AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480023244.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023244.01.T01 MTR_8g089810 87.037 54 7 0 42 95 433 486 2.01e-24 99.4
MsG0480023244.01.T01 MTR_8g089810 94.286 35 2 0 5 39 246 280 2.36e-15 73.2
MsG0480023244.01.T01 MTR_8g089810 94.286 35 2 0 5 39 246 280 2.04e-15 73.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023244.01.T01 AT1G67840 53.125 64 30 0 32 95 429 492 3.44e-14 69.7

Find 57 sgRNAs with CRISPR-Local

Find 412 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCTCCAAGTGGAGCATCTT+TGG 0.305623 4:-82586779 None:intergenic
GACTATTGCCCGGGAGATAC+TGG 0.314615 4:+82586717 MsG0480023242.01.T01:CDS
ATGACGTGGAACTTTGTTGC+TGG 0.399374 4:+82586691 MsG0480023242.01.T01:CDS
CTGAAAGCCTGGCGCAGAGC+AGG 0.408438 4:-82585893 None:intergenic
AATGTATTACATCATATAAC+AGG 0.414430 4:+82587077 MsG0480023244.01.T01:three_prime_UTR
AGAACTCTTGGCTGAAGATA+TGG 0.415896 4:+82586658 MsG0480023242.01.T01:CDS
CAAGTGGAGCATCTTTGGTC+CGG 0.421288 4:-82586774 None:intergenic
ATGCAATGTTTCTGAAGTAT+TGG 0.436879 4:+82585772 MsG0480023242.01.T01:CDS
AAAGATGCTCCACTTGGAGC+TGG 0.439507 4:+82586781 MsG0480023242.01.T01:CDS
AAGTGGAGCATCTTTGGTCC+GGG 0.440131 4:-82586773 None:intergenic
TGTTGACATTTCACAGTCTC+TGG 0.441936 4:+82583946 MsG0480023242.01.T01:CDS
CGGAGTAAAGCACCTTCATA+AGG 0.446246 4:-82585919 None:intergenic
CCGTCTAGAATAAGATTGTA+TGG 0.468806 4:+82586934 MsG0480023244.01.T01:three_prime_UTR
TCATGGGAAATTCGACTCTT+CGG 0.471284 4:+82583867 MsG0480023242.01.T01:CDS
CCTTTCCTCCAACATGTGTT+CGG 0.472155 4:-82585939 None:intergenic
GATATATAGAATGAGTTTGA+AGG 0.478153 4:+82586848 MsG0480023244.01.T01:three_prime_UTR
TGGGAACTCGTGTAGAACTT+TGG 0.478659 4:+82586801 MsG0480023244.01.T01:exon
TGCTGGGCTGACTATTGCCC+GGG 0.486262 4:+82586708 MsG0480023242.01.T01:CDS
TTCTGAAGTATTGGCAGACT+TGG 0.488198 4:+82585781 MsG0480023242.01.T01:CDS
CGGGAGATACTGGAGAGTTA+TGG 0.488539 4:+82586727 MsG0480023242.01.T01:CDS
TTGCTGGGCTGACTATTGCC+CGG 0.489104 4:+82586707 MsG0480023242.01.T01:CDS
GGCTTTCAGCAACCTTATGA+AGG 0.489812 4:+82585907 MsG0480023242.01.T01:CDS
TAGACGGTTTCTCAACTCTC+AGG 0.497089 4:-82586918 None:intergenic
CTCTGGCTATGGCATATGTA+TGG 0.499639 4:+82583963 MsG0480023242.01.T01:intron
CATTTCACAGTCTCTGGCTA+TGG 0.502587 4:+82583952 MsG0480023242.01.T01:CDS
GTGAAGTTGCACATACCAAC+CGG 0.505078 4:-82583902 None:intergenic
GCTATGGCATATGTATGGTC+AGG 0.507136 4:+82583968 MsG0480023242.01.T01:intron
TCAGATTTAACAACTGCCAT+TGG 0.509352 4:-82586827 None:intergenic
TCATAAGGTTGCTGAAAGCC+TGG 0.512585 4:-82585904 None:intergenic
AGAAGAACCTGCTCTGCGCC+AGG 0.520287 4:+82585886 MsG0480023242.01.T01:CDS
CGGACCAAAGATGCTCCACT+TGG 0.520699 4:+82586775 MsG0480023242.01.T01:CDS
ACCATACGGACAAGAACTCT+TGG 0.521168 4:+82586646 MsG0480023242.01.T01:CDS
TGACGTGGAACTTTGTTGCT+GGG 0.521578 4:+82586692 MsG0480023242.01.T01:CDS
AAATTCGACTCTTCGGATCA+AGG 0.527819 4:+82583874 MsG0480023242.01.T01:CDS
GCCAAGAGTTCTTGTCCGTA+TGG 0.528876 4:-82586647 None:intergenic
TTACAAACTAATATACAGAC+TGG 0.537901 4:-82587000 None:intergenic
GCTTTACTCCGAACACATGT+TGG 0.544894 4:+82585931 MsG0480023242.01.T01:intron
CATAACTCTCCAGTATCTCC+CGG 0.547762 4:-82586726 None:intergenic
AACAGCATTTGATCTTTGAT+CGG 0.550290 4:-82583927 None:intergenic
AACTCTCAGGTGCTGTGAGG+CGG 0.559663 4:-82586905 None:intergenic
TTACTCCGAACACATGTTGG+AGG 0.561301 4:+82585934 MsG0480023242.01.T01:intron
CCATACAATCTTATTCTAGA+CGG 0.561875 4:-82586934 None:intergenic
TGTAGAACTTTGGCTTCCAA+TGG 0.561959 4:+82586811 MsG0480023244.01.T01:exon
AAGATGCTCCACTTGGAGCT+GGG 0.567585 4:+82586782 MsG0480023242.01.T01:CDS
TCTTCGGATCAAGGATGAGC+CGG 0.572529 4:+82583883 MsG0480023242.01.T01:CDS
AGATGCATTCACTCACCATA+CGG 0.592475 4:+82586632 MsG0480023242.01.T01:CDS
CCGAACACATGTTGGAGGAA+AGG 0.593615 4:+82585939 MsG0480023242.01.T01:intron
CACGAGTTCCCAGCTCCAAG+TGG 0.605796 4:-82586790 None:intergenic
ATAACTCTCCAGTATCTCCC+GGG 0.614715 4:-82586725 None:intergenic
TCTTCTACAGCAGCTAGCAA+AGG 0.616929 4:-82585869 None:intergenic
CGGATCAAGGATGAGCCGGT+TGG 0.628083 4:+82583887 MsG0480023242.01.T01:CDS
AATACTTCAGAAACATTGCA+TGG 0.636997 4:-82585770 None:intergenic
CTCAACTCTCAGGTGCTGTG+AGG 0.647890 4:-82586908 None:intergenic
AGTGGAGCATCTTTGGTCCG+GGG 0.648290 4:-82586772 None:intergenic
TACATCATATAACAGGCGTG+TGG 0.659638 4:+82587084 MsG0480023244.01.T01:three_prime_UTR
ATGGTTGAAGACATATGACG+TGG 0.719720 4:+82586677 MsG0480023242.01.T01:CDS
TCGTGCGCATTATATCACCC+CGG 0.768678 4:+82586755 MsG0480023242.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAACAATATTATTACCTTT+AGG + Chr4:82585639-82585658 MsG0480023242.01.T01:intron 15.0%
!! AAACAATATTATTACCTTTA+GGG + Chr4:82585640-82585659 MsG0480023242.01.T01:intron 15.0%
!! TAAACTTAAAATCAACTAAA+AGG + Chr4:82585104-82585123 MsG0480023242.01.T01:intron 15.0%
!!! ATTTAGAGTTTGTTTAAATT+TGG - Chr4:82589469-82589488 None:intergenic 15.0%
!!! CAAAAATTTAATCTTTTCAA+AGG + Chr4:82588656-82588675 MsG0480023244.01.T01:intron 15.0%
!!! GAAAAGATTAAATTTTTGTT+TGG - Chr4:82588654-82588673 None:intergenic 15.0%
!!! TAGAAATTTGTTTAGAATTA+GGG - Chr4:82589357-82589376 None:intergenic 15.0%
!!! TTAGAAATTTGTTTAGAATT+AGG - Chr4:82589358-82589377 None:intergenic 15.0%
!!! TTTATGTAGTTATCATTTTA+GGG - Chr4:82589227-82589246 None:intergenic 15.0%
!! AAATCAATCAAGAAAATGAA+TGG + Chr4:82585304-82585323 MsG0480023242.01.T01:intron 20.0%
!! AACTATCATTACATTACATT+CGG + Chr4:82588097-82588116 MsG0480023244.01.T01:intron 20.0%
!! AATGTATTACATCATATAAC+AGG + Chr4:82587077-82587096 MsG0480023244.01.T01:three_prime_UTR 20.0%
!! CATAATTATATACACATTGA+AGG - Chr4:82585565-82585584 None:intergenic 20.0%
!! GTTAATAAAATGCATAAATC+TGG + Chr4:82585393-82585412 MsG0480023242.01.T01:intron 20.0%
!! TGAAGATAAAAAATTTCCAA+AGG - Chr4:82584922-82584941 None:intergenic 20.0%
!! TTATATTATTGATGCAACAT+TGG - Chr4:82585621-82585640 None:intergenic 20.0%
!! TTGAAATAAGAAAATAATGC+AGG + Chr4:82585204-82585223 MsG0480023242.01.T01:intron 20.0%
!!! CAAAAATGTATTCTTTTCAA+AGG - Chr4:82588548-82588567 None:intergenic 20.0%
!!! GAAAAGAATACATTTTTGTT+AGG + Chr4:82588550-82588569 MsG0480023244.01.T01:intron 20.0%
!!! GTTTATGTAGTTATCATTTT+AGG - Chr4:82589228-82589247 None:intergenic 20.0%
!!! TTATTATTAGGGTGATTTTA+TGG - Chr4:82586415-82586434 None:intergenic 20.0%
!!! TTTAGTTTTTGATACTTGTA+TGG + Chr4:82584263-82584282 MsG0480023242.01.T01:intron 20.0%
!!! TTTGTTTAAATTTGGTGTTT+TGG - Chr4:82589461-82589480 None:intergenic 20.0%
!!! TTTGTTTCTTATTAGTTCTA+GGG - Chr4:82587468-82587487 None:intergenic 20.0%
! AACTATTATCACACATATGT+GGG + Chr4:82584859-82584878 MsG0480023242.01.T01:intron 25.0%
! AAGTTTATAGAGAGACAAAT+TGG - Chr4:82585091-82585110 None:intergenic 25.0%
! AATTATCTTACCTTTGAATG+AGG + Chr4:82588142-82588161 MsG0480023244.01.T01:intron 25.0%
! ATCAAAGATTGTTTAGGTAA+AGG - Chr4:82586506-82586525 None:intergenic 25.0%
! ATCTTATTCATTTCCTTGAT+TGG + Chr4:82584998-82585017 MsG0480023242.01.T01:intron 25.0%
! CAAACATTTAATCAAACACT+TGG + Chr4:82589182-82589201 MsG0480023244.01.T01:intron 25.0%
! CAAGAAATTAACACTTAGAA+TGG + Chr4:82588332-82588351 MsG0480023244.01.T01:intron 25.0%
! CAAGAATTTAACATTTGGAA+TGG - Chr4:82588223-82588242 None:intergenic 25.0%
! GAAGGAAAAAAAAAAAGGAA+AGG - Chr4:82584125-82584144 None:intergenic 25.0%
! GACAACAAGAATTTAACATT+TGG - Chr4:82588228-82588247 None:intergenic 25.0%
! GATATATAGAATGAGTTTGA+AGG + Chr4:82586848-82586867 MsG0480023244.01.T01:three_prime_UTR 25.0%
! GCTATAGAGAAATCAATTTA+AGG - Chr4:82584204-82584223 None:intergenic 25.0%
! TACTCAATCAAAGATTGTTT+AGG - Chr4:82586512-82586531 None:intergenic 25.0%
! TCAAAGATTGTTTAGGTAAA+GGG - Chr4:82586505-82586524 None:intergenic 25.0%
! TCTAAGTGTTAATTTCTTGT+TGG - Chr4:82588331-82588350 None:intergenic 25.0%
! TGTTCGAAGGAAAAAAAAAA+AGG - Chr4:82584130-82584149 None:intergenic 25.0%
! TTACAAACTAATATACAGAC+TGG - Chr4:82587003-82587022 None:intergenic 25.0%
! TTATTCATTCGTTGTGTAAT+TGG + Chr4:82584695-82584714 MsG0480023242.01.T01:intron 25.0%
! TTGGAAGGAGATTATTATTA+GGG - Chr4:82586426-82586445 None:intergenic 25.0%
! TTGGATGATAGTAAAGTTTA+GGG - Chr4:82585131-82585150 None:intergenic 25.0%
! TTTGGAAGGAGATTATTATT+AGG - Chr4:82586427-82586446 None:intergenic 25.0%
!! AATGTATTCTTTTCAAAGGA+AGG - Chr4:82588544-82588563 None:intergenic 25.0%
!! AATTCGAATAAATTTTGCGT+TGG + Chr4:82587945-82587964 MsG0480023244.01.T01:intron 25.0%
!! ATGTTAAATTCTTGTTGTCT+TGG + Chr4:82588229-82588248 MsG0480023244.01.T01:intron 25.0%
!! ATTTGAACTTGAAGGAATTT+TGG + Chr4:82589588-82589607 MsG0480023244.01.T01:intron 25.0%
!! CTTTGTTTAGATAATGACAT+GGG + Chr4:82584009-82584028 MsG0480023242.01.T01:intron 25.0%
!! CTTTGTTTCTTATTAGTTCT+AGG - Chr4:82587469-82587488 None:intergenic 25.0%
!! GTATGATATCTTTTAAACCT+AGG + Chr4:82586476-82586495 MsG0480023242.01.T01:intron 25.0%
!! TAATCACATATTTTCTGAGT+CGG + Chr4:82585330-82585349 MsG0480023242.01.T01:intron 25.0%
!! TAGTCTATTTTATGGTTATG+TGG + Chr4:82587038-82587057 MsG0480023244.01.T01:intron 25.0%
!! TTGTTGCATAGTCTATTTTA+TGG + Chr4:82587030-82587049 MsG0480023244.01.T01:intron 25.0%
!!! AGATTAAATTTTTGTTTGGC+TGG - Chr4:82588650-82588669 None:intergenic 25.0%
!!! CAATCTCTAGTTTGTTAAAA+AGG - Chr4:82586089-82586108 None:intergenic 25.0%
!!! GGAAATTAGTGCTTATTTTT+TGG + Chr4:82586289-82586308 MsG0480023242.01.T01:intron 25.0%
!!! GTTTTTTGATTTGAACTTGA+AGG + Chr4:82589580-82589599 MsG0480023244.01.T01:intron 25.0%
!!! TTTAAATTTGGTGTTTTGGA+AGG - Chr4:82589457-82589476 None:intergenic 25.0%
AACAGCATTTGATCTTTGAT+CGG - Chr4:82583930-82583949 None:intergenic 30.0%
AACTTATTTGATACCCTCTT+CGG + Chr4:82587311-82587330 MsG0480023244.01.T01:intron 30.0%
AAGAAAATAATGCAGGTACA+TGG + Chr4:82585211-82585230 MsG0480023242.01.T01:intron 30.0%
AATACTTCAGAAACATTGCA+TGG - Chr4:82585773-82585792 None:intergenic 30.0%
AATGTTCTACAAGTACATAG+AGG - Chr4:82584959-82584978 None:intergenic 30.0%
AATTGAGTACTTTGTTGCAT+GGG + Chr4:82586560-82586579 MsG0480023242.01.T01:intron 30.0%
AATTGTTAGATAGTTCTCCA+AGG + Chr4:82585361-82585380 MsG0480023242.01.T01:intron 30.0%
ACATTTAATCAAACACTTGG+TGG + Chr4:82589185-82589204 MsG0480023244.01.T01:intron 30.0%
ACCTAACATGCAAACATAAA+AGG + Chr4:82589516-82589535 MsG0480023244.01.T01:intron 30.0%
ACGATTTCATGACAGTTATA+AGG + Chr4:82584234-82584253 MsG0480023242.01.T01:intron 30.0%
ACTATTATCACACATATGTG+GGG + Chr4:82584860-82584879 MsG0480023242.01.T01:intron 30.0%
AGATAATTGTTGTAGTTGGA+AGG - Chr4:82588130-82588149 None:intergenic 30.0%
AGCAAAATTAGAACATGCTA+AGG - Chr4:82584434-82584453 None:intergenic 30.0%
ATACTCTCACAGTAGAAAAA+TGG - Chr4:82585171-82585190 None:intergenic 30.0%
ATCATCATCAATAAGTACGA+GGG - Chr4:82586001-82586020 None:intergenic 30.0%
ATGCAAACATAAAAGGTCAA+TGG + Chr4:82589523-82589542 MsG0480023244.01.T01:intron 30.0%
ATTCAAACTAGTTAAATGGC+AGG - Chr4:82588387-82588406 None:intergenic 30.0%
ATTGTTAGATAGTTCTCCAA+GGG + Chr4:82585362-82585381 MsG0480023242.01.T01:intron 30.0%
CAACAATTTCTTGTAGATCA+AGG - Chr4:82585029-82585048 None:intergenic 30.0%
CAACATTGGAGTTTATAAGA+CGG - Chr4:82585607-82585626 None:intergenic 30.0%
CAACTATTATCACACATATG+TGG + Chr4:82584858-82584877 MsG0480023242.01.T01:intron 30.0%
CCATACAATCTTATTCTAGA+CGG - Chr4:82586937-82586956 None:intergenic 30.0%
CTCAAAAAGAAAAACCCTAA+AGG - Chr4:82585657-82585676 None:intergenic 30.0%
GAAGGAAATCATACAATGTT+AGG - Chr4:82589439-82589458 None:intergenic 30.0%
GATTTCATATGACATTGTTG+AGG + Chr4:82584751-82584770 MsG0480023242.01.T01:intron 30.0%
GCACTAATTTCCTCAAAAAA+TGG - Chr4:82586281-82586300 None:intergenic 30.0%
GGTAAGATAATTGTTGTAGT+TGG - Chr4:82588134-82588153 None:intergenic 30.0%
GGTCATTCAAACTAGTTAAA+TGG - Chr4:82588391-82588410 None:intergenic 30.0%
GTTGAATTAACCTCATTCAA+AGG - Chr4:82588155-82588174 None:intergenic 30.0%
GTTGGATGATAGTAAAGTTT+AGG - Chr4:82585132-82585151 None:intergenic 30.0%
TAAGACAATTGTTGTGTAGT+TGG - Chr4:82588455-82588474 None:intergenic 30.0%
TAATGTCAGGATGAATAATC+TGG + Chr4:82584362-82584381 MsG0480023242.01.T01:CDS 30.0%
TAATTGAGTACTTTGTTGCA+TGG + Chr4:82586559-82586578 MsG0480023242.01.T01:intron 30.0%
TCAGGTTTATATACTTCATC+TGG + Chr4:82583986-82584005 MsG0480023242.01.T01:intron 30.0%
TCATCTACGTTACATTACAT+TGG + Chr4:82588036-82588055 MsG0480023244.01.T01:intron 30.0%
TCATGAAATCGTACAACAAA+CGG - Chr4:82584226-82584245 None:intergenic 30.0%
TGAAAAAATGTGAGGAAAAG+AGG + Chr4:82587520-82587539 MsG0480023244.01.T01:intron 30.0%
TGACATAGTAAAGTTTAACC+AGG - Chr4:82584625-82584644 None:intergenic 30.0%
TTCAATGATTCAATGTTCGA+AGG - Chr4:82584143-82584162 None:intergenic 30.0%
! AAGTATGTGAGGGTTTTTAT+AGG + Chr4:82587543-82587562 MsG0480023244.01.T01:intron 30.0%
! ACCTTTTATGTTTGCATGTT+AGG - Chr4:82589520-82589539 None:intergenic 30.0%
! AGTATGTGAGGGTTTTTATA+GGG + Chr4:82587544-82587563 MsG0480023244.01.T01:intron 30.0%
! ATTTGGAACGTTTAATTCCA+TGG + Chr4:82586164-82586183 MsG0480023242.01.T01:intron 30.0%
! TGTGTGTAGATTTGAAACAA+TGG - Chr4:82589129-82589148 None:intergenic 30.0%
! TGTTGTTGTTGTAATTCCAT+GGG + Chr4:82586228-82586247 MsG0480023242.01.T01:intron 30.0%
! TTGTTGTTGTTGTAATTCCA+TGG + Chr4:82586227-82586246 MsG0480023242.01.T01:intron 30.0%
! TTTGGAACGTTTAATTCCAT+GGG + Chr4:82586165-82586184 MsG0480023242.01.T01:intron 30.0%
!! AAATAAGTTTTGACCTCAAG+AGG - Chr4:82587300-82587319 None:intergenic 30.0%
!! AATAAGTTTTGACCTCAAGA+GGG - Chr4:82587299-82587318 None:intergenic 30.0%
!! AATTGTCTTACCTCTGAAAT+GGG + Chr4:82588465-82588484 MsG0480023244.01.T01:intron 30.0%
!! ATGCAATGTTTCTGAAGTAT+TGG + Chr4:82585772-82585791 MsG0480023242.01.T01:CDS 30.0%
!! CATGAGAACTTACTTGTTAT+TGG + Chr4:82589554-82589573 MsG0480023244.01.T01:intron 30.0%
!! GCTTTGTTTAGATAATGACA+TGG + Chr4:82584008-82584027 MsG0480023242.01.T01:intron 30.0%
!!! CTTTAGGGTTTTTCTTTTTG+AGG + Chr4:82585655-82585674 MsG0480023242.01.T01:intron 30.0%
!!! TATGCTTTTTTGTTGATGTC+AGG + Chr4:82585743-82585762 MsG0480023242.01.T01:intron 30.0%
!!! TTTTTTTTAATGCCCTCTTG+AGG + Chr4:82587284-82587303 MsG0480023244.01.T01:intron 30.0%
AAAACATTCTCATGACCTGT+GGG + Chr4:82586138-82586157 MsG0480023242.01.T01:intron 35.0%
AAAACGTGACGAGTATGTTT+GGG - Chr4:82588886-82588905 None:intergenic 35.0%
AACAATTGTCTTCCTTTGGA+TGG - Chr4:82588414-82588433 None:intergenic 35.0%
AAGGTTTGAATGCTTGAAAG+TGG - Chr4:82584483-82584502 None:intergenic 35.0%
AATGTTTGAGTCCTGTTGTT+TGG - Chr4:82588505-82588524 None:intergenic 35.0%
AATTCAACTTGCCAAACAAC+AGG + Chr4:82588491-82588510 MsG0480023244.01.T01:intron 35.0%
ACAATTGTCTTCCTTTGGAT+GGG - Chr4:82588413-82588432 None:intergenic 35.0%
ACTTGTATGGACCTAAATTC+TGG + Chr4:82584276-82584295 MsG0480023242.01.T01:intron 35.0%
ACTTTCAAGCATTCAAACCT+TGG + Chr4:82584482-82584501 MsG0480023242.01.T01:CDS 35.0%
AGGAAGACAATTGTTGTAGT+TGG + Chr4:82588419-82588438 MsG0480023244.01.T01:intron 35.0%
AGGTATTAAGTGTCAAGGAA+TGG - Chr4:82588618-82588637 None:intergenic 35.0%
CAACATGGCAAAATAATGTC+AGG + Chr4:82584349-82584368 MsG0480023242.01.T01:CDS 35.0%
CAATTAATGAGTCCAAAACG+TGG + Chr4:82587582-82587601 MsG0480023244.01.T01:intron 35.0%
CATCATCATCAATAAGTACG+AGG - Chr4:82586002-82586021 None:intergenic 35.0%
CCATATCATTAATGTGCCTT+TGG + Chr4:82584903-82584922 MsG0480023242.01.T01:intron 35.0%
CTACAACAATTGTCTTCCTT+TGG - Chr4:82588418-82588437 None:intergenic 35.0%
CTTTCAAGCATTCAAACCTT+GGG + Chr4:82584483-82584502 MsG0480023242.01.T01:CDS 35.0%
GATCAAGGAAAATCCAATCA+AGG - Chr4:82585014-82585033 None:intergenic 35.0%
GGATGCTGTATATTTGACAA+AGG + Chr4:82584823-82584842 MsG0480023242.01.T01:CDS 35.0%
GGTGAGATGGTGATAATTTA+GGG - Chr4:82585070-82585089 None:intergenic 35.0%
GTAACATTGCTTTCTGCAAA+CGG - Chr4:82584320-82584339 None:intergenic 35.0%
GTTACCATATAGTGCATATC+AGG - Chr4:82586027-82586046 None:intergenic 35.0%
TAAAACATTCTCATGACCTG+TGG + Chr4:82586137-82586156 MsG0480023242.01.T01:intron 35.0%
TAAGTCACGCACAGATTATA+TGG + Chr4:82587738-82587757 MsG0480023244.01.T01:intron 35.0%
TAATTCAACTAGCTAACAGC+AGG + Chr4:82588166-82588185 MsG0480023244.01.T01:intron 35.0%
TATGTCAGTTCTATAACGAG+TGG + Chr4:82584638-82584657 MsG0480023242.01.T01:intron 35.0%
TATTTGGCATATACCGAAGA+GGG - Chr4:82587327-82587346 None:intergenic 35.0%
TCAGATTTAACAACTGCCAT+TGG - Chr4:82586830-82586849 None:intergenic 35.0%
TGACATTGTTGAGGATATCT+TGG + Chr4:82584760-82584779 MsG0480023242.01.T01:CDS 35.0%
TGCTAAGGCTAAGAATAAAG+AGG - Chr4:82584419-82584438 None:intergenic 35.0%
TGGTGAGATGGTGATAATTT+AGG - Chr4:82585071-82585090 None:intergenic 35.0%
TTGAATTTACCCCATTTCAG+AGG - Chr4:82588478-82588497 None:intergenic 35.0%
TTGCATGGGATTTGTGAAAA+TGG + Chr4:82586574-82586593 MsG0480023242.01.T01:intron 35.0%
TTGTCAAATATACAGCATCC+TGG - Chr4:82584823-82584842 None:intergenic 35.0%
TTTAACCAGGTTAGAAAGAG+TGG - Chr4:82584612-82584631 None:intergenic 35.0%
! AGAGTTTTTGTCCAATATGC+AGG + Chr4:82585259-82585278 MsG0480023242.01.T01:intron 35.0%
! CAATTGTCTTACCTCTGAAA+TGG + Chr4:82588464-82588483 MsG0480023244.01.T01:intron 35.0%
! CAGAATATTAGCCTGCATAT+TGG - Chr4:82585273-82585292 None:intergenic 35.0%
! CCAAAGGCACATTAATGATA+TGG - Chr4:82584906-82584925 None:intergenic 35.0%
! CCGTCTAGAATAAGATTGTA+TGG + Chr4:82586934-82586953 MsG0480023244.01.T01:three_prime_UTR 35.0%
! GATTGAGTACTTTTGTTGCA+AGG + Chr4:82586523-82586542 MsG0480023242.01.T01:intron 35.0%
! GCGATTTTAGATGAGAAATG+AGG + Chr4:82589646-82589665 MsG0480023244.01.T01:intron 35.0%
! GGTGATTTGAGAGAGATTTT+GGG + Chr4:82589616-82589635 MsG0480023244.01.T01:intron 35.0%
! GTATGTGAGGGTTTTTATAG+GGG + Chr4:82587545-82587564 MsG0480023244.01.T01:intron 35.0%
! GTGTAGATTTGAAACAATGG+CGG - Chr4:82589126-82589145 None:intergenic 35.0%
! TCACACTTCTTGGATTTTGT+TGG + Chr4:82584073-82584092 MsG0480023242.01.T01:intron 35.0%
! TGTAGATTTGAAACAATGGC+GGG - Chr4:82589125-82589144 None:intergenic 35.0%
! TGTTACTTCAGCAATCAACA+TGG + Chr4:82584334-82584353 MsG0480023242.01.T01:CDS 35.0%
! TTTTGCAGCAAGGAAATGTT+TGG - Chr4:82586445-82586464 None:intergenic 35.0%
!! ATTGTCTTACCTCTGAAATG+GGG + Chr4:82588466-82588485 MsG0480023244.01.T01:intron 35.0%
!! ATTTGTCTCACCTCTGAAAT+GGG - Chr4:82588740-82588759 None:intergenic 35.0%
!! CTCGTACTTATTGATGATGA+TGG + Chr4:82586000-82586019 MsG0480023242.01.T01:intron 35.0%
!! GATGAAGGTATTAAGTGTCA+AGG - Chr4:82588623-82588642 None:intergenic 35.0%
!! GTTTCTTATTAGTTCTAGGG+TGG - Chr4:82587465-82587484 None:intergenic 35.0%
!! TGTTGGCTTCGTTTAAATGA+TGG - Chr4:82588314-82588333 None:intergenic 35.0%
!!! AAGCTCAATTTTTTGCAGCA+AGG - Chr4:82586455-82586474 None:intergenic 35.0%
!!! ACAACTGATGCCATTTTTTG+AGG + Chr4:82586268-82586287 MsG0480023242.01.T01:intron 35.0%
!!! ACTTGAAGGAATTTTGGAGT+TGG + Chr4:82589594-82589613 MsG0480023244.01.T01:intron 35.0%
!!! AGGGTTTTTATAGGGGTATT+AGG + Chr4:82587552-82587571 MsG0480023244.01.T01:intron 35.0%
!!! CTTGAAGGAATTTTGGAGTT+GGG + Chr4:82589595-82589614 MsG0480023244.01.T01:intron 35.0%
AAACATTCTCATGACCTGTG+GGG + Chr4:82586139-82586158 MsG0480023242.01.T01:intron 40.0%
AAAGTTGCATACAGTACGTG+GGG - Chr4:82586345-82586364 None:intergenic 40.0%
AAATTCGACTCTTCGGATCA+AGG + Chr4:82583874-82583893 MsG0480023242.01.T01:CDS 40.0%
ACGGATCTGTTTGTGTTTGA+AGG - Chr4:82584458-82584477 None:intergenic 40.0%
AGAACTCTTGGCTGAAGATA+TGG + Chr4:82586658-82586677 MsG0480023242.01.T01:CDS 40.0%
AGAATGGAACAAAAACTCCC+CGG + Chr4:82588348-82588367 MsG0480023244.01.T01:intron 40.0%
AGAGAGACAAATTGGTGAGA+TGG - Chr4:82585083-82585102 None:intergenic 40.0%
AGATCGTCATTAGTAGGGTA+AGG - Chr4:82588780-82588799 None:intergenic 40.0%
AGATGCATTCACTCACCATA+CGG + Chr4:82586632-82586651 MsG0480023242.01.T01:CDS 40.0%
AGCAAGAAGAAGAGAAAGAG+TGG + Chr4:82587495-82587514 MsG0480023244.01.T01:intron 40.0%
ATGGTTGAAGACATATGACG+TGG + Chr4:82586677-82586696 MsG0480023242.01.T01:CDS 40.0%
CAAAACGTGGTCAAATGTGA+AGG + Chr4:82587595-82587614 MsG0480023244.01.T01:intron 40.0%
CAAAGTTGCATACAGTACGT+GGG - Chr4:82586346-82586365 None:intergenic 40.0%
CAATTGTCTTCCTTTGGATG+GGG - Chr4:82588412-82588431 None:intergenic 40.0%
CATGCTTCGCAATAGTATCT+CGG + Chr4:82586366-82586385 MsG0480023242.01.T01:intron 40.0%
CCAGAAGATCGTCATTAGTA+GGG - Chr4:82588785-82588804 None:intergenic 40.0%
CTATTTGGCATATACCGAAG+AGG - Chr4:82587328-82587347 None:intergenic 40.0%
GAAAACGTGACGAGTATGTT+TGG - Chr4:82588887-82588906 None:intergenic 40.0%
GACCTCTTAACGTTACATCA+AGG + Chr4:82589041-82589060 MsG0480023244.01.T01:intron 40.0%
GAGTGGGATGAAAAAATGTG+AGG + Chr4:82587512-82587531 MsG0480023244.01.T01:intron 40.0%
GATATGCTTGTCACACTTCT+TGG + Chr4:82584063-82584082 MsG0480023242.01.T01:intron 40.0%
GCAAGAAGAAGAGAAAGAGT+GGG + Chr4:82587496-82587515 MsG0480023244.01.T01:intron 40.0%
GGGTAATTCAACTTGCCAAA+CGG - Chr4:82588719-82588738 None:intergenic 40.0%
GGTCAGTAGAAACTTTGAGT+TGG - Chr4:82585150-82585169 None:intergenic 40.0%
GTATATGCCAAATAGCTCCT+GGG + Chr4:82587333-82587352 MsG0480023244.01.T01:intron 40.0%
GTTGAATTACCCCATTTCAG+AGG + Chr4:82588727-82588746 MsG0480023244.01.T01:intron 40.0%
GTTTAGGTAAAGGGTTTCCT+AGG - Chr4:82586496-82586515 None:intergenic 40.0%
TAACGAGTGGTTAATAAGCC+AGG + Chr4:82584651-82584670 MsG0480023242.01.T01:intron 40.0%
TAAGTCCACTCTTTCTAACC+TGG + Chr4:82584604-82584623 MsG0480023242.01.T01:intron 40.0%
TACATCATATAACAGGCGTG+TGG + Chr4:82587084-82587103 MsG0480023244.01.T01:three_prime_UTR 40.0%
TACTAATGACGATCTTCTGG+CGG + Chr4:82588785-82588804 MsG0480023244.01.T01:intron 40.0%
TATACTGTCTATACAGCCCA+TGG - Chr4:82586247-82586266 None:intergenic 40.0%
TATATGCCAAATAGCTCCTG+GGG + Chr4:82587334-82587353 MsG0480023244.01.T01:intron 40.0%
TCAAGGAATGGACCTCATTT+CGG - Chr4:82588606-82588625 None:intergenic 40.0%
TCGGTAAGTCTATGAGATGT+GGG + Chr4:82586385-82586404 MsG0480023242.01.T01:intron 40.0%
TGAATGCTTGAAAGTGGACA+CGG - Chr4:82584477-82584496 None:intergenic 40.0%
TGCCTTGATGTAACGTTAAG+AGG - Chr4:82589046-82589065 None:intergenic 40.0%
TGGAATCAGGTAGGTTTGAT+TGG + Chr4:82585493-82585512 MsG0480023242.01.T01:intron 40.0%
TGGACCTGATATGCACTATA+TGG + Chr4:82586020-82586039 MsG0480023242.01.T01:intron 40.0%
TGTAACGTTAAGAGGTCTCA+AGG - Chr4:82589038-82589057 None:intergenic 40.0%
TGTTGACATTTCACAGTCTC+TGG + Chr4:82583946-82583965 MsG0480023242.01.T01:CDS 40.0%
TTAGATAGTTCTCCAAGGGA+TGG + Chr4:82585366-82585385 MsG0480023242.01.T01:intron 40.0%
TTATTAACAGAGCCATCCCT+TGG - Chr4:82585381-82585400 None:intergenic 40.0%
! AAAGGAAAGTGCATAAGCAG+AGG - Chr4:82586071-82586090 None:intergenic 40.0%
! AGGAAAAGAGGAAGTATGTG+AGG + Chr4:82587532-82587551 MsG0480023244.01.T01:intron 40.0%
! ATGATGGTATCGAAGAGTCA+AGG - Chr4:82588298-82588317 None:intergenic 40.0%
! CATTTGTCTCACCTCTGAAA+TGG - Chr4:82588741-82588760 None:intergenic 40.0%
! CTTCACATTTGACCACGTTT+TGG - Chr4:82587597-82587616 None:intergenic 40.0%
! GGAAAAGAGGAAGTATGTGA+GGG + Chr4:82587533-82587552 MsG0480023244.01.T01:intron 40.0%
! GGGTGATTTGAGAGAGATTT+TGG + Chr4:82589615-82589634 MsG0480023244.01.T01:intron 40.0%
! GGTTAGAAAGAGTGGACTTA+TGG - Chr4:82584604-82584623 None:intergenic 40.0%
! TGTAGAACTTTGGCTTCCAA+TGG + Chr4:82586811-82586830 MsG0480023244.01.T01:exon 40.0%
!! CGTTTTTGATTCTGAGCAAG+AGG - Chr4:82585821-82585840 None:intergenic 40.0%
!! CTTTTCTTTGTTGTGTGGAC+AGG - Chr4:82584514-82584533 None:intergenic 40.0%
!! GAATGGAACAAAAGCACTTC+TGG - Chr4:82588206-82588225 None:intergenic 40.0%
!! GCAAGTTAACTTGCGTAAGT+TGG - Chr4:82587694-82587713 None:intergenic 40.0%
!! TGTTTGGCTGGTTTAGATGA+AGG - Chr4:82588638-82588657 None:intergenic 40.0%
!! TTCTGAAGTATTGGCAGACT+TGG + Chr4:82585781-82585800 MsG0480023242.01.T01:CDS 40.0%
!! TTTGTCTCACCTCTGAAATG+GGG - Chr4:82588739-82588758 None:intergenic 40.0%
!!! GTATTTTTGGTAGGCTTGCA+GGG + Chr4:82589795-82589814 MsG0480023244.01.T01:intron 40.0%
!!! TACTTGCGCAAGGGTATTTT+TGG + Chr4:82589782-82589801 MsG0480023244.01.T01:intron 40.0%
!!! TGTGCCTCAGTTTTTAGAAC+CGG + Chr4:82587668-82587687 MsG0480023244.01.T01:intron 40.0%
!!! TTTTTTCCCCAGGAGCTATT+TGG - Chr4:82587343-82587362 None:intergenic 40.0%
AAAAAAGTGATCAGCCCTGG+GGG + Chr4:82587357-82587376 MsG0480023244.01.T01:intron 45.0%
AAACTCTACATCAGACGCAC+TGG - Chr4:82585246-82585265 None:intergenic 45.0%
AACCTCAGAGGTTGAAGGTT+CGG - Chr4:82589069-82589088 None:intergenic 45.0%
AACGTTCCAAATTTCCCCAC+AGG - Chr4:82586156-82586175 None:intergenic 45.0%
AACTTCGCCATCTCATCAGT+TGG - Chr4:82584677-82584696 None:intergenic 45.0%
ACACCGATGAGCCAGAATTT+AGG - Chr4:82584290-82584309 None:intergenic 45.0%
ACCATACGGACAAGAACTCT+TGG + Chr4:82586646-82586665 MsG0480023242.01.T01:CDS 45.0%
ACTACGACATGGAATCAGGT+AGG + Chr4:82585484-82585503 MsG0480023242.01.T01:intron 45.0%
ACTGAGGCACAAACGTTTCT+TGG - Chr4:82587659-82587678 None:intergenic 45.0%
AGACGGCAGAATTCACAGAA+TGG - Chr4:82585590-82585609 None:intergenic 45.0%
AGCCACTGGTATACCTAAAG+CGG + Chr4:82587434-82587453 MsG0480023244.01.T01:intron 45.0%
AGGCACAAACGTTTCTTGGA+CGG - Chr4:82587655-82587674 None:intergenic 45.0%
AGTTCCAGTGGATCGATATG+CGG - Chr4:82588854-82588873 None:intergenic 45.0%
ATAACTCTCCAGTATCTCCC+GGG - Chr4:82586728-82586747 None:intergenic 45.0%
ATACAGCATCCTGGAGTTGT+TGG - Chr4:82584814-82584833 None:intergenic 45.0%
ATACCGCACTTAGTGGGATA+AGG + Chr4:82586192-82586211 MsG0480023242.01.T01:intron 45.0%
ATCTAAGTGCCAACCGAATG+AGG + Chr4:82588266-82588285 MsG0480023244.01.T01:intron 45.0%
ATGACGTGGAACTTTGTTGC+TGG + Chr4:82586691-82586710 MsG0480023242.01.T01:CDS 45.0%
ATTCAACTTGCCAAACGGAG+AGG - Chr4:82588714-82588733 None:intergenic 45.0%
CATAACTCTCCAGTATCTCC+CGG - Chr4:82586729-82586748 None:intergenic 45.0%
CATATCGATCCACTGGAACT+TGG + Chr4:82588854-82588873 MsG0480023244.01.T01:intron 45.0%
CATTTCACAGTCTCTGGCTA+TGG + Chr4:82583952-82583971 MsG0480023242.01.T01:CDS 45.0%
CCACACAACAAAGAAAAGCG+AGG + Chr4:82584516-82584535 MsG0480023242.01.T01:CDS 45.0%
CCCTACTAATGACGATCTTC+TGG + Chr4:82588782-82588801 MsG0480023244.01.T01:intron 45.0%
CCTTTCCTCCAACATGTGTT+CGG - Chr4:82585942-82585961 None:intergenic 45.0%
CGACGTTCATGCAGAATCAA+CGG - Chr4:82589097-82589116 None:intergenic 45.0%
CGGTAAGTCTATGAGATGTG+GGG + Chr4:82586386-82586405 MsG0480023242.01.T01:intron 45.0%
CGGTAGTCAATGGTCTTCAA+TGG - Chr4:82587635-82587654 None:intergenic 45.0%
CTAGTTAAATGGCAGGACAC+CGG - Chr4:82588380-82588399 None:intergenic 45.0%
CTCGGTAAGTCTATGAGATG+TGG + Chr4:82586384-82586403 MsG0480023242.01.T01:intron 45.0%
CTCTGGCTATGGCATATGTA+TGG + Chr4:82583963-82583982 MsG0480023242.01.T01:intron 45.0%
GAAAAAAGTGATCAGCCCTG+GGG + Chr4:82587356-82587375 MsG0480023244.01.T01:intron 45.0%
GAACGTTTAATTCCATGGGC+TGG + Chr4:82586169-82586188 MsG0480023242.01.T01:intron 45.0%
GCAAAGTTGCATACAGTACG+TGG - Chr4:82586347-82586366 None:intergenic 45.0%
GCAGCAAGGAAATGTTTGGA+AGG - Chr4:82586441-82586460 None:intergenic 45.0%
GCCAGAAGATCGTCATTAGT+AGG - Chr4:82588786-82588805 None:intergenic 45.0%
GCTATGGCATATGTATGGTC+AGG + Chr4:82583968-82583987 MsG0480023242.01.T01:intron 45.0%
GCTGCGTGCTTTCTTAAACA+AGG - Chr4:82589686-82589705 None:intergenic 45.0%
GCTTTACTCCGAACACATGT+TGG + Chr4:82585931-82585950 MsG0480023242.01.T01:intron 45.0%
GGAAAAAAGTGATCAGCCCT+GGG + Chr4:82587355-82587374 MsG0480023244.01.T01:intron 45.0%
GGCTTTCAGCAACCTTATGA+AGG + Chr4:82585907-82585926 MsG0480023242.01.T01:CDS 45.0%
GGTATATGCCAAATAGCTCC+TGG + Chr4:82587332-82587351 MsG0480023244.01.T01:intron 45.0%
GTGAAGTTGCACATACCAAC+CGG - Chr4:82583905-82583924 None:intergenic 45.0%
GTTTCTTGGACGGTAGTCAA+TGG - Chr4:82587645-82587664 None:intergenic 45.0%
GTTTGAATGACCCCATCCAA+AGG + Chr4:82588399-82588418 MsG0480023244.01.T01:intron 45.0%
TACCTGATTCCATGTCGTAG+TGG - Chr4:82585485-82585504 None:intergenic 45.0%
TAGACGGTTTCTCAACTCTC+AGG - Chr4:82586921-82586940 None:intergenic 45.0%
TAGGGTGGTTATACCGCTTT+AGG - Chr4:82587450-82587469 None:intergenic 45.0%
TAGGTATACCAGTGGCTTCT+GGG - Chr4:82587431-82587450 None:intergenic 45.0%
TCATAAGGTTGCTGAAAGCC+TGG - Chr4:82585907-82585926 None:intergenic 45.0%
TCATGACCTGTGGGGAAATT+TGG + Chr4:82586147-82586166 MsG0480023242.01.T01:intron 45.0%
TCTTCTACAGCAGCTAGCAA+AGG - Chr4:82585872-82585891 None:intergenic 45.0%
TGACGTGGAACTTTGTTGCT+GGG + Chr4:82586692-82586711 MsG0480023242.01.T01:CDS 45.0%
TGATGTTCTCCAACAACTCC+AGG + Chr4:82584802-82584821 MsG0480023242.01.T01:CDS 45.0%
TGGGAACTCGTGTAGAACTT+TGG + Chr4:82586801-82586820 MsG0480023244.01.T01:exon 45.0%
TTACTCCGAACACATGTTGG+AGG + Chr4:82585934-82585953 MsG0480023242.01.T01:intron 45.0%
TTAGGTATACCAGTGGCTTC+TGG - Chr4:82587432-82587451 None:intergenic 45.0%
! AAGCCTTATCCCACTAAGTG+CGG - Chr4:82586198-82586217 None:intergenic 45.0%
! AGATTTGAAACAATGGCGGG+TGG - Chr4:82589122-82589141 None:intergenic 45.0%
! CAAGATGCCCTTTTCCAGAT+CGG + Chr4:82587389-82587408 MsG0480023244.01.T01:intron 45.0%
! CGGAGTAAAGCACCTTCATA+AGG - Chr4:82585922-82585941 None:intergenic 45.0%
! GAGTGGACTTATGGCAGATA+TGG - Chr4:82584595-82584614 None:intergenic 45.0%
! TACCGCTTTAGGTATACCAG+TGG - Chr4:82587439-82587458 None:intergenic 45.0%
!! ACGTGACTTAACTTGCGCAA+GGG - Chr4:82587173-82587192 None:intergenic 45.0%
!! CCTCGCTTTTCTTTGTTGTG+TGG - Chr4:82584519-82584538 None:intergenic 45.0%
!! GAAGGGGCATCTCTATATCT+GGG - Chr4:82585445-82585464 None:intergenic 45.0%
!! GGACCTAAATTCTGGCTCAT+CGG + Chr4:82584284-82584303 MsG0480023242.01.T01:intron 45.0%
!! GTTAACTTGCGTAAGTTGGC+CGG - Chr4:82587690-82587709 None:intergenic 45.0%
!! TACGTGACTTAACTTGCGCA+AGG - Chr4:82587174-82587193 None:intergenic 45.0%
!! TTGGCCGGTTCTAAAAACTG+AGG - Chr4:82587675-82587694 None:intergenic 45.0%
!!! AACTTGCGCAAGGGCATTTT+TGG - Chr4:82587164-82587183 None:intergenic 45.0%
!!! GCATTTTTGGTACGCTTGCA+GGG - Chr4:82587151-82587170 None:intergenic 45.0%
!!! GGTATTTTTGGTAGGCTTGC+AGG + Chr4:82589794-82589813 MsG0480023244.01.T01:intron 45.0%
!!! TGCGCAAGGGTATTTTTGGT+AGG + Chr4:82589786-82589805 MsG0480023244.01.T01:intron 45.0%
AAAGATGCTCCACTTGGAGC+TGG + Chr4:82586781-82586800 MsG0480023242.01.T01:CDS 50.0%
AAGATGCTCCACTTGGAGCT+GGG + Chr4:82586782-82586801 MsG0480023242.01.T01:CDS 50.0%
AAGCACTTCTGGACGAATGC+TGG - Chr4:82588195-82588214 None:intergenic 50.0%
AGCGAGAGCTAAAGGTGGAA+GGG - Chr4:82585462-82585481 None:intergenic 50.0%
AGGAATGGACCTCATTTCGG+TGG - Chr4:82588603-82588622 None:intergenic 50.0%
AGGTATACCAGTGGCTTCTG+GGG - Chr4:82587430-82587449 None:intergenic 50.0%
ATGCTTGAGTCCTCTCCGTT+TGG + Chr4:82588701-82588720 MsG0480023244.01.T01:intron 50.0%
ATTCCAGTGCCACCGAAATG+AGG + Chr4:82588591-82588610 MsG0480023244.01.T01:intron 50.0%
CCGAACACATGTTGGAGGAA+AGG + Chr4:82585939-82585958 MsG0480023242.01.T01:intron 50.0%
CGGGAGATACTGGAGAGTTA+TGG + Chr4:82586727-82586746 MsG0480023242.01.T01:CDS 50.0%
CGTTCATGCAGAATCAACGG+CGG - Chr4:82589094-82589113 None:intergenic 50.0%
CTCCACTACGACATGGAATC+AGG + Chr4:82585480-82585499 MsG0480023242.01.T01:CDS 50.0%
GCACTTAGTGGGATAAGGCT+TGG + Chr4:82586197-82586216 MsG0480023242.01.T01:intron 50.0%
GCAGCAGCACTAAGAGAAAG+TGG - Chr4:82585423-82585442 None:intergenic 50.0%
GCCAAGAGTTCTTGTCCGTA+TGG - Chr4:82586650-82586669 None:intergenic 50.0%
GGGAAAAAAGTGATCAGCCC+TGG + Chr4:82587354-82587373 MsG0480023244.01.T01:intron 50.0%
GTCAAGGTCTGGACCTCATT+CGG - Chr4:82588282-82588301 None:intergenic 50.0%
GTGTGGACAGGATTTACCCA+AGG - Chr4:82584502-82584521 None:intergenic 50.0%
GTTGAGGATATCTTGGCGCT+AGG + Chr4:82584767-82584786 MsG0480023242.01.T01:CDS 50.0%
TCATCCGCATATCGATCCAC+TGG + Chr4:82588847-82588866 MsG0480023244.01.T01:intron 50.0%
TCGTGCGCATTATATCACCC+CGG + Chr4:82586755-82586774 MsG0480023242.01.T01:CDS 50.0%
TCTTCGGATCAAGGATGAGC+CGG + Chr4:82583883-82583902 MsG0480023242.01.T01:CDS 50.0%
TGCGCAAGTTACTTGCGCAA+GGG + Chr4:82589773-82589792 MsG0480023244.01.T01:intron 50.0%
TTGCGCAAGTTACTTGCGCA+AGG + Chr4:82589772-82589791 MsG0480023244.01.T01:intron 50.0%
! AAGTGGAGCATCTTTGGTCC+GGG - Chr4:82586776-82586795 None:intergenic 50.0%
! AGCTCCAAGTGGAGCATCTT+TGG - Chr4:82586782-82586801 None:intergenic 50.0%
! ATCTTGATGTCGTTTCCCCC+AGG - Chr4:82587375-82587394 None:intergenic 50.0%
! CAAGTGGAGCATCTTTGGTC+CGG - Chr4:82586777-82586796 None:intergenic 50.0%
! GGTATCGAAGAGTCAAGGTC+TGG - Chr4:82588293-82588312 None:intergenic 50.0%
! GTGGGATAAGGCTTGGTTGT+TGG + Chr4:82586204-82586223 MsG0480023242.01.T01:intron 50.0%
! TCTTGATGTCGTTTCCCCCA+GGG - Chr4:82587374-82587393 None:intergenic 50.0%
!! AGGGGAGGGTATCATTCACT+TGG - Chr4:82588928-82588947 None:intergenic 50.0%
!! GAGGGTATCATTCACTTGGG+TGG - Chr4:82588924-82588943 None:intergenic 50.0%
!! GGAAGGGGCATCTCTATATC+TGG - Chr4:82585446-82585465 None:intergenic 50.0%
!! GGGGAGGGTATCATTCACTT+GGG - Chr4:82588927-82588946 None:intergenic 50.0%
!! TGTCTCTGGGGTTGACTCTT+TGG + Chr4:82588993-82589012 MsG0480023244.01.T01:intron 50.0%
!!! GGCATTTTTGGTACGCTTGC+AGG - Chr4:82587152-82587171 None:intergenic 50.0%
!!! GGCTGATCACTTTTTTCCCC+AGG - Chr4:82587353-82587372 None:intergenic 50.0%
AAAAACTCCCCGGACGATGC+CGG + Chr4:82588358-82588377 MsG0480023244.01.T01:intron 55.0%
AAGTAGTGGTCGGTCCGATC+TGG - Chr4:82587406-82587425 None:intergenic 55.0%
AGCCAGGCCAACTGATGAGA+TGG + Chr4:82584667-82584686 MsG0480023242.01.T01:intron 55.0%
AGGGTGCGAGCAAAACGTGT+TGG + Chr4:82589814-82589833 MsG0480023244.01.T01:intron 55.0%
AGGGTGCGAGCAAATAGTGC+TGG - Chr4:82587132-82587151 None:intergenic 55.0%
AGGTCTGGACCTCATTCGGT+TGG - Chr4:82588278-82588297 None:intergenic 55.0%
AGTGGAGCGAGAGCTAAAGG+TGG - Chr4:82585467-82585486 None:intergenic 55.0%
CAACCCCAGAGACACAAGGA+GGG - Chr4:82588987-82589006 None:intergenic 55.0%
CAAGGAGGGTGGAACACGTT+CGG - Chr4:82588973-82588992 None:intergenic 55.0%
CACCGAACCTTCAACCTCTG+AGG + Chr4:82589064-82589083 MsG0480023244.01.T01:intron 55.0%
CGGACCAAAGATGCTCCACT+TGG + Chr4:82586775-82586794 MsG0480023242.01.T01:CDS 55.0%
CGGAGAACCTCAGAGGTTGA+AGG - Chr4:82589074-82589093 None:intergenic 55.0%
GACTATTGCCCGGGAGATAC+TGG + Chr4:82586717-82586736 MsG0480023242.01.T01:CDS 55.0%
GAGCGAGAGCTAAAGGTGGA+AGG - Chr4:82585463-82585482 None:intergenic 55.0%
GAGTCAACCCCAGAGACACA+AGG - Chr4:82588991-82589010 None:intergenic 55.0%
GCGAGAGCTAAAGGTGGAAG+GGG - Chr4:82585461-82585480 None:intergenic 55.0%
GGCTGGATACCGCACTTAGT+GGG + Chr4:82586186-82586205 MsG0480023242.01.T01:intron 55.0%
GGGTGCGAGCAAAACGTGTT+GGG + Chr4:82589815-82589834 MsG0480023244.01.T01:intron 55.0%
GGGTGCGAGCAAATAGTGCT+GGG - Chr4:82587131-82587150 None:intergenic 55.0%
GGTATACCAGTGGCTTCTGG+GGG - Chr4:82587429-82587448 None:intergenic 55.0%
GGTCGGTCCGATCTGGAAAA+GGG - Chr4:82587399-82587418 None:intergenic 55.0%
GTGTCTACTTCTGCACCAGC+TGG + Chr4:82585970-82585989 MsG0480023242.01.T01:intron 55.0%
TAAGTGCGGTATCCAGCCCA+TGG - Chr4:82586184-82586203 None:intergenic 55.0%
TCAACCCCAGAGACACAAGG+AGG - Chr4:82588988-82589007 None:intergenic 55.0%
TCCACCCTCCTTGTGTCTCT+GGG + Chr4:82588980-82588999 MsG0480023244.01.T01:intron 55.0%
TCTACTTCTGCACCAGCTGG+TGG + Chr4:82585973-82585992 MsG0480023242.01.T01:intron 55.0%
TGCGAGCAAAACGTGTTGGG+TGG + Chr4:82589818-82589837 MsG0480023244.01.T01:intron 55.0%
TGGTCGGTCCGATCTGGAAA+AGG - Chr4:82587400-82587419 None:intergenic 55.0%
TTCCACCCTCCTTGTGTCTC+TGG + Chr4:82588979-82588998 MsG0480023244.01.T01:intron 55.0%
TTGCTGGGCTGACTATTGCC+CGG + Chr4:82586707-82586726 MsG0480023242.01.T01:CDS 55.0%
! AACTCTCAGGTGCTGTGAGG+CGG - Chr4:82586908-82586927 None:intergenic 55.0%
! AGTGGAGCATCTTTGGTCCG+GGG - Chr4:82586775-82586794 None:intergenic 55.0%
! CGTAGTGGAGCGAGAGCTAA+AGG - Chr4:82585470-82585489 None:intergenic 55.0%
! CTCAACTCTCAGGTGCTGTG+AGG - Chr4:82586911-82586930 None:intergenic 55.0%
! CTTCTGGGGGAAGTAGTGGT+CGG - Chr4:82587416-82587435 None:intergenic 55.0%
! TGCGAGCAAATAGTGCTGGG+TGG - Chr4:82587128-82587147 None:intergenic 55.0%
AAACGTCCGACGCTCGACGA+GGG - Chr4:82588947-82588966 None:intergenic 60.0%
AGAAGAACCTGCTCTGCGCC+AGG + Chr4:82585886-82585905 MsG0480023242.01.T01:CDS 60.0%
CACGAGTTCCCAGCTCCAAG+TGG - Chr4:82586793-82586812 None:intergenic 60.0%
CCACCCTCCTTGTGTCTCTG+GGG + Chr4:82588981-82589000 MsG0480023244.01.T01:intron 60.0%
CGCCATCTCATCAGTTGGCC+TGG - Chr4:82584672-82584691 None:intergenic 60.0%
CGGATCAAGGATGAGCCGGT+TGG + Chr4:82583887-82583906 MsG0480023242.01.T01:CDS 60.0%
CTACTTCCCCCAGAAGCCAC+TGG + Chr4:82587420-82587439 MsG0480023244.01.T01:intron 60.0%
GCTCTCGCTCCACTACGACA+TGG + Chr4:82585473-82585492 MsG0480023242.01.T01:CDS 60.0%
GGACCTCATTTCGGTGGCAC+TGG - Chr4:82588597-82588616 None:intergenic 60.0%
GGGCTGGATACCGCACTTAG+TGG + Chr4:82586185-82586204 MsG0480023242.01.T01:intron 60.0%
TAAACGTCCGACGCTCGACG+AGG - Chr4:82588948-82588967 None:intergenic 60.0%
TCAACGGCGGAGAACCTCAG+AGG - Chr4:82589081-82589100 None:intergenic 60.0%
TGCTGGGCTGACTATTGCCC+GGG + Chr4:82586708-82586727 MsG0480023242.01.T01:CDS 60.0%
! GGGAGCACACCAAGTTCCAG+TGG - Chr4:82588866-82588885 None:intergenic 60.0%
! GTGGCTTCTGGGGGAAGTAG+TGG - Chr4:82587420-82587439 None:intergenic 60.0%
AACGTCCGACGCTCGACGAG+GGG - Chr4:82588946-82588965 None:intergenic 65.0%
CCCCAGAGACACAAGGAGGG+TGG - Chr4:82588984-82589003 None:intergenic 65.0%
CTGAAAGCCTGGCGCAGAGC+AGG - Chr4:82585896-82585915 None:intergenic 65.0%
!! AGTACGAGGGTGCCACCAGC+TGG - Chr4:82585988-82586007 None:intergenic 65.0%
ACCCTCCCCTCGTCGAGCGT+CGG + Chr4:82588938-82588957 MsG0480023244.01.T01:intron 70.0%
CAGGACACCGGCATCGTCCG+GGG - Chr4:82588368-82588387 None:intergenic 70.0%
GCAGGACACCGGCATCGTCC+GGG - Chr4:82588369-82588388 None:intergenic 70.0%
GGCAGGACACCGGCATCGTC+CGG - Chr4:82588370-82588389 None:intergenic 70.0%
TCCGACGCTCGACGAGGGGA+GGG - Chr4:82588942-82588961 None:intergenic 70.0%
GTCCGACGCTCGACGAGGGG+AGG - Chr4:82588943-82588962 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr4 gene 82583869 82589884 82583869 ID=MsG0480023244.01;Name=MsG0480023244.01
Chr4 mRNA 82583869 82589884 82583869 ID=MsG0480023244.01.T01;Parent=MsG0480023244.01;Name=MsG0480023244.01.T01;_AED=0.49;_eAED=0.49;_QI=0|0.66|0.85|1|0.33|0.14|7|303|171
Chr4 exon 82583869 82583989 82583869 ID=MsG0480023244.01.T01:exon:910;Parent=MsG0480023244.01.T01
Chr4 exon 82585765 82585971 82585765 ID=MsG0480023244.01.T01:exon:911;Parent=MsG0480023244.01.T01
Chr4 exon 82586628 82587018 82586628 ID=MsG0480023244.01.T01:exon:912;Parent=MsG0480023244.01.T01
Chr4 exon 82587039 82587113 82587039 ID=MsG0480023244.01.T01:exon:913;Parent=MsG0480023244.01.T01
Chr4 exon 82589860 82589884 82589860 ID=MsG0480023244.01.T01:exon:914;Parent=MsG0480023244.01.T01
Chr4 CDS 82583869 82583989 82583869 ID=MsG0480023244.01.T01:cds;Parent=MsG0480023244.01.T01
Chr4 CDS 82585765 82585971 82585765 ID=MsG0480023244.01.T01:cds;Parent=MsG0480023244.01.T01
Chr4 CDS 82586628 82586815 82586628 ID=MsG0480023244.01.T01:cds;Parent=MsG0480023244.01.T01
Chr4 three_prime_UTR 82586816 82587018 82586816 ID=MsG0480023244.01.T01:three_prime_utr;Parent=MsG0480023244.01.T01
Chr4 three_prime_UTR 82587039 82587113 82587039 ID=MsG0480023244.01.T01:three_prime_utr;Parent=MsG0480023244.01.T01
Chr4 three_prime_UTR 82589860 82589884 82589860 ID=MsG0480023244.01.T01:three_prime_utr;Parent=MsG0480023244.01.T01
Gene Sequence

>MsG0480023244.01.T01

ATGGGAAATTCGACTCTTCGGATCAAGGATGAGCCGGTTGGTATGTGCAACTTCACTGCCGATCAAAGATCAAATGCTGTTGACATTTCACAGTCTCTGGCTATGGCATATGTATGGTCAGGAAGACCATGCAATGTTTCTGAAGTATTGGCAGACTTGGTTGATACAATCAAACCTCTTGCTCAGAATCAAAAACGTGTAATAGAACATAGTCAGTTCTCATCACCTTTGCTAGCTGCTGTAGAAGAACCTGCTCTGCGCCAGGCTTTCAGCAACCTTATGAAGGTGCTTTACTCCGAACACATGTTGGAGGAAAGGTTACAATTGTACGCAGATGCATTCACTCACCATACGGACAAGAACTCTTGGCTGAAGATATGGTTGAAGACATATGACGTGGAACTTTGTTGCTGGGCTGACTATTGCCCGGGAGATACTGGAGAGTTATGGCTGTGTCGTGCGCATTATATCACCCCGGACCAAAGATGCTCCACTTGGAGCTGGGAACTCGTGTAG

Protein sequence

>MsG0480023244.01.T01

MGNSTLRIKDEPVGMCNFTADQRSNAVDISQSLAMAYVWSGRPCNVSEVLADLVDTIKPLAQNQKRVIEHSQFSSPLLAAVEEPALRQAFSNLMKVLYSEHMLEERLQLYADAFTHHTDKNSWLKIWLKTYDVELCCWADYCPGDTGELWLCRAHYITPDQRCSTWSWELV*