Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017804.01.T02 | XP_024633879.1 | 94.118 | 68 | 4 | 0 | 1 | 68 | 1 | 68 | 9.06E-35 | 130 |
| MsG0380017804.01.T01 | XP_024633877.1 | 97.03 | 202 | 6 | 0 | 1 | 202 | 119 | 320 | 5.97E-141 | 407 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017804.01.T01 | P74038 | 43.077 | 195 | 111 | 0 | 1 | 195 | 53 | 247 | 2.64E-50 | 167 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017804.01.T01 | A0A072VDF7 | 97.030 | 202 | 6 | 0 | 1 | 202 | 119 | 320 | 2.85e-141 | 407 |
| MsG0380017804.01.T02 | A0A072VDF7 | 94.118 | 68 | 4 | 0 | 1 | 68 | 1 | 68 | 1.20e-34 | 130 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047967.01 | MsG0380017804.01 | 0.803792 | 2.944050e-49 | 1.492982e-46 |
| MsG0080048694.01 | MsG0380017804.01 | 0.807387 | 5.181827e-50 | 2.882421e-47 |
| MsG0080048695.01 | MsG0380017804.01 | 0.807009 | 6.230377e-50 | 3.431744e-47 |
| MsG0080048800.01 | MsG0380017804.01 | 0.812388 | 4.348553e-51 | 2.761178e-48 |
| MsG0080048889.01 | MsG0380017804.01 | -0.843942 | 1.027274e-58 | 1.633036e-55 |
| MsG0080048919.01 | MsG0380017804.01 | 0.832152 | 1.112547e-55 | 1.232945e-52 |
| MsG0080048948.01 | MsG0380017804.01 | 0.825968 | 3.508997e-54 | 3.247204e-51 |
| MsG0080048986.01 | MsG0380017804.01 | 0.825898 | 3.646994e-54 | 3.368198e-51 |
| MsG0080049019.01 | MsG0380017804.01 | 0.820760 | 5.783943e-53 | 4.617685e-50 |
| MsG0080049023.01 | MsG0380017804.01 | 0.816249 | 6.095422e-52 | 4.296931e-49 |
| MsG0080049066.01 | MsG0380017804.01 | 0.834170 | 3.499407e-56 | 4.119005e-53 |
| MsG0080049076.01 | MsG0380017804.01 | 0.817251 | 3.634058e-52 | 2.632896e-49 |
| MsG0080049133.01 | MsG0380017804.01 | 0.834616 | 2.704468e-56 | 3.226550e-53 |
| MsG0180000337.01 | MsG0380017804.01 | -0.808869 | 2.505055e-50 | 1.448579e-47 |
| MsG0180000719.01 | MsG0380017804.01 | 0.827224 | 1.760624e-54 | 1.689118e-51 |
| MsG0180001614.01 | MsG0380017804.01 | 0.802517 | 5.403274e-49 | 2.652030e-46 |
| MsG0180001925.01 | MsG0380017804.01 | 0.861650 | 8.839076e-64 | 2.518577e-60 |
| MsG0180002099.01 | MsG0380017804.01 | 0.842170 | 3.045290e-58 | 4.578120e-55 |
| MsG0180002214.01 | MsG0380017804.01 | 0.854442 | 1.227566e-61 | 2.741747e-58 |
| MsG0180002425.01 | MsG0380017804.01 | 0.824388 | 8.294822e-54 | 7.336206e-51 |
| MsG0180002426.01 | MsG0380017804.01 | 0.860214 | 2.414626e-63 | 6.550133e-60 |
| MsG0180002546.01 | MsG0380017804.01 | 0.833975 | 3.916436e-56 | 4.584061e-53 |
| MsG0180003324.01 | MsG0380017804.01 | 0.809909 | 1.498825e-50 | 8.910423e-48 |
| MsG0180003757.01 | MsG0380017804.01 | 0.810025 | 1.415156e-50 | 8.438921e-48 |
| MsG0180004124.01 | MsG0380017804.01 | 0.823573 | 1.288144e-53 | 1.113347e-50 |
| MsG0180004125.01 | MsG0380017804.01 | 0.821519 | 3.868211e-53 | 3.153980e-50 |
| MsG0180004301.01 | MsG0380017804.01 | 0.806187 | 9.291340e-50 | 5.011093e-47 |
| MsG0180004586.01 | MsG0380017804.01 | 0.806602 | 7.595670e-50 | 4.139988e-47 |
| MsG0180004731.01 | MsG0380017804.01 | 0.828764 | 7.499351e-55 | 7.524337e-52 |
| MsG0180004737.01 | MsG0380017804.01 | 0.826799 | 2.224218e-54 | 2.107494e-51 |
| MsG0180004761.01 | MsG0380017804.01 | 0.843446 | 1.394552e-58 | 2.182492e-55 |
| MsG0180004787.01 | MsG0380017804.01 | 0.818991 | 1.468232e-52 | 1.116065e-49 |
| MsG0180005369.01 | MsG0380017804.01 | 0.829097 | 6.229042e-55 | 6.311564e-52 |
| MsG0180005791.01 | MsG0380017804.01 | 0.800811 | 1.209818e-48 | 5.686559e-46 |
| MsG0180005817.01 | MsG0380017804.01 | 0.853576 | 2.181849e-61 | 4.736329e-58 |
| MsG0180005847.01 | MsG0380017804.01 | 0.810269 | 1.253556e-50 | 7.522608e-48 |
| MsG0180005848.01 | MsG0380017804.01 | 0.808908 | 2.458160e-50 | 1.422876e-47 |
| MsG0180006212.01 | MsG0380017804.01 | 0.829213 | 5.838789e-55 | 5.936944e-52 |
| MsG0180006227.01 | MsG0380017804.01 | 0.835044 | 2.109992e-56 | 2.549755e-53 |
| MsG0280006381.01 | MsG0380017804.01 | 0.828559 | 8.405406e-55 | 8.384163e-52 |
| MsG0280010695.01 | MsG0380017804.01 | 0.817958 | 2.516955e-52 | 1.859244e-49 |
| MsG0280011299.01 | MsG0380017804.01 | 0.841321 | 5.100890e-58 | 7.466964e-55 |
| MsG0280011403.01 | MsG0380017804.01 | -0.834064 | 3.718686e-56 | 4.363752e-53 |
| MsG0280011475.01 | MsG0380017804.01 | 0.804144 | 2.486788e-49 | 1.272558e-46 |
| MsG0380012148.01 | MsG0380017804.01 | 0.809704 | 1.659234e-50 | 9.810911e-48 |
| MsG0380012281.01 | MsG0380017804.01 | 0.832306 | 1.019295e-55 | 1.134643e-52 |
| MsG0380013063.01 | MsG0380017804.01 | 0.803668 | 3.122965e-49 | 1.578620e-46 |
| MsG0380013114.01 | MsG0380017804.01 | 0.801667 | 8.081317e-49 | 3.881648e-46 |
| MsG0380013473.01 | MsG0380017804.01 | 0.813874 | 2.052470e-51 | 1.356289e-48 |
| MsG0380013928.01 | MsG0380017804.01 | 0.806394 | 8.404422e-50 | 4.556393e-47 |
| MsG0380013940.01 | MsG0380017804.01 | 0.804603 | 1.995556e-49 | 1.033302e-46 |
| MsG0380013943.01 | MsG0380017804.01 | 0.812985 | 3.217516e-51 | 2.075460e-48 |
| MsG0380013945.01 | MsG0380017804.01 | 0.806569 | 7.719368e-50 | 4.203864e-47 |
| MsG0380013956.01 | MsG0380017804.01 | 0.806609 | 7.569643e-50 | 4.126467e-47 |
| MsG0380013971.01 | MsG0380017804.01 | 0.814054 | 1.873110e-51 | 1.243782e-48 |
| MsG0380013977.01 | MsG0380017804.01 | 0.803351 | 3.633864e-49 | 1.821915e-46 |
| MsG0380014005.01 | MsG0380017804.01 | 0.801932 | 7.128563e-49 | 3.447180e-46 |
| MsG0380014029.01 | MsG0380017804.01 | 0.802562 | 5.288214e-49 | 2.598562e-46 |
| MsG0380014032.01 | MsG0380017804.01 | 0.804566 | 2.031124e-49 | 1.050709e-46 |
| MsG0380014642.01 | MsG0380017804.01 | 0.815314 | 9.852285e-52 | 6.769475e-49 |
| MsG0380014735.01 | MsG0380017804.01 | 0.836922 | 7.043628e-57 | 9.006385e-54 |
| MsG0380015201.01 | MsG0380017804.01 | 0.810466 | 1.136872e-50 | 6.858017e-48 |
| MsG0380015271.01 | MsG0380017804.01 | 0.804159 | 2.468844e-49 | 1.263867e-46 |
| MsG0380015539.01 | MsG0380017804.01 | -0.816966 | 4.211388e-52 | 3.027793e-49 |
| MsG0380015654.01 | MsG0380017804.01 | 0.823575 | 1.286397e-53 | 1.111925e-50 |
| MsG0380015752.01 | MsG0380017804.01 | 0.818769 | 1.648778e-52 | 1.245524e-49 |
| MsG0380015985.01 | MsG0380017804.01 | 0.802291 | 6.015993e-49 | 2.935982e-46 |
| MsG0380016089.01 | MsG0380017804.01 | 0.833143 | 6.315188e-56 | 7.209335e-53 |
| MsG0380016096.01 | MsG0380017804.01 | 0.813047 | 3.118229e-51 | 2.014777e-48 |
| MsG0380016476.01 | MsG0380017804.01 | -0.826824 | 2.193976e-54 | 2.080375e-51 |
| MsG0380016835.01 | MsG0380017804.01 | 0.804297 | 2.311234e-49 | 1.187376e-46 |
| MsG0380016889.01 | MsG0380017804.01 | 0.819942 | 8.911364e-53 | 6.954780e-50 |
| MsG0380016931.01 | MsG0380017804.01 | 0.806433 | 8.246617e-50 | 4.475373e-47 |
| MsG0380016934.01 | MsG0380017804.01 | 0.815133 | 1.080566e-51 | 7.387426e-49 |
| MsG0380016935.01 | MsG0380017804.01 | 0.827506 | 1.506746e-54 | 1.457482e-51 |
| MsG0380017135.01 | MsG0380017804.01 | 0.830025 | 3.704520e-55 | 3.856561e-52 |
| MsG0380017231.01 | MsG0380017804.01 | -0.832768 | 7.829188e-56 | 8.837306e-53 |
| MsG0380017405.01 | MsG0380017804.01 | 0.833405 | 5.433973e-56 | 6.251801e-53 |
| MsG0380017406.01 | MsG0380017804.01 | 0.821908 | 3.144194e-53 | 2.592201e-50 |
| MsG0380017804.01 | MsG0380017812.01 | 0.810874 | 9.279405e-51 | 5.659133e-48 |
| MsG0380017804.01 | MsG0380017928.01 | 0.835130 | 2.007630e-56 | 2.432197e-53 |
| MsG0380017804.01 | MsG0380017935.01 | 0.819486 | 1.132601e-52 | 8.727598e-50 |
| MsG0380017804.01 | MsG0480018112.01 | 0.820349 | 7.190866e-53 | 5.675687e-50 |
| MsG0380017804.01 | MsG0480018201.01 | 0.808030 | 3.783922e-50 | 2.140382e-47 |
| MsG0380017804.01 | MsG0480018333.01 | -0.818879 | 1.556944e-52 | 1.179735e-49 |
| MsG0380017804.01 | MsG0480018463.01 | 0.847018 | 1.508156e-59 | 2.644473e-56 |
| MsG0380017804.01 | MsG0480019017.01 | -0.805110 | 1.563379e-49 | 8.201694e-47 |
| MsG0380017804.01 | MsG0480019038.01 | -0.801070 | 1.070728e-48 | 5.066425e-46 |
| MsG0380017804.01 | MsG0480019183.01 | 0.838931 | 2.145197e-57 | 2.916704e-54 |
| MsG0380017804.01 | MsG0480019836.01 | 0.869233 | 3.609534e-66 | 1.344574e-62 |
| MsG0380017804.01 | MsG0480019838.01 | 0.837824 | 4.139277e-57 | 5.441413e-54 |
| MsG0380017804.01 | MsG0480019975.01 | 0.847792 | 9.240705e-60 | 1.661026e-56 |
| MsG0380017804.01 | MsG0480020842.01 | 0.805133 | 1.546394e-49 | 8.117431e-47 |
| MsG0380017804.01 | MsG0480020957.01 | -0.827337 | 1.654235e-54 | 1.592500e-51 |
| MsG0380017804.01 | MsG0480020958.01 | -0.852952 | 3.292613e-61 | 6.998330e-58 |
| MsG0380017804.01 | MsG0480021054.01 | 0.813194 | 2.896383e-51 | 1.878822e-48 |
| MsG0380017804.01 | MsG0480021327.01 | 0.814963 | 1.178663e-51 | 8.021461e-49 |
| MsG0380017804.01 | MsG0480021331.01 | 0.809372 | 1.954525e-50 | 1.145583e-47 |
| MsG0380017804.01 | MsG0480021476.01 | 0.831599 | 1.523370e-55 | 1.661179e-52 |
| MsG0380017804.01 | MsG0480021553.01 | -0.828281 | 9.807810e-55 | 9.703945e-52 |
| MsG0380017804.01 | MsG0480021912.01 | 0.849432 | 3.246233e-60 | 6.152435e-57 |
| MsG0380017804.01 | MsG0480022588.01 | -0.806381 | 8.455961e-50 | 4.582953e-47 |
| MsG0380017804.01 | MsG0480022591.01 | 0.841092 | 5.860185e-58 | 8.517352e-55 |
| MsG0380017804.01 | MsG0480023152.01 | 0.861705 | 8.500952e-64 | 2.426413e-60 |
| MsG0380017804.01 | MsG0480023195.01 | -0.801819 | 7.521689e-49 | 3.626903e-46 |
| MsG0380017804.01 | MsG0480023242.01 | 0.833732 | 4.504912e-56 | 5.233549e-53 |
| MsG0380017804.01 | MsG0480023244.01 | 0.806030 | 1.002679e-49 | 5.385950e-47 |
| MsG0380017804.01 | MsG0480023480.01 | 0.855840 | 4.815866e-62 | 1.126795e-58 |
| MsG0380017804.01 | MsG0480023481.01 | 0.844973 | 5.423209e-59 | 8.904760e-56 |
| MsG0380017804.01 | MsG0480023695.01 | 0.831991 | 1.219454e-55 | 1.345242e-52 |
| MsG0380017804.01 | MsG0580024278.01 | 0.804171 | 2.455470e-49 | 1.257369e-46 |
| MsG0380017804.01 | MsG0580024309.01 | 0.805719 | 1.165593e-49 | 6.211592e-47 |
| MsG0380017804.01 | MsG0580024398.01 | -0.825208 | 5.314424e-54 | 4.812537e-51 |
| MsG0380017804.01 | MsG0580024488.01 | -0.813666 | 2.280498e-51 | 1.498544e-48 |
| MsG0380017804.01 | MsG0580024493.01 | 0.829026 | 6.478434e-55 | 6.550231e-52 |
| MsG0380017804.01 | MsG0580024656.01 | 0.811186 | 7.940484e-51 | 4.882588e-48 |
| MsG0380017804.01 | MsG0580024678.01 | 0.807051 | 6.104359e-50 | 3.365989e-47 |
| MsG0380017804.01 | MsG0580025105.01 | 0.814967 | 1.176391e-51 | 8.006731e-49 |
| MsG0380017804.01 | MsG0580025117.01 | -0.813854 | 2.072782e-51 | 1.368946e-48 |
| MsG0380017804.01 | MsG0580025419.01 | -0.822302 | 2.547295e-53 | 2.123933e-50 |
| MsG0380017804.01 | MsG0580025486.01 | 0.803159 | 3.981075e-49 | 1.986326e-46 |
| MsG0380017804.01 | MsG0580026362.01 | 0.817743 | 2.814190e-52 | 2.066727e-49 |
| MsG0380017804.01 | MsG0580029023.01 | -0.865194 | 7.045702e-65 | 2.272662e-61 |
| MsG0380017804.01 | MsG0580029583.01 | -0.810912 | 9.102145e-51 | 5.556878e-48 |
| MsG0380017804.01 | MsG0580029623.01 | -0.841030 | 6.083035e-58 | 8.824627e-55 |
| MsG0380017804.01 | MsG0580029792.01 | 0.874969 | 4.457039e-68 | 2.046355e-64 |
| MsG0380017804.01 | MsG0580030019.01 | -0.831425 | 1.681831e-55 | 1.824304e-52 |
| MsG0380017804.01 | MsG0580030197.01 | 0.806175 | 9.347142e-50 | 5.039542e-47 |
| MsG0380017804.01 | MsG0580030237.01 | 0.825606 | 4.276074e-54 | 3.916328e-51 |
| MsG0380017804.01 | MsG0680030315.01 | -0.817512 | 3.173696e-52 | 2.316018e-49 |
| MsG0380017804.01 | MsG0680031178.01 | -0.826000 | 3.449070e-54 | 3.194596e-51 |
| MsG0380017804.01 | MsG0680031813.01 | 0.815365 | 9.597366e-52 | 6.603605e-49 |
| MsG0380017804.01 | MsG0680031866.01 | 0.800344 | 1.506007e-48 | 6.995859e-46 |
| MsG0380017804.01 | MsG0680034318.01 | 0.815469 | 9.096990e-52 | 6.277772e-49 |
| MsG0380017804.01 | MsG0680035584.01 | 0.825375 | 4.851151e-54 | 4.413639e-51 |
| MsG0380017804.01 | MsG0680035870.01 | 0.857181 | 1.943663e-62 | 4.755936e-59 |
| MsG0380017804.01 | MsG0780037458.01 | 0.814753 | 1.312261e-51 | 8.880012e-49 |
| MsG0380017804.01 | MsG0780037751.01 | -0.811477 | 6.865930e-51 | 4.254498e-48 |
| MsG0380017804.01 | MsG0780038047.01 | 0.843253 | 1.570331e-58 | 2.442548e-55 |
| MsG0380017804.01 | MsG0780038305.01 | -0.819425 | 1.169384e-52 | 8.995524e-50 |
| MsG0380017804.01 | MsG0780039821.01 | 0.801537 | 8.591806e-49 | 4.113389e-46 |
| MsG0380017804.01 | MsG0780039836.01 | 0.817109 | 3.910792e-52 | 2.822418e-49 |
| MsG0380017804.01 | MsG0780039838.01 | 0.845473 | 3.972335e-59 | 6.627471e-56 |
| MsG0380017804.01 | MsG0780039839.01 | 0.836884 | 7.202929e-57 | 9.200265e-54 |
| MsG0380017804.01 | MsG0780040121.01 | 0.812483 | 4.144111e-51 | 2.638150e-48 |
| MsG0380017804.01 | MsG0780040266.01 | -0.825482 | 4.576265e-54 | 4.176220e-51 |
| MsG0380017804.01 | MsG0780040283.01 | 0.807938 | 3.958279e-50 | 2.233546e-47 |
| MsG0380017804.01 | MsG0780041121.01 | 0.807392 | 5.170357e-50 | 2.876420e-47 |
| MsG0380017804.01 | MsG0780041173.01 | 0.821910 | 3.139974e-53 | 2.588884e-50 |
| MsG0380017804.01 | MsG0780041254.01 | 0.840496 | 8.398165e-58 | 1.198449e-54 |
| MsG0380017804.01 | MsG0780041531.01 | 0.871435 | 6.850140e-67 | 2.763485e-63 |
| MsG0380017804.01 | MsG0780041620.01 | 0.815430 | 9.280787e-52 | 6.397329e-49 |
| MsG0380017804.01 | MsG0780041637.01 | 0.859710 | 3.425230e-63 | 9.130627e-60 |
| MsG0380017804.01 | MsG0780041720.01 | 0.818000 | 2.463110e-52 | 1.821597e-49 |
| MsG0380017804.01 | MsG0780041783.01 | 0.832431 | 9.491392e-56 | 1.060621e-52 |
| MsG0380017804.01 | MsG0880042588.01 | 0.812177 | 4.833449e-51 | 3.051663e-48 |
| MsG0380017804.01 | MsG0880042858.01 | 0.805207 | 1.491989e-49 | 7.846755e-47 |
| MsG0380017804.01 | MsG0880043261.01 | -0.838634 | 2.559547e-57 | 3.448977e-54 |
| MsG0380017804.01 | MsG0880044339.01 | 0.830395 | 3.008288e-55 | 3.165507e-52 |
| MsG0380017804.01 | MsG0880045188.01 | 0.833871 | 4.156551e-56 | 4.849787e-53 |
| MsG0380017804.01 | MsG0880045369.01 | 0.819325 | 1.232613e-52 | 9.454712e-50 |
| MsG0380017804.01 | MsG0880045385.01 | 0.833986 | 3.890932e-56 | 4.555590e-53 |
| MsG0380017804.01 | MsG0880045683.01 | -0.810794 | 9.653643e-51 | 5.874786e-48 |
| MsG0380017804.01 | MsG0880045804.01 | -0.813255 | 2.807902e-51 | 1.824467e-48 |
| MsG0380017804.01 | MsG0880045808.01 | -0.840186 | 1.011824e-57 | 1.430119e-54 |
| MsG0380017804.01 | MsG0880045968.01 | 0.843371 | 1.459733e-58 | 2.279249e-55 |
| MsG0380017804.01 | MsG0880046105.01 | 0.824035 | 1.003817e-53 | 8.789482e-51 |
| MsG0380017804.01 | MsG0880046167.01 | 0.860651 | 1.780098e-63 | 4.901952e-60 |
| MsG0380017804.01 | MsG0880046174.01 | 0.842502 | 2.486118e-58 | 3.777201e-55 |
| MsG0380017804.01 | MsG0880046219.01 | 0.819851 | 9.347148e-53 | 7.276222e-50 |
| MsG0380017804.01 | MsG0880046331.01 | 0.803105 | 4.085113e-49 | 2.035285e-46 |
| MsG0380017804.01 | MsG0880046341.01 | 0.816198 | 6.258783e-52 | 4.405956e-49 |
| MsG0380017804.01 | MsG0880046469.01 | 0.825857 | 3.728244e-54 | 3.439386e-51 |
| MsG0380017804.01 | MsG0880046630.01 | 0.837863 | 4.044769e-57 | 5.323454e-54 |
| MsG0380017804.01 | MsG0880047318.01 | 0.818626 | 1.776601e-52 | 1.336714e-49 |
| MsG0380017804.01 | MsG0880047465.01 | -0.802670 | 5.025209e-49 | 2.476159e-46 |
| MsG0380017804.01 | MsG0880047493.01 | -0.834496 | 2.898522e-56 | 3.445855e-53 |
| MsG0280006475.01 | MsG0380017804.01 | 0.809420 | 1.908851e-50 | 1.120252e-47 |
| MsG0280006485.01 | MsG0380017804.01 | -0.812625 | 3.857858e-51 | 2.465018e-48 |
| MsG0280006942.01 | MsG0380017804.01 | 0.809898 | 1.507268e-50 | 8.957732e-48 |
| MsG0280007052.01 | MsG0380017804.01 | -0.802267 | 6.085364e-49 | 2.967935e-46 |
| MsG0280007291.01 | MsG0380017804.01 | 0.801928 | 7.144298e-49 | 3.454388e-46 |
| MsG0280007426.01 | MsG0380017804.01 | -0.802017 | 6.850070e-49 | 3.319649e-46 |
| MsG0280007786.01 | MsG0380017804.01 | -0.829041 | 6.424960e-55 | 6.498890e-52 |
| MsG0280008328.01 | MsG0380017804.01 | -0.809327 | 1.998791e-50 | 1.170100e-47 |
| MsG0280008820.01 | MsG0380017804.01 | 0.855773 | 5.036450e-62 | 1.175852e-58 |
| MsG0280008863.01 | MsG0380017804.01 | 0.821934 | 3.100165e-53 | 2.557742e-50 |
| MsG0280008912.01 | MsG0380017804.01 | 0.843431 | 1.407572e-58 | 2.201783e-55 |
| MsG0280009008.01 | MsG0380017804.01 | 0.816199 | 6.255555e-52 | 4.403792e-49 |
| MsG0280009079.01 | MsG0380017804.01 | 0.816420 | 5.581022e-52 | 3.952563e-49 |
| MsG0280009742.01 | MsG0380017804.01 | 0.832516 | 9.040557e-56 | 1.012834e-52 |
| MsG0280009864.01 | MsG0380017804.01 | 0.822469 | 2.329257e-53 | 1.951348e-50 |
| MsG0280010227.01 | MsG0380017804.01 | 0.818697 | 1.711825e-52 | 1.290513e-49 |
| MsG0280010296.01 | MsG0380017804.01 | -0.807784 | 4.267098e-50 | 2.398219e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017804.01.T02 | MTR_3g112310 | 94.118 | 68 | 4 | 0 | 1 | 68 | 1 | 68 | 3.03e-38 | 130 |
| MsG0380017804.01.T02 | MTR_3g112310 | 94.118 | 68 | 4 | 0 | 1 | 68 | 1 | 68 | 1.70e-37 | 130 |
| MsG0380017804.01.T01 | MTR_3g112310 | 97.030 | 202 | 6 | 0 | 1 | 202 | 119 | 320 | 7.23e-145 | 407 |
| MsG0380017804.01.T01 | MTR_3g112310 | 97.030 | 202 | 6 | 0 | 1 | 202 | 119 | 320 | 1.85e-143 | 407 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017804.01.T01 | AT1G45110 | 69.608 | 204 | 62 | 0 | 1 | 204 | 106 | 309 | 2.77e-106 | 309 |
Find 62 sgRNAs with CRISPR-Local
Find 199 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTAAGAGAATTAATTGAAAA+TGG | 0.305796 | 3:+100809799 | MsG0380017804.01.T01:CDS |
| TGCATGCCCTTCAATCAATA+TGG | 0.318102 | 3:-100809731 | None:intergenic |
| ACGAATAGAAAATTCTTTGC+TGG | 0.338729 | 3:-100809689 | None:intergenic |
| TCCACTGATGAATTTACATT+TGG | 0.349806 | 3:+100808152 | MsG0380017804.01.T01:CDS |
| ACTCGGGATCAAGAAGAAAA+AGG | 0.373239 | 3:+100808286 | MsG0380017804.01.T01:CDS |
| TAAAATTGAATGTGTCTATT+GGG | 0.375797 | 3:-100809848 | None:intergenic |
| CACCATTGTTCAGGGCTCTC+CGG | 0.379351 | 3:+100807665 | MsG0380017804.01.T01:intron |
| CTTCTTGATCCCGAGTGCTT+TGG | 0.381141 | 3:-100808279 | None:intergenic |
| AATCCCAGGTCCATGTGCTT+TGG | 0.393976 | 3:+100808103 | MsG0380017804.01.T01:CDS |
| GGACCTGGGATTGGAACAAC+AGG | 0.427981 | 3:-100808092 | None:intergenic |
| ATCTTGAAGACATCACCTTC+AGG | 0.445097 | 3:+100807489 | MsG0380017804.01.T01:five_prime_UTR |
| CTTTCTCAGTTTCTTGAAGA+GGG | 0.449860 | 3:+100808366 | MsG0380017804.01.T01:CDS |
| GGTATCGGCTCTTTCTGCCT+CGG | 0.453758 | 3:+100808124 | MsG0380017804.01.T01:CDS |
| AGGTCCATGTGCTTTGGTAT+CGG | 0.460351 | 3:+100808109 | MsG0380017804.01.T01:CDS |
| GTATCGGCTCTTTCTGCCTC+GGG | 0.462242 | 3:+100808125 | MsG0380017804.01.T01:CDS |
| CGGAAGACACGAGGCACTCT+GGG | 0.466378 | 3:+100807716 | MsG0380017804.01.T01:five_prime_UTR |
| ACCATTGTTCAGGGCTCTCC+GGG | 0.474185 | 3:+100807666 | MsG0380017804.01.T01:intron |
| AATATGGTAAGTTCTCCCTT+TGG | 0.477519 | 3:-100809715 | None:intergenic |
| AAAGCACATGGACCTGGGAT+TGG | 0.488329 | 3:-100808101 | None:intergenic |
| TCGGAAGACACGAGGCACTC+TGG | 0.490083 | 3:+100807715 | MsG0380017804.01.T01:five_prime_UTR |
| GAACTTACCATATTGATTGA+AGG | 0.490717 | 3:+100809724 | MsG0380017804.01.T01:CDS |
| ATAAGTGACGCTGGAACGCC+TGG | 0.495165 | 3:+100807930 | MsG0380017804.01.T01:CDS |
| GTTCCTGTTGTTCCAATCCC+AGG | 0.500390 | 3:+100808089 | MsG0380017804.01.T01:CDS |
| ACGCCTGGTATCAGTGATCC+TGG | 0.507533 | 3:+100807945 | MsG0380017804.01.T01:CDS |
| CATGGCTTCAGCAGAGCAAA+CGG | 0.510069 | 3:+100808311 | MsG0380017804.01.T01:CDS |
| CTCCGCTGATGTTATACTAT+CGG | 0.517324 | 3:+100807696 | MsG0380017804.01.T01:five_prime_UTR |
| CAGTGATCCTGGTATGGAGT+TGG | 0.526144 | 3:+100807956 | MsG0380017804.01.T01:CDS |
| CAAATTCAATGAATCACAAA+GGG | 0.528109 | 3:+100807860 | MsG0380017804.01.T01:CDS |
| GATACCAAAGCACATGGACC+TGG | 0.530974 | 3:-100808107 | None:intergenic |
| GCTTTCTCAGTTTCTTGAAG+AGG | 0.533813 | 3:+100808365 | MsG0380017804.01.T01:CDS |
| CAAACCGGTCTTTATCTCGT+TGG | 0.533856 | 3:+100807452 | MsG0380017804.01.T01:five_prime_UTR |
| TTCTCAAGCTCAATGTCCGA+TGG | 0.538928 | 3:-100809772 | None:intergenic |
| TTCTAAAGTTGAACCTCCAT+CGG | 0.541066 | 3:+100809756 | MsG0380017804.01.T01:CDS |
| AAAGGGAACAACTTGTGCTC+AGG | 0.542988 | 3:+100807877 | MsG0380017804.01.T01:CDS |
| TGGTATCAGTGATCCTGGTA+TGG | 0.543755 | 3:+100807950 | MsG0380017804.01.T01:CDS |
| GATGTCTTCAAGATTTCCGA+TGG | 0.546308 | 3:-100807480 | None:intergenic |
| TCGCTCGCAGCATCTCAAAC+CGG | 0.547096 | 3:+100807437 | MsG0380017804.01.T01:five_prime_UTR |
| AACTTACCATATTGATTGAA+GGG | 0.547874 | 3:+100809725 | MsG0380017804.01.T01:CDS |
| GTACTTACCAACTCCATACC+AGG | 0.553636 | 3:-100807963 | None:intergenic |
| TATCTCGTTGGAACACCCAT+CGG | 0.564506 | 3:+100807464 | MsG0380017804.01.T01:five_prime_UTR |
| CTATTGGGAAGCTATTACCG+TGG | 0.577974 | 3:-100809833 | None:intergenic |
| GGGAACAACTTGTGCTCAGG+AGG | 0.587717 | 3:+100807880 | MsG0380017804.01.T01:CDS |
| TGTTCCAACGAGATAAAGAC+CGG | 0.590343 | 3:-100807456 | None:intergenic |
| AGAAACTGAGAAAGCTTGTG+TGG | 0.598616 | 3:-100808357 | None:intergenic |
| ACAAATTCAATGAATCACAA+AGG | 0.598902 | 3:+100807859 | MsG0380017804.01.T01:CDS |
| AATGACAAAGTTTCACGAAG+AGG | 0.615304 | 3:+100808773 | MsG0380017804.01.T01:CDS |
| ACCAAATGTAAATTCATCAG+TGG | 0.627138 | 3:-100808153 | None:intergenic |
| GTGGCACTTATAAGTGACGC+TGG | 0.634936 | 3:+100807921 | MsG0380017804.01.T01:CDS |
| ATGTCTTCAAGATTTCCGAT+GGG | 0.635435 | 3:-100807479 | None:intergenic |
| ATACCAAAGCACATGGACCT+GGG | 0.636160 | 3:-100808106 | None:intergenic |
| ATACCAGGATCACTGATACC+AGG | 0.638129 | 3:-100807948 | None:intergenic |
| TCAAGCTCAATGTCCGATGG+AGG | 0.640534 | 3:-100809769 | None:intergenic |
| TTCCGATAGTATAACATCAG+CGG | 0.642678 | 3:-100807698 | None:intergenic |
| AACTGAGAAAGCTTGTGTGG+AGG | 0.643791 | 3:-100808354 | None:intergenic |
| GTTGAAACAAGGTGAGATTG+TGG | 0.644732 | 3:+100807902 | MsG0380017804.01.T01:CDS |
| AAATGGCGAGAGTCTTTCCA+CGG | 0.651793 | 3:+100809816 | MsG0380017804.01.T01:CDS |
| ATGCAGGCCAAATTATGTGT+TGG | 0.654583 | 3:+100808059 | MsG0380017804.01.T01:intron |
| GTGCTCAGGAGGTTGAAACA+AGG | 0.672276 | 3:+100807891 | MsG0380017804.01.T01:CDS |
| TTCATCAGTGGATAAACCCG+AGG | 0.672572 | 3:-100808141 | None:intergenic |
| CATCAGCGGAGTTCAACACC+CGG | 0.673155 | 3:-100807684 | None:intergenic |
| AGAGCCGATACCAAAGCACA+TGG | 0.677490 | 3:-100808113 | None:intergenic |
| TTATACTATCGGAAGACACG+AGG | 0.685377 | 3:+100807707 | MsG0380017804.01.T01:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTAAGTTTATCATAATAA+TGG | - | Chr3:100809505-100809524 | None:intergenic | 10.0% |
| !! | ATTACAAGTTTATTATTATC+TGG | - | Chr3:100807319-100807338 | None:intergenic | 15.0% |
| !!! | TCATGAATTATTTTAATTGA+AGG | + | Chr3:100809466-100809485 | MsG0380017804.01.T01:intron | 15.0% |
| !! | ACTAGAAAAAATACATTGAT+GGG | - | Chr3:100808249-100808268 | None:intergenic | 20.0% |
| !! | CAACTCAAAAATATAAAAGT+GGG | - | Chr3:100808515-100808534 | None:intergenic | 20.0% |
| !! | CATAAGATGAATAAAATTCA+AGG | - | Chr3:100808627-100808646 | None:intergenic | 20.0% |
| !! | CTAAGAGAATTAATTGAAAA+TGG | + | Chr3:100809799-100809818 | MsG0380017804.01.T01:CDS | 20.0% |
| !!! | ACATTTTTCATTATGCATTT+TGG | + | Chr3:100807518-100807537 | MsG0380017804.01.T01:intron | 20.0% |
| !!! | ATCAATGTATTTTTTCTAGT+CGG | + | Chr3:100808249-100808268 | MsG0380017804.01.T01:intron | 20.0% |
| !!! | CATGAAAAAGAAATTGTTTT+AGG | + | Chr3:100809040-100809059 | MsG0380017804.01.T01:intron | 20.0% |
| !!! | CCAATTTTAATAGAAAAGAA+GGG | + | Chr3:100807146-100807165 | MsG0380017804.01.T01:five_prime_UTR | 20.0% |
| !!! | TCCAATTTTAATAGAAAAGA+AGG | + | Chr3:100807145-100807164 | MsG0380017804.01.T01:five_prime_UTR | 20.0% |
| ! | AAGATGAATAAAATTCAAGG+TGG | - | Chr3:100808624-100808643 | None:intergenic | 25.0% |
| ! | AATAAGAACAAACAAGTCAT+TGG | - | Chr3:100809569-100809588 | None:intergenic | 25.0% |
| ! | AATCGTTGAAAAAATTTAGC+AGG | - | Chr3:100809067-100809086 | None:intergenic | 25.0% |
| ! | ACAAATTCAATGAATCACAA+AGG | + | Chr3:100807859-100807878 | MsG0380017804.01.T01:CDS | 25.0% |
| ! | AGATGAATAAAATTCAAGGT+GGG | - | Chr3:100808623-100808642 | None:intergenic | 25.0% |
| ! | ATGAGTGATGTATATTCATT+GGG | - | Chr3:100809450-100809469 | None:intergenic | 25.0% |
| ! | ATTACGATTAAGGAAAAGTT+TGG | - | Chr3:100808419-100808438 | None:intergenic | 25.0% |
| ! | CAAATCAAACAAACAGTTTA+AGG | - | Chr3:100808591-100808610 | None:intergenic | 25.0% |
| ! | CAAATTCAATGAATCACAAA+GGG | + | Chr3:100807860-100807879 | MsG0380017804.01.T01:CDS | 25.0% |
| ! | CCAACTCAAAAATATAAAAG+TGG | - | Chr3:100808516-100808535 | None:intergenic | 25.0% |
| ! | GACTAGAAAAAATACATTGA+TGG | - | Chr3:100808250-100808269 | None:intergenic | 25.0% |
| ! | GCATATGAGTTAAAAAACTA+AGG | - | Chr3:100808933-100808952 | None:intergenic | 25.0% |
| ! | TAAGGAATAAAAGAGAAAGT+TGG | - | Chr3:100809275-100809294 | None:intergenic | 25.0% |
| ! | TCACAAAATTAGCAAATCAA+TGG | - | Chr3:100808544-100808563 | None:intergenic | 25.0% |
| ! | TCTCTTGTTAATGTAATGTA+CGG | + | Chr3:100809181-100809200 | MsG0380017804.01.T01:intron | 25.0% |
| ! | TGAGAAAAACAATAACATGA+TGG | - | Chr3:100809022-100809041 | None:intergenic | 25.0% |
| ! | TTAATTCATTCCATTAGTGT+TGG | - | Chr3:100808955-100808974 | None:intergenic | 25.0% |
| !! | AACTTACCATATTGATTGAA+GGG | + | Chr3:100809725-100809744 | MsG0380017804.01.T01:CDS | 25.0% |
| !! | ATTTTCACCAACACATAATT+TGG | - | Chr3:100808069-100808088 | None:intergenic | 25.0% |
| !! | CCCTTCTTTTCTATTAAAAT+TGG | - | Chr3:100807149-100807168 | None:intergenic | 25.0% |
| !! | TCTCTTTTATTCCTTAACTA+CGG | + | Chr3:100809279-100809298 | MsG0380017804.01.T01:intron | 25.0% |
| !!! | AACATAATCATTGCTTTTTG+CGG | - | Chr3:100809404-100809423 | None:intergenic | 25.0% |
| !!! | AGTACTTTTAATTTAACCAG+TGG | + | Chr3:100808897-100808916 | MsG0380017804.01.T01:intron | 25.0% |
| !!! | CCACTTTTATATTTTTGAGT+TGG | + | Chr3:100808513-100808532 | MsG0380017804.01.T01:intron | 25.0% |
| !!! | GTACTTTTAATTTAACCAGT+GGG | + | Chr3:100808898-100808917 | MsG0380017804.01.T01:intron | 25.0% |
| !!! | TTATTTTAACAACGTTCTCT+AGG | + | Chr3:100809584-100809603 | MsG0380017804.01.T01:intron | 25.0% |
| !!! | TTGATTTGTTTTCCATGATT+GGG | + | Chr3:100809125-100809144 | MsG0380017804.01.T01:intron | 25.0% |
| AAAAACTGAGTGAATGTTGA+GGG | - | Chr3:100807376-100807395 | None:intergenic | 30.0% | |
| AATTAACTGACTGAACGATA+TGG | + | Chr3:100808176-100808195 | MsG0380017804.01.T01:intron | 30.0% | |
| AATTTAACCAGTGGGAATAA+AGG | + | Chr3:100808906-100808925 | MsG0380017804.01.T01:intron | 30.0% | |
| ACCAAATGTAAATTCATCAG+TGG | - | Chr3:100808156-100808175 | None:intergenic | 30.0% | |
| ACGAATAGAAAATTCTTTGC+TGG | - | Chr3:100809692-100809711 | None:intergenic | 30.0% | |
| AGAACATAGTACTTATGTTC+AGG | - | Chr3:100808456-100808475 | None:intergenic | 30.0% | |
| ATCCTTCTGACATCAATATT+TGG | + | Chr3:100808810-100808829 | MsG0380017804.01.T01:intron | 30.0% | |
| ATTAACTGACTGAACGATAT+GGG | + | Chr3:100808177-100808196 | MsG0380017804.01.T01:intron | 30.0% | |
| ATTAATTCCTGTCATAAGTG+TGG | + | Chr3:100809523-100809542 | MsG0380017804.01.T01:intron | 30.0% | |
| CAATAACATGATGGTAAAGA+AGG | - | Chr3:100809013-100809032 | None:intergenic | 30.0% | |
| CATGAGTGATGTATATTCAT+TGG | - | Chr3:100809451-100809470 | None:intergenic | 30.0% | |
| GAAAAATGTTTCATACCTGA+AGG | - | Chr3:100807507-100807526 | None:intergenic | 30.0% | |
| GAAAAGTAAAGCCTAGAAAA+TGG | - | Chr3:100807354-100807373 | None:intergenic | 30.0% | |
| TAAGCATGCAATTACGATTA+AGG | - | Chr3:100808429-100808448 | None:intergenic | 30.0% | |
| TACCAAATATTGATGTCAGA+AGG | - | Chr3:100808815-100808834 | None:intergenic | 30.0% | |
| TCCACTGATGAATTTACATT+TGG | + | Chr3:100808152-100808171 | MsG0380017804.01.T01:CDS | 30.0% | |
| TTAATTCCTGTCATAAGTGT+GGG | + | Chr3:100809524-100809543 | MsG0380017804.01.T01:intron | 30.0% | |
| ! | GAACTTACCATATTGATTGA+AGG | + | Chr3:100809724-100809743 | MsG0380017804.01.T01:CDS | 30.0% |
| ! | GCACATCAATTTTGTAGTTT+TGG | + | Chr3:100809647-100809666 | MsG0380017804.01.T01:intron | 30.0% |
| ! | TCATTTTCGTTCCATTTTCT+AGG | + | Chr3:100807340-100807359 | MsG0380017804.01.T01:intron | 30.0% |
| ! | TTTTCTGTTTGTAACTTCTC+TGG | + | Chr3:100809351-100809370 | MsG0380017804.01.T01:intron | 30.0% |
| !! | CTTCATTTTGATGATATTGC+AGG | + | Chr3:100808730-100808749 | MsG0380017804.01.T01:intron | 30.0% |
| !! | TGCGAATTATCTTATTTCTG+TGG | + | Chr3:100808854-100808873 | MsG0380017804.01.T01:intron | 30.0% |
| !!! | CTTGATTTGTTTTCCATGAT+TGG | + | Chr3:100809124-100809143 | MsG0380017804.01.T01:intron | 30.0% |
| AACTCATATGCCAACACTAA+TGG | + | Chr3:100808942-100808961 | MsG0380017804.01.T01:intron | 35.0% | |
| AATATGGTAAGTTCTCCCTT+TGG | - | Chr3:100809718-100809737 | None:intergenic | 35.0% | |
| AATGAAGAGTCAACCAATCT+AGG | - | Chr3:100808717-100808736 | None:intergenic | 35.0% | |
| AATGACAAAGTTTCACGAAG+AGG | + | Chr3:100808773-100808792 | MsG0380017804.01.T01:CDS | 35.0% | |
| AGTGATACCTATGTTCGTTA+GGG | + | Chr3:100808677-100808696 | MsG0380017804.01.T01:intron | 35.0% | |
| ATAGTTCTCTTGCTCTTTCT+TGG | + | Chr3:100809221-100809240 | MsG0380017804.01.T01:intron | 35.0% | |
| ATCAAGAAGAAAAAGGCTCA+TGG | + | Chr3:100808293-100808312 | MsG0380017804.01.T01:CDS | 35.0% | |
| ATGTCTTCAAGATTTCCGAT+GGG | - | Chr3:100807482-100807501 | None:intergenic | 35.0% | |
| ATTCCTTAACTCTGGTTGAA+GGG | + | Chr3:100809084-100809103 | MsG0380017804.01.T01:intron | 35.0% | |
| CAAAAACTGAGTGAATGTTG+AGG | - | Chr3:100807377-100807396 | None:intergenic | 35.0% | |
| CTTTCTCAGTTTCTTGAAGA+GGG | + | Chr3:100808366-100808385 | MsG0380017804.01.T01:CDS | 35.0% | |
| GAAAAGGAAGAAGAATACAG+TGG | - | Chr3:100807226-100807245 | None:intergenic | 35.0% | |
| TAGTTCTCTTGCTCTTTCTT+GGG | + | Chr3:100809222-100809241 | MsG0380017804.01.T01:intron | 35.0% | |
| TGAAATGAAATTTCCCGAAG+TGG | - | Chr3:100807798-100807817 | None:intergenic | 35.0% | |
| TGATAAGAGTAAACAAGCAC+AGG | - | Chr3:100807998-100808017 | None:intergenic | 35.0% | |
| TTCCGATAGTATAACATCAG+CGG | - | Chr3:100807701-100807720 | None:intergenic | 35.0% | |
| TTTCAACGATTCCTTAACTC+TGG | + | Chr3:100809076-100809095 | MsG0380017804.01.T01:intron | 35.0% | |
| ! | AAGAAGGGAAAATGTTGCTT+CGG | + | Chr3:100807161-100807180 | MsG0380017804.01.T01:five_prime_UTR | 35.0% |
| ! | ACACAACACTTAGCTCATTT+TGG | + | Chr3:100807638-100807657 | MsG0380017804.01.T01:intron | 35.0% |
| ! | ATTTTCTATTCGTCAGCCAA+AGG | + | Chr3:100809699-100809718 | MsG0380017804.01.T01:CDS | 35.0% |
| ! | CATTGATGGGCAATTACTTT+AGG | - | Chr3:100808236-100808255 | None:intergenic | 35.0% |
| ! | TTTTCTATTCGTCAGCCAAA+GGG | + | Chr3:100809700-100809719 | MsG0380017804.01.T01:CDS | 35.0% |
| !! | AAAGGTAAGTTGCTTTGGAA+TGG | - | Chr3:100807248-100807267 | None:intergenic | 35.0% |
| !! | AAGTTGCTTTGGAATGGAAA+AGG | - | Chr3:100807242-100807261 | None:intergenic | 35.0% |
| !! | ATTTGTTTTCCATGATTGGG+AGG | + | Chr3:100809128-100809147 | MsG0380017804.01.T01:intron | 35.0% |
| !! | TTCTAAAGTTGAACCTCCAT+CGG | + | Chr3:100809756-100809775 | MsG0380017804.01.T01:CDS | 35.0% |
| !!! | TCAATTTTGTAGTTTTGGCG+CGG | + | Chr3:100809652-100809671 | MsG0380017804.01.T01:intron | 35.0% |
| ACTACTTCCCTAACGAACAT+AGG | - | Chr3:100808687-100808706 | None:intergenic | 40.0% | |
| ACTCGGGATCAAGAAGAAAA+AGG | + | Chr3:100808286-100808305 | MsG0380017804.01.T01:CDS | 40.0% | |
| AGAAACTGAGAAAGCTTGTG+TGG | - | Chr3:100808360-100808379 | None:intergenic | 40.0% | |
| AGTAGTAGCAAGTCCTAGAT+TGG | + | Chr3:100808701-100808720 | MsG0380017804.01.T01:intron | 40.0% | |
| ATCTTGAAGACATCACCTTC+AGG | + | Chr3:100807489-100807508 | MsG0380017804.01.T01:five_prime_UTR | 40.0% | |
| ATGAAATTTCCCGAAGTGGA+AGG | - | Chr3:100807794-100807813 | None:intergenic | 40.0% | |
| ATGCAGGCCAAATTATGTGT+TGG | + | Chr3:100808059-100808078 | MsG0380017804.01.T01:intron | 40.0% | |
| CAGTGATACCTATGTTCGTT+AGG | + | Chr3:100808676-100808695 | MsG0380017804.01.T01:intron | 40.0% | |
| CATGAATATCATCACGCACA+AGG | - | Chr3:100808042-100808061 | None:intergenic | 40.0% | |
| CTCCGCTGATGTTATACTAT+CGG | + | Chr3:100807696-100807715 | MsG0380017804.01.T01:five_prime_UTR | 40.0% | |
| GAAAAGGAAGAGGCTTACAA+GGG | - | Chr3:100807772-100807791 | None:intergenic | 40.0% | |
| GAAGAAGAATACAGTGGAAG+AGG | - | Chr3:100807220-100807239 | None:intergenic | 40.0% | |
| GATGTCTTCAAGATTTCCGA+TGG | - | Chr3:100807483-100807502 | None:intergenic | 40.0% | |
| GATTCCTTAACTCTGGTTGA+AGG | + | Chr3:100809083-100809102 | MsG0380017804.01.T01:intron | 40.0% | |
| GCTTTCTCAGTTTCTTGAAG+AGG | + | Chr3:100808365-100808384 | MsG0380017804.01.T01:CDS | 40.0% | |
| GTGCTATAAAGCTCCAATCA+TGG | - | Chr3:100809253-100809272 | None:intergenic | 40.0% | |
| GTTGAAACAAGGTGAGATTG+TGG | + | Chr3:100807902-100807921 | MsG0380017804.01.T01:CDS | 40.0% | |
| TATAAAAGTGGGAGACGAGA+AGG | - | Chr3:100808504-100808523 | None:intergenic | 40.0% | |
| TGCATGCCCTTCAATCAATA+TGG | - | Chr3:100809734-100809753 | None:intergenic | 40.0% | |
| TGTTCCAACGAGATAAAGAC+CGG | - | Chr3:100807459-100807478 | None:intergenic | 40.0% | |
| TTATACTATCGGAAGACACG+AGG | + | Chr3:100807707-100807726 | MsG0380017804.01.T01:five_prime_UTR | 40.0% | |
| TTCATGTTCCTGCAAGTGAA+GGG | - | Chr3:100807406-100807425 | None:intergenic | 40.0% | |
| TTGGTTCACACCATTGTTCA+GGG | + | Chr3:100807657-100807676 | MsG0380017804.01.T01:intron | 40.0% | |
| TTTCATGTTCCTGCAAGTGA+AGG | - | Chr3:100807407-100807426 | None:intergenic | 40.0% | |
| ! | CGTCAATTTTCGGAGATACA+AGG | + | Chr3:100808391-100808410 | MsG0380017804.01.T01:CDS | 40.0% |
| ! | GAAGAGGGTTCGTCAATTTT+CGG | + | Chr3:100808381-100808400 | MsG0380017804.01.T01:CDS | 40.0% |
| ! | TCTTCCTTTTCCTTCCACTT+CGG | + | Chr3:100807781-100807800 | MsG0380017804.01.T01:intron | 40.0% |
| ! | TTTGGTTCACACCATTGTTC+AGG | + | Chr3:100807656-100807675 | MsG0380017804.01.T01:intron | 40.0% |
| AAAGGGAACAACTTGTGCTC+AGG | + | Chr3:100807877-100807896 | MsG0380017804.01.T01:CDS | 45.0% | |
| AAATGGCGAGAGTCTTTCCA+CGG | + | Chr3:100809816-100809835 | MsG0380017804.01.T01:CDS | 45.0% | |
| AACTGACTGAACGATATGGG+CGG | + | Chr3:100808180-100808199 | MsG0380017804.01.T01:intron | 45.0% | |
| AACTGAGAAAGCTTGTGTGG+AGG | - | Chr3:100808357-100808376 | None:intergenic | 45.0% | |
| AGAATACAGTGGAAGAGGTG+CGG | - | Chr3:100807215-100807234 | None:intergenic | 45.0% | |
| AGGTCCATGTGCTTTGGTAT+CGG | + | Chr3:100808109-100808128 | MsG0380017804.01.T01:CDS | 45.0% | |
| AGGTGGAGCAGAAGGATAAA+GGG | - | Chr3:100807273-100807292 | None:intergenic | 45.0% | |
| ATACCAAAGCACATGGACCT+GGG | - | Chr3:100808109-100808128 | None:intergenic | 45.0% | |
| ATACCAGGATCACTGATACC+AGG | - | Chr3:100807951-100807970 | None:intergenic | 45.0% | |
| ATGCTGAGTGAGATGGAGTT+CGG | - | Chr3:100807296-100807315 | None:intergenic | 45.0% | |
| CAAACCGGTCTTTATCTCGT+TGG | + | Chr3:100807452-100807471 | MsG0380017804.01.T01:five_prime_UTR | 45.0% | |
| CACGGTAATAGCTTCCCAAT+AGG | + | Chr3:100809834-100809853 | MsG0380017804.01.T01:CDS | 45.0% | |
| CATCCCTTCAACCAGAGTTA+AGG | - | Chr3:100809090-100809109 | None:intergenic | 45.0% | |
| CTAAGGACCTTTATTCCCAC+TGG | - | Chr3:100808916-100808935 | None:intergenic | 45.0% | |
| CTATTGGGAAGCTATTACCG+TGG | - | Chr3:100809836-100809855 | None:intergenic | 45.0% | |
| GAAGTGGAAGGAAAAGGAAG+AGG | - | Chr3:100807782-100807801 | None:intergenic | 45.0% | |
| GCAGAAGGATAAAGGGGAAA+AGG | - | Chr3:100807266-100807285 | None:intergenic | 45.0% | |
| GGAAAAGGAAGAGGCTTACA+AGG | - | Chr3:100807773-100807792 | None:intergenic | 45.0% | |
| GGGGAAAAGGTAAGTTGCTT+TGG | - | Chr3:100807253-100807272 | None:intergenic | 45.0% | |
| GGTATCACTGATGCAACTTG+TGG | - | Chr3:100808666-100808685 | None:intergenic | 45.0% | |
| GTACTTACCAACTCCATACC+AGG | - | Chr3:100807966-100807985 | None:intergenic | 45.0% | |
| GTGCGTGATGATATTCATGC+AGG | + | Chr3:100808043-100808062 | MsG0380017804.01.T01:intron | 45.0% | |
| TATCTCGTTGGAACACCCAT+CGG | + | Chr3:100807464-100807483 | MsG0380017804.01.T01:five_prime_UTR | 45.0% | |
| TATCTGGATGCTGAGTGAGA+TGG | - | Chr3:100807303-100807322 | None:intergenic | 45.0% | |
| TATGTGCCCACACTTATGAC+AGG | - | Chr3:100809533-100809552 | None:intergenic | 45.0% | |
| TCCATGATTGGGAGGTTATG+CGG | + | Chr3:100809136-100809155 | MsG0380017804.01.T01:intron | 45.0% | |
| TCCTCAAGATTGGTGAAGCT+GGG | + | Chr3:100809319-100809338 | MsG0380017804.01.T01:intron | 45.0% | |
| TGGTATCAGTGATCCTGGTA+TGG | + | Chr3:100807950-100807969 | MsG0380017804.01.T01:CDS | 45.0% | |
| TGGTGCAGTAACCGTAGTTA+AGG | - | Chr3:100809293-100809312 | None:intergenic | 45.0% | |
| TTCATCAGTGGATAAACCCG+AGG | - | Chr3:100808144-100808163 | None:intergenic | 45.0% | |
| TTCTCAAGCTCAATGTCCGA+TGG | - | Chr3:100809775-100809794 | None:intergenic | 45.0% | |
| TTCTTGGGTCATGCCATGAT+TGG | + | Chr3:100809237-100809256 | MsG0380017804.01.T01:intron | 45.0% | |
| TTTCCCGAAGTGGAAGGAAA+AGG | - | Chr3:100807788-100807807 | None:intergenic | 45.0% | |
| ! | CTGGTTGAAGGGATGCTTTT+GGG | + | Chr3:100809095-100809114 | MsG0380017804.01.T01:intron | 45.0% |
| ! | CTTCCTTTTCCTTCCACTTC+GGG | + | Chr3:100807782-100807801 | MsG0380017804.01.T01:intron | 45.0% |
| ! | TCTGGTTGAAGGGATGCTTT+TGG | + | Chr3:100809094-100809113 | MsG0380017804.01.T01:intron | 45.0% |
| !! | CGGTTTTCTTCCAAAGCACT+CGG | + | Chr3:100808269-100808288 | MsG0380017804.01.T01:CDS | 45.0% |
| !! | GGTTTTCTTCCAAAGCACTC+GGG | + | Chr3:100808270-100808289 | MsG0380017804.01.T01:CDS | 45.0% |
| !!! | TAGTTTTGGCGCGGTACTTT+TGG | + | Chr3:100809661-100809680 | MsG0380017804.01.T01:intron | 45.0% |
| AAAGCACATGGACCTGGGAT+TGG | - | Chr3:100808104-100808123 | None:intergenic | 50.0% | |
| AATCCCAGGTCCATGTGCTT+TGG | + | Chr3:100808103-100808122 | MsG0380017804.01.T01:CDS | 50.0% | |
| ACCAATCTTGAGGAGAGGCA+TGG | - | Chr3:100809313-100809332 | None:intergenic | 50.0% | |
| ACCATGCCTCTCCTCAAGAT+TGG | + | Chr3:100809309-100809328 | MsG0380017804.01.T01:intron | 50.0% | |
| AGAGCCGATACCAAAGCACA+TGG | - | Chr3:100808116-100808135 | None:intergenic | 50.0% | |
| CAGTGATCCTGGTATGGAGT+TGG | + | Chr3:100807956-100807975 | MsG0380017804.01.T01:CDS | 50.0% | |
| CATGGCTTCAGCAGAGCAAA+CGG | + | Chr3:100808311-100808330 | MsG0380017804.01.T01:CDS | 50.0% | |
| CCTCAAGATTGGTGAAGCTG+GGG | + | Chr3:100809320-100809339 | MsG0380017804.01.T01:intron | 50.0% | |
| CTCCTCAAGATTGGTGAAGC+TGG | + | Chr3:100809318-100809337 | MsG0380017804.01.T01:intron | 50.0% | |
| CTTCTTGATCCCGAGTGCTT+TGG | - | Chr3:100808282-100808301 | None:intergenic | 50.0% | |
| GAGGTGGAGCAGAAGGATAA+AGG | - | Chr3:100807274-100807293 | None:intergenic | 50.0% | |
| GATACCAAAGCACATGGACC+TGG | - | Chr3:100808110-100808129 | None:intergenic | 50.0% | |
| GCTTCACCAATCTTGAGGAG+AGG | - | Chr3:100809318-100809337 | None:intergenic | 50.0% | |
| GGTGGAGCAGAAGGATAAAG+GGG | - | Chr3:100807272-100807291 | None:intergenic | 50.0% | |
| GTGCTCAGGAGGTTGAAACA+AGG | + | Chr3:100807891-100807910 | MsG0380017804.01.T01:CDS | 50.0% | |
| GTGGCACTTATAAGTGACGC+TGG | + | Chr3:100807921-100807940 | MsG0380017804.01.T01:CDS | 50.0% | |
| GTTCCTGTTGTTCCAATCCC+AGG | + | Chr3:100808089-100808108 | MsG0380017804.01.T01:CDS | 50.0% | |
| TCAAGCTCAATGTCCGATGG+AGG | - | Chr3:100809772-100809791 | None:intergenic | 50.0% | |
| TGAGTCTTCCCTTCACTTGC+AGG | + | Chr3:100807395-100807414 | MsG0380017804.01.T01:intron | 50.0% | |
| ACCATTGTTCAGGGCTCTCC+GGG | + | Chr3:100807666-100807685 | MsG0380017804.01.T01:intron | 55.0% | |
| ACGCCTGGTATCAGTGATCC+TGG | + | Chr3:100807945-100807964 | MsG0380017804.01.T01:CDS | 55.0% | |
| AGTGAGATGGAGTTCGGAGG+TGG | - | Chr3:100807290-100807309 | None:intergenic | 55.0% | |
| ATAAGTGACGCTGGAACGCC+TGG | + | Chr3:100807930-100807949 | MsG0380017804.01.T01:CDS | 55.0% | |
| CACCATTGTTCAGGGCTCTC+CGG | + | Chr3:100807665-100807684 | MsG0380017804.01.T01:intron | 55.0% | |
| CATCAGCGGAGTTCAACACC+CGG | - | Chr3:100807687-100807706 | None:intergenic | 55.0% | |
| CCCCAGCTTCACCAATCTTG+AGG | - | Chr3:100809323-100809342 | None:intergenic | 55.0% | |
| CTGAGTGAGATGGAGTTCGG+AGG | - | Chr3:100807293-100807312 | None:intergenic | 55.0% | |
| GCAGTGGAAAACGCCATCCA+GGG | - | Chr3:100807193-100807212 | None:intergenic | 55.0% | |
| GCCGCATAACCTCCCAATCA+TGG | - | Chr3:100809140-100809159 | None:intergenic | 55.0% | |
| GGACCTGGGATTGGAACAAC+AGG | - | Chr3:100808095-100808114 | None:intergenic | 55.0% | |
| GGGAACAACTTGTGCTCAGG+AGG | + | Chr3:100807880-100807899 | MsG0380017804.01.T01:CDS | 55.0% | |
| TCGCTCGCAGCATCTCAAAC+CGG | + | Chr3:100807437-100807456 | MsG0380017804.01.T01:five_prime_UTR | 55.0% | |
| ! | TGTTGCTTCGGCGATTACCC+TGG | + | Chr3:100807173-100807192 | MsG0380017804.01.T01:five_prime_UTR | 55.0% |
| !! | GGTATCGGCTCTTTCTGCCT+CGG | + | Chr3:100808124-100808143 | MsG0380017804.01.T01:CDS | 55.0% |
| !! | GTATCGGCTCTTTCTGCCTC+GGG | + | Chr3:100808125-100808144 | MsG0380017804.01.T01:CDS | 55.0% |
| ACCCGGAGAGCCCTGAACAA+TGG | - | Chr3:100807670-100807689 | None:intergenic | 60.0% | |
| GAGTTCGGAGGTGGAGCAGA+AGG | - | Chr3:100807281-100807300 | None:intergenic | 60.0% | |
| GCTTCGGCGATTACCCTGGA+TGG | + | Chr3:100807177-100807196 | MsG0380017804.01.T01:five_prime_UTR | 60.0% | |
| GGCAGTGGAAAACGCCATCC+AGG | - | Chr3:100807194-100807213 | None:intergenic | 60.0% | |
| ! | CGGAAGACACGAGGCACTCT+GGG | + | Chr3:100807716-100807735 | MsG0380017804.01.T01:five_prime_UTR | 60.0% |
| ! | TCGGAAGACACGAGGCACTC+TGG | + | Chr3:100807715-100807734 | MsG0380017804.01.T01:five_prime_UTR | 60.0% |
| ! | CAGTGGAAGAGGTGCGGCAG+TGG | - | Chr3:100807209-100807228 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 100807135 | 100809855 | 100807135 | ID=MsG0380017804.01;Name=MsG0380017804.01 |
| Chr3 | mRNA | 100807135 | 100809855 | 100807135 | ID=MsG0380017804.01.T01;Parent=MsG0380017804.01;Name=MsG0380017804.01.T01;_AED=0.39;_eAED=0.39;_QI=389|1|0.87|1|0.28|0.37|8|0|205 |
| Chr3 | exon | 100807417 | 100807510 | 100807417 | ID=MsG0380017804.01.T01:exon:35845;Parent=MsG0380017804.01.T01 |
| Chr3 | exon | 100807678 | 100807773 | 100807678 | ID=MsG0380017804.01.T01:exon:35846;Parent=MsG0380017804.01.T01 |
| Chr3 | exon | 100807849 | 100807977 | 100807849 | ID=MsG0380017804.01.T01:exon:35847;Parent=MsG0380017804.01.T01 |
| Chr3 | exon | 100808065 | 100808173 | 100808065 | ID=MsG0380017804.01.T01:exon:35848;Parent=MsG0380017804.01.T01 |
| Chr3 | exon | 100808268 | 100808412 | 100808268 | ID=MsG0380017804.01.T01:exon:35849;Parent=MsG0380017804.01.T01 |
| Chr3 | exon | 100808752 | 100808794 | 100808752 | ID=MsG0380017804.01.T01:exon:35850;Parent=MsG0380017804.01.T01 |
| Chr3 | exon | 100809664 | 100809855 | 100809664 | ID=MsG0380017804.01.T01:exon:35851;Parent=MsG0380017804.01.T01 |
| Chr3 | five_prime_UTR | 100807135 | 100807333 | 100807135 | ID=MsG0380017804.01.T01:five_prime_utr;Parent=MsG0380017804.01.T01 |
| Chr3 | five_prime_UTR | 100807417 | 100807510 | 100807417 | ID=MsG0380017804.01.T01:five_prime_utr;Parent=MsG0380017804.01.T01 |
| Chr3 | five_prime_UTR | 100807678 | 100807773 | 100807678 | ID=MsG0380017804.01.T01:five_prime_utr;Parent=MsG0380017804.01.T01 |
| Chr3 | CDS | 100807849 | 100807977 | 100807849 | ID=MsG0380017804.01.T01:cds;Parent=MsG0380017804.01.T01 |
| Chr3 | CDS | 100808065 | 100808173 | 100808065 | ID=MsG0380017804.01.T01:cds;Parent=MsG0380017804.01.T01 |
| Chr3 | CDS | 100808268 | 100808412 | 100808268 | ID=MsG0380017804.01.T01:cds;Parent=MsG0380017804.01.T01 |
| Chr3 | CDS | 100808752 | 100808794 | 100808752 | ID=MsG0380017804.01.T01:cds;Parent=MsG0380017804.01.T01 |
| Chr3 | CDS | 100809664 | 100809855 | 100809664 | ID=MsG0380017804.01.T01:cds;Parent=MsG0380017804.01.T01 |
| Chr3 | mRNA | 100807135 | 100807554 | 100807135 | ID=MsG0380017804.01.T02;Parent=MsG0380017804.01;Name=MsG0380017804.01.T02;_AED=0.46;_eAED=0.53;_QI=37|1|0.5|1|1|1|2|0|99 |
| Chr3 | exon | 100807417 | 100807554 | 100807417 | ID=MsG0380017804.01.T02:exon:35852;Parent=MsG0380017804.01.T02 |
| Chr3 | five_prime_UTR | 100807135 | 100807171 | 100807135 | ID=MsG0380017804.01.T02:five_prime_utr;Parent=MsG0380017804.01.T02 |
| Chr3 | CDS | 100807172 | 100807333 | 100807172 | ID=MsG0380017804.01.T02:cds;Parent=MsG0380017804.01.T02 |
| Chr3 | CDS | 100807417 | 100807554 | 100807417 | ID=MsG0380017804.01.T02:cds;Parent=MsG0380017804.01.T02 |
| Gene Sequence |
| Protein sequence |
