AlfalfaGEDB | MsG0680034318.01

M. sativa cultivar ZhongmuNo.1 / MsG0680034318.01

KEGG: -
GO: GO:0003747 GO:0006415
PFAM: PF00472

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0680034318.01.T01	AES75765.2	80	245	20	5	1	218	1	243	2.56E-113	334

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0680034318.01.T01	Q7VIE6	48.052	77	34	2	67	137	226	302	1.48E-14	74.7

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0680034318.01.T01	G7KMG2	80.000	245	20	5	1	218	1	243	1.22e-113	334

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048889.01	MsG0680034318.01	-0.812589	3.929186e-51	2.508225e-48
MsG0080048986.01	MsG0680034318.01	0.807882	4.067181e-50	2.291620e-47
MsG0080049023.01	MsG0680034318.01	0.805662	1.197972e-49	6.374547e-47
MsG0080049133.01	MsG0680034318.01	0.808134	3.594886e-50	2.039114e-47
MsG0180001925.01	MsG0680034318.01	0.816903	4.350749e-52	3.122324e-49
MsG0180002099.01	MsG0680034318.01	0.819609	1.061489e-52	8.207204e-50
MsG0180002426.01	MsG0680034318.01	0.813701	2.239893e-51	1.473273e-48
MsG0180003351.01	MsG0680034318.01	0.813092	3.049581e-51	1.972681e-48
MsG0180004124.01	MsG0680034318.01	0.800569	1.355429e-48	6.332130e-46
MsG0180004553.01	MsG0680034318.01	0.801015	1.099181e-48	5.193855e-46
MsG0180004581.01	MsG0680034318.01	0.800518	1.387860e-48	6.475404e-46
MsG0180004731.01	MsG0680034318.01	0.830258	3.250538e-55	3.407017e-52
MsG0180004737.01	MsG0680034318.01	0.826066	3.325349e-54	3.085662e-51
MsG0180004761.01	MsG0680034318.01	0.814017	1.908185e-51	1.265851e-48
MsG0180005817.01	MsG0680034318.01	0.806916	6.518517e-50	3.581823e-47
MsG0280006381.01	MsG0680034318.01	0.803399	3.551844e-49	1.783115e-46
MsG0380012148.01	MsG0680034318.01	0.815394	9.456045e-52	6.511508e-49
MsG0380014642.01	MsG0680034318.01	0.803949	2.730426e-49	1.390338e-46
MsG0380014735.01	MsG0680034318.01	0.803499	3.386729e-49	1.704599e-46
MsG0680034318.01	MsG0680035584.01	0.801178	1.017631e-48	4.828148e-46
MsG0680034318.01	MsG0780037458.01	0.804663	1.938660e-49	1.005407e-46
MsG0680034318.01	MsG0780039838.01	0.800177	1.628694e-48	7.533310e-46
MsG0680034318.01	MsG0780041531.01	0.840740	7.247803e-58	1.042124e-54
MsG0680034318.01	MsG0780041637.01	0.803925	2.761919e-49	1.405526e-46
MsG0680034318.01	MsG0880045369.01	0.802375	5.780740e-49	2.827289e-46
MsG0680034318.01	MsG0880045385.01	0.811491	6.818512e-51	4.226679e-48
MsG0680034318.01	MsG0880045683.01	-0.804881	1.745812e-49	9.105845e-47
MsG0680034318.01	MsG0880046105.01	0.813220	2.857923e-51	1.855167e-48
MsG0680034318.01	MsG0880046167.01	0.836580	8.608053e-57	1.089342e-53
MsG0680034318.01	MsG0880046174.01	0.807312	5.375561e-50	2.984387e-47
MsG0680034318.01	MsG0880046469.01	0.803702	3.072627e-49	1.554539e-46
MsG0680034318.01	MsG0880046630.01	0.809953	1.466434e-50	8.728033e-48
MsG0480019183.01	MsG0680034318.01	0.801313	9.550167e-49	4.546510e-46
MsG0480019836.01	MsG0680034318.01	0.817759	2.791310e-52	2.050802e-49
MsG0480019838.01	MsG0680034318.01	0.806352	8.575688e-50	4.644388e-47
MsG0480019975.01	MsG0680034318.01	0.815443	9.221100e-52	6.358521e-49
MsG0480022687.01	MsG0680034318.01	0.807231	5.591193e-50	3.097527e-47
MsG0480023152.01	MsG0680034318.01	0.824702	6.993255e-54	6.242377e-51
MsG0480023242.01	MsG0680034318.01	0.840632	7.735448e-58	1.108463e-54
MsG0480023244.01	MsG0680034318.01	0.815435	9.256867e-52	6.381727e-49
MsG0480023480.01	MsG0680034318.01	0.832404	9.638840e-56	1.076284e-52
MsG0480023481.01	MsG0680034318.01	0.803911	2.780289e-49	1.414347e-46
MsG0480023695.01	MsG0680034318.01	0.818525	1.873273e-52	1.405605e-49
MsG0580025105.01	MsG0680034318.01	0.801102	1.055124e-48	4.996616e-46
MsG0380016166.01	MsG0680034318.01	0.802564	5.285053e-49	2.597096e-46
MsG0380016229.01	MsG0680034318.01	0.806230	9.099321e-50	4.913004e-47
MsG0380016889.01	MsG0680034318.01	0.804971	1.672268e-49	8.741782e-47
MsG0380016934.01	MsG0680034318.01	0.802756	4.822732e-49	2.381692e-46
MsG0380016935.01	MsG0680034318.01	0.805918	1.058608e-49	5.670090e-47
MsG0380017231.01	MsG0680034318.01	-0.807955	3.925322e-50	2.216021e-47
MsG0380017406.01	MsG0680034318.01	0.804865	1.759620e-49	9.173832e-47
MsG0380017804.01	MsG0680034318.01	0.815469	9.096990e-52	6.277772e-49
MsG0380017812.01	MsG0680034318.01	0.805910	1.062488e-49	5.689802e-47
MsG0380017928.01	MsG0680034318.01	0.808637	2.808658e-50	1.614185e-47
MsG0480018201.01	MsG0680034318.01	0.821078	4.888646e-53	3.937846e-50
MsG0480018202.01	MsG0680034318.01	0.811438	7.001323e-51	4.333974e-48
MsG0480018203.01	MsG0680034318.01	0.816080	6.648414e-52	4.665304e-49
MsG0580029792.01	MsG0680034318.01	0.826286	2.949207e-54	2.753843e-51
MsG0280009079.01	MsG0680034318.01	0.815100	1.098928e-51	7.506283e-49
MsG0280009742.01	MsG0680034318.01	0.803594	3.235816e-49	1.632656e-46
MsG0280009864.01	MsG0680034318.01	0.800848	1.188588e-48	5.592418e-46

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0680034318.01.T01	MTR_6g059330	80.000	245	20	5	1	218	1	243	3.10e-117	334
MsG0680034318.01.T01	MTR_7g110570	54.167	48	22	0	79	126	269	316	6.72e-11	61.2
MsG0680034318.01.T01	MTR_7g110570	54.167	48	22	0	79	126	275	322	7.37e-11	61.2
MsG0680034318.01.T01	MTR_7g112100	54.000	50	23	0	79	128	346	395	7.44e-11	61.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0680034318.01.T01	AT1G33330	60.241	166	50	1	62	211	86	251	8.37e-65	201
MsG0680034318.01.T01	AT1G33330	60.241	166	50	1	62	211	86	251	8.37e-65	201
MsG0680034318.01.T01	AT1G33330	60.241	166	50	1	62	211	86	251	8.37e-65	201
MsG0680034318.01.T01	AT2G47020	46.875	64	30	1	63	126	267	326	6.00e-11	61.6
MsG0680034318.01.T01	AT2G47020	52.941	51	24	0	76	126	211	261	7.57e-11	61.2
MsG0680034318.01.T01	AT2G47020	46.875	64	30	1	63	126	267	326	7.77e-11	61.2
MsG0680034318.01.T01	AT1G56350	45.455	66	32	1	63	128	341	402	9.19e-11	61.2

Find 61 sgRNAs with CRISPR-Local

Find 182 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AACAGGAATGCAAGCTCTTT+TGG	0.214885	6:-85612389	MsG0680034318.01.T01:intron
CGCTCTCTTATAGCTCTTAA+AGG	0.225668	6:-85613289	MsG0680034318.01.T01:intron
GCCGTGGTTGGCGGCGGCGG+CGG	0.299253	6:+85614478	None:intergenic
CCATTTCGCACTGTCTCATT+AGG	0.336040	6:+85614429	None:intergenic
ACCGCCGTGGTTGGCGGCGG+CGG	0.342283	6:+85614475	None:intergenic
GTTGGCGGCGGCGGCGGTGG+TGG	0.342332	6:+85614484	None:intergenic
GGCGGCGGCGGCGGTGGTGG+TGG	0.344019	6:+85614487	None:intergenic
ACCGCCGCCGCCGCCAACCA+CGG	0.364295	6:-85614479	MsG0680034318.01.T01:CDS
GTGGTTGGCGGCGGCGGCGG+TGG	0.364556	6:+85614481	None:intergenic
CCTCCGAAGTCATCAATTAG+AGG	0.388048	6:-85612545	MsG0680034318.01.T01:CDS
CCTAATGAGACAGTGCGAAA+TGG	0.426841	6:-85614429	MsG0680034318.01.T01:CDS
ATCTGATGATTCGCTTAGAA+AGG	0.432213	6:-85611979	MsG0680034318.01.T01:CDS
CTAATGAGACAGTGCGAAAT+GGG	0.439585	6:-85614428	MsG0680034318.01.T01:CDS
GCGGCGGCGGTGGTGGTGGT+TGG	0.456803	6:+85614491	None:intergenic
GTTGTGGAGTGAAGTGAGAT+TGG	0.457155	6:+85614515	None:intergenic
TGAATTGTTGTTTGAGAGTG+AGG	0.457175	6:+85614600	None:intergenic
TCATTAGGTCATCATCGGTT+AGG	0.467025	6:+85614444	None:intergenic
TAGGTAACCGCCGTGGTTGG+CGG	0.468896	6:+85614469	None:intergenic
TCAGATGCTGCAAAATATCT+CGG	0.475635	6:-85612338	MsG0680034318.01.T01:CDS
ATTATGTGCAGGTTATCTAC+TGG	0.484735	6:-85612023	MsG0680034318.01.T01:intron
GGTCATCATCGGTTAGGTCT+AGG	0.493313	6:+85614450	None:intergenic
GATGATGGAGAAAGTGGTGG+TGG	0.503216	6:+85614561	None:intergenic
GGTGGTGGTGGTTGGTGTTG+TGG	0.507693	6:+85614499	None:intergenic
ACATTCAAAACCTCTGGTCC+TGG	0.514850	6:-85614404	MsG0680034318.01.T01:CDS
ATGGGTACATTCAAAACCTC+TGG	0.516467	6:-85614410	MsG0680034318.01.T01:CDS
TGATGTGGGAAAATGGATGA+TGG	0.524278	6:+85614546	None:intergenic
GTAACCGCCGTGGTTGGCGG+CGG	0.528971	6:+85614472	None:intergenic
ACCCACTGGTATCATCGCTC+AGG	0.530803	6:-85614333	MsG0680034318.01.T01:intron
GTCTAGGTAACCGCCGTGGT+TGG	0.531366	6:+85614466	None:intergenic
ATGGCACACAAAATCCTCTT+CGG	0.532814	6:-85614635	MsG0680034318.01.T01:CDS
TTGTGGAGTGAAGTGAGATT+GGG	0.533473	6:+85614516	None:intergenic
CAGATGCTGCAAAATATCTC+GGG	0.537897	6:-85612337	MsG0680034318.01.T01:intron
AAATGATCTGCGAGCATCAA+GGG	0.538812	6:-85611952	MsG0680034318.01.T01:CDS
CGTCTTAAACACTTACCCAC+TGG	0.541464	6:-85614347	MsG0680034318.01.T01:CDS
GGCGTTTAATTGCTGAAGCA+CGG	0.546007	6:+85613314	None:intergenic
TAGTTCAGTAAAACATCAGA+AGG	0.548855	6:+85611925	None:intergenic
TTGTTTGAGAGTGAGGATGA+AGG	0.552107	6:+85614607	None:intergenic
TTATTACGATGCTGACCACC+AGG	0.553309	6:+85614386	None:intergenic
AAAATGGATGATGGAGAAAG+TGG	0.563738	6:+85614555	None:intergenic
CTGTCTCATTAGGTCATCAT+CGG	0.588129	6:+85614439	None:intergenic
CTCCGAAGTCATCAATTAGA+GGG	0.591506	6:-85612544	MsG0680034318.01.T01:intron
TATCTACTGGAGCACTGTCT+CGG	0.597134	6:-85612010	MsG0680034318.01.T01:CDS
GCCGCCGCCGCCAACCACGG+CGG	0.599523	6:-85614476	MsG0680034318.01.T01:CDS
TAATTGATGACTTCGGAGGA+AGG	0.602100	6:+85612549	None:intergenic
AGGATCTGAAGAAGCTCTCG+AGG	0.609913	6:+85612569	None:intergenic
TAAATGATCTGCGAGCATCA+AGG	0.616677	6:-85611953	MsG0680034318.01.T01:CDS
GACCCTCTAATTGATGACTT+CGG	0.625335	6:+85612542	None:intergenic
GGATGAAGGTTGGTCCGAAG+AGG	0.633804	6:+85614621	None:intergenic
ACCTGAGCGATGATACCAGT+GGG	0.638957	6:+85614332	None:intergenic
ATGATGGAGAAAGTGGTGGT+GGG	0.640982	6:+85614562	None:intergenic
TTGAGAGTGAGGATGAAGGT+TGG	0.647592	6:+85614611	None:intergenic
TAAGAGCTATAAGAGAGCGT+AGG	0.648788	6:+85613293	None:intergenic
GAGGCGGTGAATAAGCATCA+AGG	0.649822	6:+85612588	None:intergenic
TTCAAAACCTCTGGTCCTGG+TGG	0.650837	6:-85614401	MsG0680034318.01.T01:CDS
ATGCTGACCACCAGGACCAG+AGG	0.652907	6:+85614394	None:intergenic
CCTCTAATTGATGACTTCGG+AGG	0.662115	6:+85612545	None:intergenic
ATCTGAAGAAGCTCTCGAGG+CGG	0.680421	6:+85612572	None:intergenic
TCACAATACAGTCACAACAA+TGG	0.680551	6:-85614654	MsG0680034318.01.T01:exon
ATGGATGATGGAGAAAGTGG+TGG	0.683754	6:+85614558	None:intergenic
AACCTGAGCGATGATACCAG+TGG	0.744277	6:+85614331	None:intergenic
TTAGGTCTAGGTAACCGCCG+TGG	0.773380	6:+85614462	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AATTTTAATTTTTTTATTAT+TGG	-	Chr6:85612312-85612331	MsG0680034318.01.T01:intron	0.0%
!!	ATAAATAAAAAATATAACGT+CGG	-	Chr6:85613724-85613743	MsG0680034318.01.T01:intron	10.0%
!!!	ATAAAATAGATTTTTTTTAG+AGG	-	Chr6:85612601-85612620	MsG0680034318.01.T01:CDS	10.0%
!!!	ATTTTTTTTATGATTTTTCT+AGG	-	Chr6:85613223-85613242	MsG0680034318.01.T01:intron	10.0%
!!!	TATTTAATTGTTTATTTCTT+TGG	-	Chr6:85614303-85614322	MsG0680034318.01.T01:intron	10.0%
!!!	TATTTGTGTTTAATTTTTAT+GGG	+	Chr6:85612353-85612372	None:intergenic	10.0%
!!!	TTTAATTTTTTTATTATTGG+CGG	-	Chr6:85612315-85612334	MsG0680034318.01.T01:intron	10.0%
!!	AAGAAAATCATAAGTATATT+TGG	+	Chr6:85614177-85614196	None:intergenic	15.0%
!!	AAGTAATTACTATAAGTAAA+GGG	+	Chr6:85613899-85613918	None:intergenic	15.0%
!!	CTTAAAAAAGTTATAACAAA+CGG	+	Chr6:85612445-85612464	None:intergenic	15.0%
!!	CTTATGTATAAGATATAATA+AGG	-	Chr6:85613401-85613420	MsG0680034318.01.T01:intron	15.0%
!!	TAAGTAATTACTATAAGTAA+AGG	+	Chr6:85613900-85613919	None:intergenic	15.0%
!!	TTAAAAAAGTTATAACAAAC+GGG	+	Chr6:85612444-85612463	None:intergenic	15.0%
!!!	ACTTTTTATTGTAATATCAT+GGG	-	Chr6:85613181-85613200	MsG0680034318.01.T01:intron	15.0%
!!!	ATTTGTGTTTAATTTTTATG+GGG	+	Chr6:85612352-85612371	None:intergenic	15.0%
!!!	CTATTTGTGTTTAATTTTTA+TGG	+	Chr6:85612354-85612373	None:intergenic	15.0%
!!!	TGATTTTCTCAAATAATTAT+CGG	+	Chr6:85612409-85612428	None:intergenic	15.0%
!!!	TTAATTTTTTTATTATTGGC+GGG	-	Chr6:85612316-85612335	MsG0680034318.01.T01:intron	15.0%
!!	AGCATTGTAATTTATGATTA+GGG	-	Chr6:85614366-85614385	MsG0680034318.01.T01:CDS	20.0%
!!	ATTGAATTCTTGAGAAATTT+AGG	-	Chr6:85613662-85613681	MsG0680034318.01.T01:intron	20.0%
!!	TACACATATAATTACATTGA+GGG	+	Chr6:85612851-85612870	None:intergenic	20.0%
!!	TTGGATACAACTATATAAAA+GGG	+	Chr6:85612676-85612695	None:intergenic	20.0%
!!	TTTGGATACAACTATATAAA+AGG	+	Chr6:85612677-85612696	None:intergenic	20.0%
!!!	AAGCATTGTAATTTATGATT+AGG	-	Chr6:85614365-85614384	MsG0680034318.01.T01:CDS	20.0%
!!!	AATAATCTATCTAGTTTGTT+TGG	+	Chr6:85612695-85612714	None:intergenic	20.0%
!!!	AATTGTTTATTTCTTTGGTA+TGG	-	Chr6:85614308-85614327	MsG0680034318.01.T01:intron	20.0%
!!!	CACTTTTTATTGTAATATCA+TGG	-	Chr6:85613180-85613199	MsG0680034318.01.T01:intron	20.0%
!!!	TGTTGCAATCTTTTAAAAAT+TGG	-	Chr6:85613631-85613650	MsG0680034318.01.T01:intron	20.0%
!!!	TTATTTTAATCCGTAACAAA+CGG	-	Chr6:85612824-85612843	MsG0680034318.01.T01:intron	20.0%
!	CACATTGCAATTTACAAATT+TGG	-	Chr6:85613605-85613624	MsG0680034318.01.T01:intron	25.0%
!	CTACACATATAATTACATTG+AGG	+	Chr6:85612852-85612871	None:intergenic	25.0%
!	CTTAAATTCTAGTAACAATG+GGG	+	Chr6:85614348-85614367	None:intergenic	25.0%
!	GCTTAAATTCTAGTAACAAT+GGG	+	Chr6:85614349-85614368	None:intergenic	25.0%
!	TGCTTAAATTCTAGTAACAA+TGG	+	Chr6:85614350-85614369	None:intergenic	25.0%
!	TTCTCAAGAATTCAATCTTT+GGG	+	Chr6:85613658-85613677	None:intergenic	25.0%
!	TTTCTCAAGAATTCAATCTT+TGG	+	Chr6:85613659-85613678	None:intergenic	25.0%
!!	AATTTAGGTTATGGTTCAAA+AGG	-	Chr6:85613677-85613696	MsG0680034318.01.T01:intron	25.0%
!!	ACTTATGATTTTCTTTCAAC+AGG	-	Chr6:85614182-85614201	MsG0680034318.01.T01:intron	25.0%
!!	GAAAATGTAGAGACTATTTT+GGG	-	Chr6:85613103-85613122	MsG0680034318.01.T01:intron	25.0%
!!	TGAAAATGTAGAGACTATTT+TGG	-	Chr6:85613102-85613121	MsG0680034318.01.T01:intron	25.0%
!!	TTCTTGAGAAATTTAGGTTA+TGG	-	Chr6:85613668-85613687	MsG0680034318.01.T01:intron	25.0%
!!	TTTTTATGATTTTTCTAGGC+TGG	-	Chr6:85613227-85613246	MsG0680034318.01.T01:intron	25.0%
!!!	ATTGCAAATTTTGGGTTATT+GGG	+	Chr6:85614094-85614113	None:intergenic	25.0%
!!!	TATTTTAATCCGTAACAAAC+GGG	-	Chr6:85612825-85612844	MsG0680034318.01.T01:intron	25.0%
!!!	TTTGGGTTTTGTTTTTGTAA+GGG	-	Chr6:85613120-85613139	MsG0680034318.01.T01:intron	25.0%
!!!	TTTTGGGTTTTGTTTTTGTA+AGG	-	Chr6:85613119-85613138	MsG0680034318.01.T01:intron	25.0%
	ATATGTCTGGAAAAATTGGT+CGG	-	Chr6:85612914-85612933	MsG0680034318.01.T01:intron	30.0%
	CAATAACCCAAAATTTGCAA+TGG	-	Chr6:85614093-85614112	MsG0680034318.01.T01:intron	30.0%
	CTTCATATGTCTGGAAAAAT+TGG	-	Chr6:85612910-85612929	MsG0680034318.01.T01:intron	30.0%
	CTTTCTTTCTTGATTTAGTC+AGG	-	Chr6:85613966-85613985	MsG0680034318.01.T01:intron	30.0%
	TATCAGAGACTAAAATGTCA+GGG	+	Chr6:85612378-85612397	None:intergenic	30.0%
	TCTCAAATAATTATCGGTCT+CGG	+	Chr6:85612403-85612422	None:intergenic	30.0%
!	AAATGTTCAGGTAATGGTAA+TGG	-	Chr6:85614394-85614413	MsG0680034318.01.T01:CDS	30.0%
!	AATTTTCTTACGGGTCAATT+TGG	+	Chr6:85613147-85613166	None:intergenic	30.0%
!	AGCATACCATTGCAAATTTT+GGG	+	Chr6:85614102-85614121	None:intergenic	30.0%
!	AGGTTGAATTGTTTTCACAT+TGG	-	Chr6:85613421-85613440	MsG0680034318.01.T01:intron	30.0%
!	ATCCTTCACAATTTTCTTAC+GGG	+	Chr6:85613156-85613175	None:intergenic	30.0%
!	CGAACAATTGATAACTAGTT+TGG	-	Chr6:85614534-85614553	MsG0680034318.01.T01:CDS	30.0%
!	GATCCTTCACAATTTTCTTA+CGG	+	Chr6:85613157-85613176	None:intergenic	30.0%
!!	AACAAATGGTTTGTTTGGAT+TGG	+	Chr6:85613559-85613578	None:intergenic	30.0%
!!	GTTGTTTTCATAAGCTATCT+TGG	-	Chr6:85613450-85613469	MsG0680034318.01.T01:intron	30.0%
!!	TCAGATATTGGTTCACAAAT+TGG	-	Chr6:85614067-85614086	MsG0680034318.01.T01:intron	30.0%
!!!	CATTGCAAATTTTGGGTTAT+TGG	+	Chr6:85614095-85614114	None:intergenic	30.0%
	AAACACCAAAGGGAAACAAA+TGG	+	Chr6:85613573-85613592	None:intergenic	35.0%
	ACAAACCATTTGTTTCCCTT+TGG	-	Chr6:85613565-85613584	MsG0680034318.01.T01:intron	35.0%
	ACCATTACCTGAACATTTCA+TGG	+	Chr6:85614392-85614411	None:intergenic	35.0%
	ATCGAAACAGATAGTGAAGA+AGG	+	Chr6:85613330-85613349	None:intergenic	35.0%
	ATCTGATGATTCGCTTAGAA+AGG	-	Chr6:85614609-85614628	MsG0680034318.01.T01:CDS	35.0%
	ATTATGTGCAGGTTATCTAC+TGG	-	Chr6:85614565-85614584	MsG0680034318.01.T01:CDS	35.0%
	ATTGCAATGTGACACTTCTA+AGG	+	Chr6:85613596-85613615	None:intergenic	35.0%
	ATTTGCAATGGTATGCTCAA+TGG	-	Chr6:85614105-85614124	MsG0680034318.01.T01:intron	35.0%
	GCTTCAAATGATAAGCTGTT+AGG	-	Chr6:85612567-85612586	MsG0680034318.01.T01:CDS	35.0%
	GGTCATACTCTATATGTGTT+CGG	-	Chr6:85613758-85613777	MsG0680034318.01.T01:intron	35.0%
	GTATCAGAGACTAAAATGTC+AGG	+	Chr6:85612379-85612398	None:intergenic	35.0%
	TCAATTAGAGGGTCAGATAT+TGG	-	Chr6:85614055-85614074	MsG0680034318.01.T01:intron	35.0%
	TCACAATACAGTCACAACAA+TGG	-	Chr6:85611934-85611953	MsG0680034318.01.T01:CDS	35.0%
	TCAGATGCTGCAAAATATCT+CGG	-	Chr6:85614250-85614269	MsG0680034318.01.T01:intron	35.0%
	TGAGTTTATCTACCTGCATT+GGG	+	Chr6:85613530-85613549	None:intergenic	35.0%
	TTGAGTTTATCTACCTGCAT+TGG	+	Chr6:85613531-85613550	None:intergenic	35.0%
!	ACTTCTAAGGAAACACCAAA+GGG	+	Chr6:85613583-85613602	None:intergenic	35.0%
!	GAGCATACCATTGCAAATTT+TGG	+	Chr6:85614103-85614122	None:intergenic	35.0%
!	TAGCCAAGGAATGAATTTTC+AGG	+	Chr6:85614440-85614459	None:intergenic	35.0%
!	TTTTCCAGACATATGAAGCA+TGG	+	Chr6:85612908-85612927	None:intergenic	35.0%
!!	AAAATGGATGATGGAGAAAG+TGG	+	Chr6:85612036-85612055	None:intergenic	35.0%
!!	AGGGAAACAAATGGTTTGTT+TGG	+	Chr6:85613564-85613583	None:intergenic	35.0%
!!	ATAACGTCGGTTCAATCTTT+GGG	-	Chr6:85613737-85613756	MsG0680034318.01.T01:intron	35.0%
!!	CGAATTTTGATGTGGGAAAA+TGG	+	Chr6:85612052-85612071	None:intergenic	35.0%
!!	TATAACGTCGGTTCAATCTT+TGG	-	Chr6:85613736-85613755	MsG0680034318.01.T01:intron	35.0%
!!	TGAATTGTTGTTTGAGAGTG+AGG	+	Chr6:85611991-85612010	None:intergenic	35.0%
!!!	GGATCTTATTTTGCAGTTGA+TGG	-	Chr6:85614220-85614239	MsG0680034318.01.T01:intron	35.0%
	AAATGATCTGCGAGCATCAA+GGG	-	Chr6:85614636-85614655	MsG0680034318.01.T01:CDS	40.0%
	AAGTGCTTGTCATGATAAGC+AGG	-	Chr6:85613378-85613397	MsG0680034318.01.T01:intron	40.0%
	AATGTCAACAGTATCCGTGT+CGG	+	Chr6:85612952-85612971	None:intergenic	40.0%
	ATAGAAGAAACTCGTAGCCA+AGG	+	Chr6:85614454-85614473	None:intergenic	40.0%
	ATGGCACACAAAATCCTCTT+CGG	-	Chr6:85611953-85611972	MsG0680034318.01.T01:CDS	40.0%
	ATGGGTACATTCAAAACCTC+TGG	-	Chr6:85612178-85612197	MsG0680034318.01.T01:intron	40.0%
	ATTAGGGCCATGAAATGTTC+AGG	-	Chr6:85614382-85614401	MsG0680034318.01.T01:CDS	40.0%
	CAGATGCTGCAAAATATCTC+GGG	-	Chr6:85614251-85614270	MsG0680034318.01.T01:intron	40.0%
	CGCTCTCTTATAGCTCTTAA+AGG	-	Chr6:85613299-85613318	MsG0680034318.01.T01:CDS	40.0%
	CTAATGAGACAGTGCGAAAT+GGG	-	Chr6:85612160-85612179	MsG0680034318.01.T01:intron	40.0%
	CTCCGAAGTCATCAATTAGA+GGG	-	Chr6:85614044-85614063	MsG0680034318.01.T01:intron	40.0%
	CTGTCTCATTAGGTCATCAT+CGG	+	Chr6:85612152-85612171	None:intergenic	40.0%
	GACCCGTAAGAAAATTGTGA+AGG	-	Chr6:85613151-85613170	MsG0680034318.01.T01:intron	40.0%
	GCCATGAAATGTTCAGGTAA+TGG	-	Chr6:85614388-85614407	MsG0680034318.01.T01:CDS	40.0%
	GTAATAAGTTCTCCCAATGC+AGG	-	Chr6:85613515-85613534	MsG0680034318.01.T01:intron	40.0%
	TAAATGATCTGCGAGCATCA+AGG	-	Chr6:85614635-85614654	MsG0680034318.01.T01:CDS	40.0%
	TCATATGTGTCCTGTTGTGT+AGG	-	Chr6:85613013-85613032	MsG0680034318.01.T01:intron	40.0%
	TGATGTGGGAAAATGGATGA+TGG	+	Chr6:85612045-85612064	None:intergenic	40.0%
	TTGTGGAGTGAAGTGAGATT+GGG	+	Chr6:85612075-85612094	None:intergenic	40.0%
	TTGTTTGAGAGTGAGGATGA+AGG	+	Chr6:85611984-85612003	None:intergenic	40.0%
!	AACAGGAATGCAAGCTCTTT+TGG	-	Chr6:85614199-85614218	MsG0680034318.01.T01:intron	40.0%
!	CACTTCTAAGGAAACACCAA+AGG	+	Chr6:85613584-85613603	None:intergenic	40.0%
!	GACCCTCTAATTGATGACTT+CGG	+	Chr6:85614049-85614068	None:intergenic	40.0%
!	TAAGAGCTATAAGAGAGCGT+AGG	+	Chr6:85613298-85613317	None:intergenic	40.0%
!	TAATTGATGACTTCGGAGGA+AGG	+	Chr6:85614042-85614061	None:intergenic	40.0%
!	TCATTAGGTCATCATCGGTT+AGG	+	Chr6:85612147-85612166	None:intergenic	40.0%
!!	AGATTGGGCGAATTTTGATG+TGG	+	Chr6:85612060-85612079	None:intergenic	40.0%
!!	CTCTTGGATTAGTTATGTCC+CGG	+	Chr6:85613051-85613070	None:intergenic	40.0%
!!	GATTGGGCGAATTTTGATGT+GGG	+	Chr6:85612059-85612078	None:intergenic	40.0%
!!	TGGTGTTGCTAATTATGTGC+AGG	-	Chr6:85614554-85614573	MsG0680034318.01.T01:CDS	40.0%
	AAAATTGGTCGGACGGAAAG+TGG	-	Chr6:85612925-85612944	MsG0680034318.01.T01:intron	45.0%
	ACATGTGTCAGAGTTGTGTC+CGG	+	Chr6:85613813-85613832	None:intergenic	45.0%
	ACATTCAAAACCTCTGGTCC+TGG	-	Chr6:85612184-85612203	MsG0680034318.01.T01:intron	45.0%
	ATGGTCTCAAGTGTGTACCA+TGG	-	Chr6:85614413-85614432	MsG0680034318.01.T01:CDS	45.0%
	CCATTTCGCACTGTCTCATT+AGG	+	Chr6:85612162-85612181	None:intergenic	45.0%
	CCTAATGAGACAGTGCGAAA+TGG	-	Chr6:85612159-85612178	MsG0680034318.01.T01:intron	45.0%
	CCTCCGAAGTCATCAATTAG+AGG	-	Chr6:85614043-85614062	MsG0680034318.01.T01:intron	45.0%
	CGGGACATAACTAATCCAAG+AGG	-	Chr6:85613049-85613068	MsG0680034318.01.T01:intron	45.0%
	CGTCTTAAACACTTACCCAC+TGG	-	Chr6:85612241-85612260	MsG0680034318.01.T01:intron	45.0%
	GGCGTTTAATTGCTGAAGCA+CGG	+	Chr6:85613277-85613296	None:intergenic	45.0%
	GGGCCTGAAAATTCATTCCT+TGG	-	Chr6:85614434-85614453	MsG0680034318.01.T01:CDS	45.0%
	GTCTGGAAAAATTGGTCGGA+CGG	-	Chr6:85612918-85612937	MsG0680034318.01.T01:intron	45.0%
	GTGTCCATGCTTCATATGTC+TGG	-	Chr6:85612901-85612920	MsG0680034318.01.T01:intron	45.0%
	GTTGTGGAGTGAAGTGAGAT+TGG	+	Chr6:85612076-85612095	None:intergenic	45.0%
	TATGAAGCATGGACACTCCT+CGG	+	Chr6:85612897-85612916	None:intergenic	45.0%
	TGGTCTCAAGTGTGTACCAT+GGG	-	Chr6:85614414-85614433	MsG0680034318.01.T01:CDS	45.0%
	TTATTACGATGCTGACCACC+AGG	+	Chr6:85612205-85612224	None:intergenic	45.0%
	TTGAGAGTGAGGATGAAGGT+TGG	+	Chr6:85611980-85611999	None:intergenic	45.0%
	TTGTCGACATACCTAATCCG+AGG	-	Chr6:85612877-85612896	MsG0680034318.01.T01:intron	45.0%
!	ATGATGGAGAAAGTGGTGGT+GGG	+	Chr6:85612029-85612048	None:intergenic	45.0%
!	ATGATTTTTCTAGGCTGGCG+AGG	-	Chr6:85613232-85613251	MsG0680034318.01.T01:intron	45.0%
!	CCTCTAATTGATGACTTCGG+AGG	+	Chr6:85614046-85614065	None:intergenic	45.0%
!	CGAAGTACTAAAACAGACGC+CGG	-	Chr6:85613791-85613810	MsG0680034318.01.T01:intron	45.0%
!!	ATGGATGATGGAGAAAGTGG+TGG	+	Chr6:85612033-85612052	None:intergenic	45.0%
!!	GGAATGAATTTTCAGGCCCA+TGG	+	Chr6:85614433-85614452	None:intergenic	45.0%
!!	TATCTACTGGAGCACTGTCT+CGG	-	Chr6:85614578-85614597	MsG0680034318.01.T01:CDS	45.0%
	AACCTGAGCGATGATACCAG+TGG	+	Chr6:85612260-85612279	None:intergenic	50.0%
	ACCTGAGCGATGATACCAGT+GGG	+	Chr6:85612259-85612278	None:intergenic	50.0%
	AGGATCTGAAGAAGCTCTCG+AGG	+	Chr6:85614022-85614041	None:intergenic	50.0%
	AGTGACACTCGACTGAAGCA+CGG	+	Chr6:85613078-85613097	None:intergenic	50.0%
	ATCTGAAGAAGCTCTCGAGG+CGG	+	Chr6:85614019-85614038	None:intergenic	50.0%
	GAGGCGGTGAATAAGCATCA+AGG	+	Chr6:85614003-85614022	None:intergenic	50.0%
	GTGTCCTGTTGTGTAGGTGT+CGG	-	Chr6:85613019-85613038	MsG0680034318.01.T01:intron	50.0%
	TTCAAAACCTCTGGTCCTGG+TGG	-	Chr6:85612187-85612206	MsG0680034318.01.T01:intron	50.0%
!	CATTGAGGGCCCGTTTGTTA+CGG	+	Chr6:85612837-85612856	None:intergenic	50.0%
!	GGTCATCATCGGTTAGGTCT+AGG	+	Chr6:85612141-85612160	None:intergenic	50.0%
!	TTTTCTAGGCTGGCGAGGAT+CGG	-	Chr6:85613237-85613256	MsG0680034318.01.T01:intron	50.0%
!!	GATGATGGAGAAAGTGGTGG+TGG	+	Chr6:85612030-85612049	None:intergenic	50.0%
	ACACGACACATCTGCAGCGT+CGG	-	Chr6:85613838-85613857	MsG0680034318.01.T01:intron	55.0%
	ACCCACTGGTATCATCGCTC+AGG	-	Chr6:85612255-85612274	MsG0680034318.01.T01:intron	55.0%
	ACTGAAGCACGGACACCTCT+TGG	+	Chr6:85613067-85613086	None:intergenic	55.0%
	GCATGGACACTCCTCGGATT+AGG	+	Chr6:85612891-85612910	None:intergenic	55.0%
	GTGTCCGACACCTACACAAC+AGG	+	Chr6:85613026-85613045	None:intergenic	55.0%
	TTAGGTCTAGGTAACCGCCG+TGG	+	Chr6:85612129-85612148	None:intergenic	55.0%
!	GGATGAAGGTTGGTCCGAAG+AGG	+	Chr6:85611970-85611989	None:intergenic	55.0%
!!	GTGTAGGTGTCGGACACTAC+CGG	-	Chr6:85613029-85613048	MsG0680034318.01.T01:intron	55.0%
!!	TGTAGGTGTCGGACACTACC+GGG	-	Chr6:85613030-85613049	MsG0680034318.01.T01:intron	55.0%
	ATGCTGACCACCAGGACCAG+AGG	+	Chr6:85612197-85612216	None:intergenic	60.0%
	GGACGGAAAGTGGACCGACA+CGG	-	Chr6:85612935-85612954	MsG0680034318.01.T01:intron	60.0%
	GTCTAGGTAACCGCCGTGGT+TGG	+	Chr6:85612125-85612144	None:intergenic	60.0%
	TAGGTAACCGCCGTGGTTGG+CGG	+	Chr6:85612122-85612141	None:intergenic	60.0%
!!	CTGCAGCGTCGGTGCTACAT+TGG	-	Chr6:85613849-85613868	MsG0680034318.01.T01:intron	60.0%
!!	GGTGGTGGTGGTTGGTGTTG+TGG	+	Chr6:85612092-85612111	None:intergenic	60.0%
	GTAACCGCCGTGGTTGGCGG+CGG	+	Chr6:85612119-85612138	None:intergenic	70.0%
!	ACCGCCGCCGCCGCCAACCA+CGG	-	Chr6:85612109-85612128	MsG0680034318.01.T01:intron	80.0%
!	ACCGCCGTGGTTGGCGGCGG+CGG	+	Chr6:85612116-85612135	None:intergenic	80.0%
!!!	GCGGCGGCGGTGGTGGTGGT+TGG	+	Chr6:85612100-85612119	None:intergenic	80.0%
!	GCCGCCGCCGCCAACCACGG+CGG	-	Chr6:85612112-85612131	MsG0680034318.01.T01:intron	85.0%
!	GCCGTGGTTGGCGGCGGCGG+CGG	+	Chr6:85612113-85612132	None:intergenic	85.0%
!	GTGGTTGGCGGCGGCGGCGG+TGG	+	Chr6:85612110-85612129	None:intergenic	85.0%
!	GTTGGCGGCGGCGGCGGTGG+TGG	+	Chr6:85612107-85612126	None:intergenic	85.0%
!!	GGCGGCGGCGGCGGTGGTGG+TGG	+	Chr6:85612104-85612123	None:intergenic	90.0%

Chromosome	Type	Strat	End	Strand	Name
Chr6	gene	85611929	85614681	85611929	ID=MsG0680034318.01;Name=MsG0680034318.01
Chr6	mRNA	85611929	85614681	85611929	ID=MsG0680034318.01.T01;Parent=MsG0680034318.01;Name=MsG0680034318.01.T01;_AED=0.46;_eAED=0.48;_QI=24\|0.25\|0.2\|1\|0.25\|0.6\|5\|0\|218
Chr6	exon	85611929	85612034	85611929	ID=MsG0680034318.01.T01:exon:18086;Parent=MsG0680034318.01.T01
Chr6	exon	85612338	85612406	85612338	ID=MsG0680034318.01.T01:exon:18085;Parent=MsG0680034318.01.T01
Chr6	exon	85612545	85612626	85612545	ID=MsG0680034318.01.T01:exon:18084;Parent=MsG0680034318.01.T01
Chr6	exon	85613290	85613365	85613290	ID=MsG0680034318.01.T01:exon:18083;Parent=MsG0680034318.01.T01
Chr6	exon	85614334	85614681	85614334	ID=MsG0680034318.01.T01:exon:18082;Parent=MsG0680034318.01.T01
Chr6	five_prime_UTR	85614658	85614681	85614658	ID=MsG0680034318.01.T01:five_prime_utr;Parent=MsG0680034318.01.T01
Chr6	CDS	85614334	85614657	85614334	ID=MsG0680034318.01.T01:cds;Parent=MsG0680034318.01.T01
Chr6	CDS	85613290	85613365	85613290	ID=MsG0680034318.01.T01:cds;Parent=MsG0680034318.01.T01
Chr6	CDS	85612545	85612626	85612545	ID=MsG0680034318.01.T01:cds;Parent=MsG0680034318.01.T01
Chr6	CDS	85612338	85612406	85612338	ID=MsG0680034318.01.T01:cds;Parent=MsG0680034318.01.T01
Chr6	CDS	85611929	85612034	85611929	ID=MsG0680034318.01.T01:cds;Parent=MsG0680034318.01.T01

Gene Sequence

>MsG0680034318.01.T01

ATGGCACACAAAATCCTCTTCGGACCAACCTTCATCCTCACTCTCAAACAACAATTCACAACAACAACACAAACCCACCACCACTTTCTCCATCATCCATTTTCCCACATCAAAATTCGCCCAATCTCACTTCACTCCACAACACCAACCACCACCACCGCCGCCGCCGCCAACCACGGCGGTTACCTAGACCTAACCGATGATGACCTAATGAGACAGTGCGAAATGGGTACATTCAAAACCTCTGGTCCTGGTGGTCAGCATCGTAATAAACGCGAATCTGCTGTTCGTCTTAAACACTTACCCACTGGTATCATCGCTCAGGCTGGCGAGGATCGGTCTCAGCATATGAACCGTGCTTCAGCAATTAAACGCCTACGCTCTCTTATAGCTCTTAAAGTCAGGAAAACAATAGACCTTGATGCTTATTCACCGCCTCGAGAGCTTCTTCAGATCCTTCCTCCGAAGTCATCAATTAGAGGGAATGCAAGCTCTTTTGGATCTTATTTTGCAGTTGATGGATCTGTCTCAGATGCTGCAAAATATCTCGGGTTATCTACTGGAGCACTGTCTCGGTTAATCTTATCTGATGATTCGCTTAGAAAGGAAGTAAATGATCTGCGAGCATCAAGGGTAAACCTTCTGATGTTTTACTGA

Protein sequence

>MsG0680034318.01.T01

MAHKILFGPTFILTLKQQFTTTTQTHHHFLHHPFSHIKIRPISLHSTTPTTTTAAAANHGGYLDLTDDDLMRQCEMGTFKTSGPGGQHRNKRESAVRLKHLPTGIIAQAGEDRSQHMNRASAIKRLRSLIALKVRKTIDLDAYSPPRELLQILPPKSSIRGNASSFGSYFAVDGSVSDAAKYLGLSTGALSRLILSDDSLRKEVNDLRASRVNLLMFY*