Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040579.01.T02 | ABP65296.1 | 85.366 | 82 | 12 | 0 | 20 | 101 | 231 | 312 | 3.45E-43 | 154 |
| MsG0780040579.01.T03 | KAF1893998.1 | 97.222 | 36 | 1 | 0 | 1 | 36 | 261 | 296 | 7.03E-15 | 77.4 |
| MsG0780040579.01.T01 | AES81477.1 | 76.19 | 357 | 49 | 5 | 1 | 322 | 51 | 406 | 0 | 525 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040579.01.T01 | P48631 | 66.947 | 357 | 81 | 5 | 1 | 322 | 1 | 355 | 3.93E-161 | 457 |
| MsG0780040579.01.T02 | P48631 | 83.544 | 79 | 13 | 0 | 20 | 98 | 277 | 355 | 6.44E-43 | 146 |
| MsG0780040579.01.T03 | P48631 | 97.222 | 36 | 1 | 0 | 1 | 36 | 244 | 279 | 2.22E-16 | 73.2 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040579.01.T01 | G7KVD5 | 76.190 | 357 | 49 | 5 | 1 | 322 | 51 | 406 | 0.0 | 525 |
| MsG0780040579.01.T03 | A0A6A5PA36 | 97.222 | 36 | 1 | 0 | 1 | 36 | 261 | 296 | 3.36e-15 | 77.4 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048404.01 | MsG0780040579.01 | -0.802850 | 4.613694e-49 | 2.283928e-46 |
| MsG0080048462.01 | MsG0780040579.01 | -0.800880 | 1.171039e-48 | 5.514445e-46 |
| MsG0080048683.01 | MsG0780040579.01 | -0.828275 | 9.842659e-55 | 9.736681e-52 |
| MsG0080049032.01 | MsG0780040579.01 | -0.803518 | 3.354711e-49 | 1.689355e-46 |
| MsG0180000209.01 | MsG0780040579.01 | -0.807899 | 4.034701e-50 | 2.274284e-47 |
| MsG0180000470.01 | MsG0780040579.01 | -0.831215 | 1.893440e-55 | 2.041127e-52 |
| MsG0180000777.01 | MsG0780040579.01 | -0.833177 | 6.193274e-56 | 7.077028e-53 |
| MsG0180001141.01 | MsG0780040579.01 | -0.801714 | 7.902979e-49 | 3.800520e-46 |
| MsG0180001285.01 | MsG0780040579.01 | -0.807267 | 5.495699e-50 | 3.047502e-47 |
| MsG0180001886.01 | MsG0780040579.01 | -0.830091 | 3.568866e-55 | 3.722322e-52 |
| MsG0180002547.01 | MsG0780040579.01 | -0.806529 | 7.872018e-50 | 4.282549e-47 |
| MsG0180003189.01 | MsG0780040579.01 | -0.814274 | 1.674354e-51 | 1.118520e-48 |
| MsG0180003357.01 | MsG0780040579.01 | -0.801585 | 8.399865e-49 | 4.026245e-46 |
| MsG0180003671.01 | MsG0780040579.01 | -0.820650 | 6.133303e-53 | 4.881079e-50 |
| MsG0180003673.01 | MsG0780040579.01 | -0.812969 | 3.243604e-51 | 2.091335e-48 |
| MsG0180003686.01 | MsG0780040579.01 | -0.812253 | 4.653378e-51 | 2.944106e-48 |
| MsG0180003810.01 | MsG0780040579.01 | -0.805192 | 1.502899e-49 | 7.900943e-47 |
| MsG0180003854.01 | MsG0780040579.01 | -0.807816 | 4.201176e-50 | 2.363109e-47 |
| MsG0180003952.01 | MsG0780040579.01 | -0.800957 | 1.129557e-48 | 5.329401e-46 |
| MsG0180004449.01 | MsG0780040579.01 | -0.800714 | 1.266280e-48 | 5.937294e-46 |
| MsG0180004465.01 | MsG0780040579.01 | -0.801793 | 7.614402e-49 | 3.669113e-46 |
| MsG0180004725.01 | MsG0780040579.01 | -0.827964 | 1.169188e-54 | 1.146243e-51 |
| MsG0180004765.01 | MsG0780040579.01 | -0.849325 | 3.476452e-60 | 6.567209e-57 |
| MsG0180004779.01 | MsG0780040579.01 | -0.812221 | 4.728476e-51 | 2.989062e-48 |
| MsG0180004926.01 | MsG0780040579.01 | -0.810056 | 1.393297e-50 | 8.315003e-48 |
| MsG0180005668.01 | MsG0780040579.01 | -0.810438 | 1.152723e-50 | 6.948098e-48 |
| MsG0180005730.01 | MsG0780040579.01 | -0.823533 | 1.316311e-53 | 1.136401e-50 |
| MsG0180005799.01 | MsG0780040579.01 | -0.811585 | 6.503720e-51 | 4.041403e-48 |
| MsG0180005960.01 | MsG0780040579.01 | -0.804481 | 2.116394e-49 | 1.092390e-46 |
| MsG0180006155.01 | MsG0780040579.01 | -0.814032 | 1.893593e-51 | 1.256683e-48 |
| MsG0780040262.01 | MsG0780040579.01 | -0.841685 | 4.090278e-58 | 6.055878e-55 |
| MsG0780040384.01 | MsG0780040579.01 | -0.811309 | 7.465699e-51 | 4.605389e-48 |
| MsG0780040579.01 | MsG0780040704.01 | -0.804345 | 2.259148e-49 | 1.162031e-46 |
| MsG0780040579.01 | MsG0780040734.01 | -0.815320 | 9.821472e-52 | 6.749484e-49 |
| MsG0780040579.01 | MsG0780041387.01 | -0.830191 | 3.374160e-55 | 3.529875e-52 |
| MsG0780040579.01 | MsG0780041485.01 | -0.805258 | 1.456184e-49 | 7.667994e-47 |
| MsG0780040579.01 | MsG0780041491.01 | -0.809783 | 1.595318e-50 | 9.453184e-48 |
| MsG0780040579.01 | MsG0880042294.01 | -0.808478 | 3.036186e-50 | 1.737904e-47 |
| MsG0780040579.01 | MsG0880042622.01 | -0.802334 | 5.894104e-49 | 2.879659e-46 |
| MsG0780040579.01 | MsG0880042656.01 | -0.804945 | 1.692617e-49 | 8.842808e-47 |
| MsG0780040579.01 | MsG0880042966.01 | -0.804126 | 2.508350e-49 | 1.282999e-46 |
| MsG0780040579.01 | MsG0880043454.01 | -0.828506 | 8.656346e-55 | 8.621338e-52 |
| MsG0780040579.01 | MsG0880043509.01 | -0.838404 | 2.933964e-57 | 3.925700e-54 |
| MsG0780040579.01 | MsG0880044574.01 | -0.804390 | 2.210936e-49 | 1.138532e-46 |
| MsG0780040579.01 | MsG0880044728.01 | -0.826731 | 2.308966e-54 | 2.183536e-51 |
| MsG0780040579.01 | MsG0880045111.01 | -0.810316 | 1.224874e-50 | 7.359435e-48 |
| MsG0780040579.01 | MsG0880045362.01 | -0.854843 | 9.398386e-62 | 2.127349e-58 |
| MsG0780040579.01 | MsG0880045371.01 | -0.836050 | 1.174158e-56 | 1.462532e-53 |
| MsG0780040579.01 | MsG0880045535.01 | -0.857461 | 1.606884e-62 | 3.969087e-59 |
| MsG0780040579.01 | MsG0880045613.01 | -0.805279 | 1.441396e-49 | 7.594375e-47 |
| MsG0780040579.01 | MsG0880045736.01 | -0.807736 | 4.368678e-50 | 2.452279e-47 |
| MsG0780040579.01 | MsG0880045765.01 | -0.850228 | 1.944157e-60 | 3.782476e-57 |
| MsG0780040579.01 | MsG0880045937.01 | -0.810429 | 1.157787e-50 | 6.977101e-48 |
| MsG0780040579.01 | MsG0880046457.01 | -0.834117 | 3.607312e-56 | 4.239906e-53 |
| MsG0780040579.01 | MsG0880046531.01 | -0.839269 | 1.752574e-57 | 2.407647e-54 |
| MsG0780040579.01 | MsG0880046620.01 | -0.804167 | 2.460087e-49 | 1.259604e-46 |
| MsG0780040579.01 | MsG0880046790.01 | -0.811235 | 7.748068e-51 | 4.770445e-48 |
| MsG0780040579.01 | MsG0880047019.01 | -0.818377 | 2.022998e-52 | 1.511887e-49 |
| MsG0780040579.01 | MsG0880047052.01 | -0.814710 | 1.341399e-51 | 9.066832e-49 |
| MsG0780040579.01 | MsG0880047472.01 | -0.802972 | 4.353060e-49 | 2.161442e-46 |
| MsG0780040579.01 | MsG0880047473.01 | -0.811653 | 6.287924e-51 | 3.914087e-48 |
| MsG0780040579.01 | MsG0880047764.01 | -0.817283 | 3.573520e-52 | 2.591297e-49 |
| MsG0280010722.01 | MsG0780040579.01 | -0.808662 | 2.774072e-50 | 1.595368e-47 |
| MsG0280010778.01 | MsG0780040579.01 | -0.823170 | 1.600094e-53 | 1.367332e-50 |
| MsG0280010896.01 | MsG0780040579.01 | -0.803349 | 3.637713e-49 | 1.823767e-46 |
| MsG0280011025.01 | MsG0780040579.01 | -0.810803 | 9.609968e-51 | 5.849569e-48 |
| MsG0280011032.01 | MsG0780040579.01 | -0.821198 | 4.585778e-53 | 3.706259e-50 |
| MsG0280011109.01 | MsG0780040579.01 | -0.829404 | 5.246296e-55 | 5.364451e-52 |
| MsG0280011163.01 | MsG0780040579.01 | -0.807686 | 4.478501e-50 | 2.510520e-47 |
| MsG0380011669.01 | MsG0780040579.01 | -0.813300 | 2.744019e-51 | 1.785225e-48 |
| MsG0380011704.01 | MsG0780040579.01 | -0.815735 | 7.937361e-52 | 5.517577e-49 |
| MsG0380012103.01 | MsG0780040579.01 | -0.824874 | 6.372232e-54 | 5.715886e-51 |
| MsG0380014173.01 | MsG0780040579.01 | -0.819470 | 1.141966e-52 | 8.796060e-50 |
| MsG0380014248.01 | MsG0780040579.01 | -0.827967 | 1.167557e-54 | 1.144720e-51 |
| MsG0380014703.01 | MsG0780040579.01 | -0.802415 | 5.672963e-49 | 2.777369e-46 |
| MsG0680031334.01 | MsG0780040579.01 | -0.806781 | 6.961860e-50 | 3.812027e-47 |
| MsG0680031355.01 | MsG0780040579.01 | -0.802321 | 5.931232e-49 | 2.896933e-46 |
| MsG0680031561.01 | MsG0780040579.01 | -0.815755 | 7.856390e-52 | 5.464253e-49 |
| MsG0680032157.01 | MsG0780040579.01 | -0.805595 | 1.237342e-49 | 6.572571e-47 |
| MsG0680032460.01 | MsG0780040579.01 | 0.821802 | 3.326574e-53 | 2.734321e-50 |
| MsG0680034913.01 | MsG0780040579.01 | -0.826319 | 2.895325e-54 | 2.706091e-51 |
| MsG0680035444.01 | MsG0780040579.01 | -0.830181 | 3.394154e-55 | 3.549628e-52 |
| MsG0480018778.01 | MsG0780040579.01 | -0.818409 | 1.990043e-52 | 1.488556e-49 |
| MsG0480018883.01 | MsG0780040579.01 | -0.802270 | 6.074437e-49 | 2.962905e-46 |
| MsG0480019434.01 | MsG0780040579.01 | -0.818881 | 1.554894e-52 | 1.178267e-49 |
| MsG0480019435.01 | MsG0780040579.01 | -0.814934 | 1.196034e-51 | 8.133199e-49 |
| MsG0480020447.01 | MsG0780040579.01 | -0.833007 | 6.827842e-56 | 7.762715e-53 |
| MsG0480020887.01 | MsG0780040579.01 | -0.804089 | 2.553690e-49 | 1.304950e-46 |
| MsG0480021041.01 | MsG0780040579.01 | -0.806134 | 9.531552e-50 | 5.133585e-47 |
| MsG0480021215.01 | MsG0780040579.01 | -0.824167 | 9.348426e-54 | 8.216673e-51 |
| MsG0480021465.01 | MsG0780040579.01 | -0.847994 | 8.131364e-60 | 1.470960e-56 |
| MsG0480021489.01 | MsG0780040579.01 | -0.804612 | 1.986927e-49 | 1.029068e-46 |
| MsG0480021501.01 | MsG0780040579.01 | -0.801965 | 7.018972e-49 | 3.396893e-46 |
| MsG0480021536.01 | MsG0780040579.01 | -0.812911 | 3.339758e-51 | 2.150083e-48 |
| MsG0480021750.01 | MsG0780040579.01 | -0.807152 | 5.811797e-50 | 3.213054e-47 |
| MsG0480021959.01 | MsG0780040579.01 | -0.807627 | 4.609193e-50 | 2.579841e-47 |
| MsG0480021994.01 | MsG0780040579.01 | -0.810294 | 1.237971e-50 | 7.433754e-48 |
| MsG0480022222.01 | MsG0780040579.01 | -0.801925 | 7.153780e-49 | 3.458741e-46 |
| MsG0480022750.01 | MsG0780040579.01 | -0.840161 | 1.027156e-57 | 1.450712e-54 |
| MsG0480022985.01 | MsG0780040579.01 | -0.816871 | 4.423297e-52 | 3.171773e-49 |
| MsG0480022986.01 | MsG0780040579.01 | -0.813936 | 1.988301e-51 | 1.316051e-48 |
| MsG0480023174.01 | MsG0780040579.01 | -0.825521 | 4.479726e-54 | 4.092707e-51 |
| MsG0480023248.01 | MsG0780040579.01 | -0.809561 | 1.780278e-50 | 1.048702e-47 |
| MsG0480023356.01 | MsG0780040579.01 | -0.813269 | 2.787831e-51 | 1.812141e-48 |
| MsG0480023357.01 | MsG0780040579.01 | -0.829474 | 5.044374e-55 | 5.168047e-52 |
| MsG0480023943.01 | MsG0780040579.01 | -0.802635 | 5.110354e-49 | 2.515861e-46 |
| MsG0480024005.01 | MsG0780040579.01 | -0.805926 | 1.054480e-49 | 5.649203e-47 |
| MsG0580024038.01 | MsG0780040579.01 | -0.800527 | 1.382130e-48 | 6.450013e-46 |
| MsG0580024197.01 | MsG0780040579.01 | -0.803714 | 3.056026e-49 | 1.546592e-46 |
| MsG0580024495.01 | MsG0780040579.01 | -0.813302 | 2.742049e-51 | 1.784018e-48 |
| MsG0580024935.01 | MsG0780040579.01 | -0.809728 | 1.639696e-50 | 9.701797e-48 |
| MsG0580025026.01 | MsG0780040579.01 | -0.806981 | 6.317763e-50 | 3.477321e-47 |
| MsG0580025406.01 | MsG0780040579.01 | -0.801511 | 8.699731e-49 | 4.162321e-46 |
| MsG0580025448.01 | MsG0780040579.01 | -0.831532 | 1.582610e-55 | 1.722316e-52 |
| MsG0580025467.01 | MsG0780040579.01 | -0.805846 | 1.096012e-49 | 5.859764e-47 |
| MsG0380014948.01 | MsG0780040579.01 | -0.800624 | 1.320619e-48 | 6.178197e-46 |
| MsG0380015166.01 | MsG0780040579.01 | -0.801289 | 9.658277e-49 | 4.595242e-46 |
| MsG0380015440.01 | MsG0780040579.01 | -0.803188 | 3.926506e-49 | 1.960568e-46 |
| MsG0380015555.01 | MsG0780040579.01 | -0.801220 | 9.978993e-49 | 4.739431e-46 |
| MsG0380015720.01 | MsG0780040579.01 | -0.806916 | 6.518517e-50 | 3.581823e-47 |
| MsG0380015930.01 | MsG0780040579.01 | -0.816491 | 5.381430e-52 | 3.818496e-49 |
| MsG0380016182.01 | MsG0780040579.01 | -0.807375 | 5.213576e-50 | 2.899043e-47 |
| MsG0380016581.01 | MsG0780040579.01 | -0.815808 | 7.647896e-52 | 5.326609e-49 |
| MsG0380016624.01 | MsG0780040579.01 | -0.805425 | 1.343188e-49 | 7.103745e-47 |
| MsG0380016694.01 | MsG0780040579.01 | -0.832962 | 7.008288e-56 | 7.956824e-53 |
| MsG0380016910.01 | MsG0780040579.01 | -0.815644 | 8.316118e-52 | 5.766397e-49 |
| MsG0380016923.01 | MsG0780040579.01 | -0.809684 | 1.675680e-50 | 9.903196e-48 |
| MsG0380017040.01 | MsG0780040579.01 | -0.800559 | 1.361852e-48 | 6.360553e-46 |
| MsG0380017048.01 | MsG0780040579.01 | -0.805303 | 1.424687e-49 | 7.511128e-47 |
| MsG0380017326.01 | MsG0780040579.01 | -0.800519 | 1.387358e-48 | 6.473196e-46 |
| MsG0380017543.01 | MsG0780040579.01 | -0.847356 | 1.217697e-59 | 2.158602e-56 |
| MsG0480018163.01 | MsG0780040579.01 | -0.818026 | 2.429440e-52 | 1.797944e-49 |
| MsG0480018236.01 | MsG0780040579.01 | -0.811029 | 8.586738e-51 | 5.258545e-48 |
| MsG0580026086.01 | MsG0780040579.01 | -0.850510 | 1.621221e-60 | 3.182767e-57 |
| MsG0580026137.01 | MsG0780040579.01 | -0.806440 | 8.218643e-50 | 4.461064e-47 |
| MsG0580026270.01 | MsG0780040579.01 | -0.808375 | 3.194254e-50 | 1.823454e-47 |
| MsG0580026340.01 | MsG0780040579.01 | -0.826813 | 2.207998e-54 | 2.093020e-51 |
| MsG0580027605.01 | MsG0780040579.01 | -0.801898 | 7.244005e-49 | 3.500114e-46 |
| MsG0580027939.01 | MsG0780040579.01 | -0.804244 | 2.370985e-49 | 1.216325e-46 |
| MsG0580027947.01 | MsG0780040579.01 | -0.805458 | 1.321834e-49 | 6.997026e-47 |
| MsG0580029376.01 | MsG0780040579.01 | -0.803047 | 4.199384e-49 | 2.089162e-46 |
| MsG0580029514.01 | MsG0780040579.01 | 0.802007 | 6.881042e-49 | 3.333805e-46 |
| MsG0580029925.01 | MsG0780040579.01 | -0.804711 | 1.894438e-49 | 9.837184e-47 |
| MsG0580029999.01 | MsG0780040579.01 | 0.805502 | 1.294221e-49 | 6.858258e-47 |
| MsG0580030142.01 | MsG0780040579.01 | -0.800016 | 1.756371e-48 | 8.090798e-46 |
| MsG0680030415.01 | MsG0780040579.01 | -0.813774 | 2.158729e-51 | 1.422595e-48 |
| MsG0280006491.01 | MsG0780040579.01 | -0.808361 | 3.216601e-50 | 1.835555e-47 |
| MsG0280006593.01 | MsG0780040579.01 | -0.811711 | 6.106235e-51 | 3.806978e-48 |
| MsG0280006678.01 | MsG0780040579.01 | -0.809745 | 1.625445e-50 | 9.622192e-48 |
| MsG0280006694.01 | MsG0780040579.01 | -0.833899 | 4.090374e-56 | 4.776736e-53 |
| MsG0280006937.01 | MsG0780040579.01 | -0.802881 | 4.544727e-49 | 2.251525e-46 |
| MsG0280007066.01 | MsG0780040579.01 | -0.820667 | 6.076360e-53 | 4.838152e-50 |
| MsG0280007547.01 | MsG0780040579.01 | -0.830427 | 2.955731e-55 | 3.112984e-52 |
| MsG0280007636.01 | MsG0780040579.01 | -0.805124 | 1.552978e-49 | 8.150240e-47 |
| MsG0280007955.01 | MsG0780040579.01 | -0.821574 | 3.756779e-53 | 3.067944e-50 |
| MsG0280008112.01 | MsG0780040579.01 | -0.805011 | 1.640130e-49 | 8.582327e-47 |
| MsG0280009024.01 | MsG0780040579.01 | -0.852432 | 4.634682e-61 | 9.682507e-58 |
| MsG0280009395.01 | MsG0780040579.01 | 0.809211 | 2.116464e-50 | 1.235173e-47 |
| MsG0280009533.01 | MsG0780040579.01 | -0.801195 | 1.009915e-48 | 4.793446e-46 |
| MsG0280009578.01 | MsG0780040579.01 | -0.806198 | 9.240414e-50 | 4.985035e-47 |
| MsG0280009598.01 | MsG0780040579.01 | -0.801584 | 8.405854e-49 | 4.028970e-46 |
| MsG0280010184.01 | MsG0780040579.01 | -0.806837 | 6.775994e-50 | 3.715740e-47 |
| MsG0280010216.01 | MsG0780040579.01 | -0.802301 | 5.986365e-49 | 2.922364e-46 |
| MsG0780035958.01 | MsG0780040579.01 | -0.829846 | 4.095100e-55 | 4.242227e-52 |
| MsG0780037141.01 | MsG0780040579.01 | -0.801827 | 7.491520e-49 | 3.613163e-46 |
| MsG0780038401.01 | MsG0780040579.01 | -0.811570 | 6.553104e-51 | 4.070553e-48 |
| MsG0780038439.01 | MsG0780040579.01 | -0.803153 | 3.992601e-49 | 1.991799e-46 |
| MsG0780038836.01 | MsG0780040579.01 | -0.851918 | 6.490851e-61 | 1.333839e-57 |
| MsG0780038906.01 | MsG0780040579.01 | -0.820732 | 5.871247e-53 | 4.683485e-50 |
| MsG0780039143.01 | MsG0780040579.01 | -0.806173 | 9.352675e-50 | 5.042429e-47 |
| MsG0780039144.01 | MsG0780040579.01 | -0.835109 | 2.031264e-56 | 2.459344e-53 |
| MsG0780039222.01 | MsG0780040579.01 | 0.810197 | 1.299430e-50 | 7.782910e-48 |
| MsG0780039867.01 | MsG0780040579.01 | 0.807360 | 5.251439e-50 | 2.918984e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040579.01.T02 | MTR_7g093200 | 88.608 | 79 | 9 | 0 | 20 | 98 | 328 | 406 | 7.19e-46 | 152 |
| MsG0780040579.01.T02 | MTR_1g054035 | 72.289 | 83 | 23 | 0 | 20 | 102 | 278 | 360 | 1.92e-40 | 137 |
| MsG0780040579.01.T02 | MTR_1g111880 | 71.951 | 82 | 23 | 0 | 21 | 102 | 261 | 342 | 6.39e-39 | 133 |
| MsG0780040579.01.T02 | MTR_5g071170 | 55.844 | 77 | 33 | 1 | 17 | 93 | 274 | 349 | 5.86e-23 | 91.3 |
| MsG0780040579.01.T02 | MTR_3g464330 | 55.844 | 77 | 33 | 1 | 17 | 93 | 265 | 340 | 6.65e-23 | 90.9 |
| MsG0780040579.01.T02 | MTR_4g015630 | 53.623 | 69 | 31 | 1 | 25 | 93 | 330 | 397 | 1.66e-20 | 84.7 |
| MsG0780040579.01.T02 | MTR_7g068780 | 56.250 | 64 | 27 | 1 | 25 | 88 | 336 | 398 | 6.88e-20 | 83.2 |
| MsG0780040579.01.T03 | MTR_7g093200 | 97.222 | 36 | 1 | 0 | 1 | 36 | 295 | 330 | 2.18e-17 | 73.2 |
| MsG0780040579.01.T03 | MTR_1g054035 | 80.556 | 36 | 7 | 0 | 1 | 36 | 245 | 280 | 1.67e-15 | 67.8 |
| MsG0780040579.01.T01 | MTR_7g093200 | 76.190 | 357 | 49 | 5 | 1 | 322 | 51 | 406 | 0.0 | 525 |
| MsG0780040579.01.T01 | MTR_1g054035 | 62.291 | 358 | 97 | 7 | 1 | 322 | 1 | 356 | 1.56e-142 | 408 |
| MsG0780040579.01.T01 | MTR_1g111880 | 50.418 | 359 | 116 | 8 | 1 | 322 | 5 | 338 | 1.47e-105 | 313 |
| MsG0780040579.01.T01 | MTR_5g071170 | 35.650 | 331 | 156 | 6 | 25 | 317 | 38 | 349 | 6.89e-52 | 176 |
| MsG0780040579.01.T01 | MTR_3g464330 | 35.404 | 322 | 169 | 9 | 25 | 317 | 29 | 340 | 1.04e-48 | 167 |
| MsG0780040579.01.T01 | MTR_7g068780 | 34.049 | 326 | 158 | 10 | 25 | 312 | 92 | 398 | 3.93e-47 | 165 |
| MsG0780040579.01.T01 | MTR_4g015630 | 35.238 | 315 | 169 | 7 | 25 | 312 | 86 | 392 | 7.83e-44 | 156 |
| MsG0780040579.01.T01 | MTR_7g068780 | 42.222 | 135 | 71 | 1 | 25 | 159 | 92 | 219 | 5.70e-28 | 111 |
| MsG0780040579.01.T01 | MTR_2g460790 | 24.138 | 319 | 173 | 11 | 32 | 310 | 106 | 395 | 3.24e-14 | 73.6 |
| MsG0780040579.01.T01 | MTR_4g130980 | 24.390 | 328 | 207 | 9 | 17 | 310 | 74 | 394 | 1.05e-13 | 72.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780040579.01.T02 | AT3G12120 | 91.549 | 71 | 6 | 0 | 20 | 90 | 277 | 347 | 3.06e-42 | 142 |
| MsG0780040579.01.T02 | AT3G12120 | 91.549 | 71 | 6 | 0 | 20 | 90 | 277 | 347 | 3.06e-42 | 142 |
| MsG0780040579.01.T02 | AT5G05580 | 56.522 | 69 | 29 | 1 | 25 | 93 | 327 | 394 | 4.29e-21 | 86.7 |
| MsG0780040579.01.T02 | AT3G11170 | 59.375 | 64 | 25 | 1 | 25 | 88 | 334 | 396 | 7.85e-21 | 85.9 |
| MsG0780040579.01.T02 | AT2G29980 | 59.375 | 64 | 25 | 1 | 25 | 88 | 272 | 334 | 1.04e-19 | 82.4 |
| MsG0780040579.01.T02 | AT5G05580 | 54.717 | 53 | 23 | 1 | 25 | 77 | 327 | 378 | 2.35e-13 | 64.7 |
| MsG0780040579.01.T03 | AT3G12120 | 68.571 | 35 | 11 | 0 | 2 | 36 | 245 | 279 | 3.12e-12 | 58.9 |
| MsG0780040579.01.T03 | AT3G12120 | 68.571 | 35 | 11 | 0 | 2 | 36 | 245 | 279 | 3.12e-12 | 58.9 |
| MsG0780040579.01.T01 | AT3G12120 | 63.610 | 349 | 90 | 6 | 1 | 314 | 1 | 347 | 1.96e-151 | 430 |
| MsG0780040579.01.T01 | AT3G12120 | 63.610 | 349 | 90 | 6 | 1 | 314 | 1 | 347 | 1.96e-151 | 430 |
| MsG0780040579.01.T01 | AT5G05580 | 35.952 | 331 | 173 | 7 | 16 | 317 | 74 | 394 | 1.85e-52 | 179 |
| MsG0780040579.01.T01 | AT3G11170 | 33.628 | 339 | 160 | 10 | 16 | 312 | 81 | 396 | 2.28e-50 | 173 |
| MsG0780040579.01.T01 | AT2G29980 | 36.522 | 345 | 163 | 12 | 6 | 312 | 8 | 334 | 5.87e-49 | 168 |
| MsG0780040579.01.T01 | AT5G05580 | 34.603 | 315 | 167 | 7 | 16 | 301 | 74 | 378 | 1.24e-44 | 157 |
| MsG0780040579.01.T01 | AT2G29980 | 41.290 | 155 | 83 | 2 | 6 | 159 | 8 | 155 | 1.41e-28 | 112 |
| MsG0780040579.01.T01 | AT4G30950 | 22.293 | 314 | 191 | 9 | 32 | 313 | 106 | 398 | 2.08e-13 | 70.9 |
Find 118 sgRNAs with CRISPR-Local
Find 134 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGGCAATAAAACCAATTT+TGG | 0.087341 | 7:+79463784 | MsG0780040579.01.T01:CDS |
| ACCTGGGTTGTGTGTGTTTA+TGG | 0.124901 | 7:+79463531 | MsG0780040579.01.T01:CDS |
| TCCTCGCCCTCTCTCTTTCT+TGG | 0.168598 | 7:+79463015 | MsG0780040579.01.T01:CDS |
| CGATAATAATCTCCCAAAAT+TGG | 0.209462 | 7:-79463797 | None:intergenic |
| TCTTGGCATGGCCTGCCTAC+TGG | 0.238207 | 7:+79463032 | MsG0780040579.01.T01:CDS |
| TGGGTTGTTGCTAAGGTATT+TGG | 0.245996 | 7:-79463290 | None:intergenic |
| CTCCATAATGCCTTGTAAAA+TGG | 0.258267 | 7:-79463834 | None:intergenic |
| TTGATCTGGCTGAGACTAAA+TGG | 0.275742 | 7:-79462872 | None:intergenic |
| GGAATACTTGCAGTGTGCTT+TGG | 0.282634 | 7:+79463477 | MsG0780040579.01.T01:intron |
| CTCTTGGCTGGCCCCTTACT+TGG | 0.282804 | 7:+79463347 | MsG0780040579.01.T01:CDS |
| GTTGCATTCTTACCGGTGTT+TGG | 0.301494 | 7:+79463065 | MsG0780040579.01.T01:CDS |
| GAAGAGCAGAGTGGAGAATA+AGG | 0.302342 | 7:-79463153 | None:intergenic |
| GAATACTTGCAGTGTGCTTT+GGG | 0.308616 | 7:+79463478 | MsG0780040579.01.T01:CDS |
| CTTGGCATGGCCTGCCTACT+GGG | 0.320968 | 7:+79463033 | MsG0780040579.01.T01:CDS |
| CCATGGCCAAAGGTCTTACC+TGG | 0.338971 | 7:+79463514 | MsG0780040579.01.T01:CDS |
| ATAGATGCTGGACTTCTGTT+TGG | 0.345381 | 7:-79463260 | None:intergenic |
| GCTTGTAGTCAATGGATTCT+TGG | 0.348788 | 7:+79463563 | MsG0780040579.01.T01:CDS |
| GTGGAATGGCTTTCTTGATC+TGG | 0.350001 | 7:-79462886 | None:intergenic |
| TTGCATTCTTACCGGTGTTT+GGG | 0.370496 | 7:+79463066 | MsG0780040579.01.T01:CDS |
| GCAACCGTTGACAGGGATTA+CGG | 0.380817 | 7:+79463668 | MsG0780040579.01.T01:CDS |
| ATCCAAGGTTGCATTCTTAC+CGG | 0.383885 | 7:+79463058 | MsG0780040579.01.T01:CDS |
| AGGAAGGTGCTGGAAGTAAT+AGG | 0.393878 | 7:-79462996 | None:intergenic |
| TATTGTGGAAGACCTTGTTC+AGG | 0.414861 | 7:-79463694 | None:intergenic |
| TGCCTAGTGGGTTGTTGCTA+AGG | 0.420443 | 7:-79463297 | None:intergenic |
| TAGATGCTGGACTTCTGTTT+GGG | 0.423886 | 7:-79463259 | None:intergenic |
| GGACTGGTTGAGAGGAGCTT+TGG | 0.429750 | 7:+79463646 | MsG0780040579.01.T01:CDS |
| GCCCTCTCTCTTTCTTGGCA+TGG | 0.433876 | 7:+79463020 | MsG0780040579.01.T01:CDS |
| GTTCCACTGCTTGTAGTCAA+TGG | 0.439920 | 7:+79463555 | MsG0780040579.01.T01:CDS |
| GAGCTTTGGCAACCGTTGAC+AGG | 0.441178 | 7:+79463660 | MsG0780040579.01.T01:CDS |
| TCAAATGGCACCCGTTTCAC+AGG | 0.447648 | 7:-79462842 | None:intergenic |
| CCGAACCTCTGTTCCTCCTT+CGG | 0.449015 | 7:+79462799 | MsG0780040579.01.T01:CDS |
| AAACAACATAGGAGAATGAA+TGG | 0.463243 | 7:-79462934 | None:intergenic |
| GGAATCGTAATGTGCAATGC+CGG | 0.465691 | 7:-79463615 | None:intergenic |
| AGAGAGGGCGAGGAAGGTGC+TGG | 0.467394 | 7:-79463006 | None:intergenic |
| AACAGAAGTCCAGCATCTAT+TGG | 0.469935 | 7:+79463263 | MsG0780040579.01.T01:CDS |
| AGAGAATGACCCTGTGAAAC+GGG | 0.471443 | 7:+79462832 | MsG0780040579.01.T01:CDS |
| TGTTGGAATGGTGGCGGCGA+TGG | 0.476615 | 7:-79463204 | None:intergenic |
| CACAACCCAGGTAAGACCTT+TGG | 0.483474 | 7:-79463520 | None:intergenic |
| AGAAAGAGAGAGGGCGAGGA+AGG | 0.487304 | 7:-79463012 | None:intergenic |
| TTTGGGAGATTATTATCGGT+TGG | 0.487437 | 7:+79463802 | MsG0780040579.01.T01:CDS |
| CTGTATTTCCATGAAAAGTA+AGG | 0.488098 | 7:-79463181 | None:intergenic |
| CAGAGAATGACCCTGTGAAA+CGG | 0.491132 | 7:+79462831 | MsG0780040579.01.T01:CDS |
| AGGTTGCTGAAGATGGGAGC+TGG | 0.495708 | 7:+79462773 | None:intergenic |
| AATAGGTGGCAACGTAATAG+AGG | 0.500007 | 7:-79462979 | None:intergenic |
| GCCAAGAAAGAGAGAGGGCG+AGG | 0.502849 | 7:-79463016 | None:intergenic |
| GAAACATTGAGAGCCAAGTA+AGG | 0.511751 | 7:-79463360 | None:intergenic |
| ATTACCATCACCCTCACTCT+TGG | 0.516387 | 7:+79463331 | MsG0780040579.01.T01:CDS |
| ACGATTCCTCTGAGTGGGAC+TGG | 0.523608 | 7:+79463630 | MsG0780040579.01.T01:CDS |
| CCATCACCCTCACTCTTGGC+TGG | 0.525576 | 7:+79463335 | MsG0780040579.01.T01:CDS |
| CGAGAGAACCAGTGTTGGAA+TGG | 0.526614 | 7:-79463216 | None:intergenic |
| CTTAAAACAGTGAGGTGGAA+TGG | 0.530569 | 7:-79462900 | None:intergenic |
| TGGGCTTTACCATCTTGCCA+TGG | 0.531736 | 7:+79463497 | MsG0780040579.01.T01:CDS |
| TACCATCTTGCCATGGCCAA+AGG | 0.532398 | 7:+79463504 | MsG0780040579.01.T01:CDS |
| ATGCATTCAGTGACTATCAA+TGG | 0.532817 | 7:+79463113 | MsG0780040579.01.T01:CDS |
| GAATCGTAATGTGCAATGCC+GGG | 0.535425 | 7:-79463614 | None:intergenic |
| CACCGGTAAGAATGCAACCT+TGG | 0.536943 | 7:-79463060 | None:intergenic |
| GGCCATGCCAAGAAAGAGAG+AGG | 0.537304 | 7:-79463022 | None:intergenic |
| CCGAAGGAGGAACAGAGGTT+CGG | 0.538906 | 7:-79462799 | None:intergenic |
| TGGTGAGGACTCTGCCTAGT+GGG | 0.542219 | 7:-79463309 | None:intergenic |
| TCTGAGTGGGACTGGTTGAG+AGG | 0.543952 | 7:+79463638 | MsG0780040579.01.T01:CDS |
| CCTGCCTACTGGGCTATCCA+AGG | 0.546166 | 7:+79463043 | MsG0780040579.01.T01:CDS |
| CCTTGGATAGCCCAGTAGGC+AGG | 0.549828 | 7:-79463043 | None:intergenic |
| TTTGGAGTACCAATAGATGC+TGG | 0.551082 | 7:-79463272 | None:intergenic |
| ACATTACGATTCCTCTGAGT+GGG | 0.559414 | 7:+79463625 | MsG0780040579.01.T01:CDS |
| CGCCGCCACCATTCCAACAC+TGG | 0.559519 | 7:+79463208 | MsG0780040579.01.T01:CDS |
| TTCTCTGACTTCCTAGCCGA+AGG | 0.561382 | 7:-79462815 | None:intergenic |
| GCCATGCCAAGAAAGAGAGA+GGG | 0.562344 | 7:-79463021 | None:intergenic |
| CAAATGGCACCCGTTTCACA+GGG | 0.563114 | 7:-79462841 | None:intergenic |
| GACCTTTGGCCATGGCAAGA+TGG | 0.564496 | 7:-79463506 | None:intergenic |
| AGCTTTGGCAACCGTTGACA+GGG | 0.565749 | 7:+79463661 | MsG0780040579.01.T01:CDS |
| CATGAGTGTCTGTAATATTG+TGG | 0.568101 | 7:-79463709 | None:intergenic |
| AACCAGTGTTGGAATGGTGG+CGG | 0.568578 | 7:-79463210 | None:intergenic |
| CAATGGCTTGATGACACAGT+TGG | 0.569230 | 7:+79463130 | MsG0780040579.01.T01:CDS |
| AAGAGTGAGGGTGATGGTAA+TGG | 0.577915 | 7:-79463329 | None:intergenic |
| GAGAACCAGTGTTGGAATGG+TGG | 0.578252 | 7:-79463213 | None:intergenic |
| GTAATAGAGGAAGAAGGCTA+TGG | 0.580245 | 7:-79462966 | None:intergenic |
| CCTCTGTTCCTCCTTCGGCT+AGG | 0.582186 | 7:+79462804 | MsG0780040579.01.T01:CDS |
| TGGGTCATTGCACATGAGTG+TGG | 0.585000 | 7:+79463085 | MsG0780040579.01.T01:CDS |
| GCCTCCATTGCATGATAATG+TGG | 0.587261 | 7:-79463758 | None:intergenic |
| AAACATTGAGAGCCAAGTAA+GGG | 0.587397 | 7:-79463359 | None:intergenic |
| TCATGCAATGGAGGCTACCA+AGG | 0.589000 | 7:+79463766 | MsG0780040579.01.T01:CDS |
| CCTCTCGAGAGAACCAGTGT+TGG | 0.591079 | 7:-79463221 | None:intergenic |
| CCAGGTAAGACCTTTGGCCA+TGG | 0.599714 | 7:-79463514 | None:intergenic |
| CAACACTGGTTCTCTCGAGA+GGG | 0.601058 | 7:+79463222 | MsG0780040579.01.T01:CDS |
| ATGGTGAGGACTCTGCCTAG+TGG | 0.601259 | 7:-79463310 | None:intergenic |
| CATGGCCAAAGGTCTTACCT+GGG | 0.604062 | 7:+79463515 | MsG0780040579.01.T01:CDS |
| TAAGGGGCCAGCCAAGAGTG+AGG | 0.608169 | 7:-79463342 | None:intergenic |
| GCAACCTTGGATAGCCCAGT+AGG | 0.609261 | 7:-79463047 | None:intergenic |
| GGTGAGGTCATAAACAACAT+AGG | 0.610689 | 7:-79462945 | None:intergenic |
| CCAGCCAAGAGTGAGGGTGA+TGG | 0.614753 | 7:-79463335 | None:intergenic |
| TCTGACTTCCTAGCCGAAGG+AGG | 0.619871 | 7:-79462812 | None:intergenic |
| AATCCATTGACTACAAGCAG+TGG | 0.623001 | 7:-79463558 | None:intergenic |
| CCAACACTGGTTCTCTCGAG+AGG | 0.624813 | 7:+79463221 | MsG0780040579.01.T01:CDS |
| TCCATAAACACACACAACCC+AGG | 0.628038 | 7:-79463532 | None:intergenic |
| AAGGGGCCAGCCAAGAGTGA+GGG | 0.628897 | 7:-79463341 | None:intergenic |
| GGCAACGTAATAGAGGAAGA+AGG | 0.631803 | 7:-79462972 | None:intergenic |
| AATGCCACATTATCATGCAA+TGG | 0.633031 | 7:+79463754 | MsG0780040579.01.T01:CDS |
| GCCACATTATCATGCAATGG+AGG | 0.633822 | 7:+79463757 | MsG0780040579.01.T01:CDS |
| TACCTTAGCAACAACCCACT+AGG | 0.642926 | 7:+79463295 | MsG0780040579.01.T01:CDS |
| TTGCTGAAGATGGGAGCTGG+TGG | 0.643245 | 7:+79462776 | None:intergenic |
| CACATTACGATTCCTCTGAG+TGG | 0.646981 | 7:+79463624 | MsG0780040579.01.T01:CDS |
| ATTGATAGTCACTGAATGCA+TGG | 0.657583 | 7:-79463111 | None:intergenic |
| GAGCGCTTAAAACAGTGAGG+TGG | 0.659884 | 7:-79462905 | None:intergenic |
| ATGTGCAATGACCCAAACAC+CGG | 0.662992 | 7:-79463077 | None:intergenic |
| CAATATTACAGACACTCATG+TGG | 0.663012 | 7:+79463712 | MsG0780040579.01.T01:CDS |
| AACATTGAGAGCCAAGTAAG+GGG | 0.667854 | 7:-79463358 | None:intergenic |
| TGCATGATAATGTGGCATTG+TGG | 0.668075 | 7:-79463750 | None:intergenic |
| TCTCAACCAGTCCCACTCAG+AGG | 0.673811 | 7:-79463636 | None:intergenic |
| GATTCCGTAATCCCTGTCAA+CGG | 0.680193 | 7:-79463672 | None:intergenic |
| TGAGGGTGATGGTAATGGTG+AGG | 0.680817 | 7:-79463324 | None:intergenic |
| GGATTACGGAATCCTGAACA+AGG | 0.686478 | 7:+79463682 | MsG0780040579.01.T01:CDS |
| AGAGGAAGAAGGCTATGGTG+AGG | 0.694680 | 7:-79462961 | None:intergenic |
| AAGGTGCTGGAAGTAATAGG+TGG | 0.697490 | 7:-79462993 | None:intergenic |
| CCTAGCCGAAGGAGGAACAG+AGG | 0.707032 | 7:-79462804 | None:intergenic |
| AAGGCACAAGAAGAGCAGAG+TGG | 0.708399 | 7:-79463162 | None:intergenic |
| ATCTGGCTGAGACTAAATGG+AGG | 0.708633 | 7:-79462869 | None:intergenic |
| ACAGAGCGCTTAAAACAGTG+AGG | 0.748360 | 7:-79462908 | None:intergenic |
| GATAGTCACTGAATGCATGG+TGG | 0.772836 | 7:-79463108 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGGCAATAAAACCAATTTT+GGG | + | Chr7:79463785-79463804 | MsG0780040579.01.T01:CDS | 25.0% |
| !!! | CAATTTTGGGAGATTATTAT+CGG | + | Chr7:79463798-79463817 | MsG0780040579.01.T01:CDS | 25.0% |
| AAACAACATAGGAGAATGAA+TGG | - | Chr7:79462937-79462956 | None:intergenic | 30.0% | |
| CAAATATATGTATCAGATGC+AGG | + | Chr7:79463456-79463475 | MsG0780040579.01.T01:intron | 30.0% | |
| CGATAATAATCTCCCAAAAT+TGG | - | Chr7:79463800-79463819 | None:intergenic | 30.0% | |
| CTGTATTTCCATGAAAAGTA+AGG | - | Chr7:79463184-79463203 | None:intergenic | 30.0% | |
| ! | CAAGGCAATAAAACCAATTT+TGG | + | Chr7:79463784-79463803 | MsG0780040579.01.T01:CDS | 30.0% |
| ! | GATGAAAACACCATTTTACA+AGG | + | Chr7:79463824-79463843 | MsG0780040579.01.T01:CDS | 30.0% |
| !!! | CAAAATTGGTTTTATTGCCT+TGG | - | Chr7:79463786-79463805 | None:intergenic | 30.0% |
| AAACATTGAGAGCCAAGTAA+GGG | - | Chr7:79463362-79463381 | None:intergenic | 35.0% | |
| AATGCCACATTATCATGCAA+TGG | + | Chr7:79463754-79463773 | MsG0780040579.01.T01:CDS | 35.0% | |
| ATGCATTCAGTGACTATCAA+TGG | + | Chr7:79463113-79463132 | MsG0780040579.01.T01:CDS | 35.0% | |
| CAATATTACAGACACTCATG+TGG | + | Chr7:79463712-79463731 | MsG0780040579.01.T01:CDS | 35.0% | |
| CATGAGTGTCTGTAATATTG+TGG | - | Chr7:79463712-79463731 | None:intergenic | 35.0% | |
| CTCCATAATGCCTTGTAAAA+TGG | - | Chr7:79463837-79463856 | None:intergenic | 35.0% | |
| TGGCAAGCAAATCTATCATA+AGG | - | Chr7:79463393-79463412 | None:intergenic | 35.0% | |
| TTTGGGAGATTATTATCGGT+TGG | + | Chr7:79463802-79463821 | MsG0780040579.01.T01:CDS | 35.0% | |
| ! | ATTGATAGTCACTGAATGCA+TGG | - | Chr7:79463114-79463133 | None:intergenic | 35.0% |
| ! | CTAAATGGAGGCTTTTCAAA+TGG | - | Chr7:79462860-79462879 | None:intergenic | 35.0% |
| !! | CACCATTTTACAAGGCATTA+TGG | + | Chr7:79463832-79463851 | MsG0780040579.01.T01:CDS | 35.0% |
| !! | TTCTTGTGCCTTACTTTTCA+TGG | + | Chr7:79463173-79463192 | MsG0780040579.01.T01:CDS | 35.0% |
| AACAGAAGTCCAGCATCTAT+TGG | + | Chr7:79463263-79463282 | MsG0780040579.01.T01:CDS | 40.0% | |
| AACATTGAGAGCCAAGTAAG+GGG | - | Chr7:79463361-79463380 | None:intergenic | 40.0% | |
| AATAGGTGGCAACGTAATAG+AGG | - | Chr7:79462982-79463001 | None:intergenic | 40.0% | |
| ACATTACGATTCCTCTGAGT+GGG | + | Chr7:79463625-79463644 | MsG0780040579.01.T01:CDS | 40.0% | |
| ACGTTCACGATCTGAGTAAA+TGG | - | Chr7:79463433-79463452 | None:intergenic | 40.0% | |
| ATAGATGCTGGACTTCTGTT+TGG | - | Chr7:79463263-79463282 | None:intergenic | 40.0% | |
| ATCCAAGGTTGCATTCTTAC+CGG | + | Chr7:79463058-79463077 | MsG0780040579.01.T01:CDS | 40.0% | |
| CGTTCACGATCTGAGTAAAT+GGG | - | Chr7:79463432-79463451 | None:intergenic | 40.0% | |
| CTTAAAACAGTGAGGTGGAA+TGG | - | Chr7:79462903-79462922 | None:intergenic | 40.0% | |
| GAAACATTGAGAGCCAAGTA+AGG | - | Chr7:79463363-79463382 | None:intergenic | 40.0% | |
| GAATACTTGCAGTGTGCTTT+GGG | + | Chr7:79463478-79463497 | MsG0780040579.01.T01:CDS | 40.0% | |
| GGTGAGGTCATAAACAACAT+AGG | - | Chr7:79462948-79462967 | None:intergenic | 40.0% | |
| GTAATAGAGGAAGAAGGCTA+TGG | - | Chr7:79462969-79462988 | None:intergenic | 40.0% | |
| TAGATGCTGGACTTCTGTTT+GGG | - | Chr7:79463262-79463281 | None:intergenic | 40.0% | |
| TATTGTGGAAGACCTTGTTC+AGG | - | Chr7:79463697-79463716 | None:intergenic | 40.0% | |
| TTGATCTGGCTGAGACTAAA+TGG | - | Chr7:79462875-79462894 | None:intergenic | 40.0% | |
| TTGCATTCTTACCGGTGTTT+GGG | + | Chr7:79463066-79463085 | MsG0780040579.01.T01:CDS | 40.0% | |
| ! | AATCCATTGACTACAAGCAG+TGG | - | Chr7:79463561-79463580 | None:intergenic | 40.0% |
| ! | ATTTTTGCAGCATACTCACC+CGG | + | Chr7:79463596-79463615 | MsG0780040579.01.T01:CDS | 40.0% |
| ! | GCTTGTAGTCAATGGATTCT+TGG | + | Chr7:79463563-79463582 | MsG0780040579.01.T01:CDS | 40.0% |
| ! | TACTTGGCTCTCAATGTTTC+AGG | + | Chr7:79463363-79463382 | MsG0780040579.01.T01:intron | 40.0% |
| ! | TGCATGATAATGTGGCATTG+TGG | - | Chr7:79463753-79463772 | None:intergenic | 40.0% |
| ! | TGGGTTGTTGCTAAGGTATT+TGG | - | Chr7:79463293-79463312 | None:intergenic | 40.0% |
| ! | TTTGGAGTACCAATAGATGC+TGG | - | Chr7:79463275-79463294 | None:intergenic | 40.0% |
| ACCTGGGTTGTGTGTGTTTA+TGG | + | Chr7:79463531-79463550 | MsG0780040579.01.T01:CDS | 45.0% | |
| AGAGAATGACCCTGTGAAAC+GGG | + | Chr7:79462832-79462851 | MsG0780040579.01.T01:CDS | 45.0% | |
| ATCTGGCTGAGACTAAATGG+AGG | - | Chr7:79462872-79462891 | None:intergenic | 45.0% | |
| ATGTGCAATGACCCAAACAC+CGG | - | Chr7:79463080-79463099 | None:intergenic | 45.0% | |
| ATTACCATCACCCTCACTCT+TGG | + | Chr7:79463331-79463350 | MsG0780040579.01.T01:CDS | 45.0% | |
| CACATTACGATTCCTCTGAG+TGG | + | Chr7:79463624-79463643 | MsG0780040579.01.T01:CDS | 45.0% | |
| CAGAGAATGACCCTGTGAAA+CGG | + | Chr7:79462831-79462850 | MsG0780040579.01.T01:CDS | 45.0% | |
| CTGAGTAAATGGGACCATGT+GGG | - | Chr7:79463422-79463441 | None:intergenic | 45.0% | |
| GAAGAGCAGAGTGGAGAATA+AGG | - | Chr7:79463156-79463175 | None:intergenic | 45.0% | |
| GAATCGTAATGTGCAATGCC+GGG | - | Chr7:79463617-79463636 | None:intergenic | 45.0% | |
| GATAGTCACTGAATGCATGG+TGG | - | Chr7:79463111-79463130 | None:intergenic | 45.0% | |
| GATTCCGTAATCCCTGTCAA+CGG | - | Chr7:79463675-79463694 | None:intergenic | 45.0% | |
| GCCACATTATCATGCAATGG+AGG | + | Chr7:79463757-79463776 | MsG0780040579.01.T01:CDS | 45.0% | |
| GGAATACTTGCAGTGTGCTT+TGG | + | Chr7:79463477-79463496 | MsG0780040579.01.T01:intron | 45.0% | |
| GGAATCGTAATGTGCAATGC+CGG | - | Chr7:79463618-79463637 | None:intergenic | 45.0% | |
| GGATTACGGAATCCTGAACA+AGG | + | Chr7:79463682-79463701 | MsG0780040579.01.T01:CDS | 45.0% | |
| GGCAACGTAATAGAGGAAGA+AGG | - | Chr7:79462975-79462994 | None:intergenic | 45.0% | |
| GTGGAATGGCTTTCTTGATC+TGG | - | Chr7:79462889-79462908 | None:intergenic | 45.0% | |
| GTTCCACTGCTTGTAGTCAA+TGG | + | Chr7:79463555-79463574 | MsG0780040579.01.T01:CDS | 45.0% | |
| GTTGCATTCTTACCGGTGTT+TGG | + | Chr7:79463065-79463084 | MsG0780040579.01.T01:CDS | 45.0% | |
| TACCTTAGCAACAACCCACT+AGG | + | Chr7:79463295-79463314 | MsG0780040579.01.T01:CDS | 45.0% | |
| TCCATAAACACACACAACCC+AGG | - | Chr7:79463535-79463554 | None:intergenic | 45.0% | |
| TCTGAGTAAATGGGACCATG+TGG | - | Chr7:79463423-79463442 | None:intergenic | 45.0% | |
| ! | AAGAGTGAGGGTGATGGTAA+TGG | - | Chr7:79463332-79463351 | None:intergenic | 45.0% |
| ! | ACAGAGCGCTTAAAACAGTG+AGG | - | Chr7:79462911-79462930 | None:intergenic | 45.0% |
| ! | CAATGGCTTGATGACACAGT+TGG | + | Chr7:79463130-79463149 | MsG0780040579.01.T01:CDS | 45.0% |
| ! | GCCTCCATTGCATGATAATG+TGG | - | Chr7:79463761-79463780 | None:intergenic | 45.0% |
| !! | AAGGTGCTGGAAGTAATAGG+TGG | - | Chr7:79462996-79463015 | None:intergenic | 45.0% |
| !! | AGGAAGGTGCTGGAAGTAAT+AGG | - | Chr7:79462999-79463018 | None:intergenic | 45.0% |
| AAGGCACAAGAAGAGCAGAG+TGG | - | Chr7:79463165-79463184 | None:intergenic | 50.0% | |
| AGAGGAAGAAGGCTATGGTG+AGG | - | Chr7:79462964-79462983 | None:intergenic | 50.0% | |
| CAAATGGCACCCGTTTCACA+GGG | - | Chr7:79462844-79462863 | None:intergenic | 50.0% | |
| CACAACCCAGGTAAGACCTT+TGG | - | Chr7:79463523-79463542 | None:intergenic | 50.0% | |
| CACCGGTAAGAATGCAACCT+TGG | - | Chr7:79463063-79463082 | None:intergenic | 50.0% | |
| CATGGCCAAAGGTCTTACCT+GGG | + | Chr7:79463515-79463534 | MsG0780040579.01.T01:CDS | 50.0% | |
| GAGCGCTTAAAACAGTGAGG+TGG | - | Chr7:79462908-79462927 | None:intergenic | 50.0% | |
| GCAACCGTTGACAGGGATTA+CGG | + | Chr7:79463668-79463687 | MsG0780040579.01.T01:CDS | 50.0% | |
| GCCATGCCAAGAAAGAGAGA+GGG | - | Chr7:79463024-79463043 | None:intergenic | 50.0% | |
| TACCATCTTGCCATGGCCAA+AGG | + | Chr7:79463504-79463523 | MsG0780040579.01.T01:CDS | 50.0% | |
| TCAAATGGCACCCGTTTCAC+AGG | - | Chr7:79462845-79462864 | None:intergenic | 50.0% | |
| TCATGCAATGGAGGCTACCA+AGG | + | Chr7:79463766-79463785 | MsG0780040579.01.T01:CDS | 50.0% | |
| TGGCTCTCAATGTTTCAGGC+AGG | + | Chr7:79463367-79463386 | MsG0780040579.01.T01:intron | 50.0% | |
| TGGGCTTTACCATCTTGCCA+TGG | + | Chr7:79463497-79463516 | MsG0780040579.01.T01:CDS | 50.0% | |
| TGGGTCATTGCACATGAGTG+TGG | + | Chr7:79463085-79463104 | MsG0780040579.01.T01:CDS | 50.0% | |
| TTCTCTGACTTCCTAGCCGA+AGG | - | Chr7:79462818-79462837 | None:intergenic | 50.0% | |
| ! | AACCAGTGTTGGAATGGTGG+CGG | - | Chr7:79463213-79463232 | None:intergenic | 50.0% |
| ! | AGCTTTGGCAACCGTTGACA+GGG | + | Chr7:79463661-79463680 | MsG0780040579.01.T01:CDS | 50.0% |
| ! | CGAGAGAACCAGTGTTGGAA+TGG | - | Chr7:79463219-79463238 | None:intergenic | 50.0% |
| ! | GAGAACCAGTGTTGGAATGG+TGG | - | Chr7:79463216-79463235 | None:intergenic | 50.0% |
| ! | TGGGACCATGTGGGTTAAAG+TGG | - | Chr7:79463413-79463432 | None:intergenic | 50.0% |
| !! | CAACACTGGTTCTCTCGAGA+GGG | + | Chr7:79463222-79463241 | MsG0780040579.01.T01:CDS | 50.0% |
| !! | GCTTGCCACTTTAACCCACA+TGG | + | Chr7:79463405-79463424 | MsG0780040579.01.T01:intron | 50.0% |
| !! | TGAGGGTGATGGTAATGGTG+AGG | - | Chr7:79463327-79463346 | None:intergenic | 50.0% |
| !! | TGCCTAGTGGGTTGTTGCTA+AGG | - | Chr7:79463300-79463319 | None:intergenic | 50.0% |
| ACGATTCCTCTGAGTGGGAC+TGG | + | Chr7:79463630-79463649 | MsG0780040579.01.T01:CDS | 55.0% | |
| AGAAAGAGAGAGGGCGAGGA+AGG | - | Chr7:79463015-79463034 | None:intergenic | 55.0% | |
| ATGGTGAGGACTCTGCCTAG+TGG | - | Chr7:79463313-79463332 | None:intergenic | 55.0% | |
| CCAGGTAAGACCTTTGGCCA+TGG | - | Chr7:79463517-79463536 | None:intergenic | 55.0% | |
| CCATGGCCAAAGGTCTTACC+TGG | + | Chr7:79463514-79463533 | MsG0780040579.01.T01:CDS | 55.0% | |
| CCGAACCTCTGTTCCTCCTT+CGG | + | Chr7:79462799-79462818 | MsG0780040579.01.T01:CDS | 55.0% | |
| CCGAAGGAGGAACAGAGGTT+CGG | - | Chr7:79462802-79462821 | None:intergenic | 55.0% | |
| CCTCTCGAGAGAACCAGTGT+TGG | - | Chr7:79463224-79463243 | None:intergenic | 55.0% | |
| GACCTTTGGCCATGGCAAGA+TGG | - | Chr7:79463509-79463528 | None:intergenic | 55.0% | |
| GCAACCTTGGATAGCCCAGT+AGG | - | Chr7:79463050-79463069 | None:intergenic | 55.0% | |
| GCCCTCTCTCTTTCTTGGCA+TGG | + | Chr7:79463020-79463039 | MsG0780040579.01.T01:CDS | 55.0% | |
| GGCCATGCCAAGAAAGAGAG+AGG | - | Chr7:79463025-79463044 | None:intergenic | 55.0% | |
| TCCTCGCCCTCTCTCTTTCT+TGG | + | Chr7:79463015-79463034 | MsG0780040579.01.T01:CDS | 55.0% | |
| TCTCAACCAGTCCCACTCAG+AGG | - | Chr7:79463639-79463658 | None:intergenic | 55.0% | |
| TCTGACTTCCTAGCCGAAGG+AGG | - | Chr7:79462815-79462834 | None:intergenic | 55.0% | |
| TGGTGAGGACTCTGCCTAGT+GGG | - | Chr7:79463312-79463331 | None:intergenic | 55.0% | |
| ! | GAGCTTTGGCAACCGTTGAC+AGG | + | Chr7:79463660-79463679 | MsG0780040579.01.T01:CDS | 55.0% |
| !! | CCAACACTGGTTCTCTCGAG+AGG | + | Chr7:79463221-79463240 | MsG0780040579.01.T01:CDS | 55.0% |
| !! | GGACTGGTTGAGAGGAGCTT+TGG | + | Chr7:79463646-79463665 | MsG0780040579.01.T01:CDS | 55.0% |
| !! | TCTGAGTGGGACTGGTTGAG+AGG | + | Chr7:79463638-79463657 | MsG0780040579.01.T01:CDS | 55.0% |
| AAGGGGCCAGCCAAGAGTGA+GGG | - | Chr7:79463344-79463363 | None:intergenic | 60.0% | |
| CCAGCCAAGAGTGAGGGTGA+TGG | - | Chr7:79463338-79463357 | None:intergenic | 60.0% | |
| CCATCACCCTCACTCTTGGC+TGG | + | Chr7:79463335-79463354 | MsG0780040579.01.T01:CDS | 60.0% | |
| CCTAGCCGAAGGAGGAACAG+AGG | - | Chr7:79462807-79462826 | None:intergenic | 60.0% | |
| CCTCTGTTCCTCCTTCGGCT+AGG | + | Chr7:79462804-79462823 | MsG0780040579.01.T01:CDS | 60.0% | |
| CCTGCCTACTGGGCTATCCA+AGG | + | Chr7:79463043-79463062 | MsG0780040579.01.T01:CDS | 60.0% | |
| CCTTGGATAGCCCAGTAGGC+AGG | - | Chr7:79463046-79463065 | None:intergenic | 60.0% | |
| CTTGGCATGGCCTGCCTACT+GGG | + | Chr7:79463033-79463052 | MsG0780040579.01.T01:CDS | 60.0% | |
| GCCAAGAAAGAGAGAGGGCG+AGG | - | Chr7:79463019-79463038 | None:intergenic | 60.0% | |
| TAAGGGGCCAGCCAAGAGTG+AGG | - | Chr7:79463345-79463364 | None:intergenic | 60.0% | |
| TCTTGGCATGGCCTGCCTAC+TGG | + | Chr7:79463032-79463051 | MsG0780040579.01.T01:CDS | 60.0% | |
| ! | CTCTTGGCTGGCCCCTTACT+TGG | + | Chr7:79463347-79463366 | MsG0780040579.01.T01:CDS | 60.0% |
| !! | TGTTGGAATGGTGGCGGCGA+TGG | - | Chr7:79463207-79463226 | None:intergenic | 60.0% |
| CGCCGCCACCATTCCAACAC+TGG | + | Chr7:79463208-79463227 | MsG0780040579.01.T01:CDS | 65.0% | |
| ! | AGAGAGGGCGAGGAAGGTGC+TGG | - | Chr7:79463009-79463028 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 79462785 | 79463865 | 79462785 | ID=MsG0780040579.01;Name=MsG0780040579.01 |
| Chr7 | mRNA | 79462785 | 79463865 | 79462785 | ID=MsG0780040579.01.T01;Parent=MsG0780040579.01;Name=MsG0780040579.01.T01;_AED=0.48;_eAED=0.48;_QI=0|0|0|1|0|0|2|0|326 |
| Chr7 | exon | 79462785 | 79463377 | 79462785 | ID=MsG0780040579.01.T01:exon:16362;Parent=MsG0780040579.01.T01 |
| Chr7 | exon | 79463478 | 79463865 | 79463478 | ID=MsG0780040579.01.T01:exon:16363;Parent=MsG0780040579.01.T01 |
| Chr7 | CDS | 79462785 | 79463377 | 79462785 | ID=MsG0780040579.01.T01:cds;Parent=MsG0780040579.01.T01 |
| Chr7 | CDS | 79463478 | 79463865 | 79463478 | ID=MsG0780040579.01.T01:cds;Parent=MsG0780040579.01.T01 |
| Chr7 | mRNA | 79463557 | 79463865 | 79463557 | ID=MsG0780040579.01.T02;Parent=MsG0780040579.01;Name=MsG0780040579.01.T02;_AED=0.49;_eAED=0.49;_QI=0|-1|0|1|-1|0|1|0|102 |
| Chr7 | exon | 79463557 | 79463865 | 79463557 | ID=MsG0780040579.01.T02:exon:16364;Parent=MsG0780040579.01.T02 |
| Chr7 | CDS | 79463557 | 79463865 | 79463557 | ID=MsG0780040579.01.T02:cds;Parent=MsG0780040579.01.T02 |
| Chr7 | mRNA | 79463516 | 79463656 | 79463516 | ID=MsG0780040579.01.T03;Parent=MsG0780040579.01;Name=MsG0780040579.01.T03;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|0|1|0|46 |
| Chr7 | exon | 79463516 | 79463656 | 79463516 | ID=MsG0780040579.01.T03:exon:16365;Parent=MsG0780040579.01.T03 |
| Chr7 | CDS | 79463516 | 79463656 | 79463516 | ID=MsG0780040579.01.T03:cds;Parent=MsG0780040579.01.T03 |
| Gene Sequence |
| Protein sequence |
