AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480021215.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480021215.01.T01 MTR_4g069090 97.849 93 2 0 25 117 665 757 4.15e-52 174
MsG0480021215.01.T02 MTR_4g069090 97.849 93 2 0 25 117 665 757 4.15e-52 174
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480021215.01.T01 AT3G18860 71.739 92 26 0 25 116 669 760 5.53e-36 129
MsG0480021215.01.T01 AT3G18860 71.739 92 26 0 25 116 669 760 8.17e-36 129
MsG0480021215.01.T02 AT3G18860 71.739 92 26 0 25 116 669 760 5.53e-36 129
MsG0480021215.01.T02 AT3G18860 71.739 92 26 0 25 116 669 760 8.17e-36 129

Find 15 sgRNAs with CRISPR-Local

Find 369 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTAATAACCCAAAAGTAAT+TGG 0.188672 4:+55250334 None:intergenic
AAGCTGAATCCAATTACTTT+TGG 0.209562 4:-55250343 MsG0480021215.01.T01:exon
GCATCAAATGCAGAGTTAAT+TGG 0.288447 4:-55250162 MsG0480021215.01.T01:three_prime_UTR
AATGCAGAGTTAATTGGAAT+TGG 0.308994 4:-55250156 MsG0480021215.01.T01:three_prime_UTR
AGATCCTACTTCAGCAATCT+TGG 0.375918 4:+55250389 None:intergenic
AAAAGCAGCAAAGGGTTCTA+AGG 0.399602 4:-55250415 MsG0480021215.01.T01:CDS
TGTGTGCACGTGTCTGATTA+TGG 0.415268 4:+55250242 None:intergenic
GTGTGCACGTGTCTGATTAT+GGG 0.482045 4:+55250243 None:intergenic
AAATGTATTGAATAATGAAA+GGG 0.499473 4:+55250214 None:intergenic
AGCATTGCAAAAGCAGCAAA+GGG 0.507494 4:-55250423 MsG0480021215.01.T01:CDS
GAGCATTGCAAAAGCAGCAA+AGG 0.509606 4:-55250424 MsG0480021215.01.T01:CDS
AAAATGTATTGAATAATGAA+AGG 0.526216 4:+55250213 None:intergenic
GTTAAATAGATTGTCAGAGA+TGG 0.540202 4:+55249979 None:intergenic
GACTCCAAGATTGCTGAAGT+AGG 0.638044 4:-55250393 MsG0480021215.01.T01:CDS
TAATCAGACACGTGCACACA+TGG 0.638294 4:-55250239 MsG0480021215.01.T01:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTCTATAACAATATATAAA+GGG + Chr4:55247763-55247782 None:intergenic 10.0%
!! TATTCTATAACAATATATAA+AGG + Chr4:55247764-55247783 None:intergenic 10.0%
!!! AAAAGATAAACATATTTTAT+AGG - Chr4:55248933-55248952 MsG0480021215.01.T01:intron 10.0%
!!! AAAGATAAACATATTTTATA+GGG - Chr4:55248934-55248953 MsG0480021215.01.T01:intron 10.0%
!!! TACTACTTTATTAATTTTTT+GGG + Chr4:55252217-55252236 None:intergenic 10.0%
!!! TGGTAAATTTAATTTTATAT+GGG - Chr4:55250293-55250312 MsG0480021215.01.T01:three_prime_UTR 10.0%
!!! TTACTACTTTATTAATTTTT+TGG + Chr4:55252218-55252237 None:intergenic 10.0%
!!! TTGGTAAATTTAATTTTATA+TGG - Chr4:55250292-55250311 MsG0480021215.01.T01:three_prime_UTR 10.0%
!! AAAATGTATTGAATAATGAA+AGG + Chr4:55250139-55250158 None:intergenic 15.0%
!! AAATGTATTGAATAATGAAA+GGG + Chr4:55250138-55250157 None:intergenic 15.0%
!! AATCAGACATTAAAATAAAA+TGG + Chr4:55250768-55250787 None:intergenic 15.0%
!! AGATATAGTATATAATACAT+AGG + Chr4:55251816-55251835 None:intergenic 15.0%
!! AGTTTGAAAATAATTAATAG+TGG + Chr4:55249563-55249582 None:intergenic 15.0%
!! TAGTAAGTAATGAATTAATA+GGG + Chr4:55247820-55247839 None:intergenic 15.0%
!! TTAGTAAGTAATGAATTAAT+AGG + Chr4:55247821-55247840 None:intergenic 15.0%
!! TTCTATAACAATATATAAAG+GGG + Chr4:55247762-55247781 None:intergenic 15.0%
!!! AAGTAATAGGAATATTTTAT+TGG + Chr4:55247792-55247811 None:intergenic 15.0%
!!! ACTACTTTATTAATTTTTTG+GGG + Chr4:55252216-55252235 None:intergenic 15.0%
!!! CAAGAATCTTTAATTTATTA+AGG + Chr4:55252673-55252692 None:intergenic 15.0%
!!! TACCATGTATAATTTTTTTA+GGG - Chr4:55251788-55251807 MsG0480021215.01.T01:intron 15.0%
!!! TATTAGTTTTAAATTTAGAC+AGG - Chr4:55250674-55250693 MsG0480021215.01.T01:intron 15.0%
!!! TATTGATTTTTCTTTAGTAT+TGG - Chr4:55250273-55250292 MsG0480021215.01.T01:three_prime_UTR 15.0%
!!! TGTAAAATTAGTTTTTTGAA+AGG + Chr4:55247475-55247494 None:intergenic 15.0%
!!! TTTTGTTACTTTTAGTTTTA+GGG + Chr4:55248917-55248936 None:intergenic 15.0%
!! AAATTGGAGATTACATATAA+TGG + Chr4:55249032-55249051 None:intergenic 20.0%
!! AACAAAAACAAAATGCATAT+TGG + Chr4:55249200-55249219 None:intergenic 20.0%
!! AACAAAATGATTTCTCATTA+AGG - Chr4:55248435-55248454 MsG0480021215.01.T01:intron 20.0%
!! AATAAATGAATTGGATAATC+AGG + Chr4:55249433-55249452 None:intergenic 20.0%
!! AATAATTGGACAATATCATT+TGG - Chr4:55249500-55249519 MsG0480021215.01.T01:intron 20.0%
!! AGAACAAATAATTTCAATGT+GGG + Chr4:55251474-55251493 None:intergenic 20.0%
!! AGGAAAATAGTTTAAATGAA+GGG - Chr4:55247697-55247716 MsG0480021215.01.T01:intron 20.0%
!! ATACAATTTACTGAACTTAT+TGG - Chr4:55252270-55252289 MsG0480021215.01.T01:intron 20.0%
!! ATTAATAACCCAAAAGTAAT+TGG + Chr4:55250018-55250037 None:intergenic 20.0%
!! ATTCTGTTAATTATGAGATA+TGG + Chr4:55251035-55251054 None:intergenic 20.0%
!! CAATTGTTTATATAACTCTT+AGG + Chr4:55252471-55252490 None:intergenic 20.0%
!! GAAATTCTGATGTTAAAATA+TGG - Chr4:55250547-55250566 MsG0480021215.01.T01:intron 20.0%
!! TAGAACAAATAATTTCAATG+TGG + Chr4:55251475-55251494 None:intergenic 20.0%
!! TAGGAAAATAGTTTAAATGA+AGG - Chr4:55247696-55247715 MsG0480021215.01.T01:intron 20.0%
!! TCAAATTTCGAAAAAAATGA+AGG - Chr4:55250046-55250065 MsG0480021215.01.T01:three_prime_UTR 20.0%
!! TCACAAATTAGCAATATTTA+GGG + Chr4:55249059-55249078 None:intergenic 20.0%
!! TGAAAATAATTAATAGTGGT+GGG + Chr4:55249559-55249578 None:intergenic 20.0%
!! TTGAAAATAATTAATAGTGG+TGG + Chr4:55249560-55249579 None:intergenic 20.0%
!!! AAAATAATTTTAGCTTGTCT+AGG + Chr4:55247941-55247960 None:intergenic 20.0%
!!! AAATAATTTTAGCTTGTCTA+GGG + Chr4:55247940-55247959 None:intergenic 20.0%
!!! ACCATGTATAATTTTTTTAG+GGG - Chr4:55251789-55251808 MsG0480021215.01.T01:intron 20.0%
!!! AGAAAAACACTTTTTAAAGA+AGG + Chr4:55251268-55251287 None:intergenic 20.0%
!!! CATCTTGTTCTAATTTTATT+TGG + Chr4:55250856-55250875 None:intergenic 20.0%
!!! CTACCATGTATAATTTTTTT+AGG - Chr4:55251787-55251806 MsG0480021215.01.T01:intron 20.0%
!!! CTTATTGGTTAAAATAAAAG+CGG - Chr4:55252285-55252304 MsG0480021215.01.T01:intron 20.0%
!!! CTTTTGTTACTTTTAGTTTT+AGG + Chr4:55248918-55248937 None:intergenic 20.0%
!!! GTGTCGATAAATAAATATAA+TGG - Chr4:55251758-55251777 MsG0480021215.01.T01:intron 20.0%
!!! TGAAAGTTTTTTAAGCTTAA+AGG + Chr4:55247560-55247579 None:intergenic 20.0%
!!! TTTAAGCTTAAAGGTATATA+GGG + Chr4:55247551-55247570 None:intergenic 20.0%
!!! TTTAATTTTATATGGGTAGT+CGG - Chr4:55250300-55250319 MsG0480021215.01.T01:three_prime_UTR 20.0%
!!! TTTCTCATTAAGGATTTTTT+CGG - Chr4:55248445-55248464 MsG0480021215.01.T01:intron 20.0%
!!! TTTGGTTTTTTTTTTTTGCT+TGG - Chr4:55248021-55248040 MsG0480021215.01.T01:intron 20.0%
!!! TTTTAAGCTTAAAGGTATAT+AGG + Chr4:55247552-55247571 None:intergenic 20.0%
!!! TTTTTGGTCTCTTTTTTTAT+TGG - Chr4:55251932-55251951 MsG0480021215.01.T01:intron 20.0%
! AACAAATAATTTCAATGTGG+GGG + Chr4:55251472-55251491 None:intergenic 25.0%
! AACTACTGATAAGGATATTA+TGG - Chr4:55247607-55247626 MsG0480021215.01.T01:intron 25.0%
! AAGAATATTCTTTATCCCTA+AGG - Chr4:55252503-55252522 MsG0480021215.01.T01:intron 25.0%
! AATCCAATAAAGAAGATAGA+GGG + Chr4:55252427-55252446 None:intergenic 25.0%
! ACTACTGATAAGGATATTAT+GGG - Chr4:55247608-55247627 MsG0480021215.01.T01:intron 25.0%
! AGAAATGAGAGAAAAAAATG+AGG - Chr4:55251714-55251733 MsG0480021215.01.T01:intron 25.0%
! AGTTTGATTCAGATGATTAA+CGG - Chr4:55252381-55252400 MsG0480021215.01.T01:intron 25.0%
! ATAAACAATTGTTTATGCGT+GGG - Chr4:55252480-55252499 MsG0480021215.01.T01:intron 25.0%
! ATGAACCTAAATTTATTTGC+TGG + Chr4:55252845-55252864 None:intergenic 25.0%
! ATGCTCATTGAATACTTAAA+TGG + Chr4:55248757-55248776 None:intergenic 25.0%
! ATTAAGTATAGACAGTAAAG+CGG - Chr4:55248078-55248097 MsG0480021215.01.T01:intron 25.0%
! CAAGGAAACAAAACTTATTT+AGG + Chr4:55247989-55248008 None:intergenic 25.0%
! CAATATTTAGGGGTTAAAAT+TGG + Chr4:55249048-55249067 None:intergenic 25.0%
! CACAAATTAGCAATATTTAG+GGG + Chr4:55249058-55249077 None:intergenic 25.0%
! CAGACATTAAAATAAAATGG+TGG + Chr4:55250765-55250784 None:intergenic 25.0%
! CTCCATTTGCTTAAAATAAT+TGG - Chr4:55249486-55249505 MsG0480021215.01.T01:intron 25.0%
! GAACAAATAATTTCAATGTG+GGG + Chr4:55251473-55251492 None:intergenic 25.0%
! GCAAAATGATTGTAGAAATA+TGG + Chr4:55251893-55251912 None:intergenic 25.0%
! GTAAATGTCAATTAAGGATT+GGG + Chr4:55250633-55250652 None:intergenic 25.0%
! GTCACAAATTAGCAATATTT+AGG + Chr4:55249060-55249079 None:intergenic 25.0%
! GTTTAAATGAAGGGTAAAAT+TGG - Chr4:55247706-55247725 MsG0480021215.01.T01:intron 25.0%
! TAATCCAATAAAGAAGATAG+AGG + Chr4:55252428-55252447 None:intergenic 25.0%
! TAATTAAGCTAGCTATCAAA+GGG - Chr4:55248719-55248738 MsG0480021215.01.T01:intron 25.0%
! TAGAACGGTAATAAATGAAT+TGG + Chr4:55249442-55249461 None:intergenic 25.0%
! TAGTATAGAATTGTTGTGTT+GGG - Chr4:55248993-55249012 MsG0480021215.01.T01:intron 25.0%
! TAGTTGAACAAAAATCTTTG+TGG + Chr4:55252251-55252270 None:intergenic 25.0%
! TATAAACAATTGTTTATGCG+TGG - Chr4:55252479-55252498 MsG0480021215.01.T01:intron 25.0%
! TCCCCTAAAAAAATTATACA+TGG + Chr4:55251793-55251812 None:intergenic 25.0%
! TGAATCCAGCAAATAAATTT+AGG - Chr4:55252837-55252856 MsG0480021215.01.T01:intron 25.0%
! TGTTAATTATGAGATATGGA+AGG + Chr4:55251031-55251050 None:intergenic 25.0%
! TGTTTGCACAATAAAAGATT+AGG - Chr4:55252338-55252357 MsG0480021215.01.T01:intron 25.0%
! TTAGCTAGACAATTAAAACT+AGG - Chr4:55250887-55250906 MsG0480021215.01.T01:intron 25.0%
!! AGATACATAAAAGTATGTAG+TGG - Chr4:55249531-55249550 MsG0480021215.01.T01:intron 25.0%
!! ATTTTCCTGCATATATAGTT+AGG + Chr4:55251129-55251148 None:intergenic 25.0%
!! CTTAATTCTTTTTACAAGCT+TGG + Chr4:55252754-55252773 None:intergenic 25.0%
!! GATACATAAAAGTATGTAGT+GGG - Chr4:55249532-55249551 MsG0480021215.01.T01:intron 25.0%
!! TGATTTTATTAATCAGCTAG+TGG - Chr4:55250783-55250802 MsG0480021215.01.T01:intron 25.0%
!! TTCGTATAGTGTAAATCTTT+TGG + Chr4:55252623-55252642 None:intergenic 25.0%
!!! AATTTGAGGACATTAGTTTT+TGG + Chr4:55248832-55248851 None:intergenic 25.0%
!!! ATCTTGTGACATTTTTTGTT+TGG - Chr4:55250332-55250351 MsG0480021215.01.T01:three_prime_UTR 25.0%
!!! ATTAAGGATTTTTTCGGTAT+CGG - Chr4:55248451-55248470 MsG0480021215.01.T01:intron 25.0%
!!! ATTATTTTAAGCAAATGGAG+AGG + Chr4:55249486-55249505 None:intergenic 25.0%
!!! ATTTGAGGACATTAGTTTTT+GGG + Chr4:55248831-55248850 None:intergenic 25.0%
!!! GAAATTTATGTTTTGAGAGT+TGG - Chr4:55251736-55251755 MsG0480021215.01.T01:intron 25.0%
!!! GTCCAATTATTTTAAGCAAA+TGG + Chr4:55249491-55249510 None:intergenic 25.0%
!!! TACAGGTTTTGTTCTATATT+TGG + Chr4:55248635-55248654 None:intergenic 25.0%
!!! TGCGATTTTTCTTTAATTTG+AGG + Chr4:55248846-55248865 None:intergenic 25.0%
AAATATGGAGGGTTTATGAA+AGG + Chr4:55247872-55247891 None:intergenic 30.0%
AATGAAGGGTAAAATTGGAA+AGG - Chr4:55247711-55247730 MsG0480021215.01.T01:intron 30.0%
AATGCAGAGTTAATTGGAAT+TGG - Chr4:55250193-55250212 MsG0480021215.01.T01:three_prime_UTR 30.0%
AATTAAGCTAGCTATCAAAG+GGG - Chr4:55248720-55248739 MsG0480021215.01.T01:intron 30.0%
ACCAACGTAAATGTCAATTA+AGG + Chr4:55250639-55250658 None:intergenic 30.0%
AGCAAAACATGACAAAAGTA+GGG + Chr4:55248596-55248615 None:intergenic 30.0%
AGCATGACGATAAAGAAATA+GGG + Chr4:55251062-55251081 None:intergenic 30.0%
AGTCCTCAAATTGAAGAAAA+AGG - Chr4:55248873-55248892 MsG0480021215.01.T01:intron 30.0%
ATAATTGAAGAACCCTTGAT+GGG - Chr4:55247579-55247598 MsG0480021215.01.T01:intron 30.0%
ATCCAATAAAGAAGATAGAG+GGG + Chr4:55252426-55252445 None:intergenic 30.0%
ATGAGTAACCATAACCTTTA+AGG + Chr4:55252882-55252901 None:intergenic 30.0%
ATGATAGATATGTGTTTGGA+GGG - Chr4:55251652-55251671 MsG0480021215.01.T01:intron 30.0%
ATGGAAGGAAAGGAAAAAAA+CGG + Chr4:55251016-55251035 None:intergenic 30.0%
ATTATGAGATATGGAAGGAA+AGG + Chr4:55251026-55251045 None:intergenic 30.0%
ATTGAATCTAAGGATCAAGA+AGG - Chr4:55248255-55248274 MsG0480021215.01.T01:intron 30.0%
CAAACTATGAATGTGATACA+CGG - Chr4:55251501-55251520 MsG0480021215.01.T01:intron 30.0%
CGTAAATGTCAATTAAGGAT+TGG + Chr4:55250634-55250653 None:intergenic 30.0%
CTAATTAAGCTAGCTATCAA+AGG - Chr4:55248718-55248737 MsG0480021215.01.T01:intron 30.0%
CTAGTATAGAATTGTTGTGT+TGG - Chr4:55248992-55249011 MsG0480021215.01.T01:intron 30.0%
GAAACTCTTAATGTTGCATT+TGG - Chr4:55248516-55248535 MsG0480021215.01.T01:intron 30.0%
GGATTTGACAATGAAAAGTT+TGG + Chr4:55249847-55249866 None:intergenic 30.0%
GTCTAACCTTTATACTCTAA+GGG - Chr4:55252646-55252665 MsG0480021215.01.T01:intron 30.0%
GTTAAATAGATTGTCAGAGA+TGG + Chr4:55250373-55250392 None:intergenic 30.0%
TACCAAATGCTTTAACTGTT+TGG + Chr4:55250974-55250993 None:intergenic 30.0%
TAGCATGACGATAAAGAAAT+AGG + Chr4:55251063-55251082 None:intergenic 30.0%
TCCAAACACATATCTATCAT+CGG + Chr4:55251652-55251671 None:intergenic 30.0%
TCCTTAATTGACATTTACGT+TGG - Chr4:55250635-55250654 MsG0480021215.01.T01:intron 30.0%
TCTTCAATTTGAGGACTATT+AGG + Chr4:55248870-55248889 None:intergenic 30.0%
TCTTGTGAAAAAAATAGCAC+TGG - Chr4:55249889-55249908 MsG0480021215.01.T01:intron 30.0%
TGTCTAACCTTTATACTCTA+AGG - Chr4:55252645-55252664 MsG0480021215.01.T01:intron 30.0%
TTATGGTTACTCATAGTAAC+TGG - Chr4:55252888-55252907 MsG0480021215.01.T01:intron 30.0%
! AAATCTTTTGGATGACAGTT+TGG + Chr4:55252611-55252630 None:intergenic 30.0%
! AACCATAACCTTTAAGGATT+AGG + Chr4:55252876-55252895 None:intergenic 30.0%
! AAGCTGAATCCAATTACTTT+TGG - Chr4:55250006-55250025 MsG0480021215.01.T01:three_prime_UTR 30.0%
! AATCTTTTGGATGACAGTTT+GGG + Chr4:55252610-55252629 None:intergenic 30.0%
! ACCATAACCTTTAAGGATTA+GGG + Chr4:55252875-55252894 None:intergenic 30.0%
! AGTGCTATTGATTGAATCTA+AGG - Chr4:55248245-55248264 MsG0480021215.01.T01:intron 30.0%
! ATACATTTTGTATCTGTGAC+TGG - Chr4:55250150-55250169 MsG0480021215.01.T01:three_prime_UTR 30.0%
! TAATAGGGTGTCTAAGTAAT+AGG + Chr4:55247805-55247824 None:intergenic 30.0%
! TACATTTTGTATCTGTGACT+GGG - Chr4:55250151-55250170 MsG0480021215.01.T01:three_prime_UTR 30.0%
! TAGTTTTCTTAACAAGTGTG+GGG + Chr4:55248975-55248994 None:intergenic 30.0%
! TCTTTTTACAAGCTTGGTTA+AGG + Chr4:55252748-55252767 None:intergenic 30.0%
! TGATAGCTAGCTTAATTAGA+GGG + Chr4:55248717-55248736 None:intergenic 30.0%
! TGTCCTTTTTCTTCAATTTG+AGG + Chr4:55248879-55248898 None:intergenic 30.0%
! TTACAGACATCAAGATGTTT+TGG - Chr4:55252108-55252127 MsG0480021215.01.T01:CDS 30.0%
! TTCATAAACCCTCCATATTT+TGG - Chr4:55247872-55247891 MsG0480021215.01.T01:intron 30.0%
! TTCCAAACAGTTAAAGCATT+TGG - Chr4:55250969-55250988 MsG0480021215.01.T01:intron 30.0%
! TTGATAGCTAGCTTAATTAG+AGG + Chr4:55248718-55248737 None:intergenic 30.0%
! TTTTGGGCAAAACCAAAATA+TGG + Chr4:55247887-55247906 None:intergenic 30.0%
!! AGCTGAATCCAATTACTTTT+GGG - Chr4:55250007-55250026 MsG0480021215.01.T01:three_prime_UTR 30.0%
!! CTAGTTTTCTTAACAAGTGT+GGG + Chr4:55248976-55248995 None:intergenic 30.0%
!! TTACCAAGTGTTCTAAGTTT+TGG + Chr4:55248355-55248374 None:intergenic 30.0%
!!! AACTACTGATAAGGGTATTT+TGG + Chr4:55247904-55247923 None:intergenic 30.0%
!!! AAGTTTTGTTTCCTTGAATG+TGG - Chr4:55247993-55248012 MsG0480021215.01.T01:intron 30.0%
!!! ACTACTGATAAGGGTATTTT+GGG + Chr4:55247903-55247922 None:intergenic 30.0%
!!! ACTAGTTTTCTTAACAAGTG+TGG + Chr4:55248977-55248996 None:intergenic 30.0%
!!! AGTTTTGTTTCCTTGAATGT+GGG - Chr4:55247994-55248013 MsG0480021215.01.T01:intron 30.0%
!!! GTCTTACACTATTTTTACCT+GGG - Chr4:55248313-55248332 MsG0480021215.01.T01:intron 30.0%
!!! TGTATCTCATCGACTTTTTT+GGG - Chr4:55249304-55249323 MsG0480021215.01.T01:intron 30.0%
!!! TGTCTTACACTATTTTTACC+TGG - Chr4:55248312-55248331 MsG0480021215.01.T01:intron 30.0%
AAACTTATTTAGGCCCAGTT+TGG + Chr4:55247979-55247998 None:intergenic 35.0%
AAGGAAAAATCCAGCTCAAA+AGG - Chr4:55247730-55247749 MsG0480021215.01.T01:intron 35.0%
AAGGATTGGGTTTCTTTCTA+TGG + Chr4:55250620-55250639 None:intergenic 35.0%
AAGTTTCATATCCTAGTCAG+TGG - Chr4:55249688-55249707 MsG0480021215.01.T01:intron 35.0%
AATCAGCTAGTGGCAATAAA+AGG - Chr4:55250793-55250812 MsG0480021215.01.T01:intron 35.0%
AATCATGTGCACCAAAACAA+AGG + Chr4:55249718-55249737 None:intergenic 35.0%
AATTGGATTATATGCAGTCG+AGG - Chr4:55250445-55250464 MsG0480021215.01.T01:CDS 35.0%
ACAAGTTAACAGGTCATTGA+TGG - Chr4:55250708-55250727 MsG0480021215.01.T01:intron 35.0%
ACAATTGATCGCTTATTTGC+GGG + Chr4:55251199-55251218 None:intergenic 35.0%
ACCACTATTGAAATACAAGG+GGG - Chr4:55250819-55250838 MsG0480021215.01.T01:intron 35.0%
ACCCTAATCCTTAAAGGTTA+TGG - Chr4:55252871-55252890 MsG0480021215.01.T01:intron 35.0%
ACCTATTAGCAAAAACTGCT+GGG - Chr4:55249658-55249677 MsG0480021215.01.T01:intron 35.0%
AGCAACTAAAGCACGAAATT+TGG + Chr4:55249257-55249276 None:intergenic 35.0%
AGGAAAAATCCAGCTCAAAA+GGG - Chr4:55247731-55247750 MsG0480021215.01.T01:intron 35.0%
AGGAGTAATCTGATATCCTT+AGG + Chr4:55252522-55252541 None:intergenic 35.0%
AGTCCCTGACAAAAGAAATA+AGG + Chr4:55251409-55251428 None:intergenic 35.0%
ATAGACGTGTGTTAATCAGT+GGG - Chr4:55250422-55250441 MsG0480021215.01.T01:CDS 35.0%
ATATAGTTAGGCAACACTAC+AGG + Chr4:55251117-55251136 None:intergenic 35.0%
ATATTATGGGAATCCCCATA+TGG - Chr4:55247621-55247640 MsG0480021215.01.T01:intron 35.0%
ATCAGCTAGTGGCAATAAAA+GGG - Chr4:55250794-55250813 MsG0480021215.01.T01:intron 35.0%
ATCCCCTCTATCTTCTTTAT+TGG - Chr4:55252421-55252440 MsG0480021215.01.T01:intron 35.0%
ATCTCTCCAAATGGAAGAAA+TGG - Chr4:55249597-55249616 MsG0480021215.01.T01:intron 35.0%
ATGTTGAATATTCACGTGTG+TGG + Chr4:55251562-55251581 None:intergenic 35.0%
ATTAAGCTAGCTATCAAAGG+GGG - Chr4:55248721-55248740 MsG0480021215.01.T01:intron 35.0%
ATTCTTGCAACTTGTCCAAA+GGG + Chr4:55249758-55249777 None:intergenic 35.0%
CAAAACATGTTGAGGTCAAA+TGG + Chr4:55252582-55252601 None:intergenic 35.0%
CAACTTAGTTATGGCAGTTA+AGG + Chr4:55252542-55252561 None:intergenic 35.0%
CACAATTGATCGCTTATTTG+CGG + Chr4:55251200-55251219 None:intergenic 35.0%
CACATCAACTACATATGAGT+AGG - Chr4:55251309-55251328 MsG0480021215.01.T01:intron 35.0%
CACCACTATTGAAATACAAG+GGG - Chr4:55250818-55250837 MsG0480021215.01.T01:intron 35.0%
CAGCAAAACATGACAAAAGT+AGG + Chr4:55248597-55248616 None:intergenic 35.0%
CATAATTGAAGAACCCTTGA+TGG - Chr4:55247578-55247597 MsG0480021215.01.T01:intron 35.0%
CCAAACACATATCTATCATC+GGG + Chr4:55251651-55251670 None:intergenic 35.0%
CCACCACTATTGAAATACAA+GGG - Chr4:55250817-55250836 MsG0480021215.01.T01:intron 35.0%
CTTCCATAATGTAGACCAAA+CGG - Chr4:55251344-55251363 MsG0480021215.01.T01:intron 35.0%
CTTGAAACCCTAATCCTTAA+AGG - Chr4:55252865-55252884 MsG0480021215.01.T01:intron 35.0%
CTTTCATAAACCGTCCATAT+GGG + Chr4:55247638-55247657 None:intergenic 35.0%
GAAATGGAGAGACTAATAGA+TGG - Chr4:55249613-55249632 MsG0480021215.01.T01:intron 35.0%
GATGATAGATATGTGTTTGG+AGG - Chr4:55251651-55251670 MsG0480021215.01.T01:intron 35.0%
GCATCAAATGCAGAGTTAAT+TGG - Chr4:55250187-55250206 MsG0480021215.01.T01:three_prime_UTR 35.0%
GGAGTAATCTGATATCCTTA+GGG + Chr4:55252521-55252540 None:intergenic 35.0%
GGCTAAATTTACTAGTGAGT+AGG - Chr4:55247677-55247696 MsG0480021215.01.T01:intron 35.0%
GTTATTGCATGCTTACATTG+TGG + Chr4:55248195-55248214 None:intergenic 35.0%
TAAGGACCCTTAGAGTATAA+AGG + Chr4:55252655-55252674 None:intergenic 35.0%
TATAGACGTGTGTTAATCAG+TGG - Chr4:55250421-55250440 MsG0480021215.01.T01:CDS 35.0%
TATCTCAAGAGTAGTACTCT+TGG + Chr4:55248492-55248511 None:intergenic 35.0%
TATGCATAGAGGTCTATTAG+AGG + Chr4:55250948-55250967 None:intergenic 35.0%
TCACCAAAACTTAGAACACT+TGG - Chr4:55248349-55248368 MsG0480021215.01.T01:intron 35.0%
TGGCTTTCACAACTTAGTTA+TGG + Chr4:55252551-55252570 None:intergenic 35.0%
TGTTGCCTAACTATATATGC+AGG - Chr4:55251121-55251140 MsG0480021215.01.T01:CDS 35.0%
TTTCATAAACCGTCCATATG+GGG + Chr4:55247637-55247656 None:intergenic 35.0%
TTTGATCTTAGTCGGTGATT+GGG - Chr4:55252168-55252187 MsG0480021215.01.T01:CDS 35.0%
! AAAGCACGAAATTTGGAATC+AGG + Chr4:55249250-55249269 None:intergenic 35.0%
! AAATTTAGACAGGTTAGCCA+AGG - Chr4:55250684-55250703 MsG0480021215.01.T01:intron 35.0%
! AATCATTTTGCGACAACCTT+TGG - Chr4:55251902-55251921 MsG0480021215.01.T01:intron 35.0%
! ACATTTTGTATCTGTGACTG+GGG - Chr4:55250152-55250171 MsG0480021215.01.T01:three_prime_UTR 35.0%
! AGTTTTTCTGTAAGTCAAGC+TGG - Chr4:55249344-55249363 MsG0480021215.01.T01:intron 35.0%
! ATCATTTTGCGACAACCTTT+GGG - Chr4:55251903-55251922 MsG0480021215.01.T01:intron 35.0%
! CTACTCATATGTAGTTGATG+TGG + Chr4:55251311-55251330 None:intergenic 35.0%
! CTTTTCAAACAGATGCTTGA+GGG - Chr4:55249866-55249885 MsG0480021215.01.T01:intron 35.0%
! GAAAAAAACGGTGCTTTGAA+GGG + Chr4:55251004-55251023 None:intergenic 35.0%
! GAGAAAAGAGAGTATAAGTG+AGG + Chr4:55251590-55251609 None:intergenic 35.0%
! GTGTCTTTTATCTCTCCAAA+TGG - Chr4:55249588-55249607 MsG0480021215.01.T01:intron 35.0%
!! AGCACCTTATTTCTTTTGTC+AGG - Chr4:55251402-55251421 MsG0480021215.01.T01:intron 35.0%
!! GCACCTTATTTCTTTTGTCA+GGG - Chr4:55251403-55251422 MsG0480021215.01.T01:intron 35.0%
!! GGAGCTTTAGTTTGGAATAA+TGG + Chr4:55249093-55249112 None:intergenic 35.0%
!! TGAAACAAACCATGCTGTTT+TGG - Chr4:55251162-55251181 MsG0480021215.01.T01:intron 35.0%
!! TGTTTTTGTTCAGATTGTCG+AGG - Chr4:55249210-55249229 MsG0480021215.01.T01:intron 35.0%
!!! AACCTTTGGGACAACATTTT+TGG - Chr4:55251916-55251935 MsG0480021215.01.T01:intron 35.0%
!!! AGGACATTAGTTTTTGGGAT+TGG + Chr4:55248826-55248845 None:intergenic 35.0%
!!! ATTAGTTTTTGGGATTGGGT+GGG + Chr4:55248821-55248840 None:intergenic 35.0%
!!! CTGTATCTCATCGACTTTTT+TGG - Chr4:55249303-55249322 MsG0480021215.01.T01:intron 35.0%
!!! GGACATTAGTTTTTGGGATT+GGG + Chr4:55248825-55248844 None:intergenic 35.0%
AAAAGCAGCAAAGGGTTCTA+AGG - Chr4:55249934-55249953 MsG0480021215.01.T01:intron 40.0%
AAGTATAGACAGTAAAGCGG+TGG - Chr4:55248081-55248100 MsG0480021215.01.T01:intron 40.0%
ACCCGATGTTTGATCTTAGT+CGG - Chr4:55252160-55252179 MsG0480021215.01.T01:CDS 40.0%
ACCGACTAAGATCAAACATC+GGG + Chr4:55252164-55252183 None:intergenic 40.0%
ACTCGTTAGCAACAGTAGAA+CGG + Chr4:55249457-55249476 None:intergenic 40.0%
AGAATTGTTGTGTTGGGAAG+TGG - Chr4:55248999-55249018 MsG0480021215.01.T01:intron 40.0%
AGAGAAGTTATGGTGTCTGA+CGG + Chr4:55251628-55251647 None:intergenic 40.0%
AGATCCTACTTCAGCAATCT+TGG + Chr4:55249963-55249982 None:intergenic 40.0%
AGCATTGCAAAAGCAGCAAA+GGG - Chr4:55249926-55249945 MsG0480021215.01.T01:intron 40.0%
ATGGACGGTTTATGAAAGGA+AGG - Chr4:55247640-55247659 MsG0480021215.01.T01:intron 40.0%
ATGGAGGGTTTATGAAAGGA+AGG + Chr4:55247868-55247887 None:intergenic 40.0%
CAAGACAGAACAGAACATAC+AGG + Chr4:55248652-55248671 None:intergenic 40.0%
CAAGGTTGTCTGATCAAGAT+CGG + Chr4:55250578-55250597 None:intergenic 40.0%
CATTCTTGCAACTTGTCCAA+AGG + Chr4:55249759-55249778 None:intergenic 40.0%
CCATATGGACGGTTTATGAA+AGG - Chr4:55247636-55247655 MsG0480021215.01.T01:intron 40.0%
CCCGATGATAGATATGTGTT+TGG - Chr4:55251648-55251667 MsG0480021215.01.T01:intron 40.0%
CCCTTGTATTTCAATAGTGG+TGG + Chr4:55250820-55250839 None:intergenic 40.0%
CCTCAAGCATCTGTTTGAAA+AGG + Chr4:55249868-55249887 None:intergenic 40.0%
CCTTTCATAAACCGTCCATA+TGG + Chr4:55247639-55247658 None:intergenic 40.0%
CTGTCTATACTTAATGCAGC+CGG + Chr4:55248073-55248092 None:intergenic 40.0%
GACCAAAAATGTTGTCCCAA+AGG + Chr4:55251921-55251940 None:intergenic 40.0%
GACCTATTAGCAAAAACTGC+TGG - Chr4:55249657-55249676 MsG0480021215.01.T01:intron 40.0%
GAGAAGGCAACTACTGATAA+GGG + Chr4:55247912-55247931 None:intergenic 40.0%
GAGGATCACATCAAAAGTCA+AGG + Chr4:55248217-55248236 None:intergenic 40.0%
GCCACCACTATTGAAATACA+AGG - Chr4:55250816-55250835 MsG0480021215.01.T01:intron 40.0%
GGAAAAAAACGGTGCTTTGA+AGG + Chr4:55251005-55251024 None:intergenic 40.0%
GGGCAAAACCAAAATATGGA+GGG + Chr4:55247883-55247902 None:intergenic 40.0%
GTACCGTTTGGTCTACATTA+TGG + Chr4:55251350-55251369 None:intergenic 40.0%
GTCTCTCCATTTCTTCCATT+TGG + Chr4:55249606-55249625 None:intergenic 40.0%
GTGTGTTAATCAGTGGGAAT+TGG - Chr4:55250428-55250447 MsG0480021215.01.T01:CDS 40.0%
GTTTGATCTTAGTCGGTGAT+TGG - Chr4:55252167-55252186 MsG0480021215.01.T01:CDS 40.0%
TATCATCGGGAGAGAAGTTA+TGG + Chr4:55251638-55251657 None:intergenic 40.0%
TCAATAGCACTGCATAACTG+AGG + Chr4:55248236-55248255 None:intergenic 40.0%
TCCCCCTTGTATTTCAATAG+TGG + Chr4:55250823-55250842 None:intergenic 40.0%
TGAGAAGGCAACTACTGATA+AGG + Chr4:55247913-55247932 None:intergenic 40.0%
TGATCAAACAAGCAGCACAA+AGG - Chr4:55251229-55251248 MsG0480021215.01.T01:intron 40.0%
TGGCACATAGACAAAACTGA+AGG - Chr4:55248536-55248555 MsG0480021215.01.T01:intron 40.0%
TGGGCAAAACCAAAATATGG+AGG + Chr4:55247884-55247903 None:intergenic 40.0%
TGTCTATACTTAATGCAGCC+GGG + Chr4:55248072-55248091 None:intergenic 40.0%
TTGATCTTAGTCGGTGATTG+GGG - Chr4:55252169-55252188 MsG0480021215.01.T01:CDS 40.0%
TTTCGTGCTTTAGTTGCTGT+TGG - Chr4:55249259-55249278 MsG0480021215.01.T01:intron 40.0%
! ACCCAGCAGTTTTTGCTAAT+AGG + Chr4:55249662-55249681 None:intergenic 40.0%
! ATTTTGTATCTGTGACTGGG+GGG - Chr4:55250154-55250173 MsG0480021215.01.T01:three_prime_UTR 40.0%
! CACCGACTAAGATCAAACAT+CGG + Chr4:55252165-55252184 None:intergenic 40.0%
! CATTTTGTATCTGTGACTGG+GGG - Chr4:55250153-55250172 MsG0480021215.01.T01:three_prime_UTR 40.0%
! CCTTTTCAAACAGATGCTTG+AGG - Chr4:55249865-55249884 MsG0480021215.01.T01:intron 40.0%
! CTCATATGTAGTTGATGTGG+CGG + Chr4:55251308-55251327 None:intergenic 40.0%
! CTGTTTGGAACTATGCATAG+AGG + Chr4:55250959-55250978 None:intergenic 40.0%
! CTTCTTGAGGAGCTTTAGTT+TGG + Chr4:55249101-55249120 None:intergenic 40.0%
! TACAGGCTCCTTTTGTGATT+GGG + Chr4:55251100-55251119 None:intergenic 40.0%
! TTTAGTTGCTGTTGGATCAC+TGG - Chr4:55249267-55249286 MsG0480021215.01.T01:intron 40.0%
!! TCAGTGGAACACCTTTGTTT+TGG - Chr4:55249704-55249723 MsG0480021215.01.T01:intron 40.0%
!!! CATTAGTTTTTGGGATTGGG+TGG + Chr4:55248822-55248841 None:intergenic 40.0%
ACCAAATGCACCCACATTCA+AGG + Chr4:55248007-55248026 None:intergenic 45.0%
ACCGAGAAGCTATTCCAAAC+TGG - Chr4:55247962-55247981 MsG0480021215.01.T01:intron 45.0%
AGGAAGGCTAAGAAGAGTAG+TGG - Chr4:55247656-55247675 MsG0480021215.01.T01:intron 45.0%
AGTAGTTGCCTTCCCATCAA+GGG + Chr4:55247594-55247613 None:intergenic 45.0%
ATACAGCCGACTGCAATTGA+TGG + Chr4:55248385-55248404 None:intergenic 45.0%
CATGTTTGAGCGATACTTCG+TGG + Chr4:55252084-55252103 None:intergenic 45.0%
CCGAGAAGCTATTCCAAACT+GGG - Chr4:55247963-55247982 MsG0480021215.01.T01:intron 45.0%
CGTAAGGAATGACATCCCTT+TGG - Chr4:55249740-55249759 MsG0480021215.01.T01:intron 45.0%
GAAGGCTAAGTTTACTCGTG+AGG + Chr4:55247850-55247869 None:intergenic 45.0%
GACTCCAAGATTGCTGAAGT+AGG - Chr4:55249956-55249975 MsG0480021215.01.T01:intron 45.0%
GAGGTCAAATGGTATGCACA+TGG + Chr4:55252571-55252590 None:intergenic 45.0%
GATTGTCGAGGATGAAAACG+TGG - Chr4:55249222-55249241 MsG0480021215.01.T01:intron 45.0%
GCACACATGTTAGTACCGTT+TGG + Chr4:55251362-55251381 None:intergenic 45.0%
GCTTATTTGCGGGATGTGAT+TGG + Chr4:55251189-55251208 None:intergenic 45.0%
GGAGAGACTAATAGATGGAG+AGG - Chr4:55249618-55249637 MsG0480021215.01.T01:intron 45.0%
GGTACTAACATGTGTGCTGA+TGG - Chr4:55251365-55251384 MsG0480021215.01.T01:intron 45.0%
GTGTGCACGTGTCTGATTAT+GGG + Chr4:55250109-55250128 None:intergenic 45.0%
GTTGCTCACCCAATCACAAA+AGG - Chr4:55251089-55251108 MsG0480021215.01.T01:CDS 45.0%
GTTGTCTGATCAAGATCGGA+AGG + Chr4:55250574-55250593 None:intergenic 45.0%
TAAAGCTCCTCAAGAAGCAG+AGG - Chr4:55249104-55249123 MsG0480021215.01.T01:intron 45.0%
TAATCAGACACGTGCACACA+TGG - Chr4:55250110-55250129 MsG0480021215.01.T01:three_prime_UTR 45.0%
TAGCCAAGGCACAAGTTAAC+AGG - Chr4:55250698-55250717 MsG0480021215.01.T01:intron 45.0%
TATAGACAGTAAAGCGGTGG+TGG - Chr4:55248084-55248103 MsG0480021215.01.T01:intron 45.0%
TATGGGAATCCCCATATGGA+CGG - Chr4:55247625-55247644 MsG0480021215.01.T01:intron 45.0%
TCCTTGAATGTGGGTGCATT+TGG - Chr4:55248003-55248022 MsG0480021215.01.T01:intron 45.0%
TCTGAGAGCAAATCACTGCA+AGG + Chr4:55248155-55248174 None:intergenic 45.0%
TGGGAAGGCAACTACTGATA+AGG - Chr4:55247598-55247617 MsG0480021215.01.T01:intron 45.0%
TGTGTGCACGTGTCTGATTA+TGG + Chr4:55250110-55250129 None:intergenic 45.0%
TGTTCTATCAGCAGCACTTG+AGG - Chr4:55248287-55248306 MsG0480021215.01.T01:intron 45.0%
TTGAAGAACCCTTGATGGGA+AGG - Chr4:55247583-55247602 MsG0480021215.01.T01:intron 45.0%
! CCCAGTTTGGAATAGCTTCT+CGG + Chr4:55247966-55247985 None:intergenic 45.0%
! CTACAGGCTCCTTTTGTGAT+TGG + Chr4:55251101-55251120 None:intergenic 45.0%
! CTTGTCTAGGGTAGATGAGA+AGG + Chr4:55247928-55247947 None:intergenic 45.0%
! CTTTTGGATGACAGTTTGGG+AGG + Chr4:55252607-55252626 None:intergenic 45.0%
! GAGCATTGCAAAAGCAGCAA+AGG - Chr4:55249925-55249944 MsG0480021215.01.T01:intron 45.0%
! GGGTGCTATGATAGAGATCT+GGG + Chr4:55248801-55248820 None:intergenic 45.0%
! GTGATTGGTCCAAAACAGCA+TGG + Chr4:55251174-55251193 None:intergenic 45.0%
! TGGGTGCTATGATAGAGATC+TGG + Chr4:55248802-55248821 None:intergenic 45.0%
! TGGTGCACATGATTTGCGTA+AGG - Chr4:55249724-55249743 MsG0480021215.01.T01:intron 45.0%
!! ACAAAGGTGTTCCACTGACT+AGG + Chr4:55249702-55249721 None:intergenic 45.0%
!! AGCATGGTTTGTTTCAGCTC+TGG + Chr4:55251158-55251177 None:intergenic 45.0%
!! GCATGGTTTGTTTCAGCTCT+GGG + Chr4:55251157-55251176 None:intergenic 45.0%
!! GTGATGTGTTGTTTGAACCC+AGG + Chr4:55248333-55248352 None:intergenic 45.0%
!! TGACCTGTTAACTTGTGCCT+TGG + Chr4:55250704-55250723 None:intergenic 45.0%
!!! GGATTTTTTCGGTATCGGCA+TGG - Chr4:55248456-55248475 MsG0480021215.01.T01:intron 45.0%
!!! AAAATTATTTATTGAAATTT+TGG + Chr4:55248414-55248433 None:intergenic 5.0%
!!! ATTATTTAAAATATTGAATT+TGG - Chr4:55249143-55249162 MsG0480021215.01.T01:intron 5.0%
!!! TTATTTAAAATATTGAATTT+GGG - Chr4:55249144-55249163 MsG0480021215.01.T01:intron 5.0%
ATCTTGATCGGACGGCTCTA+AGG + Chr4:55250482-55250501 None:intergenic 50.0%
ATGTGGGGGTCTAACAAAGC+TGG + Chr4:55251458-55251477 None:intergenic 50.0%
ATGTGTTTGGAGGGAGTTCC+AGG - Chr4:55251661-55251680 MsG0480021215.01.T01:intron 50.0%
CACAGCCGTCCAATCTTGAT+CGG + Chr4:55250494-55250513 None:intergenic 50.0%
CAGTAGTTGCCTTCCCATCA+AGG + Chr4:55247595-55247614 None:intergenic 50.0%
CCGACTCCATCAATTGCAGT+CGG - Chr4:55248376-55248395 MsG0480021215.01.T01:intron 50.0%
CCGACTGCAATTGATGGAGT+CGG + Chr4:55248379-55248398 None:intergenic 50.0%
CTATACTTAATGCAGCCGGG+TGG + Chr4:55248069-55248088 None:intergenic 50.0%
CTATGCACCTCTGCTTCTTG+AGG + Chr4:55249114-55249133 None:intergenic 50.0%
GAAGTTATGGTGTCTGACGG+AGG + Chr4:55251625-55251644 None:intergenic 50.0%
TAGAGCCGTCCGATCAAGAT+TGG - Chr4:55250482-55250501 MsG0480021215.01.T01:intron 50.0%
! ACTCTCTTTTCTCTCGACCG+AGG - Chr4:55251597-55251616 MsG0480021215.01.T01:intron 50.0%
! GGGAGGCACAAAACATGTTG+AGG + Chr4:55252590-55252609 None:intergenic 50.0%
!! CTCATGAGCATCGAAGCACT+TGG - Chr4:55248687-55248706 MsG0480021215.01.T01:intron 50.0%
CGATCAAGATTGGACGGCTG+TGG - Chr4:55250492-55250511 MsG0480021215.01.T01:intron 55.0%
GCAGTCGTGCAGTGAGTTCA+AGG + Chr4:55250596-55250615 None:intergenic 55.0%
GCCGTCCAATCTTGATCGGA+CGG + Chr4:55250490-55250509 None:intergenic 55.0%
GCCGTCCGATCAAGATTGGA+CGG - Chr4:55250486-55250505 MsG0480021215.01.T01:intron 55.0%
GGGACAGATCGTGGCTCATT+CGG - Chr4:55252189-55252208 MsG0480021215.01.T01:CDS 55.0%
GTATCTGTGACTGGGGGGAA+AGG - Chr4:55250159-55250178 MsG0480021215.01.T01:three_prime_UTR 55.0%
TCAAGACGCTGTCTGTCACC+TGG + Chr4:55251682-55251701 None:intergenic 55.0%
! GGGGTTACACCCTTTTGAGC+TGG + Chr4:55247743-55247762 None:intergenic 55.0%
CCCTACCTAACCTCACCACC+CGG - Chr4:55248051-55248070 MsG0480021215.01.T01:intron 60.0%
CCGGGTGGTGAGGTTAGGTA+GGG + Chr4:55248054-55248073 None:intergenic 60.0%
CGGTGATTGGGGACAGATCG+TGG - Chr4:55252180-55252199 MsG0480021215.01.T01:CDS 60.0%
CTTAATGCAGCCGGGTGGTG+AGG + Chr4:55248064-55248083 None:intergenic 60.0%
GGTGGTGAGGTTAGGTAGGG+TGG + Chr4:55248051-55248070 None:intergenic 60.0%
GCCGGGTGGTGAGGTTAGGT+AGG + Chr4:55248055-55248074 None:intergenic 65.0%
GGTGTCTGACGGAGGAGCCT+CGG + Chr4:55251617-55251636 None:intergenic 65.0%
TGCAGCCGGGTGGTGAGGTT+AGG + Chr4:55248059-55248078 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr4 gene 55247431 55252940 55247431 ID=MsG0480021215.01;Name=MsG0480021215.01
Chr4 mRNA 55247431 55252940 55247431 ID=MsG0480021215.01.T01;Parent=MsG0480021215.01;Name=MsG0480021215.01.T01;_AED=0.47;_eAED=0.52;_QI=0|0.75|0.6|1|0.5|0.2|5|416|117
Chr4 exon 55247431 55247451 55247431 ID=MsG0480021215.01.T01:exon:6719;Parent=MsG0480021215.01.T01
Chr4 exon 55249964 55250493 55249964 ID=MsG0480021215.01.T01:exon:6718;Parent=MsG0480021215.01.T01
Chr4 CDS 55252937 55252940 55252937 ID=MsG0480021215.01.T01:cds;Parent=MsG0480021215.01.T01
Chr4 CDS 55252063 55252211 55252063 ID=MsG0480021215.01.T01:cds;Parent=MsG0480021215.01.T01
Chr4 CDS 55251083 55251148 55251083 ID=MsG0480021215.01.T01:cds;Parent=MsG0480021215.01.T01
Chr4 CDS 55250359 55250493 55250359 ID=MsG0480021215.01.T01:cds;Parent=MsG0480021215.01.T01
Chr4 three_prime_UTR 55249964 55250358 55249964 ID=MsG0480021215.01.T01:three_prime_utr;Parent=MsG0480021215.01.T01
Chr4 three_prime_UTR 55247431 55247451 55247431 ID=MsG0480021215.01.T01:three_prime_utr;Parent=MsG0480021215.01.T01
Chr4 mRNA 55249953 55252940 55249953 ID=MsG0480021215.01.T02;Parent=MsG0480021215.01;Name=MsG0480021215.01.T02;_AED=0.47;_eAED=0.52;_QI=0|0.66|0.5|1|0.66|0.5|4|406|117
Chr4 exon 55249953 55250493 55249953 ID=MsG0480021215.01.T02:exon:6720;Parent=MsG0480021215.01.T02
Chr4 CDS 55252937 55252940 55252937 ID=MsG0480021215.01.T02:cds;Parent=MsG0480021215.01.T02
Chr4 CDS 55252063 55252211 55252063 ID=MsG0480021215.01.T02:cds;Parent=MsG0480021215.01.T02
Chr4 CDS 55251083 55251148 55251083 ID=MsG0480021215.01.T02:cds;Parent=MsG0480021215.01.T02
Chr4 CDS 55250359 55250493 55250359 ID=MsG0480021215.01.T02:cds;Parent=MsG0480021215.01.T02
Chr4 three_prime_UTR 55249953 55250358 55249953 ID=MsG0480021215.01.T02:three_prime_utr;Parent=MsG0480021215.01.T02
Gene Sequence

>MsG0480021215.01.T01

ATGGTGATTTGCTCTCAGAACTGCAATTTTATTCGTCCACAATGTAAGCATGCAATAACCTTGACTTTTGATGTGATCCTCAGTTATGCAGTGCTATTGATTGAATCTAAGGATCAAGAAGGTCAATCTCATGTTCTATCAGCAGCACTTGAGATTGTCGAGGATGAAAACGTGGCACCTGATTCCAAATTTCGTGCTTTAGTTGCTGTTGGATCACTGATGCTTGAGGGTCTTGTGAAAAAAATAGCACTGGACTTTGATGTTTTGAGCATTGCAAAAGCAGCAAAGGGTTCTAAGGACTCCAAGATTGCTGAAGTAGGATCTGACATCGAGCTAGTATCAAAGCAAAGCTGA

>MsG0480021215.01.T02

ATGGTGATTTGCTCTCAGAACTGCAATTTTATTCGTCCACAATGTAAGCATGCAATAACCTTGACTTTTGATGTGATCCTCAGTTATGCAGTGCTATTGATTGAATCTAAGGATCAAGAAGGTCAATCTCATGTTCTATCAGCAGCACTTGAGATTGTCGAGGATGAAAACGTGGCACCTGATTCCAAATTTCGTGCTTTAGTTGCTGTTGGATCACTGATGCTTGAGGGTCTTGTGAAAAAAATAGCACTGGACTTTGATGTTTTGAGCATTGCAAAAGCAGCAAAGGGTTCTAAGGACTCCAAGATTGCTGAAGTAGGATCTGACATCGAGCTAGTATCAAAGCAAAGCTGA

Protein sequence

>MsG0480021215.01.T01

MVICSQNCNFIRPQCKHAITLTFDVILSYAVLLIESKDQEGQSHVLSAALEIVEDENVAPDSKFRALVAVGSLMLEGLVKKIALDFDVLSIAKAAKGSKDSKIAEVGSDIELVSKQS*

>MsG0480021215.01.T02

MVICSQNCNFIRPQCKHAITLTFDVILSYAVLLIESKDQEGQSHVLSAALEIVEDENVAPDSKFRALVAVGSLMLEGLVKKIALDFDVLSIAKAAKGSKDSKIAEVGSDIELVSKQS*