Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022486.01.T01 | XP_003608194.2 | 98.162 | 544 | 10 | 0 | 1 | 544 | 1 | 544 | 0 | 1107 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022486.01.T01 | Q8GWA1 | 69.979 | 483 | 143 | 1 | 61 | 543 | 30 | 510 | 0 | 691 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022486.01.T01 | G7JQS9 | 98.162 | 544 | 10 | 0 | 1 | 544 | 1 | 544 | 0.0 | 1107 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048035.01 | MsG0480022486.01 | 0.844369 | 7.891815e-59 | 1.271194e-55 |
| MsG0180000222.01 | MsG0480022486.01 | 0.827971 | 1.164955e-54 | 1.142328e-51 |
| MsG0180000729.01 | MsG0480022486.01 | 0.804499 | 2.098164e-49 | 1.083466e-46 |
| MsG0180001050.01 | MsG0480022486.01 | 0.815394 | 9.453110e-52 | 6.509678e-49 |
| MsG0180001053.01 | MsG0480022486.01 | 0.820986 | 5.131358e-53 | 4.122943e-50 |
| MsG0180002912.01 | MsG0480022486.01 | 0.829059 | 6.360563e-55 | 6.437343e-52 |
| MsG0180003241.01 | MsG0480022486.01 | 0.805690 | 1.182007e-49 | 6.294377e-47 |
| MsG0180003948.01 | MsG0480022486.01 | 0.821795 | 3.339667e-53 | 2.744545e-50 |
| MsG0180004060.01 | MsG0480022486.01 | 0.802308 | 5.967665e-49 | 2.913741e-46 |
| MsG0180004147.01 | MsG0480022486.01 | 0.805333 | 1.404227e-49 | 7.408909e-47 |
| MsG0180004258.01 | MsG0480022486.01 | 0.802667 | 5.031002e-49 | 2.478827e-46 |
| MsG0180004495.01 | MsG0480022486.01 | 0.841131 | 5.723285e-58 | 8.328955e-55 |
| MsG0180004752.01 | MsG0480022486.01 | 0.845131 | 4.915898e-59 | 8.111284e-56 |
| MsG0180004762.01 | MsG0480022486.01 | 0.804452 | 2.145843e-49 | 1.106774e-46 |
| MsG0180005172.01 | MsG0480022486.01 | 0.880794 | 4.091469e-70 | 2.338608e-66 |
| MsG0180005959.01 | MsG0480022486.01 | 0.823865 | 1.100234e-53 | 9.588871e-51 |
| MsG0180006012.01 | MsG0480022486.01 | 0.822911 | 1.838782e-53 | 1.559938e-50 |
| MsG0180006047.01 | MsG0480022486.01 | 0.818810 | 1.613554e-52 | 1.220245e-49 |
| MsG0180006226.01 | MsG0480022486.01 | -0.800021 | 1.752069e-48 | 8.072158e-46 |
| MsG0280006425.01 | MsG0480022486.01 | 0.814247 | 1.697947e-51 | 1.133431e-48 |
| MsG0280006433.01 | MsG0480022486.01 | 0.822194 | 2.698225e-53 | 2.242654e-50 |
| MsG0280006436.01 | MsG0480022486.01 | 0.828577 | 8.321041e-55 | 8.304422e-52 |
| MsG0280010614.01 | MsG0480022486.01 | 0.813339 | 2.690767e-51 | 1.752473e-48 |
| MsG0280011053.01 | MsG0480022486.01 | 0.846666 | 1.881517e-59 | 3.262738e-56 |
| MsG0280011152.01 | MsG0480022486.01 | 0.842999 | 1.834353e-58 | 2.830106e-55 |
| MsG0280011288.01 | MsG0480022486.01 | 0.803363 | 3.612211e-49 | 1.811635e-46 |
| MsG0280011350.01 | MsG0480022486.01 | 0.810030 | 1.411699e-50 | 8.419398e-48 |
| MsG0280011473.01 | MsG0480022486.01 | 0.821600 | 3.703535e-53 | 3.026615e-50 |
| MsG0380012021.01 | MsG0480022486.01 | 0.813105 | 3.028982e-51 | 1.960052e-48 |
| MsG0380012033.01 | MsG0480022486.01 | 0.820016 | 8.570435e-53 | 6.702856e-50 |
| MsG0380014163.01 | MsG0480022486.01 | 0.836269 | 1.033382e-56 | 1.295845e-53 |
| MsG0480018500.01 | MsG0480022486.01 | 0.810483 | 1.127047e-50 | 6.801712e-48 |
| MsG0480018998.01 | MsG0480022486.01 | 0.833281 | 5.836834e-56 | 6.690204e-53 |
| MsG0480019106.01 | MsG0480022486.01 | 0.826826 | 2.192289e-54 | 2.078852e-51 |
| MsG0480019880.01 | MsG0480022486.01 | 0.832402 | 9.651315e-56 | 1.077606e-52 |
| MsG0480020444.01 | MsG0480022486.01 | 0.838533 | 2.718344e-57 | 3.651484e-54 |
| MsG0480020445.01 | MsG0480022486.01 | 0.829591 | 4.726434e-55 | 4.859103e-52 |
| MsG0480021135.01 | MsG0480022486.01 | 0.816173 | 6.339252e-52 | 4.459518e-49 |
| MsG0480021554.01 | MsG0480022486.01 | 0.805084 | 1.583679e-49 | 8.302564e-47 |
| MsG0480021642.01 | MsG0480022486.01 | 0.809094 | 2.242561e-50 | 1.304641e-47 |
| MsG0480022479.01 | MsG0480022486.01 | 0.837406 | 5.296112e-57 | 6.872162e-54 |
| MsG0480022480.01 | MsG0480022486.01 | 0.834818 | 2.405135e-56 | 2.886788e-53 |
| MsG0480022486.01 | MsG0480022520.01 | 0.870904 | 1.025330e-66 | 4.057556e-63 |
| MsG0480022486.01 | MsG0480022608.01 | 0.821253 | 4.453994e-53 | 3.604862e-50 |
| MsG0480022486.01 | MsG0480022663.01 | 0.843155 | 1.667223e-58 | 2.585064e-55 |
| MsG0480022486.01 | MsG0480023318.01 | 0.868454 | 6.449849e-66 | 2.334294e-62 |
| MsG0480022486.01 | MsG0480023903.01 | 0.850103 | 2.108002e-60 | 4.084204e-57 |
| MsG0480022486.01 | MsG0580024204.01 | 0.813490 | 2.493169e-51 | 1.630524e-48 |
| MsG0480022486.01 | MsG0580024205.01 | 0.806494 | 8.005877e-50 | 4.351565e-47 |
| MsG0480022486.01 | MsG0580024373.01 | 0.820563 | 6.421377e-53 | 5.098394e-50 |
| MsG0480022486.01 | MsG0580024467.01 | 0.814090 | 1.839309e-51 | 1.222529e-48 |
| MsG0480022486.01 | MsG0580024856.01 | 0.801041 | 1.085707e-48 | 5.133589e-46 |
| MsG0480022486.01 | MsG0580024999.01 | 0.807067 | 6.057409e-50 | 3.341448e-47 |
| MsG0480022486.01 | MsG0580025860.01 | 0.812462 | 4.188224e-51 | 2.664818e-48 |
| MsG0480022486.01 | MsG0580027129.01 | 0.830347 | 3.091830e-55 | 3.248978e-52 |
| MsG0480022486.01 | MsG0580027847.01 | 0.841766 | 3.893783e-58 | 5.780075e-55 |
| MsG0480022486.01 | MsG0580028051.01 | 0.810789 | 9.681477e-51 | 5.890866e-48 |
| MsG0480022486.01 | MsG0580029767.01 | 0.802295 | 6.005181e-49 | 2.931014e-46 |
| MsG0480022486.01 | MsG0580029798.01 | 0.834823 | 2.398403e-56 | 2.879196e-53 |
| MsG0480022486.01 | MsG0580029901.01 | 0.838693 | 2.470589e-57 | 3.335003e-54 |
| MsG0480022486.01 | MsG0580029906.01 | 0.825219 | 5.281890e-54 | 4.784611e-51 |
| MsG0480022486.01 | MsG0580029930.01 | 0.847791 | 9.247502e-60 | 1.662209e-56 |
| MsG0480022486.01 | MsG0580029960.01 | 0.801732 | 7.838434e-49 | 3.771127e-46 |
| MsG0480022486.01 | MsG0780037094.01 | 0.804900 | 1.729679e-49 | 9.026320e-47 |
| MsG0480022486.01 | MsG0780037599.01 | 0.825367 | 4.872295e-54 | 4.431897e-51 |
| MsG0480022486.01 | MsG0780038113.01 | 0.804849 | 1.772902e-49 | 9.239278e-47 |
| MsG0480022486.01 | MsG0780038135.01 | 0.824583 | 7.460550e-54 | 6.636537e-51 |
| MsG0480022486.01 | MsG0780038444.01 | 0.838160 | 3.391776e-57 | 4.504123e-54 |
| MsG0480022486.01 | MsG0780038515.01 | 0.800094 | 1.692960e-48 | 7.814409e-46 |
| MsG0480022486.01 | MsG0780038829.01 | 0.808715 | 2.702626e-50 | 1.556415e-47 |
| MsG0480022486.01 | MsG0780039249.01 | 0.830117 | 3.518046e-55 | 3.672291e-52 |
| MsG0480022486.01 | MsG0780039450.01 | 0.804654 | 1.947043e-49 | 1.009508e-46 |
| MsG0480022486.01 | MsG0780039472.01 | 0.802309 | 5.964029e-49 | 2.912054e-46 |
| MsG0480022486.01 | MsG0780040060.01 | 0.833041 | 6.696552e-56 | 7.621352e-53 |
| MsG0480022486.01 | MsG0780040144.01 | 0.854255 | 1.389852e-61 | 3.085801e-58 |
| MsG0480022486.01 | MsG0780040505.01 | 0.808286 | 3.337027e-50 | 1.900486e-47 |
| MsG0480022486.01 | MsG0780041589.01 | 0.809791 | 1.588717e-50 | 9.416006e-48 |
| MsG0480022486.01 | MsG0880041985.01 | 0.816614 | 5.050285e-52 | 3.595734e-49 |
| MsG0480022486.01 | MsG0880042744.01 | 0.811084 | 8.355042e-51 | 5.123887e-48 |
| MsG0480022486.01 | MsG0880042843.01 | 0.859727 | 3.384760e-63 | 9.028658e-60 |
| MsG0480022486.01 | MsG0880042967.01 | 0.862227 | 5.884084e-64 | 1.710655e-60 |
| MsG0480022486.01 | MsG0880043262.01 | 0.835041 | 2.113014e-56 | 2.553261e-53 |
| MsG0480022486.01 | MsG0880043537.01 | 0.806949 | 6.415969e-50 | 3.528423e-47 |
| MsG0480022486.01 | MsG0880043715.01 | 0.808980 | 2.372379e-50 | 1.375906e-47 |
| MsG0480022486.01 | MsG0880044669.01 | 0.818818 | 1.606937e-52 | 1.215522e-49 |
| MsG0480022486.01 | MsG0880045099.01 | 0.837544 | 4.883441e-57 | 6.364029e-54 |
| MsG0480022486.01 | MsG0880045861.01 | 0.833827 | 4.263168e-56 | 4.967689e-53 |
| MsG0480022486.01 | MsG0880046251.01 | -0.800878 | 1.172075e-48 | 5.519066e-46 |
| MsG0480022486.01 | MsG0880046329.01 | 0.801956 | 7.047739e-49 | 3.410142e-46 |
| MsG0480022486.01 | MsG0880046467.01 | 0.874354 | 7.213417e-68 | 3.236756e-64 |
| MsG0480022486.01 | MsG0880046586.01 | 0.854685 | 1.043845e-61 | 2.350413e-58 |
| MsG0480022486.01 | MsG0880046642.01 | 0.859082 | 5.289172e-63 | 1.379729e-59 |
| MsG0480022486.01 | MsG0880046753.01 | 0.841150 | 5.658876e-58 | 8.240126e-55 |
| MsG0480022486.01 | MsG0880046779.01 | 0.803461 | 3.448022e-49 | 1.733731e-46 |
| MsG0480022486.01 | MsG0880047497.01 | 0.811624 | 6.380210e-51 | 3.968626e-48 |
| MsG0380015181.01 | MsG0480022486.01 | 0.800328 | 1.517338e-48 | 7.045713e-46 |
| MsG0380015931.01 | MsG0480022486.01 | 0.831160 | 1.953899e-55 | 2.102835e-52 |
| MsG0380016427.01 | MsG0480022486.01 | 0.826154 | 3.170028e-54 | 2.948934e-51 |
| MsG0380016640.01 | MsG0480022486.01 | 0.817078 | 3.972742e-52 | 2.864770e-49 |
| MsG0380016705.01 | MsG0480022486.01 | 0.810664 | 1.030010e-50 | 6.246567e-48 |
| MsG0380017158.01 | MsG0480022486.01 | 0.827210 | 1.774117e-54 | 1.701437e-51 |
| MsG0380017940.01 | MsG0480022486.01 | 0.838807 | 2.308443e-57 | 3.126929e-54 |
| MsG0280006586.01 | MsG0480022486.01 | 0.862337 | 5.441925e-64 | 1.588030e-60 |
| MsG0280007351.01 | MsG0480022486.01 | 0.811390 | 7.172540e-51 | 4.434095e-48 |
| MsG0280007481.01 | MsG0480022486.01 | 0.837433 | 5.214012e-57 | 6.771680e-54 |
| MsG0280008220.01 | MsG0480022486.01 | 0.803778 | 2.962834e-49 | 1.501967e-46 |
| MsG0280008590.01 | MsG0480022486.01 | 0.812993 | 3.205175e-51 | 2.067986e-48 |
| MsG0280008856.01 | MsG0480022486.01 | 0.819700 | 1.011877e-52 | 7.843977e-50 |
| MsG0280009610.01 | MsG0480022486.01 | 0.835655 | 1.478525e-56 | 1.819782e-53 |
| MsG0280010459.01 | MsG0480022486.01 | 0.853919 | 1.737751e-61 | 3.815095e-58 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0480022486.01 | MsG0480022509.01 | PPI |
| MsG0880047539.01 | MsG0480022486.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022486.01.T01 | MTR_4g090580 | 98.162 | 544 | 10 | 0 | 1 | 544 | 1 | 544 | 0.0 | 1107 |
| MsG0480022486.01.T01 | MTR_5g071250 | 75.885 | 452 | 109 | 0 | 92 | 543 | 50 | 501 | 0.0 | 723 |
| MsG0480022486.01.T01 | MTR_3g464380 | 68.750 | 496 | 149 | 3 | 54 | 543 | 9 | 504 | 0.0 | 687 |
| MsG0480022486.01.T01 | MTR_5g071250 | 75.291 | 344 | 85 | 0 | 92 | 435 | 50 | 393 | 0.0 | 541 |
| MsG0480022486.01.T01 | MTR_4g091240 | 38.611 | 360 | 200 | 9 | 105 | 449 | 51 | 404 | 6.22e-72 | 240 |
| MsG0480022486.01.T01 | MTR_4g091240 | 34.167 | 120 | 70 | 3 | 428 | 543 | 464 | 578 | 3.50e-12 | 69.3 |
| MsG0480022486.01.T01 | MTR_2g011730 | 39.595 | 346 | 193 | 8 | 105 | 440 | 51 | 390 | 1.38e-71 | 239 |
| MsG0480022486.01.T01 | MTR_2g011730 | 36.667 | 120 | 67 | 3 | 428 | 543 | 464 | 578 | 3.02e-14 | 75.9 |
| MsG0480022486.01.T01 | MTR_4g045997 | 36.719 | 384 | 214 | 10 | 81 | 449 | 37 | 406 | 2.92e-67 | 227 |
| MsG0480022486.01.T01 | MTR_4g045997 | 36.579 | 380 | 220 | 9 | 81 | 449 | 37 | 406 | 4.81e-67 | 227 |
| MsG0480022486.01.T01 | MTR_4g045997 | 36.667 | 120 | 67 | 3 | 428 | 543 | 463 | 577 | 2.92e-15 | 79.0 |
| MsG0480022486.01.T01 | MTR_4g045993 | 35.150 | 367 | 200 | 10 | 105 | 455 | 44 | 388 | 2.48e-64 | 220 |
| MsG0480022486.01.T01 | MTR_4g045993 | 35.000 | 120 | 69 | 3 | 428 | 543 | 455 | 569 | 9.80e-13 | 71.2 |
| MsG0480022486.01.T01 | MTR_4g091240 | 35.644 | 303 | 176 | 8 | 162 | 449 | 2 | 300 | 1.59e-51 | 183 |
| MsG0480022486.01.T01 | MTR_4g091240 | 34.167 | 120 | 70 | 3 | 428 | 543 | 360 | 474 | 2.53e-12 | 69.7 |
| MsG0480022486.01.T01 | MTR_0931s0010 | 29.176 | 425 | 262 | 12 | 122 | 543 | 254 | 642 | 7.79e-38 | 149 |
| MsG0480022486.01.T01 | MTR_8g094730 | 24.086 | 465 | 280 | 16 | 105 | 532 | 84 | 512 | 1.96e-13 | 73.2 |
| MsG0480022486.01.T01 | MTR_8g094730 | 24.086 | 465 | 280 | 16 | 105 | 532 | 84 | 512 | 2.00e-13 | 73.2 |
| MsG0480022486.01.T01 | MTR_8g094730 | 24.576 | 354 | 226 | 11 | 198 | 532 | 64 | 395 | 7.56e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480022486.01.T01 | AT1G07180 | 69.979 | 483 | 143 | 1 | 61 | 543 | 30 | 510 | 0.0 | 691 |
| MsG0480022486.01.T01 | AT2G29990 | 72.848 | 453 | 123 | 0 | 91 | 543 | 56 | 508 | 0.0 | 688 |
| MsG0480022486.01.T01 | AT4G21490 | 35.765 | 425 | 226 | 11 | 46 | 455 | 3 | 395 | 3.93e-66 | 225 |
| MsG0480022486.01.T01 | AT4G21490 | 32.231 | 121 | 73 | 3 | 427 | 543 | 465 | 580 | 1.29e-11 | 67.8 |
| MsG0480022486.01.T01 | AT4G21490 | 35.765 | 425 | 225 | 11 | 46 | 455 | 3 | 394 | 6.96e-66 | 224 |
| MsG0480022486.01.T01 | AT4G21490 | 32.231 | 121 | 73 | 3 | 427 | 543 | 464 | 579 | 1.28e-11 | 67.8 |
| MsG0480022486.01.T01 | AT4G28220 | 38.576 | 337 | 188 | 9 | 109 | 434 | 52 | 380 | 1.28e-65 | 222 |
| MsG0480022486.01.T01 | AT4G28220 | 38.576 | 337 | 188 | 9 | 109 | 434 | 52 | 380 | 3.20e-65 | 222 |
| MsG0480022486.01.T01 | AT4G28220 | 36.667 | 120 | 67 | 3 | 428 | 543 | 457 | 571 | 2.87e-13 | 72.8 |
| MsG0480022486.01.T01 | AT4G05020 | 41.745 | 321 | 175 | 7 | 105 | 417 | 57 | 373 | 1.45e-63 | 218 |
| MsG0480022486.01.T01 | AT4G05020 | 32.500 | 120 | 72 | 3 | 428 | 543 | 468 | 582 | 3.10e-11 | 66.6 |
| MsG0480022486.01.T01 | AT4G05020 | 41.745 | 321 | 175 | 7 | 105 | 417 | 57 | 373 | 3.12e-63 | 218 |
| MsG0480022486.01.T01 | AT2G20800 | 36.193 | 373 | 200 | 8 | 103 | 461 | 60 | 408 | 8.92e-57 | 200 |
| MsG0480022486.01.T01 | AT2G20800 | 37.500 | 120 | 66 | 3 | 428 | 543 | 468 | 582 | 1.50e-14 | 77.0 |
| MsG0480022486.01.T01 | AT5G08740 | 24.861 | 539 | 302 | 22 | 33 | 530 | 20 | 496 | 1.58e-19 | 92.4 |
Find 130 sgRNAs with CRISPR-Local
Find 191 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTAGAGTTGTTCAACAAAAT+TGG | 0.171502 | 4:-73155446 | MsG0480022486.01.T01:CDS |
| GTTGTTCTGTTCCTTAATTC+TGG | 0.179951 | 4:+73157490 | None:intergenic |
| TCTATAACTCTTTGTGTGTT+AGG | 0.192700 | 4:+73157419 | None:intergenic |
| GCTGCTTGTCGGTTTCTTAA+AGG | 0.225722 | 4:-73157293 | MsG0480022486.01.T01:CDS |
| CATCACTCAAAACTATCTTT+TGG | 0.254195 | 4:+73156123 | None:intergenic |
| AGAAGATCAGGTGTTGCTTT+TGG | 0.283784 | 4:-73157608 | MsG0480022486.01.T01:CDS |
| CCCTTGATACCAAAAGTTAA+AGG | 0.285822 | 4:+73156816 | None:intergenic |
| TTTCAGAAAGCATCAGATTA+AGG | 0.287447 | 4:+73156727 | None:intergenic |
| TAGATCAACAAGTGCCTTAT+AGG | 0.296028 | 4:+73155328 | None:intergenic |
| GTGTTGGTACCCTTGAATTC+AGG | 0.309821 | 4:-73157190 | MsG0480022486.01.T01:CDS |
| GGAGCTGAGCCTTTAACTTT+TGG | 0.313907 | 4:-73156825 | MsG0480022486.01.T01:CDS |
| TTCCTTATGGTCTCTTGGTT+TGG | 0.321151 | 4:-73156091 | MsG0480022486.01.T01:CDS |
| GGTCTCTTGGTTTGGTCCAC+AGG | 0.327590 | 4:-73156083 | MsG0480022486.01.T01:CDS |
| TTCGTATATTTCCAGAATTA+AGG | 0.335626 | 4:-73157501 | MsG0480022486.01.T01:CDS |
| CTGCTTGTCGGTTTCTTAAA+GGG | 0.336052 | 4:-73157292 | MsG0480022486.01.T01:CDS |
| TGTATCATGCACAAGAAATA+AGG | 0.343406 | 4:-73156761 | MsG0480022486.01.T01:CDS |
| GCAAAGGGATTGTCACTTGC+TGG | 0.349729 | 4:-73155150 | MsG0480022486.01.T01:CDS |
| TAGAGTTGTTCAACAAAATT+GGG | 0.356038 | 4:-73155445 | MsG0480022486.01.T01:CDS |
| ACAATTTGTGTATAAACATA+TGG | 0.358161 | 4:-73155372 | MsG0480022486.01.T01:CDS |
| CTGCTGCATTGTGTAGTTAT+TGG | 0.365839 | 4:-73156551 | MsG0480022486.01.T01:CDS |
| CTATAACTCTTTGTGTGTTA+GGG | 0.367616 | 4:+73157420 | None:intergenic |
| TGTCATATGCAACTTTGAAT+TGG | 0.368204 | 4:+73156865 | None:intergenic |
| GGCATCAGTAGGTGCCTATA+AGG | 0.371076 | 4:-73155342 | MsG0480022486.01.T01:CDS |
| ATTCTGGAAATATACGAAAA+TGG | 0.382739 | 4:+73157506 | None:intergenic |
| TTCTTTCTAGCTTCCTGCAC+TGG | 0.393614 | 4:-73157107 | MsG0480022486.01.T01:CDS |
| TGAAGTTCCTTATGGTCTCT+TGG | 0.393992 | 4:-73156096 | MsG0480022486.01.T01:CDS |
| GTCTGGAGTTTGTCTTATGC+GGG | 0.399394 | 4:-73156168 | MsG0480022486.01.T01:CDS |
| ATGGGAAGGTAAGGAGCCTT+TGG | 0.400415 | 4:+73157538 | None:intergenic |
| GTGTGCTGAGCTGGAGGAAT+AGG | 0.406321 | 4:-73155086 | MsG0480022486.01.T01:CDS |
| GTACCGGTTGGGCTGCTTGT+CGG | 0.407943 | 4:-73157304 | MsG0480022486.01.T01:CDS |
| ATCTTACACGTGTGCTGAGC+TGG | 0.418415 | 4:-73155095 | MsG0480022486.01.T01:CDS |
| TTTGCACTTGGGGATTGTGC+TGG | 0.420564 | 4:-73155860 | MsG0480022486.01.T01:CDS |
| TTGGTTTGGTCCACAGGAGT+TGG | 0.429676 | 4:-73156077 | MsG0480022486.01.T01:CDS |
| TCCTTACCTTCCCATGTAGA+TGG | 0.433038 | 4:-73157530 | MsG0480022486.01.T01:CDS |
| TGATACAGAATTGGTGTTGA+TGG | 0.434223 | 4:-73155914 | MsG0480022486.01.T01:intron |
| CTGAATCTTCCAAGCTCTCC+AGG | 0.437706 | 4:-73156032 | MsG0480022486.01.T01:CDS |
| GATGGAACTGAAGTTCCTTA+TGG | 0.446289 | 4:-73156104 | MsG0480022486.01.T01:CDS |
| AACAAAATTGGGAAACAGAA+TGG | 0.446795 | 4:-73155434 | MsG0480022486.01.T01:CDS |
| TACCTTCCACCTGGAGAGCT+TGG | 0.449786 | 4:+73156023 | None:intergenic |
| CAGCAACAGACCTGAATTCA+AGG | 0.450864 | 4:+73157180 | None:intergenic |
| AGTTCCTGTTATTCCCCTCT+TGG | 0.451235 | 4:+73157457 | None:intergenic |
| TCTAGTCCTGCATATCTTGT+CGG | 0.452195 | 4:+73157368 | None:intergenic |
| AGAGTGGTTGTTCTCGGTAC+CGG | 0.453887 | 4:-73157320 | MsG0480022486.01.T01:CDS |
| ACGAAAATGGTCCATCTACA+TGG | 0.454099 | 4:+73157519 | None:intergenic |
| GGTTGTTCTCGGTACCGGTT+GGG | 0.456139 | 4:-73157315 | MsG0480022486.01.T01:CDS |
| AGCTAGAAAGAAGTATGAGT+TGG | 0.457476 | 4:+73157118 | None:intergenic |
| GTGGAAGATGTCTTTGCACT+TGG | 0.463159 | 4:-73155872 | MsG0480022486.01.T01:CDS |
| GCATCCTGTATTCTGCCAAC+AGG | 0.464813 | 4:+73157155 | None:intergenic |
| GTTATTGGAGGTGGTCCTAC+AGG | 0.464952 | 4:-73156536 | MsG0480022486.01.T01:CDS |
| TGAGCTAAAGCTGGAAGCAC+TGG | 0.467552 | 4:+73155815 | None:intergenic |
| CATATCACCAAGGAATCATA+TGG | 0.470079 | 4:-73157240 | MsG0480022486.01.T01:CDS |
| AAACCGACAAGCAGCCCAAC+CGG | 0.471084 | 4:+73157301 | None:intergenic |
| AGAAGCAACCTGAGAAGATC+AGG | 0.472613 | 4:-73157620 | MsG0480022486.01.T01:CDS |
| TGGAAGATGTCTTTGCACTT+GGG | 0.473440 | 4:-73155871 | MsG0480022486.01.T01:CDS |
| GTGAAAACCATATGATTCCT+TGG | 0.479965 | 4:+73157233 | None:intergenic |
| AGTGCTTCCAGCTTTAGCTC+AGG | 0.480412 | 4:-73155813 | MsG0480022486.01.T01:intron |
| AAGCAACACCTGATCTTCTC+AGG | 0.480533 | 4:+73157612 | None:intergenic |
| TCTGCAGATGGCATCACACT+TGG | 0.481006 | 4:-73155398 | MsG0480022486.01.T01:CDS |
| GACAAGCTTGTAATTGCAGC+TGG | 0.484313 | 4:-73156846 | MsG0480022486.01.T01:CDS |
| TAACACACAAAGAGTTATAG+AGG | 0.487725 | 4:-73157417 | MsG0480022486.01.T01:CDS |
| AAGCCTAGAGTGGTTGTTCT+CGG | 0.488864 | 4:-73157326 | MsG0480022486.01.T01:CDS |
| GACCAAACCAAGAGACCATA+AGG | 0.496146 | 4:+73156089 | None:intergenic |
| TATGCAACTTTGAATTGGTA+AGG | 0.497896 | 4:+73156870 | None:intergenic |
| TGGTTGTTCTCGGTACCGGT+TGG | 0.498770 | 4:-73157316 | MsG0480022486.01.T01:CDS |
| CAATTTGTGTATAAACATAT+GGG | 0.504254 | 4:-73155371 | MsG0480022486.01.T01:CDS |
| GTTTGTGTCAACTCCAGTGC+AGG | 0.507620 | 4:+73157094 | None:intergenic |
| TCTTATGCGGGGTGTGGTGA+AGG | 0.508837 | 4:-73156156 | MsG0480022486.01.T01:CDS |
| CTGCATTGTGTAGTTATTGG+AGG | 0.508933 | 4:-73156548 | MsG0480022486.01.T01:CDS |
| AGGCTAACCTGAGCTAAAGC+TGG | 0.509934 | 4:+73155806 | None:intergenic |
| GCTAGAAAGAAGTATGAGTT+GGG | 0.516821 | 4:+73157119 | None:intergenic |
| CCTACAGGAGTGGAATTTAG+TGG | 0.520988 | 4:-73156521 | MsG0480022486.01.T01:CDS |
| CTCTTTAGATAATCCACCAT+TGG | 0.522845 | 4:+73156893 | None:intergenic |
| GGAAGATGTCTTTGCACTTG+GGG | 0.527209 | 4:-73155870 | MsG0480022486.01.T01:CDS |
| TCCATCTACATGGGAAGGTA+AGG | 0.529367 | 4:+73157529 | None:intergenic |
| CATTCATGTCACACTCATTG+AGG | 0.529894 | 4:-73156438 | MsG0480022486.01.T01:intron |
| ATACTTTCATCCTTTGACGT+TGG | 0.533948 | 4:-73156313 | MsG0480022486.01.T01:CDS |
| CATTGTGTAGTTATTGGAGG+TGG | 0.534574 | 4:-73156545 | MsG0480022486.01.T01:CDS |
| AGTCTGGAGTTTGTCTTATG+CGG | 0.535341 | 4:-73156169 | MsG0480022486.01.T01:CDS |
| CTGTCGAAGGCCAACGTCAA+AGG | 0.536614 | 4:+73156303 | None:intergenic |
| TGGAAGTAATGTACATGAGA+AGG | 0.538179 | 4:-73157588 | MsG0480022486.01.T01:CDS |
| TTTGTGTGTTAGGGAGCTGA+TGG | 0.540218 | 4:+73157429 | None:intergenic |
| TCTTTGGCAGAGACAACAGC+AGG | 0.541549 | 4:-73155029 | MsG0480022486.01.T01:CDS |
| CCACTAAATTCCACTCCTGT+AGG | 0.546000 | 4:+73156521 | None:intergenic |
| TGAGCCTGTTGGCAGAATAC+AGG | 0.549031 | 4:-73157159 | MsG0480022486.01.T01:CDS |
| GGACTAGAGGCAACAAAACC+AGG | 0.554285 | 4:-73157353 | MsG0480022486.01.T01:CDS |
| GGCAGAGACAACAGCAGGAT+AGG | 0.554909 | 4:-73155024 | MsG0480022486.01.T01:CDS |
| AGGTCTGTTGCTGAGCCTGT+TGG | 0.556198 | 4:-73157170 | MsG0480022486.01.T01:CDS |
| GTCTCTGCCAAAGACAAAAG+TGG | 0.556692 | 4:+73155038 | None:intergenic |
| GATGATCCGACAAGATATGC+AGG | 0.562686 | 4:-73157374 | MsG0480022486.01.T01:CDS |
| TCTTGTGTTATAGGATGCAA+AGG | 0.568860 | 4:-73155166 | MsG0480022486.01.T01:intron |
| ACAGAATTGGTGTTGATGGA+TGG | 0.570983 | 4:-73155910 | MsG0480022486.01.T01:intron |
| GTACCGAGAACAACCACTCT+AGG | 0.573776 | 4:+73157323 | None:intergenic |
| GGAAAGGCTTTGTCTGCAGA+TGG | 0.574116 | 4:-73155410 | MsG0480022486.01.T01:CDS |
| AATGGTCCATCTACATGGGA+AGG | 0.577054 | 4:+73157524 | None:intergenic |
| TTGTTGGCTTCAACATGTGT+TGG | 0.577991 | 4:-73157206 | MsG0480022486.01.T01:CDS |
| CTGATGCTTTCTGAAAATCC+AGG | 0.580189 | 4:-73156720 | MsG0480022486.01.T01:intron |
| TGCGAGGCAGTTACCAATGG+TGG | 0.582363 | 4:-73156906 | MsG0480022486.01.T01:CDS |
| GAGAGAACATTTACATCCAA+AGG | 0.583362 | 4:-73157554 | MsG0480022486.01.T01:CDS |
| GGCTTCACATACCTTCCACC+TGG | 0.586382 | 4:+73156014 | None:intergenic |
| TTCCAAGCTCTCCAGGTGGA+AGG | 0.587295 | 4:-73156025 | MsG0480022486.01.T01:intron |
| AGTTTGTCTTATGCGGGGTG+TGG | 0.589261 | 4:-73156162 | MsG0480022486.01.T01:CDS |
| TGTTGATCTACGACAATCCA+AGG | 0.595615 | 4:-73155315 | MsG0480022486.01.T01:intron |
| TACTGCGAGGCAGTTACCAA+TGG | 0.597374 | 4:-73156909 | MsG0480022486.01.T01:CDS |
| TGGGAAACAGAATGGAGGAA+AGG | 0.603382 | 4:-73155426 | MsG0480022486.01.T01:CDS |
| ATGGGGAGCATGGCATCAGT+AGG | 0.604143 | 4:-73155353 | MsG0480022486.01.T01:CDS |
| GTATAAACATATGGGGAGCA+TGG | 0.604718 | 4:-73155363 | MsG0480022486.01.T01:CDS |
| CTTGTGTTATAGGATGCAAA+GGG | 0.609232 | 4:-73155165 | MsG0480022486.01.T01:intron |
| CTATAACAATGGCATTAGCA+AGG | 0.610697 | 4:-73157649 | None:intergenic |
| CTCAGAGGGACCAACTCCTG+TGG | 0.615481 | 4:+73156067 | None:intergenic |
| CGAAAATGGTCCATCTACAT+GGG | 0.615536 | 4:+73157520 | None:intergenic |
| TATGCGGGGTGTGGTGAAGG+AGG | 0.616063 | 4:-73156153 | MsG0480022486.01.T01:CDS |
| GACAAGATATGCAGGACTAG+AGG | 0.619013 | 4:-73157366 | MsG0480022486.01.T01:CDS |
| TGGAGGTGGTCCTACAGGAG+TGG | 0.621881 | 4:-73156531 | MsG0480022486.01.T01:CDS |
| ATGGATGCGTGTTCCGTCCG+TGG | 0.623066 | 4:-73155891 | MsG0480022486.01.T01:CDS |
| AATACAGGATGCACTAGCAA+AGG | 0.629069 | 4:-73157144 | MsG0480022486.01.T01:CDS |
| GCTTCGTTGCATACTGTCGA+AGG | 0.629576 | 4:+73156290 | None:intergenic |
| AAGTGCAAAGACATCTTCCA+CGG | 0.631516 | 4:+73155874 | None:intergenic |
| GCAAAGACATCTTCCACGGA+CGG | 0.636642 | 4:+73155878 | None:intergenic |
| TTACACGTGTGCTGAGCTGG+AGG | 0.642106 | 4:-73155092 | MsG0480022486.01.T01:CDS |
| TCTGGAGTTTGTCTTATGCG+GGG | 0.644473 | 4:-73156167 | MsG0480022486.01.T01:CDS |
| AGCAACAGACCTGAATTCAA+GGG | 0.646467 | 4:+73157181 | None:intergenic |
| ACCAGGTGAAAAGCCTAGAG+TGG | 0.649954 | 4:-73157336 | MsG0480022486.01.T01:CDS |
| TGACAGGTTGCTGAAAGACA+AGG | 0.650294 | 4:-73155479 | MsG0480022486.01.T01:intron |
| ACACATGTTGAAGCCAACAA+AGG | 0.657554 | 4:+73157209 | None:intergenic |
| AAAATTGGGAAACAGAATGG+AGG | 0.666719 | 4:-73155431 | MsG0480022486.01.T01:CDS |
| AATTTGTGTATAAACATATG+GGG | 0.676076 | 4:-73155370 | MsG0480022486.01.T01:CDS |
| TGCAACGAAGCACTTAACAA+AGG | 0.676652 | 4:-73156278 | MsG0480022486.01.T01:intron |
| AATCTTCCAAGCTCTCCAGG+TGG | 0.690106 | 4:-73156029 | MsG0480022486.01.T01:CDS |
| ATGTCAACAGGTCTACTGCG+AGG | 0.733020 | 4:-73156922 | MsG0480022486.01.T01:intron |
| ATGTTGTGTGCATATCACCA+AGG | 0.767641 | 4:-73157250 | MsG0480022486.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACATTTTAAATTTTAATATC+TGG | + | Chr4:73156671-73156690 | None:intergenic | 10.0% |
| !!! | ATTTGTTATAATAATTATGC+AGG | - | Chr4:73156004-73156023 | MsG0480022486.01.T01:intron | 15.0% |
| !! | AAAGACAATATAGATAATGT+CGG | + | Chr4:73156950-73156969 | None:intergenic | 20.0% |
| !! | AATGTAAAAAATTCCAATAG+AGG | - | Chr4:73156976-73156995 | MsG0480022486.01.T01:intron | 20.0% |
| !! | AATTATGAAAAGTTAAACAG+TGG | + | Chr4:73156317-73156336 | None:intergenic | 20.0% |
| !! | AATTTGTGTATAAACATATG+GGG | - | Chr4:73157291-73157310 | MsG0480022486.01.T01:CDS | 20.0% |
| !! | ACAATTTGTGTATAAACATA+TGG | - | Chr4:73157289-73157308 | MsG0480022486.01.T01:CDS | 20.0% |
| !! | ATGTAAAAAATTCCAATAGA+GGG | - | Chr4:73156977-73156996 | MsG0480022486.01.T01:intron | 20.0% |
| !! | CAATTTGTGTATAAACATAT+GGG | - | Chr4:73157290-73157309 | MsG0480022486.01.T01:CDS | 20.0% |
| !!! | AAAATGTTTTTCATTATGAC+AGG | - | Chr4:73156062-73156081 | MsG0480022486.01.T01:CDS | 20.0% |
| !!! | AGTATAGTTTTTCTAAAAGA+AGG | + | Chr4:73155620-73155639 | None:intergenic | 20.0% |
| !!! | CTGTTTAACTTTTCATAATT+AGG | - | Chr4:73156317-73156336 | MsG0480022486.01.T01:CDS | 20.0% |
| !!! | GTATAGTTTTTCTAAAAGAA+GGG | + | Chr4:73155619-73155638 | None:intergenic | 20.0% |
| !!! | TCTATTGGAATTTTTTACAT+TGG | + | Chr4:73156977-73156996 | None:intergenic | 20.0% |
| ! | AAATTAGCAAACTCAAAAGA+CGG | - | Chr4:73157446-73157465 | MsG0480022486.01.T01:CDS | 25.0% |
| ! | ACAAAACATCATAGACAATA+AGG | + | Chr4:73156878-73156897 | None:intergenic | 25.0% |
| ! | ATTAATATGCATTACTTGAC+AGG | - | Chr4:73157006-73157025 | MsG0480022486.01.T01:intron | 25.0% |
| ! | CAAAATGTATCTTGTGTTAT+AGG | - | Chr4:73157486-73157505 | MsG0480022486.01.T01:CDS | 25.0% |
| ! | GAAAAACTATACTGTTACAA+TGG | - | Chr4:73155627-73155646 | MsG0480022486.01.T01:intron | 25.0% |
| ! | GCTTAAAACTAAACTAAGTA+TGG | + | Chr4:73155981-73156000 | None:intergenic | 25.0% |
| ! | GTTATAATAATTATGCAGGT+GGG | - | Chr4:73156008-73156027 | MsG0480022486.01.T01:intron | 25.0% |
| ! | TAGAGTTGTTCAACAAAATT+GGG | - | Chr4:73157216-73157235 | MsG0480022486.01.T01:CDS | 25.0% |
| ! | TGTTATAATAATTATGCAGG+TGG | - | Chr4:73156007-73156026 | MsG0480022486.01.T01:intron | 25.0% |
| ! | TTCGTATATTTCCAGAATTA+AGG | - | Chr4:73155160-73155179 | MsG0480022486.01.T01:intron | 25.0% |
| ! | TTTGTTGAATGATACAGAAT+TGG | - | Chr4:73156738-73156757 | MsG0480022486.01.T01:CDS | 25.0% |
| !! | ATCACTCAAAACTATCTTTT+GGG | + | Chr4:73156540-73156559 | None:intergenic | 25.0% |
| !! | ATTCAATTTTTGTATCAGTC+TGG | - | Chr4:73156476-73156495 | MsG0480022486.01.T01:CDS | 25.0% |
| !! | ATTCTGGAAATATACGAAAA+TGG | + | Chr4:73155158-73155177 | None:intergenic | 25.0% |
| !!! | TGTCATTATTTTTTTGCCAA+AGG | - | Chr4:73156031-73156050 | MsG0480022486.01.T01:CDS | 25.0% |
| AACAAAATTGGGAAACAGAA+TGG | - | Chr4:73157227-73157246 | MsG0480022486.01.T01:CDS | 30.0% | |
| ATTAATACAGTACCCTCTAT+TGG | + | Chr4:73156992-73157011 | None:intergenic | 30.0% | |
| CTAATGTCTAATTTACACTG+TGG | - | Chr4:73157403-73157422 | MsG0480022486.01.T01:CDS | 30.0% | |
| CTATAACTCTTTGTGTGTTA+GGG | + | Chr4:73155244-73155263 | None:intergenic | 30.0% | |
| GAAACTTTCACATTATACCT+TGG | + | Chr4:73157366-73157385 | None:intergenic | 30.0% | |
| GACATGTAATCATTGAAGAT+TGG | + | Chr4:73156439-73156458 | None:intergenic | 30.0% | |
| GTAGAGTTGTTCAACAAAAT+TGG | - | Chr4:73157215-73157234 | MsG0480022486.01.T01:CDS | 30.0% | |
| TAACACACAAAGAGTTATAG+AGG | - | Chr4:73155244-73155263 | MsG0480022486.01.T01:intron | 30.0% | |
| TATGCAACTTTGAATTGGTA+AGG | + | Chr4:73155794-73155813 | None:intergenic | 30.0% | |
| TCTATAACTCTTTGTGTGTT+AGG | + | Chr4:73155245-73155264 | None:intergenic | 30.0% | |
| TGTATCATGCACAAGAAATA+AGG | - | Chr4:73155900-73155919 | MsG0480022486.01.T01:CDS | 30.0% | |
| TGTCATATGCAACTTTGAAT+TGG | + | Chr4:73155799-73155818 | None:intergenic | 30.0% | |
| ! | AACATGAAATTTTCCAAGAG+GGG | - | Chr4:73155191-73155210 | MsG0480022486.01.T01:intron | 30.0% |
| ! | ACAACATGAAATTTTCCAAG+AGG | - | Chr4:73155189-73155208 | MsG0480022486.01.T01:intron | 30.0% |
| ! | CAACATGAAATTTTCCAAGA+GGG | - | Chr4:73155190-73155209 | MsG0480022486.01.T01:intron | 30.0% |
| ! | CAATTTTACTTCATGTCAAC+AGG | - | Chr4:73155727-73155746 | MsG0480022486.01.T01:intron | 30.0% |
| ! | CATCACTCAAAACTATCTTT+TGG | + | Chr4:73156541-73156560 | None:intergenic | 30.0% |
| ! | TCACTCAAAACTATCTTTTG+GGG | + | Chr4:73156539-73156558 | None:intergenic | 30.0% |
| ! | TGATGTTTTGTCAGTACATA+TGG | - | Chr4:73156887-73156906 | MsG0480022486.01.T01:CDS | 30.0% |
| ! | TTTTGTTGAACAACTCTACA+AGG | + | Chr4:73157214-73157233 | None:intergenic | 30.0% |
| !! | CCTTTAACTTTTGGTATCAA+GGG | - | Chr4:73155845-73155864 | MsG0480022486.01.T01:CDS | 30.0% |
| !! | TTTCAGAAAGCATCAGATTA+AGG | + | Chr4:73155937-73155956 | None:intergenic | 30.0% |
| !!! | AGTTTTTTGACAAACTCAGA+GGG | + | Chr4:73156611-73156630 | None:intergenic | 30.0% |
| !!! | CAAAAGATAGTTTTGAGTGA+TGG | - | Chr4:73156539-73156558 | MsG0480022486.01.T01:CDS | 30.0% |
| AAAATTGGGAAACAGAATGG+AGG | - | Chr4:73157230-73157249 | MsG0480022486.01.T01:CDS | 35.0% | |
| ATACGCGATCTAAACACAAA+AGG | + | Chr4:73156413-73156432 | None:intergenic | 35.0% | |
| ATACTTTCATCCTTTGACGT+TGG | - | Chr4:73156348-73156367 | MsG0480022486.01.T01:intron | 35.0% | |
| ATGCATAGTACTACAGAAGT+AGG | - | Chr4:73157061-73157080 | MsG0480022486.01.T01:intron | 35.0% | |
| CATATCACCAAGGAATCATA+TGG | - | Chr4:73155421-73155440 | MsG0480022486.01.T01:CDS | 35.0% | |
| CCCTTGATACCAAAAGTTAA+AGG | + | Chr4:73155848-73155867 | None:intergenic | 35.0% | |
| CTCTTTAGATAATCCACCAT+TGG | + | Chr4:73155771-73155790 | None:intergenic | 35.0% | |
| CTTGTGTTATAGGATGCAAA+GGG | - | Chr4:73157496-73157515 | MsG0480022486.01.T01:CDS | 35.0% | |
| GAGAGAACATTTACATCCAA+AGG | - | Chr4:73155107-73155126 | MsG0480022486.01.T01:CDS | 35.0% | |
| GTGAAAACCATATGATTCCT+TGG | + | Chr4:73155431-73155450 | None:intergenic | 35.0% | |
| GTTGTTCTGTTCCTTAATTC+TGG | + | Chr4:73155174-73155193 | None:intergenic | 35.0% | |
| TAGATCAACAAGTGCCTTAT+AGG | + | Chr4:73157336-73157355 | None:intergenic | 35.0% | |
| TCTTGTGTTATAGGATGCAA+AGG | - | Chr4:73157495-73157514 | MsG0480022486.01.T01:CDS | 35.0% | |
| TGGAAGTAATGTACATGAGA+AGG | - | Chr4:73155073-73155092 | MsG0480022486.01.T01:CDS | 35.0% | |
| ! | AGCTAGAAAGAAGTATGAGT+TGG | + | Chr4:73155546-73155565 | None:intergenic | 35.0% |
| ! | GCTAGAAAGAAGTATGAGTT+GGG | + | Chr4:73155545-73155564 | None:intergenic | 35.0% |
| ! | GTTTTCTTGAACAAACTGGA+AGG | - | Chr4:73156823-73156842 | MsG0480022486.01.T01:CDS | 35.0% |
| ! | TATGGTTTTCACTCCTTTGT+TGG | - | Chr4:73155439-73155458 | MsG0480022486.01.T01:CDS | 35.0% |
| ! | TTTTGGTATCAAGGGAGTAA+AGG | - | Chr4:73155853-73155872 | MsG0480022486.01.T01:CDS | 35.0% |
| !! | AACATTTTCAGCTTAGCCTT+TGG | + | Chr4:73156050-73156069 | None:intergenic | 35.0% |
| !! | ATGTCGGCTTAACTTTGTTT+AGG | + | Chr4:73156934-73156953 | None:intergenic | 35.0% |
| !! | GCCTTTAACTTTTGGTATCA+AGG | - | Chr4:73155844-73155863 | MsG0480022486.01.T01:CDS | 35.0% |
| !! | TGATACAGAATTGGTGTTGA+TGG | - | Chr4:73156747-73156766 | MsG0480022486.01.T01:CDS | 35.0% |
| !!! | CAGTTTTTTGACAAACTCAG+AGG | + | Chr4:73156612-73156631 | None:intergenic | 35.0% |
| AAGTGCAAAGACATCTTCCA+CGG | + | Chr4:73156790-73156809 | None:intergenic | 40.0% | |
| AATACAGGATGCACTAGCAA+AGG | - | Chr4:73155517-73155536 | MsG0480022486.01.T01:intron | 40.0% | |
| ACACATGTTGAAGCCAACAA+AGG | + | Chr4:73155455-73155474 | None:intergenic | 40.0% | |
| ACGAAAATGGTCCATCTACA+TGG | + | Chr4:73155145-73155164 | None:intergenic | 40.0% | |
| AGCAACAGACCTGAATTCAA+GGG | + | Chr4:73155483-73155502 | None:intergenic | 40.0% | |
| ATGTTGTGTGCATATCACCA+AGG | - | Chr4:73155411-73155430 | MsG0480022486.01.T01:CDS | 40.0% | |
| CATTCATGTCACACTCATTG+AGG | - | Chr4:73156223-73156242 | MsG0480022486.01.T01:intron | 40.0% | |
| CATTGTGTAGTTATTGGAGG+TGG | - | Chr4:73156116-73156135 | MsG0480022486.01.T01:CDS | 40.0% | |
| CGAAAATGGTCCATCTACAT+GGG | + | Chr4:73155144-73155163 | None:intergenic | 40.0% | |
| CTGCATTGTGTAGTTATTGG+AGG | - | Chr4:73156113-73156132 | MsG0480022486.01.T01:CDS | 40.0% | |
| CTGCTGCATTGTGTAGTTAT+TGG | - | Chr4:73156110-73156129 | MsG0480022486.01.T01:CDS | 40.0% | |
| GAGTATACTTTCCTATGCAC+TGG | - | Chr4:73157155-73157174 | MsG0480022486.01.T01:CDS | 40.0% | |
| GATGGAACTGAAGTTCCTTA+TGG | - | Chr4:73156557-73156576 | MsG0480022486.01.T01:CDS | 40.0% | |
| GTATAAACATATGGGGAGCA+TGG | - | Chr4:73157298-73157317 | MsG0480022486.01.T01:CDS | 40.0% | |
| TCTAGTCCTGCATATCTTGT+CGG | + | Chr4:73155296-73155315 | None:intergenic | 40.0% | |
| TGAAGTTCCTTATGGTCTCT+TGG | - | Chr4:73156565-73156584 | MsG0480022486.01.T01:CDS | 40.0% | |
| TGGAAGATGTCTTTGCACTT+GGG | - | Chr4:73156790-73156809 | MsG0480022486.01.T01:CDS | 40.0% | |
| TGTTGATCTACGACAATCCA+AGG | - | Chr4:73157346-73157365 | MsG0480022486.01.T01:CDS | 40.0% | |
| TTCCTTATGGTCTCTTGGTT+TGG | - | Chr4:73156570-73156589 | MsG0480022486.01.T01:CDS | 40.0% | |
| ! | AGTCTGGAGTTTGTCTTATG+CGG | - | Chr4:73156492-73156511 | MsG0480022486.01.T01:CDS | 40.0% |
| ! | ATGCTTTCTGAAAATCCAGG+TGG | - | Chr4:73155944-73155963 | MsG0480022486.01.T01:intron | 40.0% |
| ! | CTGATGCTTTCTGAAAATCC+AGG | - | Chr4:73155941-73155960 | MsG0480022486.01.T01:intron | 40.0% |
| ! | GTTTTACGTGGCAGTAAACT+GGG | - | Chr4:73157597-73157616 | MsG0480022486.01.T01:CDS | 40.0% |
| ! | TGCAACGAAGCACTTAACAA+AGG | - | Chr4:73156383-73156402 | MsG0480022486.01.T01:intron | 40.0% |
| ! | TGCTTTCTGAAAATCCAGGT+GGG | - | Chr4:73155945-73155964 | MsG0480022486.01.T01:intron | 40.0% |
| ! | TTTTACGTGGCAGTAAACTG+GGG | - | Chr4:73157598-73157617 | MsG0480022486.01.T01:CDS | 40.0% |
| ! | TTTTCCAAGAGGGGAATAAC+AGG | - | Chr4:73155200-73155219 | MsG0480022486.01.T01:intron | 40.0% |
| !! | ACAGAATTGGTGTTGATGGA+TGG | - | Chr4:73156751-73156770 | MsG0480022486.01.T01:CDS | 40.0% |
| !! | CTGCTTGTCGGTTTCTTAAA+GGG | - | Chr4:73155369-73155388 | MsG0480022486.01.T01:CDS | 40.0% |
| !! | TTGTTGGCTTCAACATGTGT+TGG | - | Chr4:73155455-73155474 | MsG0480022486.01.T01:CDS | 40.0% |
| !!! | AGAAGATCAGGTGTTGCTTT+TGG | - | Chr4:73155053-73155072 | MsG0480022486.01.T01:CDS | 40.0% |
| !!! | GCTGGTTTTCTTGAACAAAC+TGG | - | Chr4:73156819-73156838 | MsG0480022486.01.T01:CDS | 40.0% |
| AAGCAACACCTGATCTTCTC+AGG | + | Chr4:73155052-73155071 | None:intergenic | 45.0% | |
| AAGCCTAGAGTGGTTGTTCT+CGG | - | Chr4:73155335-73155354 | MsG0480022486.01.T01:CDS | 45.0% | |
| AATGGTCCATCTACATGGGA+AGG | + | Chr4:73155140-73155159 | None:intergenic | 45.0% | |
| AGAAGCAACCTGAGAAGATC+AGG | - | Chr4:73155041-73155060 | MsG0480022486.01.T01:CDS | 45.0% | |
| AGTTCCTGTTATTCCCCTCT+TGG | + | Chr4:73155207-73155226 | None:intergenic | 45.0% | |
| ATGGATATGAAACACCCACC+TGG | + | Chr4:73155962-73155981 | None:intergenic | 45.0% | |
| CAGCAACAGACCTGAATTCA+AGG | + | Chr4:73155484-73155503 | None:intergenic | 45.0% | |
| CCACTAAATTCCACTCCTGT+AGG | + | Chr4:73156143-73156162 | None:intergenic | 45.0% | |
| CCTACAGGAGTGGAATTTAG+TGG | - | Chr4:73156140-73156159 | MsG0480022486.01.T01:CDS | 45.0% | |
| GACAAGATATGCAGGACTAG+AGG | - | Chr4:73155295-73155314 | MsG0480022486.01.T01:intron | 45.0% | |
| GACAAGCTTGTAATTGCAGC+TGG | - | Chr4:73155815-73155834 | MsG0480022486.01.T01:CDS | 45.0% | |
| GACCAAACCAAGAGACCATA+AGG | + | Chr4:73156575-73156594 | None:intergenic | 45.0% | |
| GATGATCCGACAAGATATGC+AGG | - | Chr4:73155287-73155306 | MsG0480022486.01.T01:intron | 45.0% | |
| GGAAGATGTCTTTGCACTTG+GGG | - | Chr4:73156791-73156810 | MsG0480022486.01.T01:CDS | 45.0% | |
| GTCTCTGCCAAAGACAAAAG+TGG | + | Chr4:73157626-73157645 | None:intergenic | 45.0% | |
| GTGGAAGATGTCTTTGCACT+TGG | - | Chr4:73156789-73156808 | MsG0480022486.01.T01:CDS | 45.0% | |
| TCCATCTACATGGGAAGGTA+AGG | + | Chr4:73155135-73155154 | None:intergenic | 45.0% | |
| TCCTTACCTTCCCATGTAGA+TGG | - | Chr4:73155131-73155150 | MsG0480022486.01.T01:CDS | 45.0% | |
| TGACAGGTTGCTGAAAGACA+AGG | - | Chr4:73157182-73157201 | MsG0480022486.01.T01:CDS | 45.0% | |
| TGGGAAACAGAATGGAGGAA+AGG | - | Chr4:73157235-73157254 | MsG0480022486.01.T01:CDS | 45.0% | |
| TTTGTGTGTTAGGGAGCTGA+TGG | + | Chr4:73155235-73155254 | None:intergenic | 45.0% | |
| ! | CTGGAGGAATAGGTTTTACG+TGG | - | Chr4:73157585-73157604 | MsG0480022486.01.T01:CDS | 45.0% |
| ! | GGTTTTACGTGGCAGTAAAC+TGG | - | Chr4:73157596-73157615 | MsG0480022486.01.T01:CDS | 45.0% |
| ! | GTCTGGAGTTTGTCTTATGC+GGG | - | Chr4:73156493-73156512 | MsG0480022486.01.T01:CDS | 45.0% |
| ! | GTGTTGGTACCCTTGAATTC+AGG | - | Chr4:73155471-73155490 | MsG0480022486.01.T01:CDS | 45.0% |
| ! | GTTTTGTCAGCTGGCTGATA+TGG | - | Chr4:73157533-73157552 | MsG0480022486.01.T01:CDS | 45.0% |
| ! | TCTGGAGTTTGTCTTATGCG+GGG | - | Chr4:73156494-73156513 | MsG0480022486.01.T01:CDS | 45.0% |
| !! | GCTGCTTGTCGGTTTCTTAA+AGG | - | Chr4:73155368-73155387 | MsG0480022486.01.T01:CDS | 45.0% |
| !! | GGAGCTGAGCCTTTAACTTT+TGG | - | Chr4:73155836-73155855 | MsG0480022486.01.T01:CDS | 45.0% |
| !! | TGGGGAACCACTTTTGTCTT+TGG | - | Chr4:73157616-73157635 | MsG0480022486.01.T01:CDS | 45.0% |
| !! | TTCTTTCTAGCTTCCTGCAC+TGG | - | Chr4:73155554-73155573 | MsG0480022486.01.T01:intron | 45.0% |
| AATCTTCCAAGCTCTCCAGG+TGG | - | Chr4:73156632-73156651 | MsG0480022486.01.T01:intron | 50.0% | |
| ACCAGGTGAAAAGCCTAGAG+TGG | - | Chr4:73155325-73155344 | MsG0480022486.01.T01:CDS | 50.0% | |
| AGAGTGGTTGTTCTCGGTAC+CGG | - | Chr4:73155341-73155360 | MsG0480022486.01.T01:CDS | 50.0% | |
| AGGCTAACCTGAGCTAAAGC+TGG | + | Chr4:73156858-73156877 | None:intergenic | 50.0% | |
| AGTTTGTCTTATGCGGGGTG+TGG | - | Chr4:73156499-73156518 | MsG0480022486.01.T01:CDS | 50.0% | |
| ATCTTACACGTGTGCTGAGC+TGG | - | Chr4:73157566-73157585 | MsG0480022486.01.T01:CDS | 50.0% | |
| ATGGGAAGGTAAGGAGCCTT+TGG | + | Chr4:73155126-73155145 | None:intergenic | 50.0% | |
| ATGTCAACAGGTCTACTGCG+AGG | - | Chr4:73155739-73155758 | MsG0480022486.01.T01:intron | 50.0% | |
| CTGAATCTTCCAAGCTCTCC+AGG | - | Chr4:73156629-73156648 | MsG0480022486.01.T01:intron | 50.0% | |
| GCAAAGACATCTTCCACGGA+CGG | + | Chr4:73156786-73156805 | None:intergenic | 50.0% | |
| GCATCCTGTATTCTGCCAAC+AGG | + | Chr4:73155509-73155528 | None:intergenic | 50.0% | |
| GCTTCGTTGCATACTGTCGA+AGG | + | Chr4:73156374-73156393 | None:intergenic | 50.0% | |
| GGACTAGAGGCAACAAAACC+AGG | - | Chr4:73155308-73155327 | MsG0480022486.01.T01:intron | 50.0% | |
| GGCATCAGTAGGTGCCTATA+AGG | - | Chr4:73157319-73157338 | MsG0480022486.01.T01:CDS | 50.0% | |
| GTACCGAGAACAACCACTCT+AGG | + | Chr4:73155341-73155360 | None:intergenic | 50.0% | |
| GTTATTGGAGGTGGTCCTAC+AGG | - | Chr4:73156125-73156144 | MsG0480022486.01.T01:CDS | 50.0% | |
| GTTTGTGTCAACTCCAGTGC+AGG | + | Chr4:73155570-73155589 | None:intergenic | 50.0% | |
| TACTGCGAGGCAGTTACCAA+TGG | - | Chr4:73155752-73155771 | MsG0480022486.01.T01:intron | 50.0% | |
| TCTGCAGATGGCATCACACT+TGG | - | Chr4:73157263-73157282 | MsG0480022486.01.T01:CDS | 50.0% | |
| TCTTTGGCAGAGACAACAGC+AGG | - | Chr4:73157632-73157651 | MsG0480022486.01.T01:CDS | 50.0% | |
| TGAGCCTGTTGGCAGAATAC+AGG | - | Chr4:73155502-73155521 | MsG0480022486.01.T01:intron | 50.0% | |
| TTTGCACTTGGGGATTGTGC+TGG | - | Chr4:73156801-73156820 | MsG0480022486.01.T01:CDS | 50.0% | |
| ! | ACCACTCTAGGCTTTTCACC+TGG | + | Chr4:73155329-73155348 | None:intergenic | 50.0% |
| ! | AGTGCTTCCAGCTTTAGCTC+AGG | - | Chr4:73156848-73156867 | MsG0480022486.01.T01:CDS | 50.0% |
| ! | GCAAAGGGATTGTCACTTGC+TGG | - | Chr4:73157511-73157530 | MsG0480022486.01.T01:CDS | 50.0% |
| ! | GGAAAGGCTTTGTCTGCAGA+TGG | - | Chr4:73157251-73157270 | MsG0480022486.01.T01:CDS | 50.0% |
| ! | TGAGCTAAAGCTGGAAGCAC+TGG | + | Chr4:73156849-73156868 | None:intergenic | 50.0% |
| !! | TTGGTTTGGTCCACAGGAGT+TGG | - | Chr4:73156584-73156603 | MsG0480022486.01.T01:intron | 50.0% |
| !!! | CACTTGCTGGTTTTGTCAGC+TGG | - | Chr4:73157524-73157543 | MsG0480022486.01.T01:CDS | 50.0% |
| AAACCGACAAGCAGCCCAAC+CGG | + | Chr4:73155363-73155382 | None:intergenic | 55.0% | |
| AGGTCTGTTGCTGAGCCTGT+TGG | - | Chr4:73155491-73155510 | MsG0480022486.01.T01:intron | 55.0% | |
| CCTGTCAGTGACCAGTGCAT+AGG | + | Chr4:73157169-73157188 | None:intergenic | 55.0% | |
| CTGTCGAAGGCCAACGTCAA+AGG | + | Chr4:73156361-73156380 | None:intergenic | 55.0% | |
| GGCAGAGACAACAGCAGGAT+AGG | - | Chr4:73157637-73157656 | MsG0480022486.01.T01:CDS | 55.0% | |
| GGCTTCACATACCTTCCACC+TGG | + | Chr4:73156650-73156669 | None:intergenic | 55.0% | |
| GTGTGCTGAGCTGGAGGAAT+AGG | - | Chr4:73157575-73157594 | MsG0480022486.01.T01:CDS | 55.0% | |
| TACCTTCCACCTGGAGAGCT+TGG | + | Chr4:73156641-73156660 | None:intergenic | 55.0% | |
| TCTTATGCGGGGTGTGGTGA+AGG | - | Chr4:73156505-73156524 | MsG0480022486.01.T01:CDS | 55.0% | |
| TGCGAGGCAGTTACCAATGG+TGG | - | Chr4:73155755-73155774 | MsG0480022486.01.T01:intron | 55.0% | |
| TTACACGTGTGCTGAGCTGG+AGG | - | Chr4:73157569-73157588 | MsG0480022486.01.T01:CDS | 55.0% | |
| TTCCAAGCTCTCCAGGTGGA+AGG | - | Chr4:73156636-73156655 | MsG0480022486.01.T01:intron | 55.0% | |
| ! | ATGGGGAGCATGGCATCAGT+AGG | - | Chr4:73157308-73157327 | MsG0480022486.01.T01:CDS | 55.0% |
| ! | CCTATGCACTGGTCACTGAC+AGG | - | Chr4:73157166-73157185 | MsG0480022486.01.T01:CDS | 55.0% |
| !! | GGTCTCTTGGTTTGGTCCAC+AGG | - | Chr4:73156578-73156597 | MsG0480022486.01.T01:CDS | 55.0% |
| !! | GGTTGTTCTCGGTACCGGTT+GGG | - | Chr4:73155346-73155365 | MsG0480022486.01.T01:CDS | 55.0% |
| !! | TGGTTGTTCTCGGTACCGGT+TGG | - | Chr4:73155345-73155364 | MsG0480022486.01.T01:CDS | 55.0% |
| ATGGATGCGTGTTCCGTCCG+TGG | - | Chr4:73156770-73156789 | MsG0480022486.01.T01:CDS | 60.0% | |
| CTCAGAGGGACCAACTCCTG+TGG | + | Chr4:73156597-73156616 | None:intergenic | 60.0% | |
| TATGCGGGGTGTGGTGAAGG+AGG | - | Chr4:73156508-73156527 | MsG0480022486.01.T01:CDS | 60.0% | |
| TGGAGGTGGTCCTACAGGAG+TGG | - | Chr4:73156130-73156149 | MsG0480022486.01.T01:CDS | 60.0% | |
| !! | GTACCGGTTGGGCTGCTTGT+CGG | - | Chr4:73155357-73155376 | MsG0480022486.01.T01:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 73155020 | 73157663 | 73155020 | ID=MsG0480022486.01;Name=MsG0480022486.01 |
| Chr4 | mRNA | 73155020 | 73157663 | 73155020 | ID=MsG0480022486.01.T01;Parent=MsG0480022486.01;Name=MsG0480022486.01.T01;_AED=0.47;_eAED=0.47;_QI=0|0|0|1|0.85|0.87|8|0|544 |
| Chr4 | exon | 73157085 | 73157663 | 73157085 | ID=MsG0480022486.01.T01:exon:2854;Parent=MsG0480022486.01.T01 |
| Chr4 | exon | 73156721 | 73156934 | 73156721 | ID=MsG0480022486.01.T01:exon:2853;Parent=MsG0480022486.01.T01 |
| Chr4 | exon | 73156439 | 73156599 | 73156439 | ID=MsG0480022486.01.T01:exon:2852;Parent=MsG0480022486.01.T01 |
| Chr4 | exon | 73156279 | 73156344 | 73156279 | ID=MsG0480022486.01.T01:exon:2851;Parent=MsG0480022486.01.T01 |
| Chr4 | exon | 73156026 | 73156189 | 73156026 | ID=MsG0480022486.01.T01:exon:2850;Parent=MsG0480022486.01.T01 |
| Chr4 | exon | 73155814 | 73155928 | 73155814 | ID=MsG0480022486.01.T01:exon:2849;Parent=MsG0480022486.01.T01 |
| Chr4 | exon | 73155316 | 73155495 | 73155316 | ID=MsG0480022486.01.T01:exon:2848;Parent=MsG0480022486.01.T01 |
| Chr4 | exon | 73155020 | 73155175 | 73155020 | ID=MsG0480022486.01.T01:exon:2847;Parent=MsG0480022486.01.T01 |
| Chr4 | CDS | 73157085 | 73157663 | 73157085 | ID=MsG0480022486.01.T01:cds;Parent=MsG0480022486.01.T01 |
| Chr4 | CDS | 73156721 | 73156934 | 73156721 | ID=MsG0480022486.01.T01:cds;Parent=MsG0480022486.01.T01 |
| Chr4 | CDS | 73156439 | 73156599 | 73156439 | ID=MsG0480022486.01.T01:cds;Parent=MsG0480022486.01.T01 |
| Chr4 | CDS | 73156279 | 73156344 | 73156279 | ID=MsG0480022486.01.T01:cds;Parent=MsG0480022486.01.T01 |
| Chr4 | CDS | 73156026 | 73156189 | 73156026 | ID=MsG0480022486.01.T01:cds;Parent=MsG0480022486.01.T01 |
| Chr4 | CDS | 73155814 | 73155928 | 73155814 | ID=MsG0480022486.01.T01:cds;Parent=MsG0480022486.01.T01 |
| Chr4 | CDS | 73155316 | 73155495 | 73155316 | ID=MsG0480022486.01.T01:cds;Parent=MsG0480022486.01.T01 |
| Chr4 | CDS | 73155020 | 73155175 | 73155020 | ID=MsG0480022486.01.T01:cds;Parent=MsG0480022486.01.T01 |
| Gene Sequence |
| Protein sequence |
