr5:18147050-18147069 MsG0580025406.01.T01:intron 35.0%
ACGGCGTAAAAATCTTGAAT+GGG - Chr5:18142250-18142269 MsG0580025406.01.T01:intron 35.0%
AGAAATGCTAAGCAGAAAAG+CGG - Chr5:18145028-18145047 MsG0580025406.01.T01:five_prime_UTR 35.0%
AGCTCATGAAACAGATGTAT+TGG - Chr5:18142396-18142415 MsG0580025406.01.T01:intron 35.0%
ATAAAAACCTCTCAGCTGAT+GGG + Chr5:18141349-18141368 None:intergenic 35.0%
ATAACGATGGCAGAATATGA+TGG + Chr5:18147030-18147049 None:intergenic 35.0%
ATCAAGTGTATTGGAAGTTG+AGG - Chr5:18140007-18140026 MsG0580025406.01.T01:CDS 35.0%
ATGATATCTTAGGCGATGAA+TGG - Chr5:18139327-18139346 MsG0580025406.01.T01:three_prime_UTR 35.0%
ATGATGGTTAGAGAATGAAG+TGG + Chr5:18139450-18139469 None:intergenic 35.0%
ATGCAAAAACACACTTGGTA+TGG + Chr5:18142666-18142685 None:intergenic 35.0%
ATTCAGGACATTTCTTATGC+GGG - Chr5:18146969-18146988 MsG0580025406.01.T01:intron 35.0%
ATTCTCAGAAGACACGAATT+TGG + Chr5:18140861-18140880 None:intergenic 35.0%
ATTGAGCTTCTGTTAGTTGA+CGG - Chr5:18139910-18139929 MsG0580025406.01.T01:CDS 35.0%
ATTTGCATGCTTTCAGGAAA+AGG - Chr5:18140790-18140809 MsG0580025406.01.T01:five_prime_UTR 35.0%
CAAACCAGTATAAGGATTGT+GGG + Chr5:18140605-18140624 None:intergenic 35.0%
CAACTTATTTGCATGCTTTC+AGG - Chr5:18140784-18140803 MsG0580025406.01.T01:five_prime_UTR 35.0%
CAAGACCATAAAGTATATGG+AGG + Chr5:18146009-18146028 None:intergenic 35.0%
CAATCATTGAGGTAATGCAA+AGG + Chr5:18141994-18142013 None:intergenic 35.0%
CACGTAACAAAAACATGTCA+AGG + Chr5:18141687-18141706 None:intergenic 35.0%
CACTTCTAAGTTATTCCTCA+TGG + Chr5:18141390-18141409 None:intergenic 35.0%
CAGAAAAAGAACAAGGGAAT+TGG + Chr5:18147255-18147274 None:intergenic 35.0%
CAGAAATGCAAAAACACACT+TGG + Chr5:18142671-18142690 None:intergenic 35.0%
CATTCAGGACATTTCTTATG+CGG - Chr5:18146968-18146987 MsG0580025406.01.T01:intron 35.0%
CCCATAAAGATTTCAAAACC+AGG + Chr5:18146716-18146735 None:intergenic 35.0%
CTATGGTTCAGCTGAAATAA+AGG - Chr5:18141308-18141327 MsG0580025406.01.T01:intron 35.0%
CTCAAGTTAAAGAAAGACAG+AGG - Chr5:18140818-18140837 MsG0580025406.01.T01:intron 35.0%
CTGCAAAACATACCATTAAC+TGG + Chr5:18142374-18142393 None:intergenic 35.0%
GACAACAACGATGATATCTT+AGG - Chr5:18139317-18139336 MsG0580025406.01.T01:three_prime_UTR 35.0%
GACAACTGCTAAAGATAAAG+GGG - Chr5:18141715-18141734 MsG0580025406.01.T01:intron 35.0%
GACTTAAAGCTGCAAGATAT+AGG + Chr5:18141013-18141032 None:intergenic 35.0%
GAGACAACTGCTAAAGATAA+AGG - Chr5:18141713-18141732 MsG0580025406.01.T01:intron 35.0%
GAGTATGGAAACAATCATTG+AGG + Chr5:18142005-18142024 None:intergenic 35.0%
GATTGTACAACTGTTATCTG+TGG - Chr5:18142522-18142541 MsG0580025406.01.T01:intron 35.0%
GCACTATAAAAGAAACTCGA+AGG + Chr5:18141110-18141129 None:intergenic 35.0%
GCATGATGTATTATTCTACG+CGG - Chr5:18147284-18147303 MsG0580025406.01.T01:intron 35.0%
GCATGCAAATAAGTTGTAAG+AGG + Chr5:18140780-18140799 None:intergenic 35.0%
GCCTCTTCAAAATTTCAAAG+TGG - Chr5:18141567-18141586 MsG0580025406.01.T01:intron 35.0%
GGAGTTGAAAATAAGCAGAA+AGG - Chr5:18146652-18146671 MsG0580025406.01.T01:intron 35.0%
GGGCTTAAATGTCTTAAATG+AGG + Chr5:18142930-18142949 None:intergenic 35.0%
GGTATTAGTTCACCATGAAT+TGG - Chr5:18142083-18142102 MsG0580025406.01.T01:five_prime_UTR 35.0%
GGTTCAATTGAAATGAAAGG+TGG + Chr5:18145651-18145670 None:intergenic 35.0%
GTAGACAACCTTGTTACAAT+TGG - Chr5:18141253-18141272 MsG0580025406.01.T01:intron 35.0%
GTATAATGAGTAGTAGATCG+TGG - Chr5:18145910-18145929 MsG0580025406.01.T01:intron 35.0%
GTATATGTATAAATGGCCAG+TGG - Chr5:18141210-18141229 MsG0580025406.01.T01:intron 35.0%
GTATTCAGCAAATTTCCTCA+TGG + Chr5:18145283-18145302 None:intergenic 35.0%
GTCATTGATGGAATTTGCAT+TGG - Chr5:18144947-18144966 MsG0580025406.01.T01:five_prime_UTR 35.0%
GTTGCAAATGATCCAGTTAA+TGG - Chr5:18142359-18142378 MsG0580025406.01.T01:intron 35.0%
GTTGCTTGATCTATGTAGTA+TGG - Chr5:18142435-18142454 MsG0580025406.01.T01:intron 35.0%
TAATTAGTTCAGTTCTTGCC+CGG - Chr5:18145866-18145885 MsG0580025406.01.T01:intron 35.0%
TAATTGAAGAGGAAGAAGTG+GGG + Chr5:18142595-18142614 None:intergenic 35.0%
TACAATTGGGTCTTGACAAA+TGG - Chr5:18141267-18141286 MsG0580025406.01.T01:intron 35.0%
TACCTCTCCCTAAAAATTTC+TGG + Chr5:18146839-18146858 None:intergenic 35.0%
TACGCGATTTAACAGAAAAG+AGG - Chr5:18147049-18147068 MsG0580025406.01.T01:intron 35.0%
TATAAGGATTGTGGGATTCA+AGG + Chr5:18140597-18140616 None:intergenic 35.0%
TATTCTTGAATTGGCAAGCA+AGG + Chr5:18147188-18147207 None:intergenic 35.0%
TATTTCGGAATTGCTCAAGA+AGG - Chr5:18145331-18145350 MsG0580025406.01.T01:intron 35.0%
TCAAGTGTATTGGAAGTTGA+GGG - Chr5:18140008-18140027 MsG0580025406.01.T01:CDS 35.0%
TCATAGCCGTTAATGTAGAT+TGG + Chr5:18142701-18142720 None:intergenic 35.0%
TCGTGATCTTCATGGAAATT+TGG + Chr5:18145115-18145134 None:intergenic 35.0%
TCTCTACCCTATTCTTGAAT+TGG + Chr5:18147197-18147216 None:intergenic 35.0%
TGATATCTTAGGCGATGAAT+GGG - Chr5:18139328-18139347 MsG0580025406.01.T01:three_prime_UTR 35.0%
TGCTTGCCAATTCAAGAATA+GGG - Chr5:18147188-18147207 MsG0580025406.01.T01:intron 35.0%
TGTTAAATCGCGTATAACGA+TGG + Chr5:18147043-18147062 None:intergenic 35.0%
TGTTGAAGGTCCAAAACTAT+TGG - Chr5:18146191-18146210 MsG0580025406.01.T01:five_prime_UTR 35.0%
TTATTGCAATAGAGAGCCTA+TGG + Chr5:18146739-18146758 None:intergenic 35.0%
TTCTCAGAAGACACGAATTT+GGG + Chr5:18140860-18140879 None:intergenic 35.0%
TTGAAATCTTTATGGGCCAT+AGG - Chr5:18146720-18146739 MsG0580025406.01.T01:intron 35.0%
TTGACAACTGGCAAACAATT+TGG + Chr5:18141878-18141897 None:intergenic 35.0%
TTGCTTGCCAATTCAAGAAT+AGG - Chr5:18147187-18147206 MsG0580025406.01.T01:intron 35.0%
TTGTATGAGTACACTGTGTT+TGG + Chr5:18145843-18145862 None:intergenic 35.0%
TTGTTCAATCATGTTAGTCG+AGG - Chr5:18142337-18142356 MsG0580025406.01.T01:intron 35.0%
TTTAGACTGTCATTCTTAGC+TGG - Chr5:18146040-18146059 MsG0580025406.01.T01:intron 35.0%
TTTATTCTATAGCTTGGGGT+TGG - Chr5:18141364-18141383 MsG0580025406.01.T01:intron 35.0%
TTTCTTCTTCGTGATCTTCA+TGG + Chr5:18145123-18145142 None:intergenic 35.0%
! AAGGACCTTTTGGATTTTGA+CGG - Chr5:18144971-18144990 MsG0580025406.01.T01:five_prime_UTR 35.0%
! AATGGCTACTTTGACATTTG+AGG - Chr5:18147074-18147093 MsG0580025406.01.T01:intron 35.0%
! AGAAGTAGTGTACTTTGAGA+GGG - Chr5:18145185-18145204 MsG0580025406.01.T01:five_prime_UTR 35.0%
! AGCTGCAACAATCGATATTT+TGG + Chr5:18142904-18142923 None:intergenic 35.0%
! ATGAGCTGCCAGAAATTTTT+AGG - Chr5:18146828-18146847 MsG0580025406.01.T01:intron 35.0%
! CTTGTCTGAGTTTGATAACT+AGG - Chr5:18144527-18144546 MsG0580025406.01.T01:intron 35.0%
! GTTGCATATTTCTGATCCAA+TGG - Chr5:18142137-18142156 MsG0580025406.01.T01:intron 35.0%
! GTTGTTGTTGGAATTGATGA+TGG + Chr5:18139466-18139485 None:intergenic 35.0%
! TAGTGTATTTCTGCATGTGT+TGG - Chr5:18140359-18140378 MsG0580025406.01.T01:intron 35.0%
! TATCTTCCCAAACACAGTTT+TGG - Chr5:18147510-18147529 MsG0580025406.01.T01:five_prime_UTR 35.0%
! TCTCTACAATGCATTGACAA+AGG - Chr5:18142062-18142081 MsG0580025406.01.T01:five_prime_UTR 35.0%
! TGAGCTGCCAGAAATTTTTA+GGG - Chr5:18146829-18146848 MsG0580025406.01.T01:intron 35.0%
! TGCATATTTCTGATCCAATG+GGG - Chr5:18142139-18142158 MsG0580025406.01.T01:intron 35.0%
! TGTAAAGTTTTCTGCATGTC+TGG - Chr5:18140486-18140505 MsG0580025406.01.T01:intron 35.0%
!! AAGTTTGTTAAGGCTTCGTT+TGG - Chr5:18146354-18146373 MsG0580025406.01.T01:five_prime_UTR 35.0%
!! AGATACTCTTGTTATTGAGC+TGG - Chr5:18142309-18142328 MsG0580025406.01.T01:intron 35.0%
!! CAAGTGTGTTTTTGCATTTC+TGG - Chr5:18142669-18142688 MsG0580025406.01.T01:intron 35.0%
!! CTAGTCTCTAAGATTGAGTT+TGG - Chr5:18143195-18143214 MsG0580025406.01.T01:intron 35.0%
!! CTCTGTCTTTCTTTAACTTG+AGG + Chr5:18140820-18140839 None:intergenic 35.0%
!! CTTCGAAGCATTTTGTTACT+TGG + Chr5:18141845-18141864 None:intergenic 35.0%
!! GATACTCTTGTTATTGAGCT+GGG - Chr5:18142310-18142329 MsG0580025406.01.T01:intron 35.0%
!! TGAGGAAATTTGCTGAATAC+AGG - Chr5:18145283-18145302 MsG0580025406.01.T01:five_prime_UTR 35.0%
!! TTGAAGACATCCTTTAGGAT+TGG - Chr5:18146294-18146313 MsG0580025406.01.T01:intron 35.0%
!! TTGTTTTGTTGCACTACATG+TGG - Chr5:18141476-18141495 MsG0580025406.01.T01:five_prime_UTR 35.0%
!!! ATCTGTTTTGAAGCATGTCT+TGG + Chr5:18140660-18140679 None:intergenic 35.0%
!!! ATTTTGAAGAGGCTTTAGGA+TGG + Chr5:18141560-18141579 None:intergenic 35.0%
!!! GGTTTTGGTGTTATTTCAGA+AGG + Chr5:18141943-18141962 None:intergenic 35.0%
!!! TTTTACGCCGTGTTATTTAG+AGG + Chr5:18142241-18142260 None:intergenic 35.0%
AACCTAAGTAGTCGAATCCA+AGG - Chr5:18139249-18139268 MsG0580025406.01.T01:three_prime_UTR 40.0%
AACTAGAGCAAAGCCATATG+TGG + Chr5:18139888-18139907 None:intergenic 40.0%
AATTGAAGAGGAAGAAGTGG+GGG + Chr5:18142594-18142613 None:intergenic 40.0%
AATTGCTCAAGAAGGATGCT+GGG - Chr5:18145508-18145527 MsG0580025406.01.T01:intron 40.0%
ACAATGACAGACTAATCAGG+GGG + Chr5:18139946-18139965 None:intergenic 40.0%
ACTTGGTATGGCGAAATGAA+AGG + Chr5:18142654-18142673 None:intergenic 40.0%
AGACAATCAGCCAATCCTAA+AGG + Chr5:18146307-18146326 None:intergenic 40.0%
AGTCAGTGAAATGCTAGCAA+TGG - Chr5:18140750-18140769 MsG0580025406.01.T01:five_prime_UTR 40.0%
ATGGCCAGTGGTAAAAGTAA+CGG - Chr5:18141222-18141241 MsG0580025406.01.T01:intron 40.0%
ATGTGTGTACATGCACACAT+GGG - Chr5:18142743-18142762 MsG0580025406.01.T01:intron 40.0%
ATTTCCTTTCCGAGACAAGT+TGG + Chr5:18147106-18147125 None:intergenic 40.0%
CAATGGTAAAGTTGTGTCAC+GGG - Chr5:18144312-18144331 MsG0580025406.01.T01:intron 40.0%
CAATTGAAATGAAAGGTGGC+AGG + Chr5:18145647-18145666 None:intergenic 40.0%
CACAATGACAGACTAATCAG+GGG + Chr5:18139947-18139966 None:intergenic 40.0%
CACGGCGTAAAAATCTTGAA+TGG - Chr5:18142249-18142268 MsG0580025406.01.T01:intron 40.0%
CAGATAGGCATGTTAGTGTT+GGG - Chr5:18147335-18147354 MsG0580025406.01.T01:intron 40.0%
CAGTAGCTACTTGTTCTCAA+GGG - Chr5:18142567-18142586 MsG0580025406.01.T01:intron 40.0%
CATCCTGAACAATTGCATTC+AGG - Chr5:18146953-18146972 MsG0580025406.01.T01:intron 40.0%
CCAATTCACATGAGGTTGTA+AGG + Chr5:18145069-18145088 None:intergenic 40.0%
CCTTACAACCTCATGTGAAT+TGG - Chr5:18145066-18145085 MsG0580025406.01.T01:five_prime_UTR 40.0%
CGACTTCCAAAACTGTGTTT+GGG + Chr5:18147519-18147538 None:intergenic 40.0%
CTAAATGGTGAGAAGCAGAT+AGG - Chr5:18147320-18147339 MsG0580025406.01.T01:intron 40.0%
CTATCTGCTTCTCACCATTT+AGG + Chr5:18147322-18147341 None:intergenic 40.0%
GAAAAGCAATCAGACTCACT+CGG + Chr5:18142276-18142295 None:intergenic 40.0%
GAAATGATGAGGGATGAAGA+TGG - Chr5:18140202-18140221 MsG0580025406.01.T01:CDS 40.0%
GAAGAAGAAGAAGGGTTTGT+AGG + Chr5:18139422-18139441 None:intergenic 40.0%
GAAGTTGAGGGTAAACATAG+AGG - Chr5:18140020-18140039 MsG0580025406.01.T01:CDS 40.0%
GAATCCCACAATCCTTATAC+TGG - Chr5:18140598-18140617 MsG0580025406.01.T01:intron 40.0%
GAGAAACCACCAGAAACAAA+CGG + Chr5:18139500-18139519 None:intergenic 40.0%
GAGTAAAGAAAGACTTCGGA+GGG - Chr5:18146436-18146455 MsG0580025406.01.T01:intron 40.0%
GATGTATTATTCTACGCGGT+AGG - Chr5:18147288-18147307 MsG0580025406.01.T01:intron 40.0%
GCAATGGTAAAGTTGTGTCA+CGG - Chr5:18144311-18144330 MsG0580025406.01.T01:intron 40.0%
GCACAATGACAGACTAATCA+GGG + Chr5:18139948-18139967 None:intergenic 40.0%
GCAGTATACATAGAGAGCTA+TGG + Chr5:18143596-18143615 None:intergenic 40.0%
GGAATATCATGTTTGGCACA+TGG - Chr5:18140547-18140566 MsG0580025406.01.T01:intron 40.0%
GTATCTTCAAACTATCCGAC+TGG - Chr5:18141591-18141610 MsG0580025406.01.T01:intron 40.0%
GTCAAGACCCAATTGTAACA+AGG + Chr5:18141264-18141283 None:intergenic 40.0%
GTCTGTATTGTCCATTCTCA+AGG - Chr5:18143726-18143745 MsG0580025406.01.T01:intron 40.0%
GTGTGTGTTGGAAATGATGA+GGG - Chr5:18140192-18140211 MsG0580025406.01.T01:CDS 40.0%
GTTAGAGAATGAAGTGGAAG+TGG + Chr5:18139444-18139463 None:intergenic 40.0%
TATGTGTGTACATGCACACA+TGG - Chr5:18142742-18142761 MsG0580025406.01.T01:intron 40.0%
TCATCAGAATCGAAAAGGGT+AGG + Chr5:18139554-18139573 None:intergenic 40.0%
TCGACTTCCAAAACTGTGTT+TGG + Chr5:18147520-18147539 None:intergenic 40.0%
TCTTCCAAACGATGACCTTT+CGG - Chr5:18141775-18141794 MsG0580025406.01.T01:intron 40.0%
TGAGTAAAGAAAGACTTCGG+AGG - Chr5:18146435-18146454 MsG0580025406.01.T01:intron 40.0%
TGATGGAATTTGCATTGGGA+AGG - Chr5:18144952-18144971 MsG0580025406.01.T01:five_prime_UTR 40.0%
TGGAAGTGGAAGAAGAAGAA+GGG + Chr5:18139430-18139449 None:intergenic 40.0%
TGTCCTGAATGCAATTGTTC+AGG + Chr5:18146959-18146978 None:intergenic 40.0%
TGTGTGTGTTGGAAATGATG+AGG - Chr5:18140191-18140210 MsG0580025406.01.T01:CDS 40.0%
TTAAACAGACTGAAGTGGCT+TGG + Chr5:18146610-18146629 None:intergenic 40.0%
TTCAACAAGCATCATGGAAC+AGG + Chr5:18145948-18145967 None:intergenic 40.0%
TTTGAAAGTGGAAGAGACAG+CGG + Chr5:18139393-18139412 None:intergenic 40.0%
! AATCCTTTTCCGATTCCAGT+AGG + Chr5:18143634-18143653 None:intergenic 40.0%
! AGTGACCTTTCTTGTTGTGT+TGG - Chr5:18140166-18140185 MsG0580025406.01.T01:intron 40.0%
! ATGTGACACCTTTGTTGCTT+CGG + Chr5:18142043-18142062 None:intergenic 40.0%
! CAGAAAGTGGCCAATAGTTT+TGG + Chr5:18146204-18146223 None:intergenic 40.0%
! CATATGGGTGAATATTGGCT+CGG - Chr5:18143401-18143420 MsG0580025406.01.T01:five_prime_UTR 40.0%
! CATCTTCTCTGCAGTTTTCT+TGG - Chr5:18143253-18143272 MsG0580025406.01.T01:intron 40.0%
! CTCATCATTTGGGTTTGGAT+GGG - Chr5:18145706-18145725 MsG0580025406.01.T01:intron 40.0%
! GTGACCTTTCTTGTTGTGTT+GGG - Chr5:18140167-18140186 MsG0580025406.01.T01:intron 40.0%
! TGACCTTTCTTGTTGTGTTG+GGG - Chr5:18140168-18140187 MsG0580025406.01.T01:intron 40.0%
! TTACACAGAGGTTTGTTTCC+AGG + Chr5:18144345-18144364 None:intergenic 40.0%
!! ACATGTTTTTGTTACGTGCC+AGG - Chr5:18141689-18141708 MsG0580025406.01.T01:intron 40.0%
!! AGGACCTTTTGGATTTTGAC+GGG - Chr5:18144972-18144991 MsG0580025406.01.T01:five_prime_UTR 40.0%
!! CTAATTCTGAGGTGCATCAA+AGG + Chr5:18140962-18140981 None:intergenic 40.0%
!! CTCTACGCTTTTTGAACGTT+TGG + Chr5:18140903-18140922 None:intergenic 40.0%
!! GAAAGTCTTTGAGACAAGGA+TGG + Chr5:18143105-18143124 None:intergenic 40.0%
!! GAAGGAAAGTCTTTGAGACA+AGG + Chr5:18143109-18143128 None:intergenic 40.0%
!! TGATTAGTCTGTCATTGTGC+CGG - Chr5:18139948-18139967 MsG0580025406.01.T01:CDS 40.0%
!! TGCCAGAAATTTTTAGGGAG+AGG - Chr5:18146834-18146853 MsG0580025406.01.T01:intron 40.0%
!! TGGCTCGGTAATTAATGCTT+TGG - Chr5:18143416-18143435 MsG0580025406.01.T01:five_prime_UTR 40.0%
!! TGGTTGATAGCAGGAACATA+GGG - Chr5:18140632-18140651 MsG0580025406.01.T01:intron 40.0%
!! TTGGTTGATAGCAGGAACAT+AGG - Chr5:18140631-18140650 MsG0580025406.01.T01:intron 40.0%
!!! AGAACCGTTACTTTTACCAC+TGG + Chr5:18141229-18141248 None:intergenic 40.0%
!!! CTTTTTTAAAGGTGGTCACC+GGG + Chr5:18145887-18145906 None:intergenic 40.0%
!!! GCTTTTTTAAAGGTGGTCAC+CGG + Chr5:18145888-18145907 None:intergenic 40.0%
AAAAGCGGCAACTATCCAAG+TGG - Chr5:18145043-18145062 MsG0580025406.01.T01:five_prime_UTR 45.0%
AAAATCTGAAGGGTGAGCCT+TGG - Chr5:18144284-18144303 MsG0580025406.01.T01:intron 45.0%
AAAGAGGGAGACAGTAGTAG+CGG - Chr5:18146234-18146253 MsG0580025406.01.T01:intron 45.0%
AAATGAAAACGAGCAGCAGG+AGG - Chr5:18147122-18147141 MsG0580025406.01.T01:intron 45.0%
AAGAAGAAGGGTTTGTAGGG+TGG + Chr5:18139418-18139437 None:intergenic 45.0%
AAGGATTGTGGGATTCAAGG+TGG + Chr5:18140594-18140613 None:intergenic 45.0%
ACACCCCAACACAACAAGAA+AGG + Chr5:18140174-18140193 None:intergenic 45.0%
ACGCACATACCAGATCACTT+GGG - Chr5:18147216-18147235 MsG0580025406.01.T01:intron 45.0%
AGAAGAAGGGTTTGTAGGGT+GGG + Chr5:18139417-18139436 None:intergenic 45.0%
AGACTTCATCCCAAGTGATC+TGG + Chr5:18147228-18147247 None:intergenic 45.0%
AGAGCAAAGCCATATGTGGA+CGG + Chr5:18139884-18139903 None:intergenic 45.0%
AGAGGTCAAGATAAGCCGAA+AGG + Chr5:18141793-18141812 None:intergenic 45.0%
AGCTTCTGTTAGTTGACGGT+GGG - Chr5:18139914-18139933 MsG0580025406.01.T01:CDS 45.0%
AGGAAATGAAAACGAGCAGC+AGG - Chr5:18147119-18147138 MsG0580025406.01.T01:intron 45.0%
AGTTAATCCCATCAGCTGAG+AGG - Chr5:18141339-18141358 MsG0580025406.01.T01:intron 45.0%
ATCTTCTTCTTCGTCGACCT+TGG + Chr5:18139269-18139288 None:intergenic 45.0%
ATTCTACAGCATCTTCGCGA+AGG + Chr5:18144820-18144839 None:intergenic 45.0%
CAACCAAAATTCCCCAACCT+CGG + Chr5:18147702-18147721 None:intergenic 45.0%
CAGACAAGACATCAACCATC+AGG + Chr5:18144515-18144534 None:intergenic 45.0%
CATCAGGATCATGGTTCACA+AGG + Chr5:18144499-18144518 None:intergenic 45.0%
CATGTCAGGAATATCCCCAT+TGG + Chr5:18142156-18142175 None:intergenic 45.0%
CCAACCCGTCAAAATCCAAA+AGG + Chr5:18144979-18144998 None:intergenic 45.0%
CCACCAGAAACAAACGGTTT+CGG + Chr5:18139494-18139513 None:intergenic 45.0%
CCAGGCTACTATTTCATGTC+AGG + Chr5:18142170-18142189 None:intergenic 45.0%
CCATACTGCCAGCAAATTCT+GGG + Chr5:18141816-18141835 None:intergenic 45.0%
CCATCCAAACCCAAATGATG+AGG + Chr5:18145708-18145727 None:intergenic 45.0%
CCTGACATGAAATAGTAGCC+TGG - Chr5:18142167-18142186 MsG0580025406.01.T01:intron 45.0%
CTACATAGATCAAGCAACGG+TGG + Chr5:18142433-18142452 None:intergenic 45.0%
CTGTCAATAGTGCGCTATTG+TGG - Chr5:18142805-18142824 MsG0580025406.01.T01:intron 45.0%
CTTGTGAACCATGATCCTGA+TGG - Chr5:18144497-18144516 MsG0580025406.01.T01:intron 45.0%
GAAAGACAGAGGCAAGAAAG+AGG - Chr5:18140829-18140848 MsG0580025406.01.T01:intron 45.0%
GAATTGCTCAAGAAGGATGC+GGG - Chr5:18145338-18145357 MsG0580025406.01.T01:intron 45.0%
GAATTGCTCAAGAAGGATGC+TGG - Chr5:18145338-18145357 MsG0580025406.01.T01:intron 45.0%
GACATCAACCATCAGGATCA+TGG + Chr5:18144508-18144527 None:intergenic 45.0%
GACCTTGGATTCGACTACTT+AGG + Chr5:18139254-18139273 None:intergenic 45.0%
GCACAGCAGATGATACAAAC+TGG + Chr5:18146114-18146133 None:intergenic 45.0%
GCAGATAGGCATGTTAGTGT+TGG - Chr5:18147334-18147353 MsG0580025406.01.T01:intron 45.0%
GCAGTAGCTACTTGTTCTCA+AGG - Chr5:18142566-18142585 MsG0580025406.01.T01:intron 45.0%
GGAATTGCTCAAGAAGGATG+CGG - Chr5:18145337-18145356 MsG0580025406.01.T01:intron 45.0%
GGCACAATGACAGACTAATC+AGG + Chr5:18139949-18139968 None:intergenic 45.0%
GGTGCTAACAATTCCTGTGT+TGG - Chr5:18139856-18139875 MsG0580025406.01.T01:CDS 45.0%
GTGGAAGTGGAAGAAGAAGA+AGG + Chr5:18139431-18139450 None:intergenic 45.0%
TAAGCCGAAAGGTCATCGTT+TGG + Chr5:18141782-18141801 None:intergenic 45.0%
TATAAGGGACCATAGTGGCA+GGG - Chr5:18141513-18141532 MsG0580025406.01.T01:five_prime_UTR 45.0%
TCGCGAAGATGCTGTAGAAT+AGG - Chr5:18144820-18144839 MsG0580025406.01.T01:intron 45.0%
TCTGTTTGCTTCTAACACGG+TGG - Chr5:18141656-18141675 MsG0580025406.01.T01:intron 45.0%
TCTTTAGCAGTTGTCTCACC+TGG + Chr5:18141710-18141729 None:intergenic 45.0%
TGATGTAACCATTTGCCCTC+TGG - Chr5:18144470-18144489 MsG0580025406.01.T01:intron 45.0%
TGTTAAACAGCCCACATGCA+TGG - Chr5:18140296-18140315 MsG0580025406.01.T01:exon 45.0%
TTATAAGGGACCATAGTGGC+AGG - Chr5:18141512-18141531 MsG0580025406.01.T01:five_prime_UTR 45.0%
TTATTCTACGCGGTAGGAAC+TGG - Chr5:18147294-18147313 MsG0580025406.01.T01:intron 45.0%
TTCAAACTATCCGACTGGTG+AGG - Chr5:18141596-18141615 MsG0580025406.01.T01:intron 45.0%
TTCCAAAATCCCTGCCACTA+TGG + Chr5:18141525-18141544 None:intergenic 45.0%
TTCTACAGCATCTTCGCGAA+GGG + Chr5:18144819-18144838 None:intergenic 45.0%
! AGGCACTCAACTTTTAAGCC+AGG + Chr5:18142188-18142207 None:intergenic 45.0%
! ATACTGTCTGAAGCTCCTAC+TGG - Chr5:18143616-18143635 MsG0580025406.01.T01:intron 45.0%
! CAGACCTCATCATTTGGGTT+TGG - Chr5:18145701-18145720 MsG0580025406.01.T01:intron 45.0%
! CCTCATCATTTGGGTTTGGA+TGG - Chr5:18145705-18145724 MsG0580025406.01.T01:intron 45.0%
! GAGTATGGACTTTGGGAGTA+TGG + Chr5:18142020-18142039 None:intergenic 45.0%
! TATGCACTTGCCACTTACTC+TGG - Chr5:18144645-18144664 MsG0580025406.01.T01:intron 45.0%
! TCTGAAGCTCCTACTGGAAT+CGG - Chr5:18143622-18143641 MsG0580025406.01.T01:intron 45.0%
! TGTGACACCTTTGTTGCTTC+GGG + Chr5:18142042-18142061 None:intergenic 45.0%
! TGTTAGTGTTGGGAAGAGGT+AGG - Chr5:18147345-18147364 MsG0580025406.01.T01:intron 45.0%
! TTGCATTGGGAAGGACCTTT+TGG - Chr5:18144961-18144980 MsG0580025406.01.T01:five_prime_UTR 45.0%
! TTGTCCTGATGATGCAAGGA+AGG + Chr5:18146693-18146712 None:intergenic 45.0%
! TTTTCTGCATGTCTGGCACA+CGG - Chr5:18140493-18140512 MsG0580025406.01.T01:intron 45.0%
!! AGAATTTGCTGGCAGTATGG+GGG - Chr5:18141816-18141835 MsG0580025406.01.T01:five_prime_UTR 45.0%
!! CAGAATTTGCTGGCAGTATG+GGG - Chr5:18141815-18141834 MsG0580025406.01.T01:intron 45.0%
!! CCAGAATTTGCTGGCAGTAT+GGG - Chr5:18141814-18141833 MsG0580025406.01.T01:intron 45.0%
!! CCTTTTGGATTTTGACGGGT+TGG - Chr5:18144976-18144995 MsG0580025406.01.T01:five_prime_UTR 45.0%
!! GATGGCAGAATATGATGGAC+TGG + Chr5:18147025-18147044 None:intergenic 45.0%
!! GTGAGTCTGATTGCTTTTCC+TGG - Chr5:18142277-18142296 MsG0580025406.01.T01:intron 45.0%
!! TGAAGAGGCTTTAGGATGGT+CGG + Chr5:18141556-18141575 None:intergenic 45.0%
!!! TTGGATTTTGACGGGTTGGA+CGG - Chr5:18144980-18144999 MsG0580025406.01.T01:five_prime_UTR 45.0%
!!! TATATATATATATATCATTT+TGG + Chr5:18143314-18143333 None:intergenic 5.0%
AGGGACAGTGTCGTCATTGA+TGG - Chr5:18144935-18144954 MsG0580025406.01.T01:intron 50.0%
AGGTCGCAACCAACTTGTCT+CGG - Chr5:18147094-18147113 MsG0580025406.01.T01:intron 50.0%
ATGGTTCACAAGGTCACCAG+AGG + Chr5:18144489-18144508 None:intergenic 50.0%
CAACATCCCTCCAGAGTAAG+TGG + Chr5:18144658-18144677 None:intergenic 50.0%
CATCTTCGCGAAGGGGAAAA+AGG + Chr5:18144811-18144830 None:intergenic 50.0%
CATGAGGTTGTAAGGCCACT+TGG + Chr5:18145061-18145080 None:intergenic 50.0%
CCAGAAACAAACGGTTTCGG+CGG + Chr5:18139491-18139510 None:intergenic 50.0%
CCATACTCCCGAAGCAACAA+AGG - Chr5:18142032-18142051 MsG0580025406.01.T01:five_prime_UTR 50.0%
CCCATACTGCCAGCAAATTC+TGG + Chr5:18141817-18141836 None:intergenic 50.0%
CTGTCCTTCCTTGCATCATC+AGG - Chr5:18146686-18146705 MsG0580025406.01.T01:intron 50.0%
CTGTTAGTTGACGGTGGGAT+TGG - Chr5:18139919-18139938 MsG0580025406.01.T01:CDS 50.0%
CTTAGGAGTTCGAATCGTGC+AGG - Chr5:18139835-18139854 MsG0580025406.01.T01:CDS 50.0%
CTTGCATCATCAGGACAACC+TGG - Chr5:18146695-18146714 MsG0580025406.01.T01:intron 50.0%
GAAGAAGGGTTTGTAGGGTG+GGG + Chr5:18139416-18139435 None:intergenic 50.0%
GAATCGAAAAGGGTAGGAGC+AGG + Chr5:18139548-18139567 None:intergenic 50.0%
GACGCACATACCAGATCACT+TGG - Chr5:18147215-18147234 MsG0580025406.01.T01:intron 50.0%
GAGCAAAGCCATATGTGGAC+GGG + Chr5:18139883-18139902 None:intergenic 50.0%
GAGCTTCTGTTAGTTGACGG+TGG - Chr5:18139913-18139932 MsG0580025406.01.T01:CDS 50.0%
GCAACCAACTTGTCTCGGAA+AGG - Chr5:18147099-18147118 MsG0580025406.01.T01:intron 50.0%
GCTCCTACTGGAATCGGAAA+AGG - Chr5:18143628-18143647 MsG0580025406.01.T01:intron 50.0%
GGTAGGAACTGGTGCCTAAA+TGG - Chr5:18147305-18147324 MsG0580025406.01.T01:intron 50.0%
GGTTGGACGGTGTGAAAGAT+GGG - Chr5:18144993-18145012 MsG0580025406.01.T01:five_prime_UTR 50.0%
GTTGGGAAGAGGTAGGAGAA+GGG - Chr5:18147352-18147371 MsG0580025406.01.T01:intron 50.0%
TATTCGCATGCCTCACCAGT+CGG + Chr5:18141609-18141628 None:intergenic 50.0%
TCTACAGCATCTTCGCGAAG+GGG + Chr5:18144818-18144837 None:intergenic 50.0%
TGACCTCTCCCAGAATTTGC+TGG - Chr5:18141805-18141824 MsG0580025406.01.T01:intron 50.0%
TGGCAGCTCATTGTCTGCTT+TGG + Chr5:18146819-18146838 None:intergenic 50.0%
TGGCTGTATAGCAGCTGCTA+CGG + Chr5:18142884-18142903 None:intergenic 50.0%
TGGTTCACAAGGTCACCAGA+GGG + Chr5:18144488-18144507 None:intergenic 50.0%
TGTAGGGTGGGGTTTGAAAG+TGG + Chr5:18139405-18139424 None:intergenic 50.0%
TGTCTCCCTCTTTGCAACCA+CGG + Chr5:18146227-18146246 None:intergenic 50.0%
TGTTGGGAAGAGGTAGGAGA+AGG - Chr5:18147351-18147370 MsG0580025406.01.T01:intron 50.0%
TTCTGCCGTGGTTGCAAAGA+GGG - Chr5:18146219-18146238 MsG0580025406.01.T01:intron 50.0%
TTGTGTTGGGGTGTGTGTGT+TGG - Chr5:18140180-18140199 MsG0580025406.01.T01:CDS 50.0%
TTTCCAGTGCACTCTGCTCA+GGG - Chr5:18144916-18144935 MsG0580025406.01.T01:intron 50.0%
TTTCTGCCGTGGTTGCAAAG+AGG - Chr5:18146218-18146237 MsG0580025406.01.T01:intron 50.0%
TTTGCAACCACGGCAGAAAG+TGG + Chr5:18146217-18146236 None:intergenic 50.0%
! ACTCTGGAGGGATGTTGTGT+TGG - Chr5:18144661-18144680 MsG0580025406.01.T01:intron 50.0%
! ATGCGGGAGCTTTAGTTCAC+GGG - Chr5:18144426-18144445 MsG0580025406.01.T01:intron 50.0%
! CACTTGCCACTTACTCTGGA+GGG - Chr5:18144649-18144668 MsG0580025406.01.T01:intron 50.0%
! CAGGTTGTCCTGATGATGCA+AGG + Chr5:18146697-18146716 None:intergenic 50.0%
! CATGCGGGAGCTTTAGTTCA+CGG - Chr5:18144425-18144444 MsG0580025406.01.T01:intron 50.0%
! CCTTTGTTGCTTCGGGAGTA+TGG + Chr5:18142035-18142054 None:intergenic 50.0%
! CTTTGAGAAAGCTCTCGAGG+AGG + Chr5:18139524-18139543 None:intergenic 50.0%
! GACCATAGTGGCAGGGATTT+TGG - Chr5:18141520-18141539 MsG0580025406.01.T01:five_prime_UTR 50.0%
! GCTTCGGGAGTATGGACTTT+GGG + Chr5:18142027-18142046 None:intergenic 50.0%
! GGCATGTTAGTGTTGGGAAG+AGG - Chr5:18147341-18147360 MsG0580025406.01.T01:intron 50.0%
! GGTCTTTGAGAAAGCTCTCG+AGG + Chr5:18139527-18139546 None:intergenic 50.0%
! GTTTCGGCGGTTGTTGTTGT+TGG + Chr5:18139478-18139497 None:intergenic 50.0%
! TGCTTCGGGAGTATGGACTT+TGG + Chr5:18142028-18142047 None:intergenic 50.0%
!! CCCAGAATTTGCTGGCAGTA+TGG - Chr5:18141813-18141832 MsG0580025406.01.T01:intron 50.0%
!! CCGAAACCGTTTGTTTCTGG+TGG - Chr5:18139491-18139510 MsG0580025406.01.T01:intron 50.0%
!! CGAGGTTGGGGAATTTTGGT+TGG - Chr5:18147700-18147719 MsG0580025406.01.T01:five_prime_UTR 50.0%
ACTTTACCATTGCGCCGCCA+AGG + Chr5:18144304-18144323 None:intergenic 55.0%
ATCTGAAGGGTGAGCCTTGG+CGG - Chr5:18144287-18144306 MsG0580025406.01.T01:intron 55.0%
CAAGGTCACCAGAGGGCAAA+TGG + Chr5:18144481-18144500 None:intergenic 55.0%
CCGCCGAAACCGTTTGTTTC+TGG - Chr5:18139488-18139507 MsG0580025406.01.T01:intron 55.0%
CTAAAGCTCCCGCATGTGCA+AGG + Chr5:18144421-18144440 None:intergenic 55.0%
CTCCACAGGACATGCAGTAG+CGG - Chr5:18142840-18142859 MsG0580025406.01.T01:intron 55.0%
CTTCCCGAACCTTGCACATG+CGG - Chr5:18144409-18144428 MsG0580025406.01.T01:intron 55.0%
CTTTCCAGTGCACTCTGCTC+AGG - Chr5:18144915-18144934 MsG0580025406.01.T01:intron 55.0%
GAAAGTGGAAGAGACAGCGG+CGG + Chr5:18139390-18139409 None:intergenic 55.0%
GAAGAGGTAGGAGAAGGGAG+GGG - Chr5:18147357-18147376 MsG0580025406.01.T01:intron 55.0%
GCGCTATTGTGGTGTAGCAG+AGG - Chr5:18142816-18142835 MsG0580025406.01.T01:intron 55.0%
GGAAGAGGTAGGAGAAGGGA+GGG - Chr5:18147356-18147375 MsG0580025406.01.T01:intron 55.0%
GGGTTGGACGGTGTGAAAGA+TGG - Chr5:18144992-18145011 MsG0580025406.01.T01:five_prime_UTR 55.0%
TATGTGGACGGGACCAACAC+AGG + Chr5:18139872-18139891 None:intergenic 55.0%
TGTGTCACGGGTTCAAGTCC+TGG - Chr5:18144324-18144343 MsG0580025406.01.T01:intron 55.0%
TTCCCGAACCTTGCACATGC+GGG - Chr5:18144410-18144429 MsG0580025406.01.T01:intron 55.0%
! CTATTGGCCACTTTCTGCCG+TGG - Chr5:18146207-18146226 MsG0580025406.01.T01:intron 55.0%
! CTGCCAGCAAATTCTGGGAG+AGG + Chr5:18141811-18141830 None:intergenic 55.0%
! GCACTTGCCACTTACTCTGG+AGG - Chr5:18144648-18144667 MsG0580025406.01.T01:intron 55.0%
! GGGAGACAGTAGTAGCGGAA+CGG - Chr5:18146239-18146258 MsG0580025406.01.T01:intron 55.0%
! GTGTTGGTCCCGTCCACATA+TGG - Chr5:18139872-18139891 MsG0580025406.01.T01:CDS 55.0%
!! ATAGCTTGGGGTTGGCCATG+AGG - Chr5:18141372-18141391 MsG0580025406.01.T01:intron 55.0%
CGCATGTGCAAGGTTCGGGA+AGG + Chr5:18144411-18144430 None:intergenic 60.0%
CGCTACTGCATGTCCTGTGG+AGG + Chr5:18142842-18142861 None:intergenic 60.0%
CTCCCGCATGTGCAAGGTTC+GGG + Chr5:18144415-18144434 None:intergenic 60.0%
CTCCGCTACTGCATGTCCTG+TGG + Chr5:18142845-18142864 None:intergenic 60.0%
GCTCCCGCATGTGCAAGGTT+CGG + Chr5:18144416-18144435 None:intergenic 60.0%
GGGAAGAGGTAGGAGAAGGG+AGG - Chr5:18147355-18147374 MsG0580025406.01.T01:intron 60.0%
TAGGAACTCGCGCCGAGGTT+GGG - Chr5:18147687-18147706 MsG0580025406.01.T01:five_prime_UTR 60.0%
TGGTTTAGGAACTCGCGCCG+AGG - Chr5:18147682-18147701 MsG0580025406.01.T01:five_prime_UTR 60.0%
TGTCCCTGAGCAGAGTGCAC+TGG + Chr5:18144922-18144941 None:intergenic 60.0%
TTAGGAACTCGCGCCGAGGT+TGG - Chr5:18147686-18147705 MsG0580025406.01.T01:five_prime_UTR 60.0%
! AAGGATGCGGGCTACGTGAG+AGG - Chr5:18145350-18145369 MsG0580025406.01.T01:intron 60.0%
! AGGATGCGGGCTACGTGAGA+GGG - Chr5:18145351-18145370 MsG0580025406.01.T01:intron 60.0%
! GCGCCGAGGTTGGGGAATTT+TGG - Chr5:18147696-18147715 MsG0580025406.01.T01:five_prime_UTR 60.0%
AGGAACTCGCGCCGAGGTTG+GGG - Chr5:18147688-18147707 MsG0580025406.01.T01:five_prime_UTR 65.0%
CGAGCAGCAGGAGGACAGCA+TGG - Chr5:18147131-18147150 MsG0580025406.01.T01:intron 65.0%
GGTGTAGCAGAGGCCTCCAC+AGG - Chr5:18142826-18142845 MsG0580025406.01.T01:intron 65.0%
GGTGAGCCTTGGCGGCGCAA+TGG - Chr5:18144295-18144314 MsG0580025406.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr5 gene 18139208 18147819 18139208 ID=MsG0580025406.01;Name=MsG0580025406.01
Chr5 mRNA 18139208 18147819 18139208 ID=MsG0580025406.01.T01;Parent=MsG0580025406.01;Name=MsG0580025406.01.T01;_AED=0.07;_eAED=0.07;_QI=1794|1|1|1|0.33|0.30|13|402|130
Chr5 exon 18139208 18139500 18139208 ID=MsG0580025406.01.T01:exon:19100;Parent=MsG0580025406.01.T01
Chr5 exon 18139676 18140052 18139676 ID=MsG0580025406.01.T01:exon:19099;Parent=MsG0580025406.01.T01
Chr5 exon 18140172 18140374 18140172 ID=MsG0580025406.01.T01:exon:19098;Parent=MsG0580025406.01.T01
Chr5 exon 18140676 18140828 18140676 ID=MsG0580025406.01.T01:exon:19097;Parent=MsG0580025406.01.T01
Chr5 exon 18141447 18141554 18141447 ID=MsG0580025406.01.T01:exon:19096;Parent=MsG0580025406.01.T01
Chr5 exon 18141816 18142104 18141816 ID=MsG0580025406.01.T01:exon:19095;Parent=MsG0580025406.01.T01
Chr5 exon 18144565 18144633 18144565 ID=MsG0580025406.01.T01:exon:19093;Parent=MsG0580025406.01.T01
Chr5 exon 18144944 18145316 18144944 ID=MsG0580025406.01.T01:exon:19092;Parent=MsG0580025406.01.T01
Chr5 five_prime_UTR 18147426 18147819 18147426 ID=MsG0580025406.01.T01:five_prime_utr;Parent=MsG0580025406.01.T01
Chr5 five_prime_UTR 18146338 18146382 18146338 ID=MsG0580025406.01.T01:five_prime_utr;Parent=MsG0580025406.01.T01
Chr5 five_prime_UTR 18146103 18146221 18146103 ID=MsG0580025406.01.T01:five_prime_utr;Parent=MsG0580025406.01.T01
Chr5 five_prime_UTR 18145415 18145499 18145415 ID=MsG0580025406.01.T01:five_prime_utr;Parent=MsG0580025406.01.T01
Chr5 five_prime_UTR 18144944 18145316 18144944 ID=MsG0580025406.01.T01:five_prime_utr;Parent=MsG0580025406.01.T01
Chr5 five_prime_UTR 18144565 18144633 18144565 ID=MsG0580025406.01.T01:five_prime_utr;Parent=MsG0580025406.01.T01
Chr5 five_prime_UTR 18143365 18143445 18143365 ID=MsG0580025406.01.T01:five_prime_utr;Parent=MsG0580025406.01.T01
Chr5 five_prime_UTR 18141816 18142104 18141816 ID=MsG0580025406.01.T01:five_prime_utr;Parent=MsG0580025406.01.T01
Chr5 five_prime_UTR 18141447 18141554 18141447 ID=MsG0580025406.01.T01:five_prime_utr;Parent=MsG0580025406.01.T01
Chr5 five_prime_UTR 18140676 18140828 18140676 ID=MsG0580025406.01.T01:five_prime_utr;Parent=MsG0580025406.01.T01
Chr5 five_prime_UTR 18140297 18140374 18140297 ID=MsG0580025406.01.T01:five_prime_utr;Parent=MsG0580025406.01.T01
Chr5 CDS 18140172 18140296 18140172 ID=MsG0580025406.01.T01:cds;Parent=MsG0580025406.01.T01
Chr5 CDS 18139785 18140052 18139785 ID=MsG0580025406.01.T01:cds;Parent=MsG0580025406.01.T01
Chr5 three_prime_UTR 18139676 18139784 18139676 ID=MsG0580025406.01.T01:three_prime_utr;Parent=MsG0580025406.01.T01
Chr5 three_prime_UTR 18139208 18139500 18139208 ID=MsG0580025406.01.T01:three_prime_utr;Parent=MsG0580025406.01.T01
Chr5 mRNA 18141443 18147819 18141443 ID=MsG0580025406.01.T02;Parent=MsG0580025406.01;Name=MsG0580025406.01.T02;_AED=0.34;_eAED=0.36;_QI=79|0.5|0.55|0.88|0.5|0.55|9|0|351
Chr5 exon 18141443 18141598 18141443 ID=MsG0580025406.01.T02:exon:19104;Parent=MsG0580025406.01.T02
Chr5 exon 18142026 18142104 18142026 ID=MsG0580025406.01.T02:exon:19103;Parent=MsG0580025406.01.T02
Chr5 exon 18145190 18145316 18145190 ID=MsG0580025406.01.T02:exon:19102;Parent=MsG0580025406.01.T02
Chr5 exon 18145603 18145651 18145603 ID=MsG0580025406.01.T02:exon:19101;Parent=MsG0580025406.01.T02
Chr5 five_prime_UTR 18147741 18147819 18147741 ID=MsG0580025406.01.T02:five_prime_utr;Parent=MsG0580025406.01.T02
Chr5 CDS 18147426 18147740 18147426 ID=MsG0580025406.01.T02:cds;Parent=MsG0580025406.01.T02
Chr5 CDS 18146338 18146382 18146338 ID=MsG0580025406.01.T02:cds;Parent=MsG0580025406.01.T02
Chr5 CDS 18146103 18146221 18146103 ID=MsG0580025406.01.T02:cds;Parent=MsG0580025406.01.T02
Chr5 CDS 18145603 18145651 18145603 ID=MsG0580025406.01.T02:cds;Parent=MsG0580025406.01.T02
Chr5 CDS 18145415 18145499 18145415 ID=MsG0580025406.01.T02:cds;Parent=MsG0580025406.01.T02
Chr5 CDS 18145190 18145316 18145190 ID=MsG0580025406.01.T02:cds;Parent=MsG0580025406.01.T02
Chr5 CDS 18143365 18143445 18143365 ID=MsG0580025406.01.T02:cds;Parent=MsG0580025406.01.T02
Chr5 CDS 18142026 18142104 18142026 ID=MsG0580025406.01.T02:cds;Parent=MsG0580025406.01.T02
Chr5 CDS 18141443 18141598 18141443 ID=MsG0580025406.01.T02:cds;Parent=MsG0580025406.01.T02
Gene Sequence

>MsG0580025406.01.T01

ATGGGCCATAGGCTCTCTATTGCAATAAGTGTAAACTATCTTATGTCAATTTTGCAATTACTGTTATCTGAGAATCTCTTTGAAGCCAAAGCAGACAATGAGCTGCCAGAAATTTTTAGGGAGAGGACATTTCTTATGCGGGAGATATTGATATTACTTAATAGACTAGTATCCAGTCCATCATATTCTGCCATCGTTATACGCGATTTAACAGAAAAGAGGGTAATGGCTACTTTGACATTTGAGGTCGCAACCAACTTGTCTCGGAAAGGAAATGAAAACGAGCAGCAGGAGGACAGCATGGTGAAGCAAATAAGACGAACTGAAATCGTTGACCTTGCTTGCCAATTCAAGAATAGGGTAGAGACGCACATACCAGATCACTTGGGATGA

>MsG0580025406.01.T02

ATGATGAACAACAACAACAACAACAACAACGACAACAACGATGATATCTTAGGCGATGAATGGGACGAAGATTTTCTCAACAGAGCTATTGAAGCTGAAACCGCCGCTGTCTCTTCCACTTTCAAACCCCACCCTACAAACCCTTCTTCTTCTTCCACTTCCACTTCATTCTCTAACCATCATCAATTCCAACAACAACAACCGCCGAAACCGTTTGTTTCTGGTGGTTTCTCACCTCCTCGAGAGCTTTCTCAAAGACCTGCTCCTACCCTTTTCGATTCTGATGATAAAGACATTGAATTTGAGCCATTTAAGGAACATAGGGAGCCAAGACATGCTTCAAAACAGATTGTGAATCTGGAAAAGGAGTGCCTCAAGTTAAAGAAAGACAGAGGCAAGAAAGAGGATCAGCCCAAATTCGTGTCTTCTGAGAATGAAGAAGATAATTCTCGTGCCAAACGTTCAAAAAGCGTAGAGAACTTGGGGTTGGCCATGAGGAATAACTTAGAAGTGTCTAATATAACAGCCTGGCAGGGATTTTGGAATTCGTGCTCCGACCATCCTAAAGCCTCTTCAAAATTTCAAAGTGGAGTATCTTCAAACTATCCGACTGGTGAGACAACTGCTAAAGATAAAGGGGTTGAAACTGAAATAGTTACTCATCGAGTAGCTCAAGATCTTCCAAACGATGACCTTTCGGCTTATCTTGACCTCTCCCAGAATTTGCTGGCAGTATGGGGGTTGCTTTTGTCCATAGCTCTCTATGTATACTGCATACTGTCTGAAGCTCCTACTGGAATCGGAAAAGGATTTCAAAAAAGTGCACTCTGCTCAGGGACAGTGTCGTCATTGATGGAATTTGCATTGGGAAGGACCTTTTGGATTTTGACGGGTTGGACGATATTATATTATAGTAATGCCATGAGAAATTTGCTTGAATACAGGTTTAGTCAGAACACAGTTTTCAAAATTATTTCGGAATTGCTCAAGAAGGATGCTGGGCTACGTGTAAAAGAGAAAAACTCTAAGACTTCTGTACCTAGTACTAAATTGTAA

Protein sequence

>MsG0580025406.01.T01

MGHRLSIAISVNYLMSILQLLLSENLFEAKADNELPEIFRERTFLMREILILLNRLVSSPSYSAIVIRDLTEKRVMATLTFEVATNLSRKGNENEQQEDSMVKQIRRTEIVDLACQFKNRVETHIPDHLG*

>MsG0580025406.01.T02

MMNNNNNNNNDNNDDILGDEWDEDFLNRAIEAETAAVSSTFKPHPTNPSSSSTSTSFSNHHQFQQQQPPKPFVSGGFSPPRELSQRPAPTLFDSDDKDIEFEPFKEHREPRHASKQIVNLEKECLKLKKDRGKKEDQPKFVSSENEEDNSRAKRSKSVENLGLAMRNNLEVSNITAWQGFWNSCSDHPKASSKFQSGVSSNYPTGETTAKDKGVETEIVTHRVAQDLPNDDLSAYLDLSQNLLAVWGLLLSIALYVYCILSEAPTGIGKGFQKSALCSGTVSSLMEFALGRTFWILTGWTILYYSNAMRNLLEYRFSQNTVFKIISELLKKDAGLRVKEKNSKTSVPSTKL*