AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0080048800.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0080048800.01.T01 MTR_3g118320 95.623 297 8 2 20 311 1 297 0.0 582
MsG0080048800.01.T01 MTR_3g118290 73.404 376 37 5 375 688 38 412 1.24e-143 431
MsG0080048800.01.T01 MTR_1g063850 35.135 148 59 2 577 688 253 399 6.17e-20 94.4
MsG0080048800.01.T01 MTR_7g101840 36.111 144 56 1 581 688 252 395 8.80e-20 94.0
MsG0080048800.01.T01 MTR_3g033420 49.425 87 42 1 602 688 160 244 2.51e-17 85.1
MsG0080048800.01.T01 MTR_0172s0030 35.252 139 54 1 586 688 201 339 1.64e-15 80.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0080048800.01.T01 AT5G17670 68.441 263 80 3 50 311 32 292 4.65e-120 361
MsG0080048800.01.T01 AT1G08540 42.771 332 101 9 428 688 97 410 1.96e-45 171
MsG0080048800.01.T01 AT2G36990 32.323 198 76 3 549 688 188 385 1.42e-21 99.8
MsG0080048800.01.T01 AT5G13730 52.381 63 30 0 626 688 195 257 2.64e-16 82.4
MsG0080048800.01.T01 AT1G64860 29.282 181 81 2 555 688 157 337 1.31e-14 77.4
MsG0080048800.01.T01 AT1G64860 28.729 181 82 2 555 688 157 337 1.44e-14 77.4

Find 19 sgRNAs with CRISPR-Local

Find 588 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGAAAGAGAATGCAAAGAAA+TGG 0.345829 contig451end:-7547 MsG0080048800.01.T01:exon
AGTGAGCATTTGGATGGAAT+TGG 0.358570 contig451end:+7445 None:intergenic
AGAAGAAGACAGTGAGCATT+TGG 0.366919 contig451end:+7435 None:intergenic
AAATGGGTGGAGAGGAAGTA+AGG 0.379334 contig451end:-7530 MsG0080048800.01.T01:exon
TGTTAACTTGTGGAGCAAAA+TGG 0.418912 contig451end:-7480 MsG0080048800.01.T01:exon
GAAAGAGAATGCAAAGAAAT+GGG 0.419006 contig451end:-7546 MsG0080048800.01.T01:exon
ATGCAAAGAAATGGGTGGAG+AGG 0.546001 contig451end:-7538 MsG0080048800.01.T01:exon
GAAGACAGTGAGCATTTGGA+TGG 0.553333 contig451end:+7439 None:intergenic
AATGGGTGGAGAGGAAGTAA+GGG 0.557835 contig451end:-7529 MsG0080048800.01.T01:exon
GACGGCGGGTCGATAGTTGT+TGG 0.564129 contig451end:+7399 None:intergenic
GAGACTAACCGGGAGAATGA+CGG 0.567802 contig451end:+7381 None:intergenic
TCGACCCGCCGTCATTCTCC+CGG 0.569276 contig451end:-7389 MsG0080048800.01.T01:intron
GGCGGGTCGATAGTTGTTGG+TGG 0.583420 contig451end:+7402 None:intergenic
CGAGCAGTGATGTTAACTTG+TGG 0.605981 contig451end:-7490 MsG0080048800.01.T01:exon
AGAGAATGCAAAGAAATGGG+TGG 0.618620 contig451end:-7543 MsG0080048800.01.T01:exon
TCTATTCTACTAGCTACTAG+CGG 0.668364 contig451end:+7567 None:intergenic
GCATTTGGATGGAATTGGAG+AGG 0.682203 contig451end:+7450 None:intergenic
CTAACCGGGAGAATGACGGC+GGG 0.709087 contig451end:+7385 None:intergenic
ACTAACCGGGAGAATGACGG+CGG 0.725962 contig451end:+7384 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTAAATTTTATTATTTA+AGG - contig451end:1732-1751 MsG0080048800.01.T01:CDS 0.0%
!!! GTATTTATTTTAAAAATTGT+CGG + contig451end:4501-4520 None:intergenic 10.0%
!!! TCTTTTAATGAAAAAAATTT+AGG - contig451end:4077-4096 MsG0080048800.01.T01:intron 10.0%
!!! TTTTTTCAAGATTAATTTTA+TGG - contig451end:4668-4687 MsG0080048800.01.T01:intron 10.0%
!! AAGATATAACGATAAATATT+GGG + contig451end:6482-6501 None:intergenic 15.0%
!! AATATAATTTGAAAACTTTC+CGG + contig451end:3452-3471 None:intergenic 15.0%
!! AGAAATTATTATTAGAACTT+TGG + contig451end:1227-1246 None:intergenic 15.0%
!! AGTTAATAACAATGATATAT+TGG + contig451end:635-654 None:intergenic 15.0%
!! ATATCTTAAAACAAACAATA+CGG + contig451end:3754-3773 None:intergenic 15.0%
!! CAAAAAAAAAAAAAAACACA+AGG + contig451end:4640-4659 None:intergenic 15.0%
!! TAAAACAAAATGAATTTGTA+CGG - contig451end:4999-5018 MsG0080048800.01.T01:intron 15.0%
!! TTAGTTAGTTAATTATTGTT+CGG - contig451end:5283-5302 MsG0080048800.01.T01:CDS 15.0%
!!! AAATTTAATCTAAAATCACT+TGG - contig451end:4521-4540 MsG0080048800.01.T01:intron 15.0%
!!! AGATGATATATTTTGTTTAA+AGG - contig451end:3934-3953 MsG0080048800.01.T01:intron 15.0%
!!! ATGAAAATCATTTTCTATAA+TGG + contig451end:1470-1489 None:intergenic 15.0%
!!! ATGACAAATTTTAAAACTAT+AGG - contig451end:7120-7139 MsG0080048800.01.T01:CDS 15.0%
!!! ATTGTTATTATGTTAGTAAT+AGG - contig451end:2977-2996 MsG0080048800.01.T01:intron 15.0%
!!! CTACTATTATTTTTTTGTTA+GGG - contig451end:2579-2598 MsG0080048800.01.T01:intron 15.0%
!!! TCTACTATTATTTTTTTGTT+AGG - contig451end:2578-2597 MsG0080048800.01.T01:intron 15.0%
!!! TTAAAGTTTTCAATTAAGAA+GGG - contig451end:5037-5056 MsG0080048800.01.T01:intron 15.0%
!!! TTTAAAGTTTTCAATTAAGA+AGG - contig451end:5036-5055 MsG0080048800.01.T01:intron 15.0%
!!! TTTTTTCTCTTTTAAATCAA+TGG + contig451end:4968-4987 None:intergenic 15.0%
!! AAACTATTGTAAGATTTACT+AGG + contig451end:4342-4361 None:intergenic 20.0%
!! AATATTGTTGAACATAATCA+AGG + contig451end:723-742 None:intergenic 20.0%
!! AGAATTATACATAAACTGAA+AGG - contig451end:3064-3083 MsG0080048800.01.T01:intron 20.0%
!! ATCAACTGAATTATCAATTT+AGG - contig451end:6651-6670 MsG0080048800.01.T01:intron 20.0%
!! ATTTGAGAAGTAAATTATCA+GGG + contig451end:5808-5827 None:intergenic 20.0%
!! CATATTTATATGTTAAGTTC+TGG - contig451end:2919-2938 MsG0080048800.01.T01:intron 20.0%
!! CTACATATAGAATTATTTGT+TGG + contig451end:2876-2895 None:intergenic 20.0%
!! GAAAGAATATTAATAGTGAA+AGG - contig451end:6590-6609 MsG0080048800.01.T01:CDS 20.0%
!! GAAGATATAACGATAAATAT+TGG + contig451end:6483-6502 None:intergenic 20.0%
!! GAATTATACATAAACTGAAA+GGG - contig451end:3065-3084 MsG0080048800.01.T01:intron 20.0%
!! TGATAATTTACTTCTCAAAT+GGG - contig451end:5808-5827 MsG0080048800.01.T01:intron 20.0%
!! TTAATTTATAGCCAAAACTA+TGG - contig451end:1152-1171 MsG0080048800.01.T01:intron 20.0%
!! TTTCATTCTTCTTGTATTTA+TGG - contig451end:1484-1503 MsG0080048800.01.T01:intron 20.0%
!!! AACACTATTAAAACTTTTGA+CGG - contig451end:4603-4622 MsG0080048800.01.T01:intron 20.0%
!!! ACATTGGTTATTTTATATGT+TGG - contig451end:3098-3117 MsG0080048800.01.T01:intron 20.0%
!!! AGTTCTAATAATAATTTCTC+AGG - contig451end:1228-1247 MsG0080048800.01.T01:intron 20.0%
!!! ATAAGGTTGGTATATTTATT+TGG - contig451end:2508-2527 MsG0080048800.01.T01:intron 20.0%
!!! ATAATTCAAACGTTTTCTTA+GGG + contig451end:6905-6924 None:intergenic 20.0%
!!! ATATAATTTGAAATATGCAC+TGG - contig451end:7094-7113 MsG0080048800.01.T01:CDS 20.0%
!!! ATATCATTGTTATTAACTCT+TGG - contig451end:637-656 MsG0080048800.01.T01:intron 20.0%
!!! ATATTTCAATGAATTTTCTC+AGG - contig451end:3505-3524 MsG0080048800.01.T01:intron 20.0%
!!! ATTAATTTTATGGCACTTAA+TGG - contig451end:4678-4697 MsG0080048800.01.T01:intron 20.0%
!!! ATTACACATTTTTTTCTCAA+CGG - contig451end:4722-4741 MsG0080048800.01.T01:intron 20.0%
!!! ATTACCTCATTGATATTTTT+AGG - contig451end:1587-1606 MsG0080048800.01.T01:CDS 20.0%
!!! ATTTTGTTTAAAGGTGTTTT+AGG - contig451end:3943-3962 MsG0080048800.01.T01:intron 20.0%
!!! TAGTTTTGGCTATAAATTAA+CGG + contig451end:1152-1171 None:intergenic 20.0%
!!! TATAATTTGAAATATGCACT+GGG - contig451end:7095-7114 MsG0080048800.01.T01:CDS 20.0%
!!! TTACCTCATTGATATTTTTA+GGG - contig451end:1588-1607 MsG0080048800.01.T01:CDS 20.0%
!!! TTGACTTTAAAACAAATTGT+GGG - contig451end:1703-1722 MsG0080048800.01.T01:CDS 20.0%
!!! TTTGACTTTAAAACAAATTG+TGG - contig451end:1702-1721 MsG0080048800.01.T01:CDS 20.0%
! AAAATGAATTTGTACGGTAT+TGG - contig451end:5005-5024 MsG0080048800.01.T01:intron 25.0%
! AAATATTGACGATAGTTCAA+TGG + contig451end:3298-3317 None:intergenic 25.0%
! AACACATCTTAAATCAAAAG+AGG - contig451end:7184-7203 MsG0080048800.01.T01:CDS 25.0%
! AAGATAAAGATAATACTCAC+TGG + contig451end:7512-7531 None:intergenic 25.0%
! AATGAAAATATTTCCATGCA+TGG + contig451end:7552-7571 None:intergenic 25.0%
! ATAATAATTTCTCAGGTTTG+TGG - contig451end:1235-1254 MsG0080048800.01.T01:intron 25.0%
! ATAATTGTTCATTTGATCAC+AGG - contig451end:6568-6587 MsG0080048800.01.T01:CDS 25.0%
! ATAGTTAAATGGTTGATTAC+TGG + contig451end:7334-7353 None:intergenic 25.0%
! ATCGTATAGTAAGTTATGTT+TGG + contig451end:900-919 None:intergenic 25.0%
! ATTTCTGAATTTCAGGATTT+AGG - contig451end:2774-2793 MsG0080048800.01.T01:intron 25.0%
! CATTTCATTTCATTCATTCA+AGG + contig451end:5260-5279 None:intergenic 25.0%
! CATTTCTTACTACAAAATGA+AGG - contig451end:933-952 MsG0080048800.01.T01:intron 25.0%
! CATTTGAGAAGTAAATTATC+AGG + contig451end:5809-5828 None:intergenic 25.0%
! CTAAGAAAACGTTTGAATTA+TGG - contig451end:6904-6923 MsG0080048800.01.T01:CDS 25.0%
! CTATATGTAGTATAGTTCAT+TGG - contig451end:2886-2905 MsG0080048800.01.T01:intron 25.0%
! CTGATAATTTACTTCTCAAA+TGG - contig451end:5807-5826 MsG0080048800.01.T01:intron 25.0%
! GAGATTATTGGATAATAACA+AGG + contig451end:3268-3287 None:intergenic 25.0%
! TAAATATACCAACCTTATTC+TGG + contig451end:2506-2525 None:intergenic 25.0%
! TAATAATTTCTCAGGTTTGT+GGG - contig451end:1236-1255 MsG0080048800.01.T01:intron 25.0%
! TATGTTGACCTATGAAAAAA+TGG - contig451end:1817-1836 MsG0080048800.01.T01:CDS 25.0%
! TCAAATTATATTACGTGCAT+AGG - contig451end:3460-3479 MsG0080048800.01.T01:intron 25.0%
! TCCTGAAATTCAGAAATAAA+TGG + contig451end:2771-2790 None:intergenic 25.0%
! TCGTATAGTAAGTTATGTTT+GGG + contig451end:899-918 None:intergenic 25.0%
! TGATGTCATATCTAACTTTA+TGG + contig451end:4255-4274 None:intergenic 25.0%
! TTAAGATATGAAGTCTTGAA+TGG - contig451end:3765-3784 MsG0080048800.01.T01:intron 25.0%
! TTCAGAGAACTTAATTTCTT+CGG + contig451end:6205-6224 None:intergenic 25.0%
! TTTCCAATTCCATTAACAAA+AGG - contig451end:2735-2754 MsG0080048800.01.T01:intron 25.0%
! TTTGAGAAGTAAATTATCAG+GGG + contig451end:5807-5826 None:intergenic 25.0%
!! AAAGCTTGTTTAGAACAATA+TGG - contig451end:6400-6419 MsG0080048800.01.T01:intron 25.0%
!! AATGAAAAAAATTTAGGACG+AGG - contig451end:4083-4102 MsG0080048800.01.T01:intron 25.0%
!! ACAAAATGAAGGTATATTCA+AGG - contig451end:944-963 MsG0080048800.01.T01:intron 25.0%
!! ACAAGTTTGATTTCATCATT+AGG + contig451end:4802-4821 None:intergenic 25.0%
!! AGTGTTCTATTTTCACTAAA+TGG + contig451end:4589-4608 None:intergenic 25.0%
!! ATGAAAAAAATTTAGGACGA+GGG - contig451end:4084-4103 MsG0080048800.01.T01:intron 25.0%
!! CAAAATGAAGGTATATTCAA+GGG - contig451end:945-964 MsG0080048800.01.T01:intron 25.0%
!! CAATATTTTGCTAGAAAGTA+CGG - contig451end:7046-7065 MsG0080048800.01.T01:CDS 25.0%
!! CATAATTCAAACGTTTTCTT+AGG + contig451end:6906-6925 None:intergenic 25.0%
!! TATTTTGTCTTCTTCAACAA+CGG - contig451end:5526-5545 MsG0080048800.01.T01:intron 25.0%
!! TCTTATTTGAGCAAAACATA+AGG + contig451end:4183-4202 None:intergenic 25.0%
!! TTCATGATGTTTGCTTTATT+TGG + contig451end:2213-2232 None:intergenic 25.0%
!! TTGGCAATTTTCAAATAAAC+AGG + contig451end:7576-7595 None:intergenic 25.0%
!! TTTATGAGATTGAGAACTTT+TGG - contig451end:2661-2680 MsG0080048800.01.T01:intron 25.0%
!! TTTCTAGCAAAATATTGTAC+AGG + contig451end:7043-7062 None:intergenic 25.0%
!!! ACCATTTAACTATTTTTCGT+TGG - contig451end:7341-7360 MsG0080048800.01.T01:intron 25.0%
!!! AGACTTTTGTTATAAAACCT+AGG + contig451end:6266-6285 None:intergenic 25.0%
!!! ATCAAAAAAGACTACTTTTG+AGG + contig451end:834-853 None:intergenic 25.0%
!!! ATTTTATATGTTGGTTGGTT+TGG - contig451end:3107-3126 MsG0080048800.01.T01:intron 25.0%
!!! ATTTTTTCATAGGTCAACAT+AGG + contig451end:1818-1837 None:intergenic 25.0%
!!! CCATTTAACTATTTTTCGTT+GGG - contig451end:7342-7361 MsG0080048800.01.T01:intron 25.0%
!!! GTTTTTTATTTCTTGAACCA+GGG - contig451end:304-323 MsG0080048800.01.T01:intron 25.0%
!!! TCAAAAAAGACTACTTTTGA+GGG + contig451end:833-852 None:intergenic 25.0%
!!! TCATGATGTTTGCTTTATTT+GGG + contig451end:2212-2231 None:intergenic 25.0%
!!! TGACTTTAAAACAAATTGTG+GGG - contig451end:1704-1723 MsG0080048800.01.T01:CDS 25.0%
!!! TGGTTATTTTATATGTTGGT+TGG - contig451end:3102-3121 MsG0080048800.01.T01:intron 25.0%
!!! TGTCTTGTAATTGTTGTTTT+GGG + contig451end:5503-5522 None:intergenic 25.0%
!!! TTTTATATGTTGGTTGGTTT+GGG - contig451end:3108-3127 MsG0080048800.01.T01:intron 25.0%
!!! TTTTTGAGATTGTGACTTTA+GGG - contig451end:2605-2624 MsG0080048800.01.T01:intron 25.0%
!!! TTTTTTATTTCTTGAACCAG+GGG - contig451end:305-324 MsG0080048800.01.T01:intron 25.0%
AACAATAGTGTCAATTCCTT+TGG + contig451end:3719-3738 None:intergenic 30.0%
AACACATATTGCACATTGTT+TGG - contig451end:3889-3908 MsG0080048800.01.T01:intron 30.0%
AATGGTATTTGGGAGATTAT+TGG + contig451end:3280-3299 None:intergenic 30.0%
ACAATAGTGTCAATTCCTTT+GGG + contig451end:3718-3737 None:intergenic 30.0%
ACACATATTGCACATTGTTT+GGG - contig451end:3890-3909 MsG0080048800.01.T01:intron 30.0%
ACATAAACTGAAAGGGAAAA+GGG - contig451end:3072-3091 MsG0080048800.01.T01:intron 30.0%
ACGATAGTTCAATGGTATTT+GGG + contig451end:3290-3309 None:intergenic 30.0%
ACTAGTATATTGTGCTATCA+TGG - contig451end:3348-3367 MsG0080048800.01.T01:intron 30.0%
AGAAAGAGAATGCAAAGAAA+TGG - contig451end:63-82 MsG0080048800.01.T01:intron 30.0%
ATAACAAAAGTCTACTATCG+CGG - contig451end:6273-6292 MsG0080048800.01.T01:CDS 30.0%
ATAGTAAGTTATGTTTGGGT+TGG + contig451end:895-914 None:intergenic 30.0%
ATCAGTTGCTAAGAATTATC+AGG - contig451end:6974-6993 MsG0080048800.01.T01:CDS 30.0%
CATCTTCAAGCTAATTAAAG+AGG + contig451end:1426-1445 None:intergenic 30.0%
CATGTTGAATATCACAAGAA+TGG + contig451end:7274-7293 None:intergenic 30.0%
CATTCTTGTGATATTCAACA+TGG - contig451end:7272-7291 MsG0080048800.01.T01:CDS 30.0%
CCCAACGAAAAATAGTTAAA+TGG + contig451end:7345-7364 None:intergenic 30.0%
CGATAAATATTGGGTGATTT+AGG + contig451end:6473-6492 None:intergenic 30.0%
CTAGACATTGCATATTTAGA+AGG + contig451end:2555-2574 None:intergenic 30.0%
GAAAGAGAATGCAAAGAAAT+GGG - contig451end:64-83 MsG0080048800.01.T01:intron 30.0%
GAAATTCAGAAATAAATGGC+AGG + contig451end:2767-2786 None:intergenic 30.0%
GAAGAAATTAAGTTCTCTGA+AGG - contig451end:6204-6223 MsG0080048800.01.T01:intron 30.0%
GATCCCTAAAAATATCAATG+AGG + contig451end:1594-1613 None:intergenic 30.0%
GTTAATTATTGTTCGGAGAA+AGG - contig451end:5290-5309 MsG0080048800.01.T01:CDS 30.0%
TACATAAACTGAAAGGGAAA+AGG - contig451end:3071-3090 MsG0080048800.01.T01:intron 30.0%
TAGAAAACTAACAAACCTCT+AGG + contig451end:3154-3173 None:intergenic 30.0%
TAGGGAAAAAGACAACAAAT+TGG - contig451end:2623-2642 MsG0080048800.01.T01:intron 30.0%
TCAGTTGCTAAGAATTATCA+GGG - contig451end:6975-6994 MsG0080048800.01.T01:CDS 30.0%
TCATATATCACTTGAAGCAA+TGG - contig451end:4763-4782 MsG0080048800.01.T01:intron 30.0%
TGAAGATGTTCCATTATATC+TGG + contig451end:5890-5909 None:intergenic 30.0%
TGTACTATTGATACACACTA+TGG + contig451end:3233-3252 None:intergenic 30.0%
TTAAAAGCAAAAGACATCGA+AGG + contig451end:4418-4437 None:intergenic 30.0%
TTATTTGCTTGTGATAGATG+CGG - contig451end:1189-1208 MsG0080048800.01.T01:intron 30.0%
TTCTCAATCTCATAAAGTGT+AGG + contig451end:2657-2676 None:intergenic 30.0%
TTGACCTATGAAAAAATGGT+CGG - contig451end:1821-1840 MsG0080048800.01.T01:CDS 30.0%
TTGTAAATTAGTGCCAGAAA+AGG - contig451end:6529-6548 MsG0080048800.01.T01:CDS 30.0%
TTTCAAATTATATCCGTGTG+TGG + contig451end:7087-7106 None:intergenic 30.0%
! AAAGAGATGATGATGATGAT+GGG + contig451end:5390-5409 None:intergenic 30.0%
! CTCTTTTAAATCAATGGCTA+TGG + contig451end:4962-4981 None:intergenic 30.0%
! GAGCATCAAATTTGAAATCA+AGG + contig451end:5556-5575 None:intergenic 30.0%
! TGAAAAAAATTTAGGACGAG+GGG - contig451end:4085-4104 MsG0080048800.01.T01:intron 30.0%
! TGGATTTGAGTTTCCAAAAA+GGG + contig451end:974-993 None:intergenic 30.0%
! TGTAACATTCTTTCCTTTTC+TGG + contig451end:6545-6564 None:intergenic 30.0%
! TTGGATTTGAGTTTCCAAAA+AGG + contig451end:975-994 None:intergenic 30.0%
!! ACTTTAAAACAAATTGTGGG+GGG - contig451end:1706-1725 MsG0080048800.01.T01:CDS 30.0%
!! AGATTGAGAACTTTTGGTTA+GGG - contig451end:2667-2686 MsG0080048800.01.T01:intron 30.0%
!! GAAGAAATTTTGATCACCAA+AGG + contig451end:1878-1897 None:intergenic 30.0%
!! GACTTTAAAACAAATTGTGG+GGG - contig451end:1705-1724 MsG0080048800.01.T01:CDS 30.0%
!! GCCATTTATTTCTGAATTTC+AGG - contig451end:2767-2786 MsG0080048800.01.T01:intron 30.0%
!! TATAAAACCTAGGTTCTAAG+TGG + contig451end:6256-6275 None:intergenic 30.0%
!!! AGAGGTTTGTTAGTTTTCTA+TGG - contig451end:3154-3173 MsG0080048800.01.T01:intron 30.0%
!!! GGTTTTTTATTTCTTGAACC+AGG - contig451end:303-322 MsG0080048800.01.T01:intron 30.0%
!!! GTGTCTTGTAATTGTTGTTT+TGG + contig451end:5504-5523 None:intergenic 30.0%
!!! GTTTTAGTTATTGTTCCCAA+AGG - contig451end:3700-3719 MsG0080048800.01.T01:intron 30.0%
!!! GTTTTTGAGATTGTGACTTT+AGG - contig451end:2604-2623 MsG0080048800.01.T01:intron 30.0%
!!! TGCTATCATGGCTTTTTTAA+AGG - contig451end:3360-3379 MsG0080048800.01.T01:intron 30.0%
!!! TTCCGACTATTTTTTTGGTA+GGG - contig451end:4562-4581 MsG0080048800.01.T01:intron 30.0%
!!! TTCTGGCTTTTCTTTCTATT+TGG + contig451end:6027-6046 None:intergenic 30.0%
AAAGCTCGAAAAACTTCAAG+AGG - contig451end:6807-6826 MsG0080048800.01.T01:intron 35.0%
AACAAGTTGTTGAATGCATG+TGG + contig451end:2717-2736 None:intergenic 35.0%
AAGAAGTGATTCTACAGATG+AGG + contig451end:5639-5658 None:intergenic 35.0%
AAGCAATAGGTGATAGATGA+TGG - contig451end:3578-3597 MsG0080048800.01.T01:intron 35.0%
AAGCTAATGTAGCAGATCAT+CGG + contig451end:4315-4334 None:intergenic 35.0%
AAGGAGAAATAGAGACTAAC+CGG + contig451end:243-262 None:intergenic 35.0%
AATCACTTTCTGTTCAGTCA+AGG - contig451end:7474-7493 MsG0080048800.01.T01:exon 35.0%
AATTAGGGAGCCAATGTAAA+GGG + contig451end:2097-2116 None:intergenic 35.0%
ACAACACTTTGAGTCAACAT+TGG - contig451end:1933-1952 MsG0080048800.01.T01:CDS 35.0%
ACGAAGGTAAAATTAGACAG+AGG - contig451end:5063-5082 MsG0080048800.01.T01:intron 35.0%
ACTAGTATAGATGCAAGATC+CGG - contig451end:5998-6017 MsG0080048800.01.T01:intron 35.0%
AGTAGAAAAAGTGGATAGAC+GGG - contig451end:13-32 MsG0080048800.01.T01:intron 35.0%
ATCACAAAGCAATATTTCCC+TGG - contig451end:1521-1540 MsG0080048800.01.T01:CDS 35.0%
ATGTTATGTCCAAAAGCAGT+TGG - contig451end:3533-3552 MsG0080048800.01.T01:intron 35.0%
ATTAAAGTCATCCTCTTGGT+TGG + contig451end:5921-5940 None:intergenic 35.0%
CACATATTGCACATTGTTTG+GGG - contig451end:3891-3910 MsG0080048800.01.T01:intron 35.0%
CAGTAGAAAAAGTGGATAGA+CGG - contig451end:12-31 MsG0080048800.01.T01:intron 35.0%
CAGTAGCAAACAGATTAGAA+AGG + contig451end:1547-1566 None:intergenic 35.0%
CATCATTAAAGTCATCCTCT+TGG + contig451end:5925-5944 None:intergenic 35.0%
CGCTGATATAGATATAGAGA+AGG + contig451end:262-281 None:intergenic 35.0%
CTAAGAATTATCAGGGATCT+GGG - contig451end:6982-7001 MsG0080048800.01.T01:CDS 35.0%
CTACCAAAAAAATAGTCGGA+AGG + contig451end:4563-4582 None:intergenic 35.0%
CTCTCTTCAAATACCAATCA+AGG + contig451end:495-514 None:intergenic 35.0%
CTTCTCCTGCAATATAATTC+AGG - contig451end:6777-6796 MsG0080048800.01.T01:intron 35.0%
GAACAACAACTAGAACTACA+AGG - contig451end:6166-6185 MsG0080048800.01.T01:intron 35.0%
GAAGAGCTTCCTTTCAATTA+GGG + contig451end:2112-2131 None:intergenic 35.0%
GAATTATATTGCAGGAGAAG+AGG + contig451end:6777-6796 None:intergenic 35.0%
GACCCTACCAAAAAAATAGT+CGG + contig451end:4567-4586 None:intergenic 35.0%
GACGATAGTTCAATGGTATT+TGG + contig451end:3291-3310 None:intergenic 35.0%
GAGAACTTAATTTCTTCGGA+TGG + contig451end:6201-6220 None:intergenic 35.0%
GATATTGTATATGTGGCTAC+CGG - contig451end:3430-3449 MsG0080048800.01.T01:intron 35.0%
GCAACTCTGAACAATAACTA+CGG - contig451end:364-383 MsG0080048800.01.T01:intron 35.0%
GGAAAAAGACAACAAATTGG+AGG - contig451end:2626-2645 MsG0080048800.01.T01:intron 35.0%
GGTAAAATTAGACAGAGGTA+AGG - contig451end:5068-5087 MsG0080048800.01.T01:intron 35.0%
GGTTATAGTAATCGTGTTTG+AGG + contig451end:2188-2207 None:intergenic 35.0%
GTCTGTATATGCAGCAATTT+GGG - contig451end:605-624 MsG0080048800.01.T01:CDS 35.0%
GTTGTTCTTAAGTAACGCAA+TGG + contig451end:6153-6172 None:intergenic 35.0%
TATATCACTTGAAGCAATGG+TGG - contig451end:4766-4785 MsG0080048800.01.T01:intron 35.0%
TATGGTTATTCTGACAACAG+AGG + contig451end:3215-3234 None:intergenic 35.0%
TATTTCTTTCTGACCATGCA+TGG - contig451end:7536-7555 MsG0080048800.01.T01:exon 35.0%
TCCAAAAGCAACTTTACTAG+TGG + contig451end:3866-3885 None:intergenic 35.0%
TCTATTCTACTAGCTACTAG+CGG + contig451end:46-65 None:intergenic 35.0%
TCTGTATATGCAGCAATTTG+GGG - contig451end:606-625 MsG0080048800.01.T01:CDS 35.0%
TGAAGAGCTTCCTTTCAATT+AGG + contig451end:2113-2132 None:intergenic 35.0%
TGACCTATGAAAAAATGGTC+GGG - contig451end:1822-1841 MsG0080048800.01.T01:CDS 35.0%
TGTACAGGTGAAAATATACC+TGG + contig451end:7028-7047 None:intergenic 35.0%
TTAAAGTCATCCTCTTGGTT+GGG + contig451end:5920-5939 None:intergenic 35.0%
TTAGTATGAGTCATTGCACT+TGG - contig451end:7223-7242 MsG0080048800.01.T01:CDS 35.0%
TTCAAATACCAATCAAGGAC+AGG + contig451end:490-509 None:intergenic 35.0%
TTCCCATTCGGATAAGAAAA+GGG + contig451end:5163-5182 None:intergenic 35.0%
TTGGAGATAGAACTTGGAAT+TGG - contig451end:2813-2832 MsG0080048800.01.T01:intron 35.0%
TTTAATCCACCAATGAGCAT+AGG + contig451end:7441-7460 None:intergenic 35.0%
TTTGAGTCTTGAGATCTACT+CGG + contig451end:4130-4149 None:intergenic 35.0%
! AGAAGTCATTGTTGGAGTTT+TGG + contig451end:7595-7614 None:intergenic 35.0%
! AGAGAAGTATGATGCTTCTA+AGG - contig451end:7400-7419 MsG0080048800.01.T01:exon 35.0%
! CTGCCTTTTGTTAATGGAAT+TGG + contig451end:2741-2760 None:intergenic 35.0%
! CTTTCTAATCTGTTTGCTAC+TGG - contig451end:1545-1564 MsG0080048800.01.T01:CDS 35.0%
! GAAAGAGATGATGATGATGA+TGG + contig451end:5391-5410 None:intergenic 35.0%
! GAGAAGTATGATGCTTCTAA+GGG - contig451end:7401-7420 MsG0080048800.01.T01:exon 35.0%
! GCTTGCTGATATTGTATATG+TGG - contig451end:3423-3442 MsG0080048800.01.T01:intron 35.0%
! GGATTTGAGTTTCCAAAAAG+GGG + contig451end:973-992 None:intergenic 35.0%
! GTGGTTGTTGATTATGTTGT+GGG + contig451end:5769-5788 None:intergenic 35.0%
! TAAGTTCTCTGAAGGAATAC+AGG - contig451end:6212-6231 MsG0080048800.01.T01:intron 35.0%
! TACTTGTTGGAGATAGAACT+TGG - contig451end:2807-2826 MsG0080048800.01.T01:intron 35.0%
! TAGAAAGTACGGACACTAAA+GGG - contig451end:7057-7076 MsG0080048800.01.T01:CDS 35.0%
! TCAAGAGCATATGAAGAGAA+TGG + contig451end:6437-6456 None:intergenic 35.0%
! TCTATCATTGATTGGTCACT+CGG - contig451end:564-583 MsG0080048800.01.T01:intron 35.0%
! TCTGGTTTCGTCATAATAAC+CGG + contig451end:2258-2277 None:intergenic 35.0%
! TGGCTTTTCTTTCTATTTGG+CGG + contig451end:6024-6043 None:intergenic 35.0%
! TGGTTGTTGATTATGTTGTG+GGG + contig451end:5768-5787 None:intergenic 35.0%
! TTAAAAGCTCTGGTTGGTAT+TGG + contig451end:2059-2078 None:intergenic 35.0%
! TTTGATAATAGCAGTCTCCT+CGG + contig451end:1040-1059 None:intergenic 35.0%
! TTTTAGCGCAGTAGAAAAAG+TGG - contig451end:4-23 MsG0080048800.01.T01:intron 35.0%
! TTTTCATAGGTCAACATAGG+TGG + contig451end:1815-1834 None:intergenic 35.0%
! TTTTCTTATCCGAATGGGAA+GGG - contig451end:5163-5182 MsG0080048800.01.T01:intron 35.0%
!! ACTATTTTTCGTTGGGTTAC+AGG - contig451end:7349-7368 MsG0080048800.01.T01:intron 35.0%
!! GAGATTGAGAACTTTTGGTT+AGG - contig451end:2666-2685 MsG0080048800.01.T01:intron 35.0%
!! TCCACTAGTAAAGTTGCTTT+TGG - contig451end:3862-3881 MsG0080048800.01.T01:intron 35.0%
!! TGATGTTTGCTTTATTTGGG+AGG + contig451end:2209-2228 None:intergenic 35.0%
!! TGTGGTCTTATTCAAGCAAT+AGG - contig451end:3565-3584 MsG0080048800.01.T01:intron 35.0%
!! TGTTAACTTGTGGAGCAAAA+TGG - contig451end:130-149 MsG0080048800.01.T01:CDS 35.0%
!!! CTTCCGACTATTTTTTTGGT+AGG - contig451end:4561-4580 MsG0080048800.01.T01:intron 35.0%
!!! GAAGTTTTTCGAGCTTTATG+AGG + contig451end:6804-6823 None:intergenic 35.0%
!!! GAATGTGTTTTTTCCACTAG+TGG + contig451end:2291-2310 None:intergenic 35.0%
!!! GTTCCTTCCGACTATTTTTT+TGG - contig451end:4557-4576 MsG0080048800.01.T01:intron 35.0%
!!! TAACCCGACCATTTTTTCAT+AGG + contig451end:1828-1847 None:intergenic 35.0%
AACACACACACACTCTTTCA+AGG - contig451end:797-816 MsG0080048800.01.T01:CDS 40.0%
AACCAAATGAATGCGATGTG+AGG + contig451end:287-306 None:intergenic 40.0%
AACTGCTATGTTACTGCTGT+AGG - contig451end:3036-3055 MsG0080048800.01.T01:intron 40.0%
AAGAACTGCAGTCTCAATGT+TGG + contig451end:6325-6344 None:intergenic 40.0%
AAGACATCATCTGAACCAAC+CGG + contig451end:1355-1374 None:intergenic 40.0%
AAGAGTCCACACTTCTTCAA+TGG - contig451end:7306-7325 MsG0080048800.01.T01:intron 40.0%
AAGTGATTCTACAGATGAGG+AGG + contig451end:5636-5655 None:intergenic 40.0%
AATCTGAAAACTCACCACCT+TGG - contig451end:5585-5604 MsG0080048800.01.T01:intron 40.0%
AATGCATGTGGAGTTTCCAT+GGG + contig451end:2705-2724 None:intergenic 40.0%
AGAAGAAGACAGTGAGCATT+TGG + contig451end:178-197 None:intergenic 40.0%
AGAGAATGCAAAGAAATGGG+TGG - contig451end:67-86 MsG0080048800.01.T01:intron 40.0%
AGAGGTAAGGAATTGAGTGA+CGG - contig451end:5081-5100 MsG0080048800.01.T01:intron 40.0%
AGGAGAAATAGAGACTAACC+GGG + contig451end:242-261 None:intergenic 40.0%
AGGTCAAAGTGGAATGATGT+AGG + contig451end:2021-2040 None:intergenic 40.0%
AGTAAATTATCAGGGGTGGA+AGG + contig451end:5800-5819 None:intergenic 40.0%
AGTATGTATGCATAGCAGGA+AGG - contig451end:773-792 MsG0080048800.01.T01:CDS 40.0%
AGTGAGCATTTGGATGGAAT+TGG + contig451end:168-187 None:intergenic 40.0%
AGTTCTCAACCTATGCTCAT+TGG - contig451end:7429-7448 MsG0080048800.01.T01:exon 40.0%
ATCAATGATAGAGTGGTCTC+AGG + contig451end:556-575 None:intergenic 40.0%
ATCCATTGTTCCAACACATC+AGG + contig451end:1397-1416 None:intergenic 40.0%
ATGAAAGACTAGGAGGCTTA+TGG - contig451end:3613-3632 MsG0080048800.01.T01:intron 40.0%
ATGCATACATACTTGAGGTG+AGG + contig451end:766-785 None:intergenic 40.0%
ATGTCACACTCACCAGAATA+AGG - contig451end:2491-2510 MsG0080048800.01.T01:intron 40.0%
ATTTCAGGATTTAGGTGCAC+AGG - contig451end:2782-2801 MsG0080048800.01.T01:intron 40.0%
ATTTCTTGAACCAGGGGTTA+GGG - contig451end:311-330 MsG0080048800.01.T01:intron 40.0%
CAAACAGATTAGAAAGGCCA+GGG + contig451end:1541-1560 None:intergenic 40.0%
CAATTAAGAAGGGTGAACGA+AGG - contig451end:5047-5066 MsG0080048800.01.T01:intron 40.0%
CAATTAGGGAGCCAATGTAA+AGG + contig451end:2098-2117 None:intergenic 40.0%
CAGATGATGTCTTTAGACCA+TGG - contig451end:1362-1381 MsG0080048800.01.T01:intron 40.0%
CATATGGCAGATCTTGGAAT+TGG + contig451end:1905-1924 None:intergenic 40.0%
CGTCTGTATATGCAGCAATT+TGG - contig451end:604-623 MsG0080048800.01.T01:CDS 40.0%
CTCAAGTATGTATGCATAGC+AGG - contig451end:769-788 MsG0080048800.01.T01:CDS 40.0%
CTGCTATGCATACATACTTG+AGG + contig451end:771-790 None:intergenic 40.0%
CTGTTATTCTCATGTTGCAC+CGG - contig451end:3397-3416 MsG0080048800.01.T01:intron 40.0%
CTTCCCATTCGGATAAGAAA+AGG + contig451end:5164-5183 None:intergenic 40.0%
CTTCTGCCATTCCGTAAAAT+AGG - contig451end:7610-7629 MsG0080048800.01.T01:exon 40.0%
CTTCTGTTCTGTTCTGTTCT+GGG + contig451end:5222-5241 None:intergenic 40.0%
CTTGAGTCACATGAAAGACT+AGG - contig451end:3603-3622 MsG0080048800.01.T01:intron 40.0%
CTTTGCGACAATACTTTCTG+TGG + contig451end:4005-4024 None:intergenic 40.0%
GAGAAGTAAATTATCAGGGG+TGG + contig451end:5804-5823 None:intergenic 40.0%
GAGACCACTCTATCATTGAT+TGG - contig451end:556-575 MsG0080048800.01.T01:intron 40.0%
GAGGTCCTGAATTATATTGC+AGG + contig451end:6785-6804 None:intergenic 40.0%
GATGTCTTTAGACCATGGTA+TGG - contig451end:1367-1386 MsG0080048800.01.T01:intron 40.0%
GCTAAGAATTATCAGGGATC+TGG - contig451end:6981-7000 MsG0080048800.01.T01:CDS 40.0%
GGAGAAGAGGCAAATGAATT+AGG + contig451end:6764-6783 None:intergenic 40.0%
GTGACCAATCAATGATAGAG+TGG + contig451end:563-582 None:intergenic 40.0%
GTTTGATCGATCCCAATTAC+TGG - contig451end:443-462 MsG0080048800.01.T01:intron 40.0%
TAAACTGAAAGGGAAAAGGG+AGG - contig451end:3075-3094 MsG0080048800.01.T01:intron 40.0%
TAAAGTCATCCTCTTGGTTG+GGG + contig451end:5919-5938 None:intergenic 40.0%
TACAATATCAGCAAGCATGC+CGG + contig451end:3419-3438 None:intergenic 40.0%
TACCACAATCGTTAGTGTGA+CGG - contig451end:6370-6389 MsG0080048800.01.T01:intron 40.0%
TACTGGTGGTATGTCTATAG+AGG - contig451end:1562-1581 MsG0080048800.01.T01:CDS 40.0%
TATTTCTTGAACCAGGGGTT+AGG - contig451end:310-329 MsG0080048800.01.T01:intron 40.0%
TCAAGATGAGCTGATACTTC+TGG + contig451end:1292-1311 None:intergenic 40.0%
TCCATTGTTCCAACACATCA+GGG + contig451end:1396-1415 None:intergenic 40.0%
TCGTCATAATAACCGGATGA+TGG + contig451end:2251-2270 None:intergenic 40.0%
TCTTCTGTTCTGTTCTGTTC+TGG + contig451end:5223-5242 None:intergenic 40.0%
TGAAGCTCTTACTCTTGCTA+AGG - contig451end:5694-5713 MsG0080048800.01.T01:intron 40.0%
TGAGCAACTTGAAGATGTAG+AGG - contig451end:5961-5980 MsG0080048800.01.T01:intron 40.0%
TGCATACATACTTGAGGTGA+GGG + contig451end:765-784 None:intergenic 40.0%
TGCATTACCACTTAGAACCT+AGG - contig451end:6246-6265 MsG0080048800.01.T01:intron 40.0%
TGGTTTGATCGATAACACCA+GGG + contig451end:693-712 None:intergenic 40.0%
TGTTATGTTGGGTGAAGAAG+TGG + contig451end:1070-1089 None:intergenic 40.0%
TGTTCGGAGAAAGGATAATG+TGG - contig451end:5299-5318 MsG0080048800.01.T01:CDS 40.0%
TTCTGTTCTGTTCTGTTCTG+GGG + contig451end:5221-5240 None:intergenic 40.0%
TTTCTTATCCGAATGGGAAG+GGG - contig451end:5164-5183 MsG0080048800.01.T01:intron 40.0%
! AAAAATTTAGGACGAGGGGT+TGG - contig451end:4089-4108 MsG0080048800.01.T01:intron 40.0%
! AGAAAGTACGGACACTAAAG+GGG - contig451end:7058-7077 MsG0080048800.01.T01:CDS 40.0%
! AGGTAGCTGCCTTTTGTTAA+TGG + contig451end:2747-2766 None:intergenic 40.0%
! AGTGGTTTAAAAGCTCTGGT+TGG + contig451end:2065-2084 None:intergenic 40.0%
! CACCCTTTTCTTATCCGAAT+GGG - contig451end:5158-5177 MsG0080048800.01.T01:intron 40.0%
! CAGTTTGCACACCATAGTTT+TGG + contig451end:1166-1185 None:intergenic 40.0%
! CTAGAAAGTACGGACACTAA+AGG - contig451end:7056-7075 MsG0080048800.01.T01:CDS 40.0%
! CTTGGAATTGGTGTCTTTGT+TGG - contig451end:2825-2844 MsG0080048800.01.T01:intron 40.0%
! CTTTTCTTATCCGAATGGGA+AGG - contig451end:5162-5181 MsG0080048800.01.T01:intron 40.0%
! GAAGTATCAGCTCATCTTGA+CGG - contig451end:1292-1311 MsG0080048800.01.T01:intron 40.0%
! GCATTGTTAGATTTTGTGGC+AGG - contig451end:3790-3809 MsG0080048800.01.T01:intron 40.0%
! GGCAGCATTGTTAGATTTTG+TGG - contig451end:3786-3805 MsG0080048800.01.T01:intron 40.0%
! GGTGGTTGTTGATTATGTTG+TGG + contig451end:5770-5789 None:intergenic 40.0%
! GGTTGTTGATTATGTTGTGG+GGG + contig451end:5767-5786 None:intergenic 40.0%
! GTTGTTGATTATGTTGTGGG+GGG + contig451end:5766-5785 None:intergenic 40.0%
! TCACCCTTTTCTTATCCGAA+TGG - contig451end:5157-5176 MsG0080048800.01.T01:intron 40.0%
! TCTAATCTGTTTGCTACTGG+TGG - contig451end:1548-1567 MsG0080048800.01.T01:CDS 40.0%
! TCTCAAATGGGTTCAACACA+TGG - contig451end:5820-5839 MsG0080048800.01.T01:intron 40.0%
! TTGATAATAGCAGTCTCCTC+GGG + contig451end:1039-1058 None:intergenic 40.0%
! TTTTCCAGAACTCCATCATC+CGG - contig451end:2236-2255 MsG0080048800.01.T01:intron 40.0%
! TTTTCTTTCTATTTGGCGGC+CGG + contig451end:6020-6039 None:intergenic 40.0%
! TTTTTCGTTGGGTTACAGGA+AGG - contig451end:7353-7372 MsG0080048800.01.T01:intron 40.0%
!! AAGTTATGTTTGGGTTGGCA+TGG + contig451end:890-909 None:intergenic 40.0%
!! ACATTGGCTCCCTAATTGAA+AGG - contig451end:2100-2119 MsG0080048800.01.T01:CDS 40.0%
!! AGTGTTGTTTCGTGCACATA+TGG + contig451end:1921-1940 None:intergenic 40.0%
!! AGTTGATGATGCTGTTCAAG+AGG - contig451end:513-532 MsG0080048800.01.T01:intron 40.0%
!! ATTTGCTCAATGGGCTACAA+TGG - contig451end:6861-6880 MsG0080048800.01.T01:CDS 40.0%
!! CACAGAAAGTATTGTCGCAA+AGG - contig451end:4003-4022 MsG0080048800.01.T01:intron 40.0%
!! TACATCTTCAAGTTGCTCAG+AGG + contig451end:5960-5979 None:intergenic 40.0%
!! TGCTCATTGGTGGATTAAAC+AGG - contig451end:7442-7461 MsG0080048800.01.T01:exon 40.0%
!! TGGTGTTATCGATCAAACCA+GGG - contig451end:693-712 MsG0080048800.01.T01:intron 40.0%
!!! GTGTTTTTTCCACTAGTGGA+CGG + contig451end:2287-2306 None:intergenic 40.0%
AAAGCGTGTTCGTACACAAG+AGG - contig451end:6113-6132 MsG0080048800.01.T01:intron 45.0%
AAAGGGAAAAGGGAGGACAT+TGG - contig451end:3082-3101 MsG0080048800.01.T01:intron 45.0%
AAATGGGTGGAGAGGAAGTA+AGG - contig451end:80-99 MsG0080048800.01.T01:intron 45.0%
AACATAATCAAGGAGACCCC+TGG + contig451end:713-732 None:intergenic 45.0%
AACATCGTCTCCTTCAAGTC+TGG - contig451end:6075-6094 MsG0080048800.01.T01:intron 45.0%
AAGTTCACACCTGAAACCAC+AGG - contig451end:2141-2160 MsG0080048800.01.T01:intron 45.0%
AATGATAGAGTGGTCTCAGG+AGG + contig451end:553-572 None:intergenic 45.0%
AATGGGTGGAGAGGAAGTAA+GGG - contig451end:81-100 MsG0080048800.01.T01:intron 45.0%
ACAATGCAACAATGAGGCGA+GGG - contig451end:2351-2370 MsG0080048800.01.T01:intron 45.0%
ACCAGCAGGACCAGATATAA+TGG - contig451end:5877-5896 MsG0080048800.01.T01:intron 45.0%
AGACATCATCTGAACCAACC+GGG + contig451end:1354-1373 None:intergenic 45.0%
AGCCAATGTAAAGGGAGAAG+TGG + contig451end:2089-2108 None:intergenic 45.0%
AGGTCTTGCCGTTATAGAGA+AGG + contig451end:2168-2187 None:intergenic 45.0%
AGGTGCACAGGTATACTTGT+TGG - contig451end:2794-2813 MsG0080048800.01.T01:intron 45.0%
ATGCAAAGAAATGGGTGGAG+AGG - contig451end:72-91 MsG0080048800.01.T01:intron 45.0%
ATTGGGATCGATCAAACCAG+CGG + contig451end:440-459 None:intergenic 45.0%
CAAAGTGGAATGATGTAGGC+AGG + contig451end:2017-2036 None:intergenic 45.0%
CACACTCACCAGAATAAGGT+TGG - contig451end:2495-2514 MsG0080048800.01.T01:intron 45.0%
CAGGATGGCAAATGACATGA+TGG + contig451end:2423-2442 None:intergenic 45.0%
CATTCACCTGCTTGTATCCT+TGG + contig451end:1113-1132 None:intergenic 45.0%
CCACAGGACCTTCTCTATAA+CGG - contig451end:2157-2176 MsG0080048800.01.T01:intron 45.0%
CCATTGTTCCAACACATCAG+GGG + contig451end:1395-1414 None:intergenic 45.0%
CGAGCACGCAATGTTATGTT+GGG + contig451end:1081-1100 None:intergenic 45.0%
CGGTGCAACATGAGAATAAC+AGG + contig451end:3399-3418 None:intergenic 45.0%
CTAGGCTCTCTAATTCCTAG+AGG - contig451end:3136-3155 MsG0080048800.01.T01:intron 45.0%
CTCCTCACATCGCATTCATT+TGG - contig451end:282-301 MsG0080048800.01.T01:intron 45.0%
CTGGAACCATTGAAGAAGTG+TGG + contig451end:7315-7334 None:intergenic 45.0%
CTTGAAGGAGACGATGTTTG+TGG + contig451end:6073-6092 None:intergenic 45.0%
GAAGACAGTGAGCATTTGGA+TGG + contig451end:174-193 None:intergenic 45.0%
GAATGCATGTGGAGTTTCCA+TGG + contig451end:2706-2725 None:intergenic 45.0%
GACAAACAGAGGAAGAGTGA+GGG + contig451end:2465-2484 None:intergenic 45.0%
GACCTTGCAGAAAAATGTGG+CGG - contig451end:6829-6848 MsG0080048800.01.T01:intron 45.0%
GAGGACCTTGCAGAAAAATG+TGG - contig451end:6826-6845 MsG0080048800.01.T01:intron 45.0%
GAGGTAAGGAATTGAGTGAC+GGG - contig451end:5082-5101 MsG0080048800.01.T01:intron 45.0%
GAGTCACATGAAAGACTAGG+AGG - contig451end:3606-3625 MsG0080048800.01.T01:intron 45.0%
GAGTTTGCCTGAGAGACATA+GGG + contig451end:5611-5630 None:intergenic 45.0%
GATGGCAAATGACATGATGG+CGG + contig451end:2420-2439 None:intergenic 45.0%
GCAAACAGATTAGAAAGGCC+AGG + contig451end:1542-1561 None:intergenic 45.0%
GCACTTAACATTTCCCTGGA+TGG - contig451end:1316-1335 MsG0080048800.01.T01:intron 45.0%
GCATACATACTTGAGGTGAG+GGG + contig451end:764-783 None:intergenic 45.0%
GCATTTGGATGGAATTGGAG+AGG + contig451end:163-182 None:intergenic 45.0%
GCCAATGTAAAGGGAGAAGT+GGG + contig451end:2088-2107 None:intergenic 45.0%
GGAAACGTCATTGTCACCAA+TGG + contig451end:1857-1876 None:intergenic 45.0%
GGAATGGCAGAAGTCATTGT+TGG + contig451end:7603-7622 None:intergenic 45.0%
GGCAATGGATACAGCATCTT+CGG + contig451end:5852-5871 None:intergenic 45.0%
GGTCGGGTTATTGATACCAT+TGG - contig451end:1838-1857 MsG0080048800.01.T01:CDS 45.0%
GGTGACAATGACGTTTCCTT+TGG - contig451end:1859-1878 MsG0080048800.01.T01:CDS 45.0%
GGTTATTCTGACAACAGAGG+TGG + contig451end:3212-3231 None:intergenic 45.0%
GTAGCCCATTGAGCAAATGT+GGG + contig451end:6859-6878 None:intergenic 45.0%
GTCCAAAAGCAGTTGGACAT+AGG - contig451end:3540-3559 MsG0080048800.01.T01:intron 45.0%
TACTAGTGGAAGAAGCCTCT+AGG + contig451end:3852-3871 None:intergenic 45.0%
TCATAGGTCAACATAGGTGG+TGG + contig451end:1812-1831 None:intergenic 45.0%
TCCATTATATCTGGTCCTGC+TGG + contig451end:5881-5900 None:intergenic 45.0%
TCCCACTTCTCCCTTTACAT+TGG - contig451end:2084-2103 MsG0080048800.01.T01:CDS 45.0%
TCTCAACCTATGCTCATTGG+TGG - contig451end:7432-7451 MsG0080048800.01.T01:exon 45.0%
TCTGCTGTGAAAGCTCATTG+TGG + contig451end:2313-2332 None:intergenic 45.0%
TCTGGGTTGCAGATGAATTG+TGG + contig451end:5349-5368 None:intergenic 45.0%
TCTGTTCTGTTCTGTTCTGG+GGG + contig451end:5220-5239 None:intergenic 45.0%
TGATTCTACAGATGAGGAGG+AGG + contig451end:5633-5652 None:intergenic 45.0%
TGCCACACAATGCAACAATG+AGG - contig451end:2345-2364 MsG0080048800.01.T01:intron 45.0%
TGGGAGTGGTTTAAAAGCTC+TGG + contig451end:2069-2088 None:intergenic 45.0%
TGTAGCCCATTGAGCAAATG+TGG + contig451end:6860-6879 None:intergenic 45.0%
TGTGTGGGTTCAATGAAGCA+TGG + contig451end:1982-2001 None:intergenic 45.0%
TTCTGGTGAGTGTGACATGT+CGG + contig451end:2489-2508 None:intergenic 45.0%
TTCTTATCCGAATGGGAAGG+GGG - contig451end:5165-5184 MsG0080048800.01.T01:intron 45.0%
TTGTGGGCAAGCAGATGTAT+GGG - contig451end:1252-1271 MsG0080048800.01.T01:intron 45.0%
TTTGTGGGCAAGCAGATGTA+TGG - contig451end:1251-1270 MsG0080048800.01.T01:intron 45.0%
! CATCATGTCATTTGCCATCC+TGG - contig451end:2421-2440 MsG0080048800.01.T01:intron 45.0%
! CGAGCAGTGATGTTAACTTG+TGG - contig451end:120-139 MsG0080048800.01.T01:intron 45.0%
! CTGGTTTGATCGATAACACC+AGG + contig451end:694-713 None:intergenic 45.0%
! GAAAGTACGGACACTAAAGG+GGG - contig451end:7059-7078 MsG0080048800.01.T01:CDS 45.0%
! GAAGTATCTGTAGGAAGTGC+AGG + contig451end:1006-1025 None:intergenic 45.0%
! GACCTATGTCCAACTGCTTT+TGG + contig451end:3545-3564 None:intergenic 45.0%
! GAGTTTTCAGATTCAGCAGG+AGG + contig451end:5578-5597 None:intergenic 45.0%
! GGAATTGGTGTCTTTGTTGG+AGG - contig451end:2828-2847 MsG0080048800.01.T01:intron 45.0%
! GGTGAGTTTTCAGATTCAGC+AGG + contig451end:5581-5600 None:intergenic 45.0%
! GGTGTTATCGATCAAACCAG+GGG - contig451end:694-713 MsG0080048800.01.T01:intron 45.0%
! GTGTGAGACATGCTTTTGCT+TGG - contig451end:4035-4054 MsG0080048800.01.T01:intron 45.0%
! GTTTCAGGTGTGAACTTGGA+TGG + contig451end:2138-2157 None:intergenic 45.0%
! TATTCAAGGGCTCCCCTTTT+TGG - contig451end:958-977 MsG0080048800.01.T01:intron 45.0%
! TGTGGTTTCAGGTGTGAACT+TGG + contig451end:2142-2161 None:intergenic 45.0%
! TTAGATTTTGTGGCAGGTGC+CGG - contig451end:3796-3815 MsG0080048800.01.T01:intron 45.0%
! TTTGGTGGTTGAGGTCAAAG+TGG + contig451end:2032-2051 None:intergenic 45.0%
!! AGTAGCTGGGAAGTATCTGT+AGG + contig451end:1015-1034 None:intergenic 45.0%
!! ATAACCGGATGATGGAGTTC+TGG + contig451end:2243-2262 None:intergenic 45.0%
!! ATTGGTGCTTTTGGTGGTTG+AGG + contig451end:2041-2060 None:intergenic 45.0%
!! CTGGTGTTATCGATCAAACC+AGG - contig451end:692-711 MsG0080048800.01.T01:intron 45.0%
!! CTTTTGGAGGTGGATGATGA+GGG + contig451end:666-685 None:intergenic 45.0%
!! GAGATGATGATGATGATGGG+CGG + contig451end:5387-5406 None:intergenic 45.0%
!! GGTGGATTAAACAGGCAGTT+CGG - contig451end:7450-7469 MsG0080048800.01.T01:exon 45.0%
!! TCTTCAAGTTGCTCAGAGGT+AGG + contig451end:5956-5975 None:intergenic 45.0%
!! TTTTGGAGGTGGATGATGAG+GGG + contig451end:665-684 None:intergenic 45.0%
!!! CTGGTTGGTATTGGTGCTTT+TGG + contig451end:2050-2069 None:intergenic 45.0%
!!! GGTGTTTTAGGACATGCATG+AGG - contig451end:3955-3974 MsG0080048800.01.T01:intron 45.0%
!!! GTTGGTATTGGTGCTTTTGG+TGG + contig451end:2047-2066 None:intergenic 45.0%
!!! GTTTTAGGACATGCATGAGG+AGG - contig451end:3958-3977 MsG0080048800.01.T01:intron 45.0%
!!! TGTACGAACACGCTTTTTCC+TGG + contig451end:6109-6128 None:intergenic 45.0%
AACCAACGCCTGTCCTTGAT+TGG - contig451end:479-498 MsG0080048800.01.T01:intron 50.0%
ACAACATCCCCCTTCCCATT+CGG + contig451end:5175-5194 None:intergenic 50.0%
ACATCAGGGGAACCATACCA+TGG + contig451end:1382-1401 None:intergenic 50.0%
ACATTGCGTGCTCGCTTTGT+TGG - contig451end:1087-1106 MsG0080048800.01.T01:intron 50.0%
AGAAGCCTCTAGGTCAGTCT+TGG + contig451end:3842-3861 None:intergenic 50.0%
AGAGAAGGTCCTGTGGTTTC+AGG + contig451end:2153-2172 None:intergenic 50.0%
AGATCTACTCGGCCTTTGAC+TGG + contig451end:4119-4138 None:intergenic 50.0%
AGCAGTTGGACATAGGTCTG+TGG - contig451end:3547-3566 MsG0080048800.01.T01:intron 50.0%
AGGGAAGCTTTCACTTCCCA+TGG - contig451end:2686-2705 MsG0080048800.01.T01:intron 50.0%
AGTCTACTATCGCGGCATCA+TGG - contig451end:6281-6300 MsG0080048800.01.T01:CDS 50.0%
ATCGATCCCAATTACTGGCG+TGG - contig451end:448-467 MsG0080048800.01.T01:intron 50.0%
ATTGAACCCACACAGCACCT+CGG - contig451end:1988-2007 MsG0080048800.01.T01:CDS 50.0%
CACAATGCAACAATGAGGCG+AGG - contig451end:2350-2369 MsG0080048800.01.T01:intron 50.0%
CAGGGGTTAGGGAACAATTC+CGG - contig451end:322-341 MsG0080048800.01.T01:intron 50.0%
CCAATCAGGTCTTGACACCT+TGG + contig451end:407-426 None:intergenic 50.0%
CCAGCCCACATTTGCTCAAT+GGG - contig451end:6852-6871 MsG0080048800.01.T01:CDS 50.0%
CCCCTGATGTGTTGGAACAA+TGG - contig451end:1392-1411 MsG0080048800.01.T01:intron 50.0%
CCGTTATAGAGAAGGTCCTG+TGG + contig451end:2160-2179 None:intergenic 50.0%
CCTCATCATCCACCTCCAAA+AGG - contig451end:664-683 MsG0080048800.01.T01:intron 50.0%
CGACAAACAGAGGAAGAGTG+AGG + contig451end:2466-2485 None:intergenic 50.0%
CGATCAAACCAGCGGCATTT+CGG + contig451end:432-451 None:intergenic 50.0%
CGCCTCATTGTTGCATTGTG+TGG + contig451end:2350-2369 None:intergenic 50.0%
CGGTGCACTTAACATTTCCC+TGG - contig451end:1312-1331 MsG0080048800.01.T01:intron 50.0%
CGTGCACATATGGCAGATCT+TGG + contig451end:1911-1930 None:intergenic 50.0%
CTCAACGGTTAGATCAGCGA+TGG - contig451end:4737-4756 MsG0080048800.01.T01:intron 50.0%
GAAGAGTCAGAGCTTCTGGA+AGG - contig451end:6044-6063 MsG0080048800.01.T01:intron 50.0%
GACAACCAAGACTGACCTAG+AGG - contig451end:3834-3853 MsG0080048800.01.T01:intron 50.0%
GACATCATCTGAACCAACCG+GGG + contig451end:1353-1372 None:intergenic 50.0%
GAGACTAACCGGGAGAATGA+CGG + contig451end:232-251 None:intergenic 50.0%
GATGCTGTATCCATTGCCAC+TGG - contig451end:5854-5873 MsG0080048800.01.T01:intron 50.0%
GCGAGCACGCAATGTTATGT+TGG + contig451end:1082-1101 None:intergenic 50.0%
GGAGTGGTAAACTCCATCCA+GGG + contig451end:1332-1351 None:intergenic 50.0%
GGAGTTTGCCTGAGAGACAT+AGG + contig451end:5612-5631 None:intergenic 50.0%
GGGTGAGATGAGATGAGATG+AGG + contig451end:5143-5162 None:intergenic 50.0%
GTATGGTTCCCCTGATGTGT+TGG - contig451end:1384-1403 MsG0080048800.01.T01:intron 50.0%
TACCAATCAAGGACAGGCGT+TGG + contig451end:484-503 None:intergenic 50.0%
TATGCAGTGAAGCAAGAGCC+AGG + contig451end:2442-2461 None:intergenic 50.0%
TCACATTAGCCCCAACCAAG+AGG - contig451end:5907-5926 MsG0080048800.01.T01:intron 50.0%
TGACACCTTGGCAACAACTG+TGG + contig451end:395-414 None:intergenic 50.0%
TGATGCTGTTCAAGAGGCCA+TGG - contig451end:519-538 MsG0080048800.01.T01:intron 50.0%
TGCCGTCACACTAACGATTG+TGG + contig451end:6375-6394 None:intergenic 50.0%
TGGGATGAGTCTGCAAGATC+TGG - contig451end:7001-7020 MsG0080048800.01.T01:CDS 50.0%
TGTAAAGGGAGAAGTGGGAG+TGG + contig451end:2083-2102 None:intergenic 50.0%
TGTGGGCAAGCAGATGTATG+GGG - contig451end:1253-1272 MsG0080048800.01.T01:intron 50.0%
TGTTGGCCAAGGATACAAGC+AGG - contig451end:1104-1123 MsG0080048800.01.T01:intron 50.0%
! AGAGTGCCACGCCAGTAATT+GGG + contig451end:457-476 None:intergenic 50.0%
! ATAACACCAGGGACGCCTTT+TGG + contig451end:682-701 None:intergenic 50.0%
! CAACATTGGAGTGCCAAGTG+AGG - contig451end:1947-1966 MsG0080048800.01.T01:CDS 50.0%
! CCAAGGTGTCAAGACCTGAT+TGG - contig451end:404-423 MsG0080048800.01.T01:intron 50.0%
! TCATTGATTGGTCACTCGGC+TGG - contig451end:568-587 MsG0080048800.01.T01:intron 50.0%
! TCCAGAAGCTCTGACTCTTC+TGG + contig451end:6044-6063 None:intergenic 50.0%
! TTGAGGTGAGGGGTGTAAAC+AGG + contig451end:754-773 None:intergenic 50.0%
! TTTCCACTAGTGGACGGTAC+TGG + contig451end:2281-2300 None:intergenic 50.0%
!! AAGAGTGCCACGCCAGTAAT+TGG + contig451end:458-477 None:intergenic 50.0%
!! AGGTCAACATAGGTGGTGGA+TGG + contig451end:1808-1827 None:intergenic 50.0%
!! ATGATGATGATGATGGGCGG+TGG + contig451end:5384-5403 None:intergenic 50.0%
!! CCTTTTGGAGGTGGATGATG+AGG + contig451end:667-686 None:intergenic 50.0%
!! CTCAATGGGCTACAATGGCA+GGG - contig451end:6866-6885 MsG0080048800.01.T01:CDS 50.0%
!! GGTCAACATAGGTGGTGGAT+GGG + contig451end:1807-1826 None:intergenic 50.0%
!! GTCAACATAGGTGGTGGATG+GGG + contig451end:1806-1825 None:intergenic 50.0%
!! TCAACATAGGTGGTGGATGG+GGG + contig451end:1805-1824 None:intergenic 50.0%
!! TCAATGGGCTACAATGGCAG+GGG - contig451end:6867-6886 MsG0080048800.01.T01:CDS 50.0%
!! TGATGATGATGATGGGCGGT+GGG + contig451end:5383-5402 None:intergenic 50.0%
!! TGGTTGGTTTGGGAGAGACT+AGG - contig451end:3118-3137 MsG0080048800.01.T01:intron 50.0%
!!! AACACGCTTTTTCCTGGTGG+TGG + contig451end:6103-6122 None:intergenic 50.0%
!!! ACGAACACGCTTTTTCCTGG+TGG + contig451end:6106-6125 None:intergenic 50.0%
ACCTTGGCCCTATGTCTCTC+AGG - contig451end:5601-5620 MsG0080048800.01.T01:intron 55.0%
ACTAACCGGGAGAATGACGG+CGG + contig451end:229-248 None:intergenic 55.0%
AGACCAGTACCGTCCACTAG+TGG - contig451end:2275-2294 MsG0080048800.01.T01:intron 55.0%
AGTCTCCTCGGGAAGTAGCT+GGG + contig451end:1028-1047 None:intergenic 55.0%
CAAGCAGATGTATGGGGCGA+TGG - contig451end:1259-1278 MsG0080048800.01.T01:intron 55.0%
CAGTGAAGCAAGAGCCAGGA+TGG + contig451end:2438-2457 None:intergenic 55.0%
CCCATTGAGCAAATGTGGGC+TGG + contig451end:6855-6874 None:intergenic 55.0%
CGGAATTGTTCCCTAACCCC+TGG + contig451end:324-343 None:intergenic 55.0%
CGTGTCCACAGTTGTTGCCA+AGG - contig451end:387-406 MsG0080048800.01.T01:intron 55.0%
CTCCAGCTTCTGGTAGTCAC+CGG + contig451end:344-363 None:intergenic 55.0%
GACATGTCGGCGACAAACAG+AGG + contig451end:2476-2495 None:intergenic 55.0%
GAGTCTGCAAGATCTGGTCC+AGG - contig451end:7007-7026 MsG0080048800.01.T01:CDS 55.0%
GCCAGAAGAGTCAGAGCTTC+TGG - contig451end:6040-6059 MsG0080048800.01.T01:intron 55.0%
GCCAGCCCACATTTGCTCAA+TGG - contig451end:6851-6870 MsG0080048800.01.T01:CDS 55.0%
GGATGGAGTTTACCACTCCC+CGG - contig451end:1333-1352 MsG0080048800.01.T01:intron 55.0%
GGCTGCTGCAAAGCTTGCAA+AGG - contig451end:5715-5734 MsG0080048800.01.T01:intron 55.0%
GGGAGTGGTAAACTCCATCC+AGG + contig451end:1333-1352 None:intergenic 55.0%
GGTGGGTAGGGATTCTGTCT+GGG + contig451end:5366-5385 None:intergenic 55.0%
TACTTCCCAGCTACTTCCCG+AGG - contig451end:1020-1039 MsG0080048800.01.T01:intron 55.0%
TCAAGTCTGGATCCACCACC+AGG - contig451end:6088-6107 MsG0080048800.01.T01:intron 55.0%
TCAGAGTTGCCTCCAGCTTC+TGG + contig451end:354-373 None:intergenic 55.0%
TCAGGGGTGGAAGGAAGTTG+CGG + contig451end:5791-5810 None:intergenic 55.0%
TGAGAGACATAGGGCCAAGG+TGG + contig451end:5602-5621 None:intergenic 55.0%
TGGCGGAAGTGAACGATCAG+CGG + contig451end:2403-2422 None:intergenic 55.0%
TTCCGGTGACTACCAGAAGC+TGG - contig451end:339-358 MsG0080048800.01.T01:intron 55.0%
TTGAACCCACACAGCACCTC+GGG - contig451end:1989-2008 MsG0080048800.01.T01:CDS 55.0%
! GGAAGTGCAGGCTCAGCATT+TGG + contig451end:994-1013 None:intergenic 55.0%
! GGCCGCCACATTTTTCTGCA+AGG + contig451end:6834-6853 None:intergenic 55.0%
! TTGATTGGTCACTCGGCTGG+AGG - contig451end:571-590 MsG0080048800.01.T01:intron 55.0%
!! ACTAAAGGGGGCACCACACA+CGG - contig451end:7071-7090 MsG0080048800.01.T01:CDS 55.0%
!! ACTAGTGGACGGTACTGGTC+TGG + contig451end:2276-2295 None:intergenic 55.0%
!! ATGATGATGGGCGGTGGGTA+GGG + contig451end:5378-5397 None:intergenic 55.0%
!! CTCAGGAGGTGCTAACTCCA+TGG + contig451end:539-558 None:intergenic 55.0%
!! GCTCAATGGGCTACAATGGC+AGG - contig451end:6865-6884 MsG0080048800.01.T01:CDS 55.0%
!! GGGGTTGGTACTCCAGTCAA+AGG - contig451end:4104-4123 MsG0080048800.01.T01:intron 55.0%
!! GGTGGTGGATCCAGACTTGA+AGG + contig451end:6088-6107 None:intergenic 55.0%
!! TTTGTGGCAGGTGCCGGATA+AGG - contig451end:3802-3821 MsG0080048800.01.T01:intron 55.0%
ATCTGGTCCTGCTGGTCCAG+TGG + contig451end:5873-5892 None:intergenic 60.0%
ATGATGTAGGCAGGAGCCCG+AGG + contig451end:2008-2027 None:intergenic 60.0%
ATGGCAGAGCTCGCCTCACT+TGG + contig451end:1963-1982 None:intergenic 60.0%
CAGTCTCCTCGGGAAGTAGC+TGG + contig451end:1029-1048 None:intergenic 60.0%
CATCTGAACCAACCGGGGAG+TGG + contig451end:1348-1367 None:intergenic 60.0%
CGGAAGTGAACGATCAGCGG+CGG + contig451end:2400-2419 None:intergenic 60.0%
CGGTGACTACCAGAAGCTGG+AGG - contig451end:342-361 MsG0080048800.01.T01:intron 60.0%
CGGTGGGTAGGGATTCTGTC+TGG + contig451end:5367-5386 None:intergenic 60.0%
CTAACCGGGAGAATGACGGC+GGG + contig451end:228-247 None:intergenic 60.0%
CTGCACCTCTTACAAGCCCG+CGG + contig451end:7382-7401 None:intergenic 60.0%
GAAGGACGAGCAAGAGAGGG+AGG + contig451end:1783-1802 None:intergenic 60.0%
GACGGCGGGTCGATAGTTGT+TGG + contig451end:214-233 None:intergenic 60.0%
GCCTGAGAGACATAGGGCCA+AGG + contig451end:5605-5624 None:intergenic 60.0%
GCGGCATTTCGGAGCCAATC+AGG + contig451end:421-440 None:intergenic 60.0%
GGAGTTTACCACTCCCCGGT+TGG - contig451end:1337-1356 MsG0080048800.01.T01:intron 60.0%
GGCGGGTCGATAGTTGTTGG+TGG + contig451end:211-230 None:intergenic 60.0%
GGGGAAGGACGAGCAAGAGA+GGG + contig451end:1786-1805 None:intergenic 60.0%
GGGTTACAGGAAGGATGCCG+CGG - contig451end:7362-7381 MsG0080048800.01.T01:intron 60.0%
GGTTACAGGAAGGATGCCGC+GGG - contig451end:7363-7382 MsG0080048800.01.T01:intron 60.0%
TCCATTGCCACTGGACCAGC+AGG - contig451end:5863-5882 MsG0080048800.01.T01:intron 60.0%
TCCTGCTGGTCCAGTGGCAA+TGG + contig451end:5867-5886 None:intergenic 60.0%
TGTCAACGCGCCGCCTTATC+CGG + contig451end:3818-3837 None:intergenic 60.0%
TTGGTCACTCGGCTGGAGGA+TGG - contig451end:575-594 MsG0080048800.01.T01:intron 60.0%
! ACACCAGGGACGCCTTTTGG+AGG + contig451end:679-698 None:intergenic 60.0%
! CGTGCTCGCTTTGTTGGCCA+AGG - contig451end:1093-1112 MsG0080048800.01.T01:intron 60.0%
! GATTGGCTCCGAAATGCCGC+TGG - contig451end:421-440 MsG0080048800.01.T01:intron 60.0%
!! CATAGGTGGTGGATGGGGGA+AGG + contig451end:1801-1820 None:intergenic 60.0%
!! GATGATGATGGGCGGTGGGT+AGG + contig451end:5379-5398 None:intergenic 60.0%
GGATGCCGCGGGCTTGTAAG+AGG - contig451end:7374-7393 MsG0080048800.01.T01:intron 65.0%
GGGGGAAGGACGAGCAAGAG+AGG + contig451end:1787-1806 None:intergenic 65.0%
GGGGTGGAAGGAAGTTGCGG+TGG + contig451end:5788-5807 None:intergenic 65.0%
TCGACCCGCCGTCATTCTCC+CGG - contig451end:221-240 MsG0080048800.01.T01:CDS 65.0%
!! AGGAGCCCGAGGTGCTGTGT+GGG + contig451end:1997-2016 None:intergenic 65.0%
!! CCACCTCCAAAAGGCGTCCC+TGG - contig451end:673-692 MsG0080048800.01.T01:intron 65.0%
!! CCAGGGACGCCTTTTGGAGG+TGG + contig451end:676-695 None:intergenic 65.0%
!! GTGGCAGGTGCCGGATAAGG+CGG - contig451end:3805-3824 MsG0080048800.01.T01:intron 65.0%
!! CAGGAGCCCGAGGTGCTGTG+TGG + contig451end:1998-2017 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
contig451end gene 1 7631 1 ID=MsG0080048800.01;
contig451end mRNA 1 7631 1 ID=MsG0080048800.01.T01;Parent=MsG0080048800.01
contig451end CDS 121 261 121 ID=MsG0080048800.01.T01.cds;Parent=MsG0080048800.01.T01
contig451end exon 121 261 121 ID=MsG0080048800.01.T01.exon;Parent=MsG0080048800.01.T01
contig451end CDS 604 636 604 ID=MsG0080048800.01.T01.cds;Parent=MsG0080048800.01.T01
contig451end exon 604 636 604 ID=MsG0080048800.01.T01.exon;Parent=MsG0080048800.01.T01
contig451end CDS 744 833 744 ID=MsG0080048800.01.T01.cds;Parent=MsG0080048800.01.T01
contig451end exon 744 833 744 ID=MsG0080048800.01.T01.exon;Parent=MsG0080048800.01.T01
contig451end CDS 1399 1444 1399 ID=MsG0080048800.01.T01.cds;Parent=MsG0080048800.01.T01
contig451end exon 1399 1444 1399 ID=MsG0080048800.01.T01.exon;Parent=MsG0080048800.01.T01
contig451end CDS 1513 2134 1513 ID=MsG0080048800.01.T01.cds;Parent=MsG0080048800.01.T01
contig451end exon 1513 2134 1513 ID=MsG0080048800.01.T01.exon;Parent=MsG0080048800.01.T01
contig451end CDS 4783 4843 4783 ID=MsG0080048800.01.T01.cds;Parent=MsG0080048800.01.T01
contig451end exon 4783 4843 4783 ID=MsG0080048800.01.T01.exon;Parent=MsG0080048800.01.T01
contig451end CDS 5253 5388 5253 ID=MsG0080048800.01.T01.cds;Parent=MsG0080048800.01.T01
contig451end exon 5253 5388 5253 ID=MsG0080048800.01.T01.exon;Parent=MsG0080048800.01.T01
contig451end CDS 6249 6382 6249 ID=MsG0080048800.01.T01.cds;Parent=MsG0080048800.01.T01
contig451end exon 6249 6382 6249 ID=MsG0080048800.01.T01.exon;Parent=MsG0080048800.01.T01
contig451end CDS 6507 6666 6507 ID=MsG0080048800.01.T01.cds;Parent=MsG0080048800.01.T01
contig451end exon 6507 6666 6507 ID=MsG0080048800.01.T01.exon;Parent=MsG0080048800.01.T01
contig451end CDS 6838 7307 6838 ID=MsG0080048800.01.T01.cds;Parent=MsG0080048800.01.T01
contig451end exon 6838 7307 6838 ID=MsG0080048800.01.T01.exon;Parent=MsG0080048800.01.T01
contig451end CDS 7390 7560 7390 ID=MsG0080048800.01.T01.cds;Parent=MsG0080048800.01.T01
contig451end exon 7390 7631 7390 ID=MsG0080048800.01.T01.exon;Parent=MsG0080048800.01.T01
Gene Sequence

>MsG0080048800.01.T01

ATGCAAAGAAATGGGTGGAGAGGAAGTAAGGGAAGCAGAGCGAGCGAGCGAGCAGTGATGTTAACTTGTGGAGCAAAATGGATGTCAGCCTCTCCAATTCCATCCAAATGCTCACTGTCTTCTTCTTCATCTGCTTCCACCAACAACTATCGACCCGCCGTCATTCTCCCGGGGTTAGGGAACAATTCCGGTGACTACCAGAAGCTGGAGGCAACTCTGAACAATAACTACGGCGTGTCCACAGTTGTTGCCAAGGTGTCAAGACCTGATTGGCTCCGAAATGCCGCTGGTTTGATCGATCCCAATTACTGGCGTGGCACTCTTCAACCAACGCCTGTCCTTGATTGGTATTTGAAGAGAGTTGATGATGCTGTTCAAGAGGCCATGGAGTTAGCACCTCCTGAGACCACTCTATCATTGATTGGTCACTCGGCTGGAGGATGGCTTGCGCGTCTGTATATGCAGCAATTTGGGGTGTCCAATATATCATTGTTATTAACTCTTGGAACCCCTCATCATCCACCTCCAAAAGGCGTCCCTGGTGTTATCGATCAAACCAGGGGTCTCCTTGATTATGTTCAACAATATTGCTCTAAACCTGTTTACACCCCTCACCTCAAGTATGTATGCATAGCAGGAAGGGCTCCCCTTTTTGGAAACTCAAATCCAAATGCTGAGCCTGCACTTCCTACAGATACTTCCCAGCTACTTCCCGAGGAGACTGCTATTATCAAAGCTGCAACCACTTCTTCACCCAACATAACATTGCGTGCTCGCTTTGTTGGCCAAGGATACAAGCAGGTTTGTGGGCAAGCAGATGTATGGGGCGATGGTGTTGTGCCAGAAGTATCAGCTCATCTTGACGGTGCACTTAACATTTCCCTGGATGGAGTTTACCACTCCCCGGTTGGTTCAGATGATGTCTTTAGACCATGAACTCCATCATCCGGTTATTATGACGAAACCAGACCAGTACCGTCCACTAGTGGAAAAAACACATTCCACAATGAGCTTTCACAGCAGAGATTCTCTGCTTTGCCACACAATGCAACAATGAGGCGAGGGAGTCACGATTTAGGTGCACAGGTATACTTGTTGGAGATAGAACTTGGAATTGGTGTCTTTGTTGGAGCACCCAAAACAACAATTACAAGACACTGTATTTTGTCTTCTTCAACAACGGCACTCCTTGATTTCAAATTTGATGCTCCTCCTGCTGAATCTGAAAACTCACCACCTTGGCCCTATGTCTCTCAGGCAAACTCCTCCTCCTCATCTGTAGAATCACTTCTTACTAGTGAAGACGCTGTTATAGCTGCTGCTGCTTCTGAAGCTCTTACTCTTGCTAAGGCTGCTGCAAAGCTTGCAAAGGATGCTACTCTCTTATTCAATAACAACCCCCCACAACATAATCAACAACCACCGCAACTTCCTTCCACCCCTGATAATTTACTTCTCAAATGGGTTCAACACATGGAAGCAGCCGAAGATGCTGTATCCATTGCCACTGGACCAGCAGGACCAGATATAATGGAACATCTTCACATTAGCCCCAACCAAGAGGATGACTTTAATGATGTCGACGAGCCTACCTCTGAGCAACTTGAAGATGTAGAGGAACAACTTTTCGATACTAGTATAGATGCAAGATCCGGCCGCCAAATAGAAAGAAAAGCCAGAAGAGTCAGAGCTTCTGGAAGGCTGCCACAAACATCGTCTCCTTCAAGTCTGGATCCACCACCAGGAAAAAGCGTGCTTCTCACTCCATCCGAAGAAATTAAGTTCTCTGAAGGAATACAGGACCTCATAAAGCTCGAAAAACTTCAAGAGGACCTTGCAGAAAAATGTGGCGGCCAGCCCACATTTGCTCAATGGGCTACAATGGCAGGGGGATCTGGGATGAGTCTGCAAGATCTGGTCCAGGAAGGATGCCGCGGGCTTGTAAGAGGTGCAGAGAAGTATGATGCTTCTAAGGGTTTTAAGTTCTCAACCTATGCTCATTGGTGGATTAAACAGGCAGTTCGGAAATCACTTTCTGTTCAGTCAAGGACTATTCGCTTGCCA

Protein sequence

>MsG0080048800.01.T01

MQRNGWRGSKGSRASERAVMLTCGAKWMSASPIPSKCSLSSSSSASTNNYRPAVILPGLGNNSGDYQKLEATLNNNYGVSTVVAKVSRPDWLRNAAGLIDPNYWRGTLQPTPVLDWYLKRVDDAVQEAMELAPPETTLSLIGHSAGGWLARLYMQQFGVSNISLLLTLGTPHHPPPKGVPGVIDQTRGLLDYVQQYCSKPVYTPHLKYVCIAGRAPLFGNSNPNAEPALPTDTSQLLPEETAIIKAATTSSPNITLRARFVGQGYKQVCGQADVWGDGVVPEVSAHLDGALNISLDGVYHSPVGSDDVFRP*TPSSGYYDETRPVPSTSGKNTFHNELSQQRFSALPHNATMRRGSHDLGAQVYLLEIELGIGVFVGAPKTTITRHCILSSSTTALLDFKFDAPPAESENSPPWPYVSQANSSSSSVESLLTSEDAVIAAAASEALTLAKAAAKLAKDATLLFNNNPPQHNQQPPQLPSTPDNLLLKWVQHMEAAEDAVSIATGPAGPDIMEHLHISPNQEDDFNDVDEPTSEQLEDVEEQLFDTSIDARSGRQIERKARRVRASGRLPQTSSPSSLDPPPGKSVLLTPSEEIKFSEGIQDLIKLEKLQEDLAEKCGGQPTFAQWATMAGGSGMSLQDLVQEGCRGLVRGAEKYDASKGFKFSTYAHWWIKQAVRKSLSVQSRTIRLP