Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580029930.01.T01 | XP_004497780.1 | 89.766 | 342 | 35 | 0 | 4 | 345 | 3 | 344 | 0 | 643 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580029930.01.T01 | Q9SLN8 | 62.319 | 345 | 128 | 1 | 1 | 345 | 1 | 343 | 2.25E-161 | 457 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580029930.01.T01 | A0A1S2Y2K2 | 89.766 | 342 | 35 | 0 | 4 | 345 | 3 | 344 | 0.0 | 643 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048035.01 | MsG0580029930.01 | 0.849413 | 3.285125e-60 | 6.222485e-57 |
| MsG0080048302.01 | MsG0580029930.01 | 0.826670 | 2.388905e-54 | 2.255218e-51 |
| MsG0080048345.01 | MsG0580029930.01 | 0.806879 | 6.639893e-50 | 3.644932e-47 |
| MsG0080048348.01 | MsG0580029930.01 | 0.803613 | 3.205805e-49 | 1.618281e-46 |
| MsG0180000019.01 | MsG0580029930.01 | 0.839414 | 1.607357e-57 | 2.218178e-54 |
| MsG0180000222.01 | MsG0580029930.01 | 0.818605 | 1.796796e-52 | 1.351111e-49 |
| MsG0180000337.01 | MsG0580029930.01 | 0.827902 | 1.210304e-54 | 1.184296e-51 |
| MsG0180001050.01 | MsG0580029930.01 | 0.817653 | 2.949560e-52 | 2.160669e-49 |
| MsG0180001053.01 | MsG0580029930.01 | 0.856385 | 3.333350e-62 | 7.942682e-59 |
| MsG0180002912.01 | MsG0580029930.01 | 0.824116 | 9.607440e-54 | 8.432000e-51 |
| MsG0180003241.01 | MsG0580029930.01 | 0.804916 | 1.716825e-49 | 8.962664e-47 |
| MsG0180004110.01 | MsG0580029930.01 | 0.869833 | 2.301607e-66 | 8.760404e-63 |
| MsG0180004186.01 | MsG0580029930.01 | 0.800825 | 1.201930e-48 | 5.651585e-46 |
| MsG0180004300.01 | MsG0580029930.01 | 0.817926 | 2.559896e-52 | 1.889393e-49 |
| MsG0180004562.01 | MsG0580029930.01 | 0.867495 | 1.311909e-65 | 4.589707e-62 |
| MsG0180004752.01 | MsG0580029930.01 | 0.890423 | 9.984611e-74 | 8.389649e-70 |
| MsG0180004867.01 | MsG0580029930.01 | 0.804260 | 2.352359e-49 | 1.207322e-46 |
| MsG0180005357.01 | MsG0580029930.01 | 0.806333 | 8.657887e-50 | 4.686642e-47 |
| MsG0180005996.01 | MsG0580029930.01 | 0.835284 | 1.834816e-56 | 2.233604e-53 |
| MsG0180005997.01 | MsG0580029930.01 | 0.817920 | 2.566727e-52 | 1.894169e-49 |
| MsG0180006012.01 | MsG0580029930.01 | 0.845672 | 3.510250e-59 | 5.894499e-56 |
| MsG0180006047.01 | MsG0580029930.01 | 0.813325 | 2.710523e-51 | 1.764667e-48 |
| MsG0180006226.01 | MsG0580029930.01 | -0.821111 | 4.803339e-53 | 3.872521e-50 |
| MsG0280011041.01 | MsG0580029930.01 | 0.812963 | 3.254686e-51 | 2.098128e-48 |
| MsG0280011042.01 | MsG0580029930.01 | 0.801723 | 7.869711e-49 | 3.785320e-46 |
| MsG0280011053.01 | MsG0580029930.01 | 0.881155 | 3.035239e-70 | 1.758783e-66 |
| MsG0280011152.01 | MsG0580029930.01 | 0.846407 | 2.214324e-59 | 3.807851e-56 |
| MsG0280011288.01 | MsG0580029930.01 | 0.839045 | 2.003315e-57 | 2.733281e-54 |
| MsG0280011350.01 | MsG0580029930.01 | 0.844523 | 7.172483e-59 | 1.161083e-55 |
| MsG0280011473.01 | MsG0580029930.01 | 0.818131 | 2.300839e-52 | 1.707702e-49 |
| MsG0380011613.01 | MsG0580029930.01 | 0.825975 | 3.496037e-54 | 3.235875e-51 |
| MsG0380012607.01 | MsG0580029930.01 | 0.807206 | 5.660751e-50 | 3.134006e-47 |
| MsG0380013100.01 | MsG0580029930.01 | 0.841843 | 3.716466e-58 | 5.530263e-55 |
| MsG0380014006.01 | MsG0580029930.01 | -0.801432 | 9.029595e-49 | 4.311551e-46 |
| MsG0380014920.01 | MsG0580029930.01 | 0.831644 | 1.485029e-55 | 1.621421e-52 |
| MsG0480018500.01 | MsG0580029930.01 | 0.832986 | 6.912704e-56 | 7.854297e-53 |
| MsG0480018904.01 | MsG0580029930.01 | 0.829602 | 4.696828e-55 | 4.830200e-52 |
| MsG0480018998.01 | MsG0580029930.01 | 0.823431 | 1.390280e-53 | 1.196781e-50 |
| MsG0480019038.01 | MsG0580029930.01 | 0.838003 | 3.722886e-57 | 4.921060e-54 |
| MsG0480019106.01 | MsG0580029930.01 | 0.809341 | 1.985309e-50 | 1.162646e-47 |
| MsG0480019295.01 | MsG0580029930.01 | 0.819623 | 1.053791e-52 | 8.150824e-50 |
| MsG0480019726.01 | MsG0580029930.01 | 0.802911 | 4.480487e-49 | 2.221415e-46 |
| MsG0480019880.01 | MsG0580029930.01 | 0.841518 | 4.525985e-58 | 6.667134e-55 |
| MsG0480020444.01 | MsG0580029930.01 | 0.896367 | 3.949218e-76 | 4.258323e-72 |
| MsG0480020445.01 | MsG0580029930.01 | 0.805180 | 1.512082e-49 | 7.946733e-47 |
| MsG0480020554.01 | MsG0580029930.01 | 0.802581 | 5.242966e-49 | 2.577551e-46 |
| MsG0480021298.01 | MsG0580029930.01 | 0.830432 | 2.946582e-55 | 3.103857e-52 |
| MsG0480022125.01 | MsG0580029930.01 | 0.859336 | 4.439250e-63 | 1.168361e-59 |
| MsG0480022274.01 | MsG0580029930.01 | 0.802162 | 6.395711e-49 | 3.110958e-46 |
| MsG0480022479.01 | MsG0580029930.01 | 0.822435 | 2.372712e-53 | 1.985888e-50 |
| MsG0480022486.01 | MsG0580029930.01 | 0.847791 | 9.247502e-60 | 1.662209e-56 |
| MsG0480022507.01 | MsG0580029930.01 | 0.824072 | 9.841921e-54 | 8.626976e-51 |
| MsG0480022508.01 | MsG0580029930.01 | 0.816125 | 6.496595e-52 | 4.564164e-49 |
| MsG0480022607.01 | MsG0580029930.01 | 0.800636 | 1.313354e-48 | 6.146110e-46 |
| MsG0480022736.01 | MsG0580029930.01 | 0.811068 | 8.421456e-51 | 5.162376e-48 |
| MsG0480023318.01 | MsG0580029930.01 | 0.884530 | 1.771962e-71 | 1.173050e-67 |
| MsG0480023417.01 | MsG0580029930.01 | 0.808715 | 2.703203e-50 | 1.556721e-47 |
| MsG0480023947.01 | MsG0580029930.01 | 0.837946 | 3.849075e-57 | 5.078854e-54 |
| MsG0580024154.01 | MsG0580029930.01 | 0.829197 | 5.890713e-55 | 5.987143e-52 |
| MsG0580024373.01 | MsG0580029930.01 | 0.846237 | 2.464026e-59 | 4.213324e-56 |
| MsG0580024407.01 | MsG0580029930.01 | 0.816243 | 6.113355e-52 | 4.308907e-49 |
| MsG0580024871.01 | MsG0580029930.01 | 0.819660 | 1.033576e-52 | 8.003179e-50 |
| MsG0580024999.01 | MsG0580029930.01 | 0.856996 | 2.203832e-62 | 5.358404e-59 |
| MsG0580025876.01 | MsG0580029930.01 | 0.822608 | 2.162281e-53 | 1.818879e-50 |
| MsG0380016427.01 | MsG0580029930.01 | 0.801112 | 1.050030e-48 | 4.973614e-46 |
| MsG0380016598.01 | MsG0580029930.01 | 0.800674 | 1.290365e-48 | 6.044389e-46 |
| MsG0380016640.01 | MsG0580029930.01 | 0.803012 | 4.271566e-49 | 2.123072e-46 |
| MsG0380016644.01 | MsG0580029930.01 | 0.809291 | 2.034208e-50 | 1.189713e-47 |
| MsG0380016926.01 | MsG0580029930.01 | 0.800160 | 1.641694e-48 | 7.590093e-46 |
| MsG0380017101.01 | MsG0580029930.01 | 0.826611 | 2.466495e-54 | 2.324521e-51 |
| MsG0380017158.01 | MsG0580029930.01 | 0.840692 | 7.461217e-58 | 1.071203e-54 |
| MsG0380018026.01 | MsG0580029930.01 | 0.802973 | 4.350313e-49 | 2.160142e-46 |
| MsG0480018333.01 | MsG0580029930.01 | 0.821961 | 3.056196e-53 | 2.523344e-50 |
| MsG0580027129.01 | MsG0580029930.01 | 0.805167 | 1.521148e-49 | 7.991954e-47 |
| MsG0580027227.01 | MsG0580029930.01 | 0.804437 | 2.161013e-49 | 1.114177e-46 |
| MsG0580027733.01 | MsG0580029930.01 | 0.837832 | 4.119077e-57 | 5.416252e-54 |
| MsG0580027808.01 | MsG0580029930.01 | 0.809341 | 1.984726e-50 | 1.162324e-47 |
| MsG0580028051.01 | MsG0580029930.01 | 0.858555 | 7.604298e-63 | 1.948267e-59 |
| MsG0580028355.01 | MsG0580029930.01 | 0.823055 | 1.702140e-53 | 1.449917e-50 |
| MsG0580028416.01 | MsG0580029930.01 | 0.808010 | 3.820123e-50 | 2.159794e-47 |
| MsG0580028758.01 | MsG0580029930.01 | 0.803917 | 2.772765e-49 | 1.410734e-46 |
| MsG0580028999.01 | MsG0580029930.01 | 0.828357 | 9.404262e-55 | 9.325286e-52 |
| MsG0580029583.01 | MsG0580029930.01 | 0.891762 | 2.953732e-74 | 2.624153e-70 |
| MsG0580029798.01 | MsG0580029930.01 | 0.828247 | 9.994459e-55 | 9.878811e-52 |
| MsG0580029901.01 | MsG0580029930.01 | 0.822315 | 2.529833e-53 | 2.110096e-50 |
| MsG0580029906.01 | MsG0580029930.01 | 0.838095 | 3.524661e-57 | 4.671445e-54 |
| MsG0580029930.01 | MsG0680031429.01 | 0.807889 | 4.054211e-50 | 2.284723e-47 |
| MsG0580029930.01 | MsG0680033971.01 | 0.812675 | 3.761781e-51 | 2.406804e-48 |
| MsG0580029930.01 | MsG0680034663.01 | 0.845182 | 4.762251e-59 | 7.870927e-56 |
| MsG0580029930.01 | MsG0680035741.01 | 0.861812 | 7.886239e-64 | 2.259399e-60 |
| MsG0580029930.01 | MsG0680035777.01 | 0.800867 | 1.178468e-48 | 5.547368e-46 |
| MsG0580029930.01 | MsG0780036514.01 | 0.801534 | 8.603413e-49 | 4.118705e-46 |
| MsG0580029930.01 | MsG0780037094.01 | 0.801496 | 8.762949e-49 | 4.191012e-46 |
| MsG0580029930.01 | MsG0780037599.01 | 0.854924 | 8.900198e-62 | 2.019937e-58 |
| MsG0580029930.01 | MsG0780038123.01 | 0.896065 | 5.274240e-76 | 5.613685e-72 |
| MsG0580029930.01 | MsG0780038135.01 | 0.867136 | 1.709743e-65 | 5.904650e-62 |
| MsG0580029930.01 | MsG0780038444.01 | 0.823065 | 1.692577e-53 | 1.442173e-50 |
| MsG0580029930.01 | MsG0780038515.01 | 0.824623 | 7.300689e-54 | 6.502245e-51 |
| MsG0580029930.01 | MsG0780038925.01 | 0.828201 | 1.025673e-54 | 1.012477e-51 |
| MsG0580029930.01 | MsG0780039472.01 | 0.835945 | 1.248465e-56 | 1.549999e-53 |
| MsG0580029930.01 | MsG0780039877.01 | 0.820124 | 8.096397e-53 | 6.351457e-50 |
| MsG0580029930.01 | MsG0780040060.01 | 0.874111 | 8.714442e-68 | 3.874509e-64 |
| MsG0580029930.01 | MsG0780040144.01 | 0.844181 | 8.863408e-59 | 1.419526e-55 |
| MsG0580029930.01 | MsG0780040480.01 | 0.839022 | 2.030850e-57 | 2.768964e-54 |
| MsG0580029930.01 | MsG0780040609.01 | 0.818520 | 1.877877e-52 | 1.408898e-49 |
| MsG0580029930.01 | MsG0780041556.01 | 0.814486 | 1.503166e-51 | 1.009961e-48 |
| MsG0580029930.01 | MsG0780041589.01 | 0.811726 | 6.060069e-51 | 3.779954e-48 |
| MsG0580029930.01 | MsG0880041985.01 | 0.849710 | 2.715826e-60 | 5.193803e-57 |
| MsG0580029930.01 | MsG0880042368.01 | 0.831029 | 2.103807e-55 | 2.255368e-52 |
| MsG0580029930.01 | MsG0880042811.01 | 0.803049 | 4.195273e-49 | 2.087230e-46 |
| MsG0580029930.01 | MsG0880042843.01 | 0.842796 | 2.078159e-58 | 3.186077e-55 |
| MsG0580029930.01 | MsG0880042967.01 | 0.816359 | 5.759962e-52 | 4.072676e-49 |
| MsG0580029930.01 | MsG0880043094.01 | 0.848415 | 6.218141e-60 | 1.140346e-56 |
| MsG0580029930.01 | MsG0880043185.01 | 0.821025 | 5.028703e-53 | 4.044802e-50 |
| MsG0580029930.01 | MsG0880043262.01 | 0.832076 | 1.161725e-55 | 1.284687e-52 |
| MsG0580029930.01 | MsG0880043285.01 | 0.837278 | 5.713701e-57 | 7.384800e-54 |
| MsG0580029930.01 | MsG0880043715.01 | 0.834122 | 3.597620e-56 | 4.228918e-53 |
| MsG0580029930.01 | MsG0880043824.01 | 0.824309 | 8.656156e-54 | 7.638222e-51 |
| MsG0580029930.01 | MsG0880044100.01 | 0.803452 | 3.462409e-49 | 1.740578e-46 |
| MsG0580029930.01 | MsG0880044669.01 | 0.851137 | 1.079251e-60 | 2.163293e-57 |
| MsG0580029930.01 | MsG0880045099.01 | 0.803980 | 2.691077e-49 | 1.371360e-46 |
| MsG0580029930.01 | MsG0880045256.01 | 0.853603 | 2.143089e-61 | 4.656396e-58 |
| MsG0580029930.01 | MsG0880045277.01 | 0.839183 | 1.845735e-57 | 2.528981e-54 |
| MsG0580029930.01 | MsG0880045441.01 | 0.849916 | 2.378653e-60 | 4.580698e-57 |
| MsG0580029930.01 | MsG0880045861.01 | 0.864597 | 1.084383e-64 | 3.423885e-61 |
| MsG0580029930.01 | MsG0880046226.01 | 0.818826 | 1.600155e-52 | 1.210692e-49 |
| MsG0580029930.01 | MsG0880046251.01 | -0.841504 | 4.565258e-58 | 6.722044e-55 |
| MsG0580029930.01 | MsG0880046467.01 | 0.871797 | 5.198563e-67 | 2.124270e-63 |
| MsG0580029930.01 | MsG0880046586.01 | 0.830094 | 3.563463e-55 | 3.717046e-52 |
| MsG0580029930.01 | MsG0880046642.01 | 0.835497 | 1.621683e-56 | 1.986566e-53 |
| MsG0580029930.01 | MsG0880046753.01 | 0.837839 | 4.100582e-57 | 5.393289e-54 |
| MsG0580029930.01 | MsG0880046996.01 | 0.818292 | 2.115770e-52 | 1.577301e-49 |
| MsG0580029930.01 | MsG0880047081.01 | 0.885190 | 1.006728e-71 | 6.843805e-68 |
| MsG0580029930.01 | MsG0880047233.01 | 0.820755 | 5.799874e-53 | 4.629664e-50 |
| MsG0580029930.01 | MsG0880047256.01 | 0.803978 | 2.692989e-49 | 1.372262e-46 |
| MsG0580029930.01 | MsG0880047486.01 | 0.835125 | 2.013033e-56 | 2.438422e-53 |
| MsG0580029930.01 | MsG0880047491.01 | 0.852719 | 3.837670e-61 | 8.092565e-58 |
| MsG0280006974.01 | MsG0580029930.01 | 0.825893 | 3.656452e-54 | 3.376455e-51 |
| MsG0280007052.01 | MsG0580029930.01 | 0.802282 | 6.040874e-49 | 2.947488e-46 |
| MsG0280007272.01 | MsG0580029930.01 | 0.828766 | 7.491092e-55 | 7.516583e-52 |
| MsG0280007369.01 | MsG0580029930.01 | 0.834696 | 2.582112e-56 | 3.087465e-53 |
| MsG0280007391.01 | MsG0580029930.01 | 0.819093 | 1.391564e-52 | 1.060662e-49 |
| MsG0280007751.01 | MsG0580029930.01 | 0.849992 | 2.263798e-60 | 4.369989e-57 |
| MsG0280007759.01 | MsG0580029930.01 | 0.830573 | 2.722219e-55 | 2.879244e-52 |
| MsG0280007760.01 | MsG0580029930.01 | 0.832064 | 1.169747e-55 | 1.293143e-52 |
| MsG0280007840.01 | MsG0580029930.01 | 0.816929 | 4.292286e-52 | 3.082646e-49 |
| MsG0280008856.01 | MsG0580029930.01 | 0.830107 | 3.538116e-55 | 3.692034e-52 |
| MsG0280009394.01 | MsG0580029930.01 | 0.846718 | 1.821879e-59 | 3.164566e-56 |
| MsG0280009717.01 | MsG0580029930.01 | 0.833101 | 6.472037e-56 | 7.379021e-53 |
| MsG0280009838.01 | MsG0580029930.01 | 0.816964 | 4.215548e-52 | 3.030643e-49 |
| MsG0280009858.01 | MsG0580029930.01 | 0.811438 | 7.001229e-51 | 4.333974e-48 |
| MsG0280009899.01 | MsG0580029930.01 | 0.822068 | 2.886629e-53 | 2.390550e-50 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580029930.01.T01 | MTR_8g010030 | 63.265 | 343 | 124 | 2 | 4 | 345 | 3 | 344 | 1.43e-161 | 455 |
| MsG0580029930.01.T01 | MTR_8g009820 | 63.158 | 342 | 125 | 1 | 4 | 345 | 62 | 402 | 7.03e-159 | 451 |
| MsG0580029930.01.T01 | MTR_8g009980 | 60.174 | 344 | 133 | 2 | 4 | 345 | 3 | 344 | 9.19e-154 | 436 |
| MsG0580029930.01.T01 | MTR_8g009840 | 61.310 | 336 | 128 | 2 | 4 | 339 | 3 | 336 | 2.59e-152 | 439 |
| MsG0580029930.01.T01 | MTR_4g082970 | 60.000 | 345 | 134 | 2 | 3 | 345 | 8 | 350 | 9.51e-152 | 431 |
| MsG0580029930.01.T01 | MTR_8g009830 | 60.177 | 339 | 133 | 2 | 7 | 345 | 6 | 342 | 1.23e-151 | 430 |
| MsG0580029930.01.T01 | MTR_8g010020 | 59.357 | 342 | 107 | 2 | 4 | 345 | 3 | 312 | 1.56e-145 | 413 |
| MsG0580029930.01.T01 | MTR_7g406860 | 60.350 | 343 | 134 | 2 | 4 | 345 | 5 | 346 | 7.78e-145 | 413 |
| MsG0580029930.01.T01 | MTR_8g010000 | 55.977 | 343 | 124 | 3 | 4 | 345 | 3 | 319 | 5.04e-137 | 392 |
| MsG0580029930.01.T01 | MTR_0011s0280 | 44.380 | 347 | 186 | 4 | 4 | 345 | 2 | 346 | 9.12e-102 | 303 |
| MsG0580029930.01.T01 | MTR_8g007325 | 63.594 | 217 | 78 | 1 | 4 | 220 | 3 | 218 | 2.32e-94 | 280 |
| MsG0580029930.01.T01 | MTR_5g095030 | 91.270 | 126 | 11 | 0 | 218 | 343 | 11 | 136 | 8.91e-79 | 237 |
| MsG0580029930.01.T01 | MTR_2g088190 | 39.943 | 348 | 202 | 6 | 1 | 342 | 1 | 347 | 7.06e-77 | 240 |
| MsG0580029930.01.T01 | MTR_2g088220 | 40.549 | 328 | 185 | 7 | 1 | 320 | 1 | 326 | 5.57e-73 | 230 |
| MsG0580029930.01.T01 | MTR_2g088200 | 38.838 | 327 | 193 | 5 | 23 | 342 | 22 | 348 | 6.18e-67 | 214 |
| MsG0580029930.01.T01 | MTR_5g095020 | 96.774 | 62 | 1 | 1 | 25 | 86 | 1 | 61 | 5.05e-34 | 120 |
| MsG0580029930.01.T01 | MTR_4g086400 | 37.321 | 209 | 123 | 5 | 140 | 342 | 276 | 482 | 1.03e-29 | 119 |
| MsG0580029930.01.T01 | MTR_4g086400 | 37.321 | 209 | 123 | 5 | 140 | 342 | 416 | 622 | 1.49e-29 | 119 |
| MsG0580029930.01.T01 | MTR_4g086410 | 36.842 | 209 | 124 | 5 | 140 | 342 | 416 | 622 | 6.92e-29 | 117 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580029930.01.T01 | AT1G26320 | 63.768 | 345 | 119 | 3 | 5 | 345 | 9 | 351 | 4.77e-158 | 447 |
| MsG0580029930.01.T01 | AT1G26320 | 62.899 | 345 | 117 | 4 | 5 | 345 | 9 | 346 | 3.99e-154 | 437 |
| MsG0580029930.01.T01 | AT5G16990 | 60.756 | 344 | 126 | 4 | 7 | 345 | 4 | 343 | 4.49e-153 | 434 |
| MsG0580029930.01.T01 | AT5G17000 | 60.870 | 345 | 125 | 4 | 7 | 345 | 5 | 345 | 8.98e-153 | 433 |
| MsG0580029930.01.T01 | AT5G16970 | 60.870 | 345 | 125 | 4 | 7 | 345 | 5 | 345 | 1.23e-152 | 433 |
| MsG0580029930.01.T01 | AT3G03080 | 61.047 | 344 | 129 | 2 | 5 | 345 | 9 | 350 | 2.33e-152 | 432 |
| MsG0580029930.01.T01 | AT5G37940 | 59.827 | 346 | 128 | 4 | 7 | 345 | 12 | 353 | 1.75e-149 | 425 |
| MsG0580029930.01.T01 | AT5G37980 | 59.302 | 344 | 133 | 3 | 7 | 345 | 12 | 353 | 1.61e-148 | 422 |
| MsG0580029930.01.T01 | AT5G16960 | 59.357 | 342 | 133 | 3 | 6 | 343 | 5 | 344 | 2.21e-146 | 417 |
| MsG0580029930.01.T01 | AT5G16960 | 59.357 | 342 | 133 | 3 | 6 | 343 | 5 | 344 | 2.21e-146 | 417 |
| MsG0580029930.01.T01 | AT5G38000 | 58.140 | 344 | 133 | 4 | 7 | 343 | 12 | 351 | 1.90e-144 | 412 |
| MsG0580029930.01.T01 | AT5G38000 | 57.018 | 342 | 135 | 5 | 7 | 341 | 12 | 348 | 6.79e-139 | 398 |
| MsG0580029930.01.T01 | AT3G59845 | 54.755 | 347 | 152 | 3 | 1 | 343 | 1 | 346 | 5.71e-133 | 383 |
| MsG0580029930.01.T01 | AT1G65560 | 56.091 | 353 | 144 | 6 | 1 | 345 | 1 | 350 | 1.87e-130 | 377 |
| MsG0580029930.01.T01 | AT5G38000 | 54.360 | 344 | 127 | 5 | 7 | 343 | 12 | 332 | 7.56e-129 | 372 |
| MsG0580029930.01.T01 | AT5G16980 | 50.147 | 339 | 130 | 3 | 7 | 345 | 6 | 305 | 7.31e-113 | 330 |
| MsG0580029930.01.T01 | AT1G65560 | 59.559 | 272 | 104 | 3 | 79 | 345 | 4 | 274 | 2.54e-110 | 323 |
| MsG0580029930.01.T01 | AT5G16980 | 65.652 | 230 | 79 | 0 | 116 | 345 | 10 | 239 | 5.21e-109 | 318 |
| MsG0580029930.01.T01 | AT5G16980 | 65.652 | 230 | 79 | 0 | 116 | 345 | 10 | 239 | 5.21e-109 | 318 |
| MsG0580029930.01.T01 | AT3G59845 | 60.408 | 245 | 95 | 2 | 100 | 343 | 1 | 244 | 1.20e-104 | 307 |
| MsG0580029930.01.T01 | AT5G17000 | 61.086 | 221 | 76 | 4 | 7 | 221 | 5 | 221 | 5.63e-92 | 275 |
| MsG0580029930.01.T01 | AT1G49670 | 34.928 | 209 | 128 | 5 | 140 | 342 | 412 | 618 | 2.17e-25 | 107 |
| MsG0580029930.01.T01 | AT1G49670 | 34.975 | 203 | 124 | 5 | 146 | 342 | 441 | 641 | 5.82e-24 | 103 |
| MsG0580029930.01.T01 | AT5G37960 | 45.783 | 83 | 44 | 1 | 264 | 345 | 25 | 107 | 5.82e-15 | 70.5 |
Find 71 sgRNAs with CRISPR-Local
Find 140 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGACATAATCTCCTTTCTT+AGG | 0.186749 | 5:-104141148 | None:intergenic |
| TCTCAGCCAATTGTTGGATA+TGG | 0.212277 | 5:+104140828 | MsG0580029930.01.T01:intron |
| TTGTTCCTCCTTGTAATTAA+AGG | 0.220154 | 5:-104141405 | None:intergenic |
| GTCTTTATCTCTTCAGCATT+TGG | 0.257772 | 5:+104141166 | MsG0580029930.01.T01:CDS |
| AAATACATGTCTGTTTGTTT+TGG | 0.259959 | 5:-104140010 | None:intergenic |
| ATCAAAATGAAATGTAATTA+AGG | 0.269362 | 5:-104142194 | None:intergenic |
| GTACCTCTTTCCTATTATAC+TGG | 0.275241 | 5:+104140981 | MsG0580029930.01.T01:CDS |
| GCTTCTTCTGAAGCATCTTT+AGG | 0.302866 | 5:-104140061 | None:intergenic |
| ACCAAGTAATCCAGTATAAT+AGG | 0.317896 | 5:-104140991 | None:intergenic |
| CAAACATCTACACAACAATT+AGG | 0.335865 | 5:+104139862 | None:intergenic |
| TTTAGGAAGTTGTAAACTAA+TGG | 0.368693 | 5:-104140044 | None:intergenic |
| CATTGTGTACTTACTGAATC+TGG | 0.374679 | 5:-104140175 | None:intergenic |
| AAGTATATGTCTATTCCTTC+AGG | 0.376687 | 5:-104141811 | None:intergenic |
| TCCTATTATACTGGATTACT+TGG | 0.387026 | 5:+104140990 | MsG0580029930.01.T01:CDS |
| TGTTTCTCTCAGCCAATTGT+TGG | 0.398931 | 5:+104140822 | MsG0580029930.01.T01:intron |
| AAGTGCTGGAAGTAAATATA+AGG | 0.404456 | 5:+104141246 | MsG0580029930.01.T01:CDS |
| CATACTCCATATCCAACAAT+TGG | 0.417973 | 5:-104140834 | None:intergenic |
| CTAGCTTCAGACTACATAAC+TGG | 0.420922 | 5:+104139983 | MsG0580029930.01.T01:CDS |
| ACTTCTTCAATGTTCCATCT+AGG | 0.430843 | 5:-104141430 | None:intergenic |
| GGTGCAGTTGGTCAACTTGT+TGG | 0.433984 | 5:+104141187 | MsG0580029930.01.T01:CDS |
| TCTTCAGCATTTGGTGCAGT+TGG | 0.434713 | 5:+104141175 | MsG0580029930.01.T01:CDS |
| GACATATACTTTGACAATGT+TGG | 0.436284 | 5:+104141823 | MsG0580029930.01.T01:CDS |
| AGACATAATCTCCTTTCTTA+GGG | 0.438933 | 5:-104141147 | None:intergenic |
| TGTTATGTTGTTGGAAGTGC+TGG | 0.440024 | 5:+104141232 | MsG0580029930.01.T01:CDS |
| GATGCTGTACTCTTCCCATT+TGG | 0.449214 | 5:-104140916 | None:intergenic |
| GGCCTCATCAAACCCAAACT+TGG | 0.459549 | 5:-104141384 | None:intergenic |
| CGCGGTCGAATTGTGGTGGC+TGG | 0.464338 | 5:+104141886 | MsG0580029930.01.T01:CDS |
| TTTGATGAGGCTATCAGTCT+TGG | 0.465767 | 5:-104140943 | None:intergenic |
| TGGTCAACTAGCAAAATTGA+TGG | 0.468450 | 5:+104141207 | MsG0580029930.01.T01:CDS |
| TGGTTTGGGGAGTCACCAAA+TGG | 0.470534 | 5:+104140901 | MsG0580029930.01.T01:CDS |
| TCATTGTAACTACAATTTCA+AGG | 0.472028 | 5:+104142227 | MsG0580029930.01.T01:three_prime_UTR |
| ATTATATATGTAGGTATGCC+TGG | 0.474482 | 5:+104141088 | MsG0580029930.01.T01:intron |
| TTGATGGGATGTTATGTTGT+TGG | 0.475372 | 5:+104141223 | MsG0580029930.01.T01:CDS |
| ACTTACTGAATCTGGAGAAA+AGG | 0.479229 | 5:-104140167 | None:intergenic |
| AAGGAGGAACAAGACCTAGA+TGG | 0.479388 | 5:+104141416 | MsG0580029930.01.T01:CDS |
| ATCTTCCCTTCCCTAACATA+AGG | 0.481674 | 5:-104142048 | None:intergenic |
| CCTGGTATGACTGCTTATGC+AGG | 0.485648 | 5:+104141106 | MsG0580029930.01.T01:CDS |
| CGCGGCGTCTCATGTTAAGA+AGG | 0.487677 | 5:-104141867 | None:intergenic |
| ATGAGAGGAACCAAAAGAAC+AGG | 0.495779 | 5:+104140124 | MsG0580029930.01.T01:CDS |
| AACATTGCTTCTAATGCAGC+TGG | 0.496232 | 5:-104142111 | None:intergenic |
| AGAACAAGTGATCAACAAAC+AGG | 0.499152 | 5:+104139958 | MsG0580029930.01.T01:CDS |
| TGATGAGGCCTTTAATTACA+AGG | 0.501845 | 5:+104141397 | MsG0580029930.01.T01:CDS |
| ATTAAGATCATTTGACAAAG+AGG | 0.502197 | 5:+104139916 | MsG0580029930.01.T01:five_prime_UTR |
| TATGTTGAAGATATAGCTAA+AGG | 0.505580 | 5:+104142075 | MsG0580029930.01.T01:CDS |
| CATTGTAACTACAATTTCAA+GGG | 0.510205 | 5:+104142228 | MsG0580029930.01.T01:three_prime_UTR |
| GAAGTTGGTGTCCCTAAGAA+AGG | 0.513037 | 5:+104141136 | MsG0580029930.01.T01:CDS |
| ATGTTGAAGATATAGCTAAA+GGG | 0.517100 | 5:+104142076 | MsG0580029930.01.T01:CDS |
| TATGCAGGTTTCTATGAAGT+TGG | 0.517868 | 5:+104141121 | MsG0580029930.01.T01:CDS |
| TGCTTCAGAAGAAGCTGTGT+TGG | 0.523213 | 5:+104140069 | MsG0580029930.01.T01:CDS |
| ATGTTCACAGGCAAAAGTGC+TGG | 0.538532 | 5:+104142129 | MsG0580029930.01.T01:CDS |
| CCTGCATAAGCAGTCATACC+AGG | 0.538967 | 5:-104141106 | None:intergenic |
| AAGTTGTAAACTAATGGTAG+AGG | 0.558112 | 5:-104140038 | None:intergenic |
| AATCCAGTATAATAGGAAAG+AGG | 0.565113 | 5:-104140984 | None:intergenic |
| GTTGATAGGTACTTTCCTGA+AGG | 0.565387 | 5:+104141796 | MsG0580029930.01.T01:intron |
| GAGACGCCGCGGTCGAATTG+TGG | 0.565480 | 5:+104141879 | MsG0580029930.01.T01:CDS |
| GACCAAGTTTGGGTTTGATG+AGG | 0.568115 | 5:+104141382 | MsG0580029930.01.T01:CDS |
| TCTTGTGATCCTTACATGAG+AGG | 0.570442 | 5:+104140109 | MsG0580029930.01.T01:CDS |
| ATATACTTTGACAATGTTGG+TGG | 0.576525 | 5:+104141826 | MsG0580029930.01.T01:CDS |
| ATATGGAGTATGCAAAGTGT+TGG | 0.578801 | 5:+104140845 | MsG0580029930.01.T01:CDS |
| CTGGAGAAAAGGAATAAAAG+AGG | 0.580653 | 5:-104140156 | None:intergenic |
| GCATTAGAAGCAATGTTCAC+AGG | 0.584098 | 5:+104142117 | MsG0580029930.01.T01:CDS |
| GGTTTGGGGAGTCACCAAAT+GGG | 0.589430 | 5:+104140902 | MsG0580029930.01.T01:CDS |
| TAGCTAAAGGGATTGAGAGT+GGG | 0.592897 | 5:+104142088 | MsG0580029930.01.T01:CDS |
| GCGGCGTCTCATGTTAAGAA+GGG | 0.635176 | 5:-104141866 | None:intergenic |
| TATGAACTTGATGAACCTCA+AGG | 0.637072 | 5:+104141922 | MsG0580029930.01.T01:CDS |
| ATAGCTAAAGGGATTGAGAG+TGG | 0.645427 | 5:+104142087 | MsG0580029930.01.T01:CDS |
| GGTCAACTAGCAAAATTGAT+GGG | 0.646505 | 5:+104141208 | MsG0580029930.01.T01:CDS |
| ACGCCGCGGTCGAATTGTGG+TGG | 0.652143 | 5:+104141882 | MsG0580029930.01.T01:CDS |
| TGAGGCCTTTAATTACAAGG+AGG | 0.704335 | 5:+104141400 | MsG0580029930.01.T01:CDS |
| CTTCTTAACATGAGACGCCG+CGG | 0.740483 | 5:+104141868 | MsG0580029930.01.T01:CDS |
| CAGCCACCACAATTCGACCG+CGG | 0.745630 | 5:-104141885 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAACAAAACAATATCAATT+AGG | - | Chr5:104141332-104141351 | None:intergenic | 15.0% |
| !! | AGTATACATTTAAATTAAAG+AGG | + | Chr5:104140331-104140350 | MsG0580029930.01.T01:intron | 15.0% |
| !! | ATATGATTAAGTCTATTATA+AGG | + | Chr5:104140749-104140768 | MsG0580029930.01.T01:intron | 15.0% |
| !! | ATCAAAATGAAATGTAATTA+AGG | - | Chr5:104142197-104142216 | None:intergenic | 15.0% |
| !! | TAATGAGTTATTATATATGT+AGG | + | Chr5:104141079-104141098 | MsG0580029930.01.T01:intron | 15.0% |
| !!! | ACTTTTTTCTTTGTAAAATA+TGG | - | Chr5:104140400-104140419 | None:intergenic | 15.0% |
| !!! | ATATTTTACAAAGAAAAAAG+TGG | + | Chr5:104140399-104140418 | MsG0580029930.01.T01:intron | 15.0% |
| !!! | CTTTAATTTAAATGTATACT+TGG | - | Chr5:104140331-104140350 | None:intergenic | 15.0% |
| !! | AAACATCCAAATTTCAAAAA+AGG | + | Chr5:104140873-104140892 | MsG0580029930.01.T01:CDS | 20.0% |
| !! | ACTTGTATACAAAAATTAAC+AGG | + | Chr5:104141493-104141512 | MsG0580029930.01.T01:intron | 20.0% |
| !! | CTTGTATACAAAAATTAACA+GGG | + | Chr5:104141494-104141513 | MsG0580029930.01.T01:intron | 20.0% |
| !! | TAGAATACAATACTTACTTT+AGG | + | Chr5:104141602-104141621 | MsG0580029930.01.T01:intron | 20.0% |
| !! | TTTAGTATTCATTACAAAAG+AGG | - | Chr5:104141745-104141764 | None:intergenic | 20.0% |
| !!! | TGTTTTCATGTCAATAAATA+AGG | + | Chr5:104141346-104141365 | MsG0580029930.01.T01:intron | 20.0% |
| ! | AAAATTGTGTCCAAAAACTT+TGG | - | Chr5:104142027-104142046 | None:intergenic | 25.0% |
| ! | AAATTTCAAAAAAGGAGACT+TGG | + | Chr5:104140881-104140900 | MsG0580029930.01.T01:CDS | 25.0% |
| ! | AGAGGAAAAATAAGCAAAAA+TGG | + | Chr5:104139934-104139953 | MsG0580029930.01.T01:exon | 25.0% |
| ! | ATGTTGAAGATATAGCTAAA+GGG | + | Chr5:104142076-104142095 | MsG0580029930.01.T01:CDS | 25.0% |
| ! | ATTAAGATCATTTGACAAAG+AGG | + | Chr5:104139916-104139935 | MsG0580029930.01.T01:five_prime_UTR | 25.0% |
| ! | ATTCAAATCGGTTGTAAAAA+TGG | - | Chr5:104140589-104140608 | None:intergenic | 25.0% |
| ! | CAAATAAGTTGTCATCAAAT+TGG | - | Chr5:104140373-104140392 | None:intergenic | 25.0% |
| ! | CATTGTAACTACAATTTCAA+GGG | + | Chr5:104142228-104142247 | MsG0580029930.01.T01:three_prime_UTR | 25.0% |
| ! | GAGGAAAAATAAGCAAAAAT+GGG | + | Chr5:104139935-104139954 | MsG0580029930.01.T01:exon | 25.0% |
| ! | TACAAAGAAAAAAGTGGTAT+TGG | + | Chr5:104140405-104140424 | MsG0580029930.01.T01:intron | 25.0% |
| ! | TATGTTGAAGATATAGCTAA+AGG | + | Chr5:104142075-104142094 | MsG0580029930.01.T01:CDS | 25.0% |
| ! | TCATTGTAACTACAATTTCA+AGG | + | Chr5:104142227-104142246 | MsG0580029930.01.T01:three_prime_UTR | 25.0% |
| ! | TTGAGCGATAAAATTCAAAT+CGG | - | Chr5:104140601-104140620 | None:intergenic | 25.0% |
| ! | TTTAGGAAGTTGTAAACTAA+TGG | - | Chr5:104140047-104140066 | None:intergenic | 25.0% |
| !! | AAATACATGTCTGTTTGTTT+TGG | - | Chr5:104140013-104140032 | None:intergenic | 25.0% |
| !! | ATACACTATATTTTCTGCAA+AGG | + | Chr5:104139890-104139909 | MsG0580029930.01.T01:five_prime_UTR | 25.0% |
| !! | TACACTATATTTTCTGCAAA+GGG | + | Chr5:104139891-104139910 | MsG0580029930.01.T01:five_prime_UTR | 25.0% |
| !! | TCACTTATATCCAAAGTTTT+TGG | + | Chr5:104142014-104142033 | MsG0580029930.01.T01:CDS | 25.0% |
| !! | TTTTGGATATGATAAAACCA+CGG | - | Chr5:104140281-104140300 | None:intergenic | 25.0% |
| !!! | AAGTCTCCTTTTTTGAAATT+TGG | - | Chr5:104140882-104140901 | None:intergenic | 25.0% |
| !!! | ATATTTTGAAGACCAAGTTT+GGG | + | Chr5:104141372-104141391 | MsG0580029930.01.T01:CDS | 25.0% |
| !!! | ATTAAGTTTTTTATGCCTTG+AGG | - | Chr5:104141940-104141959 | None:intergenic | 25.0% |
| AAGACATAATCTCCTTTCTT+AGG | - | Chr5:104141151-104141170 | None:intergenic | 30.0% | |
| AAGCGAAAAGCTTTACTAAT+CGG | - | Chr5:104141533-104141552 | None:intergenic | 30.0% | |
| AAGTATATGTCTATTCCTTC+AGG | - | Chr5:104141814-104141833 | None:intergenic | 30.0% | |
| AAGTTGTAAACTAATGGTAG+AGG | - | Chr5:104140041-104140060 | None:intergenic | 30.0% | |
| AATCCAGTATAATAGGAAAG+AGG | - | Chr5:104140987-104141006 | None:intergenic | 30.0% | |
| ACCAAGTAATCCAGTATAAT+AGG | - | Chr5:104140994-104141013 | None:intergenic | 30.0% | |
| ACGAATTATGTTGGAACTAA+GGG | + | Chr5:104140708-104140727 | MsG0580029930.01.T01:intron | 30.0% | |
| ACTTTATCTCTCTATTGCTA+TGG | - | Chr5:104140439-104140458 | None:intergenic | 30.0% | |
| AGACATAATCTCCTTTCTTA+GGG | - | Chr5:104141150-104141169 | None:intergenic | 30.0% | |
| ATATACTTTGACAATGTTGG+TGG | + | Chr5:104141826-104141845 | MsG0580029930.01.T01:CDS | 30.0% | |
| ATTATATATGTAGGTATGCC+TGG | + | Chr5:104141088-104141107 | MsG0580029930.01.T01:intron | 30.0% | |
| CTAATCTTAGCTGAGAAAAA+TGG | - | Chr5:104141690-104141709 | None:intergenic | 30.0% | |
| GACATATACTTTGACAATGT+TGG | + | Chr5:104141823-104141842 | MsG0580029930.01.T01:CDS | 30.0% | |
| GTTCTGTTTCAATTGTTGAT+AGG | + | Chr5:104141782-104141801 | MsG0580029930.01.T01:intron | 30.0% | |
| TATGTGATTATCTCTTCTAG+AGG | + | Chr5:104140778-104140797 | MsG0580029930.01.T01:intron | 30.0% | |
| TCCTATTATACTGGATTACT+TGG | + | Chr5:104140990-104141009 | MsG0580029930.01.T01:CDS | 30.0% | |
| TGTTAATCATCAAGAACCTA+AGG | + | Chr5:104141660-104141679 | MsG0580029930.01.T01:intron | 30.0% | |
| TTGTTCCTCCTTGTAATTAA+AGG | - | Chr5:104141408-104141427 | None:intergenic | 30.0% | |
| ! | ACACAATTTTGCCTTATGTT+AGG | + | Chr5:104142037-104142056 | MsG0580029930.01.T01:CDS | 30.0% |
| ! | AGGTTCTTGATGATTAACAT+CGG | - | Chr5:104141659-104141678 | None:intergenic | 30.0% |
| ! | ATTAGTAAAGCTTTTCGCTT+AGG | + | Chr5:104141533-104141552 | MsG0580029930.01.T01:intron | 30.0% |
| ! | CACAATTTTGCCTTATGTTA+GGG | + | Chr5:104142038-104142057 | MsG0580029930.01.T01:CDS | 30.0% |
| ! | GATTTGAATTTTATCGCTCA+AGG | + | Chr5:104140600-104140619 | MsG0580029930.01.T01:intron | 30.0% |
| ! | TGAGAAAAATGGATTTCCTT+AGG | - | Chr5:104141679-104141698 | None:intergenic | 30.0% |
| !! | AAGTGCTGGAAGTAAATATA+AGG | + | Chr5:104141246-104141265 | MsG0580029930.01.T01:CDS | 30.0% |
| !! | GATATTTTGAAGACCAAGTT+TGG | + | Chr5:104141371-104141390 | MsG0580029930.01.T01:CDS | 30.0% |
| !!! | GTTATTTTTGCCTGTTCTTT+TGG | - | Chr5:104140137-104140156 | None:intergenic | 30.0% |
| AAATTAACAGGGCAATCCAA+AGG | + | Chr5:104141505-104141524 | MsG0580029930.01.T01:intron | 35.0% | |
| AATTAACAGGGCAATCCAAA+GGG | + | Chr5:104141506-104141525 | MsG0580029930.01.T01:intron | 35.0% | |
| ACTTACTGAATCTGGAGAAA+AGG | - | Chr5:104140170-104140189 | None:intergenic | 35.0% | |
| ACTTCTTCAATGTTCCATCT+AGG | - | Chr5:104141433-104141452 | None:intergenic | 35.0% | |
| AGAACAAGTGATCAACAAAC+AGG | + | Chr5:104139958-104139977 | MsG0580029930.01.T01:CDS | 35.0% | |
| ATATGGAGTATGCAAAGTGT+TGG | + | Chr5:104140845-104140864 | MsG0580029930.01.T01:CDS | 35.0% | |
| CATACTCCATATCCAACAAT+TGG | - | Chr5:104140837-104140856 | None:intergenic | 35.0% | |
| CATTGTGTACTTACTGAATC+TGG | - | Chr5:104140178-104140197 | None:intergenic | 35.0% | |
| CTGGAGAAAAGGAATAAAAG+AGG | - | Chr5:104140159-104140178 | None:intergenic | 35.0% | |
| GACGAATTATGTTGGAACTA+AGG | + | Chr5:104140707-104140726 | MsG0580029930.01.T01:intron | 35.0% | |
| GGTCAACTAGCAAAATTGAT+GGG | + | Chr5:104141208-104141227 | MsG0580029930.01.T01:CDS | 35.0% | |
| GTACCTCTTTCCTATTATAC+TGG | + | Chr5:104140981-104141000 | MsG0580029930.01.T01:CDS | 35.0% | |
| GTCTTTATCTCTTCAGCATT+TGG | + | Chr5:104141166-104141185 | MsG0580029930.01.T01:CDS | 35.0% | |
| TATGAACTTGATGAACCTCA+AGG | + | Chr5:104141922-104141941 | MsG0580029930.01.T01:CDS | 35.0% | |
| TATGCAGGTTTCTATGAAGT+TGG | + | Chr5:104141121-104141140 | MsG0580029930.01.T01:CDS | 35.0% | |
| TGATAAAACCACGGCTAATT+TGG | - | Chr5:104140272-104140291 | None:intergenic | 35.0% | |
| TGATGAGGCCTTTAATTACA+AGG | + | Chr5:104141397-104141416 | MsG0580029930.01.T01:CDS | 35.0% | |
| TGGTCAACTAGCAAAATTGA+TGG | + | Chr5:104141207-104141226 | MsG0580029930.01.T01:CDS | 35.0% | |
| TTGATGGGATGTTATGTTGT+TGG | + | Chr5:104141223-104141242 | MsG0580029930.01.T01:CDS | 35.0% | |
| ! | AAAAAAGGAGACTTGGTTTG+GGG | + | Chr5:104140888-104140907 | MsG0580029930.01.T01:CDS | 35.0% |
| ! | ATTTTGCCTTATGTTAGGGA+AGG | + | Chr5:104142042-104142061 | MsG0580029930.01.T01:CDS | 35.0% |
| ! | CAAAAAAGGAGACTTGGTTT+GGG | + | Chr5:104140887-104140906 | MsG0580029930.01.T01:CDS | 35.0% |
| ! | GAACTTCGCAACACTTATTT+TGG | - | Chr5:104140298-104140317 | None:intergenic | 35.0% |
| ! | TCAAAAAAGGAGACTTGGTT+TGG | + | Chr5:104140886-104140905 | MsG0580029930.01.T01:CDS | 35.0% |
| ! | TTTTGCCTTATGTTAGGGAA+GGG | + | Chr5:104142043-104142062 | MsG0580029930.01.T01:CDS | 35.0% |
| !! | AGAAAAAAGTGGTATTGGCA+CGG | + | Chr5:104140410-104140429 | MsG0580029930.01.T01:intron | 35.0% |
| AAACCACGGCTAATTTGGAA+CGG | - | Chr5:104140267-104140286 | None:intergenic | 40.0% | |
| AACATTGCTTCTAATGCAGC+TGG | - | Chr5:104142114-104142133 | None:intergenic | 40.0% | |
| AGTTAAACTGTAACACCTCG+TGG | + | Chr5:104140629-104140648 | MsG0580029930.01.T01:intron | 40.0% | |
| ATAGCTAAAGGGATTGAGAG+TGG | + | Chr5:104142087-104142106 | MsG0580029930.01.T01:CDS | 40.0% | |
| ATCTTCCCTTCCCTAACATA+AGG | - | Chr5:104142051-104142070 | None:intergenic | 40.0% | |
| ATGAGAGGAACCAAAAGAAC+AGG | + | Chr5:104140124-104140143 | MsG0580029930.01.T01:CDS | 40.0% | |
| CTAGCTTCAGACTACATAAC+TGG | + | Chr5:104139983-104140002 | MsG0580029930.01.T01:CDS | 40.0% | |
| CTTAGGACGACGAATTATGT+TGG | + | Chr5:104140699-104140718 | MsG0580029930.01.T01:intron | 40.0% | |
| GCATTAGAAGCAATGTTCAC+AGG | + | Chr5:104142117-104142136 | MsG0580029930.01.T01:CDS | 40.0% | |
| TAGCTAAAGGGATTGAGAGT+GGG | + | Chr5:104142088-104142107 | MsG0580029930.01.T01:CDS | 40.0% | |
| TCTCAGCCAATTGTTGGATA+TGG | + | Chr5:104140828-104140847 | MsG0580029930.01.T01:intron | 40.0% | |
| TCTTGTGATCCTTACATGAG+AGG | + | Chr5:104140109-104140128 | MsG0580029930.01.T01:CDS | 40.0% | |
| TGAGGCCTTTAATTACAAGG+AGG | + | Chr5:104141400-104141419 | MsG0580029930.01.T01:CDS | 40.0% | |
| TGTTTCTCTCAGCCAATTGT+TGG | + | Chr5:104140822-104140841 | MsG0580029930.01.T01:intron | 40.0% | |
| TTAAGAATGTTGTGTCCACG+AGG | - | Chr5:104140647-104140666 | None:intergenic | 40.0% | |
| TTCATCTGTGCGAAAAGCTT+AGG | + | Chr5:104140682-104140701 | MsG0580029930.01.T01:intron | 40.0% | |
| TTTGATGAGGCTATCAGTCT+TGG | - | Chr5:104140946-104140965 | None:intergenic | 40.0% | |
| ! | GTTGATAGGTACTTTCCTGA+AGG | + | Chr5:104141796-104141815 | MsG0580029930.01.T01:intron | 40.0% |
| ! | TGTTATGTTGTTGGAAGTGC+TGG | + | Chr5:104141232-104141251 | MsG0580029930.01.T01:CDS | 40.0% |
| !! | CAGCATGCTCAATTTTGATG+AGG | - | Chr5:104140959-104140978 | None:intergenic | 40.0% |
| !! | GCTTCTTCTGAAGCATCTTT+AGG | - | Chr5:104140064-104140083 | None:intergenic | 40.0% |
| !!! | CTTTTGGTTCCTCTCATGTA+AGG | - | Chr5:104140121-104140140 | None:intergenic | 40.0% |
| !!! | TTTAGGCCTCACTTTTTGCT+GGG | + | Chr5:104141619-104141638 | MsG0580029930.01.T01:intron | 40.0% |
| AAGGAGGAACAAGACCTAGA+TGG | + | Chr5:104141416-104141435 | MsG0580029930.01.T01:CDS | 45.0% | |
| GATGCTGTACTCTTCCCATT+TGG | - | Chr5:104140919-104140938 | None:intergenic | 45.0% | |
| GCTTTACTAATCGGTCCCTT+TGG | - | Chr5:104141524-104141543 | None:intergenic | 45.0% | |
| TGCTTCAGAAGAAGCTGTGT+TGG | + | Chr5:104140069-104140088 | MsG0580029930.01.T01:CDS | 45.0% | |
| ! | ACGGCTAATTTGGAACGGAT+GGG | - | Chr5:104140262-104140281 | None:intergenic | 45.0% |
| ! | ATGTTCACAGGCAAAAGTGC+TGG | + | Chr5:104142129-104142148 | MsG0580029930.01.T01:CDS | 45.0% |
| ! | GACCAAGTTTGGGTTTGATG+AGG | + | Chr5:104141382-104141401 | MsG0580029930.01.T01:CDS | 45.0% |
| !! | GAAGTTGGTGTCCCTAAGAA+AGG | + | Chr5:104141136-104141155 | MsG0580029930.01.T01:CDS | 45.0% |
| !! | TCTTCAGCATTTGGTGCAGT+TGG | + | Chr5:104141175-104141194 | MsG0580029930.01.T01:CDS | 45.0% |
| !!! | CTTTAGGCCTCACTTTTTGC+TGG | + | Chr5:104141618-104141637 | MsG0580029930.01.T01:intron | 45.0% |
| CATCAGCCCAGCAAAAAGTG+AGG | - | Chr5:104141628-104141647 | None:intergenic | 50.0% | |
| CATCCGTTCCAAATTAGCCG+TGG | + | Chr5:104140261-104140280 | MsG0580029930.01.T01:intron | 50.0% | |
| CCTGCATAAGCAGTCATACC+AGG | - | Chr5:104141109-104141128 | None:intergenic | 50.0% | |
| CCTGGTATGACTGCTTATGC+AGG | + | Chr5:104141106-104141125 | MsG0580029930.01.T01:CDS | 50.0% | |
| CTTCTTAACATGAGACGCCG+CGG | + | Chr5:104141868-104141887 | MsG0580029930.01.T01:CDS | 50.0% | |
| GCGGCGTCTCATGTTAAGAA+GGG | - | Chr5:104141869-104141888 | None:intergenic | 50.0% | |
| GGCCTCATCAAACCCAAACT+TGG | - | Chr5:104141387-104141406 | None:intergenic | 50.0% | |
| GGTGCAGTTGGTCAACTTGT+TGG | + | Chr5:104141187-104141206 | MsG0580029930.01.T01:CDS | 50.0% | |
| GGTTTGGGGAGTCACCAAAT+GGG | + | Chr5:104140902-104140921 | MsG0580029930.01.T01:CDS | 50.0% | |
| ! | CACGGCTAATTTGGAACGGA+TGG | - | Chr5:104140263-104140282 | None:intergenic | 50.0% |
| ! | CGGCTAATTTGGAACGGATG+GGG | - | Chr5:104140261-104140280 | None:intergenic | 50.0% |
| ! | GGCTAATTTGGAACGGATGG+GGG | - | Chr5:104140260-104140279 | None:intergenic | 50.0% |
| ! | TGGTTTGGGGAGTCACCAAA+TGG | + | Chr5:104140901-104140920 | MsG0580029930.01.T01:CDS | 50.0% |
| CGCGGCGTCTCATGTTAAGA+AGG | - | Chr5:104141870-104141889 | None:intergenic | 55.0% | |
| CAGCCACCACAATTCGACCG+CGG | - | Chr5:104141888-104141907 | None:intergenic | 60.0% | |
| ACGCCGCGGTCGAATTGTGG+TGG | + | Chr5:104141882-104141901 | MsG0580029930.01.T01:CDS | 65.0% | |
| CGCGGTCGAATTGTGGTGGC+TGG | + | Chr5:104141886-104141905 | MsG0580029930.01.T01:CDS | 65.0% | |
| GAGACGCCGCGGTCGAATTG+TGG | + | Chr5:104141879-104141898 | MsG0580029930.01.T01:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr5 | gene | 104139867 | 104142328 | 104139867 | ID=MsG0580029930.01;Name=MsG0580029930.01 |
| Chr5 | mRNA | 104139867 | 104142328 | 104139867 | ID=MsG0580029930.01.T01;Parent=MsG0580029930.01;Name=MsG0580029930.01.T01;_AED=0.36;_eAED=0.36;_QI=86|0.75|0.6|1|1|1|5|146|345 |
| Chr5 | exon | 104139867 | 104140183 | 104139867 | ID=MsG0580029930.01.T01:exon:35298;Parent=MsG0580029930.01.T01 |
| Chr5 | exon | 104140834 | 104141011 | 104140834 | ID=MsG0580029930.01.T01:exon:35299;Parent=MsG0580029930.01.T01 |
| Chr5 | exon | 104141101 | 104141267 | 104141101 | ID=MsG0580029930.01.T01:exon:35300;Parent=MsG0580029930.01.T01 |
| Chr5 | exon | 104141368 | 104141450 | 104141368 | ID=MsG0580029930.01.T01:exon:35301;Parent=MsG0580029930.01.T01 |
| Chr5 | exon | 104141804 | 104142328 | 104141804 | ID=MsG0580029930.01.T01:exon:35302;Parent=MsG0580029930.01.T01 |
| Chr5 | five_prime_UTR | 104139867 | 104139952 | 104139867 | ID=MsG0580029930.01.T01:five_prime_utr;Parent=MsG0580029930.01.T01 |
| Chr5 | CDS | 104139953 | 104140183 | 104139953 | ID=MsG0580029930.01.T01:cds;Parent=MsG0580029930.01.T01 |
| Chr5 | CDS | 104140834 | 104141011 | 104140834 | ID=MsG0580029930.01.T01:cds;Parent=MsG0580029930.01.T01 |
| Chr5 | CDS | 104141101 | 104141267 | 104141101 | ID=MsG0580029930.01.T01:cds;Parent=MsG0580029930.01.T01 |
| Chr5 | CDS | 104141368 | 104141450 | 104141368 | ID=MsG0580029930.01.T01:cds;Parent=MsG0580029930.01.T01 |
| Chr5 | CDS | 104141804 | 104142182 | 104141804 | ID=MsG0580029930.01.T01:cds;Parent=MsG0580029930.01.T01 |
| Chr5 | three_prime_UTR | 104142183 | 104142328 | 104142183 | ID=MsG0580029930.01.T01:three_prime_utr;Parent=MsG0580029930.01.T01 |
| Gene Sequence |
| Protein sequence |
