Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880047681.01.T01 | XP_003610487.1 | 92 | 225 | 10 | 4 | 1 | 225 | 1 | 217 | 5.67E-132 | 380 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880047681.01.T01 | G7JKF7 | 92.000 | 225 | 10 | 4 | 1 | 225 | 1 | 217 | 2.71e-132 | 380 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047815.01 | MsG0880047681.01 | 0.817731 | 2.831730e-52 | 2.078947e-49 |
| MsG0080048905.01 | MsG0880047681.01 | 0.813275 | 2.778968e-51 | 1.806724e-48 |
| MsG0180001293.01 | MsG0880047681.01 | 0.800892 | 1.164285e-48 | 5.484350e-46 |
| MsG0180001588.01 | MsG0880047681.01 | 0.826420 | 2.739854e-54 | 2.568249e-51 |
| MsG0180001719.01 | MsG0880047681.01 | 0.837651 | 4.584752e-57 | 5.995296e-54 |
| MsG0880045356.01 | MsG0880047681.01 | 0.812993 | 3.204530e-51 | 2.067605e-48 |
| MsG0880045584.01 | MsG0880047681.01 | 0.805571 | 1.251795e-49 | 6.645208e-47 |
| MsG0880045612.01 | MsG0880047681.01 | 0.811399 | 7.138917e-51 | 4.414642e-48 |
| MsG0880045647.01 | MsG0880047681.01 | 0.839090 | 1.950557e-57 | 2.665084e-54 |
| MsG0880046905.01 | MsG0880047681.01 | 0.805676 | 1.190119e-49 | 6.334986e-47 |
| MsG0880047414.01 | MsG0880047681.01 | 0.810697 | 1.013135e-50 | 6.149636e-48 |
| MsG0880047649.01 | MsG0880047681.01 | 0.818994 | 1.465751e-52 | 1.114283e-49 |
| MsG0180003857.01 | MsG0880047681.01 | 0.816541 | 5.244631e-52 | 3.726582e-49 |
| MsG0180003905.01 | MsG0880047681.01 | 0.808168 | 3.536627e-50 | 2.007937e-47 |
| MsG0180004120.01 | MsG0880047681.01 | 0.831383 | 1.722446e-55 | 1.866117e-52 |
| MsG0180004185.01 | MsG0880047681.01 | 0.800504 | 1.397068e-48 | 6.515903e-46 |
| MsG0180004652.01 | MsG0880047681.01 | 0.800782 | 1.226474e-48 | 5.760544e-46 |
| MsG0180004828.01 | MsG0880047681.01 | 0.811231 | 7.762704e-51 | 4.779054e-48 |
| MsG0180005325.01 | MsG0880047681.01 | 0.819044 | 1.428121e-52 | 1.087089e-49 |
| MsG0180005655.01 | MsG0880047681.01 | 0.815879 | 7.373746e-52 | 5.145374e-49 |
| MsG0180006183.01 | MsG0880047681.01 | 0.813341 | 2.688165e-51 | 1.750882e-48 |
| MsG0780040459.01 | MsG0880047681.01 | 0.823721 | 1.188980e-53 | 1.032142e-50 |
| MsG0780040554.01 | MsG0880047681.01 | 0.806586 | 7.656822e-50 | 4.171540e-47 |
| MsG0780040641.01 | MsG0880047681.01 | 0.805336 | 1.402072e-49 | 7.398248e-47 |
| MsG0780040899.01 | MsG0880047681.01 | 0.821166 | 4.664580e-53 | 3.766343e-50 |
| MsG0780041820.01 | MsG0880047681.01 | 0.843645 | 1.233945e-58 | 1.943412e-55 |
| MsG0880043684.01 | MsG0880047681.01 | 0.835953 | 1.242441e-56 | 1.542932e-53 |
| MsG0880043714.01 | MsG0880047681.01 | 0.810141 | 1.335667e-50 | 7.988640e-48 |
| MsG0380012118.01 | MsG0880047681.01 | 0.810196 | 1.299816e-50 | 7.785103e-48 |
| MsG0380014542.01 | MsG0880047681.01 | 0.849334 | 3.456193e-60 | 6.530808e-57 |
| MsG0380014544.01 | MsG0880047681.01 | 0.856866 | 2.406966e-62 | 5.826068e-59 |
| MsG0380014666.01 | MsG0880047681.01 | 0.814356 | 1.606253e-51 | 1.075378e-48 |
| MsG0680031356.01 | MsG0880047681.01 | 0.815489 | 9.006738e-52 | 6.218810e-49 |
| MsG0480018767.01 | MsG0880047681.01 | 0.819632 | 1.048915e-52 | 8.115178e-50 |
| MsG0480020398.01 | MsG0880047681.01 | 0.819046 | 1.426673e-52 | 1.086050e-49 |
| MsG0480020937.01 | MsG0880047681.01 | 0.824988 | 5.988668e-54 | 5.389286e-51 |
| MsG0480021100.01 | MsG0880047681.01 | 0.820848 | 5.521236e-53 | 4.418868e-50 |
| MsG0480021456.01 | MsG0880047681.01 | 0.829398 | 5.264261e-55 | 5.381770e-52 |
| MsG0480021486.01 | MsG0880047681.01 | 0.829331 | 5.465018e-55 | 5.576557e-52 |
| MsG0480021740.01 | MsG0880047681.01 | 0.824763 | 6.767525e-54 | 6.051317e-51 |
| MsG0480021773.01 | MsG0880047681.01 | 0.854166 | 1.475194e-61 | 3.265776e-58 |
| MsG0480021902.01 | MsG0880047681.01 | 0.840165 | 1.024670e-57 | 1.447430e-54 |
| MsG0480022307.01 | MsG0880047681.01 | 0.828889 | 6.994592e-55 | 7.043416e-52 |
| MsG0480022378.01 | MsG0880047681.01 | 0.853200 | 2.795854e-61 | 5.993059e-58 |
| MsG0480023426.01 | MsG0880047681.01 | 0.819194 | 1.320260e-52 | 1.009066e-49 |
| MsG0480023626.01 | MsG0880047681.01 | 0.800997 | 1.108339e-48 | 5.234838e-46 |
| MsG0480023842.01 | MsG0880047681.01 | 0.828303 | 9.688765e-55 | 9.592010e-52 |
| MsG0480023913.01 | MsG0880047681.01 | 0.805736 | 1.155834e-49 | 6.162425e-47 |
| MsG0480024019.01 | MsG0880047681.01 | 0.841098 | 5.838611e-58 | 8.487775e-55 |
| MsG0580024276.01 | MsG0880047681.01 | 0.842279 | 2.849971e-58 | 4.299492e-55 |
| MsG0580025504.01 | MsG0880047681.01 | 0.811012 | 8.659729e-51 | 5.301173e-48 |
| MsG0380015340.01 | MsG0880047681.01 | 0.822057 | 2.902967e-53 | 2.403375e-50 |
| MsG0380015402.01 | MsG0880047681.01 | 0.809184 | 2.145450e-50 | 1.251175e-47 |
| MsG0380015552.01 | MsG0880047681.01 | 0.812513 | 4.081546e-51 | 2.600342e-48 |
| MsG0380015656.01 | MsG0880047681.01 | 0.840844 | 6.808257e-58 | 9.820957e-55 |
| MsG0380015954.01 | MsG0880047681.01 | 0.825121 | 5.571963e-54 | 5.033271e-51 |
| MsG0380016027.01 | MsG0880047681.01 | 0.816678 | 4.885931e-52 | 3.484827e-49 |
| MsG0380016819.01 | MsG0880047681.01 | 0.830632 | 2.633306e-55 | 2.790172e-52 |
| MsG0380017416.01 | MsG0880047681.01 | 0.830558 | 2.745235e-55 | 2.902309e-52 |
| MsG0380017696.01 | MsG0880047681.01 | 0.851050 | 1.141956e-60 | 2.282206e-57 |
| MsG0380017932.01 | MsG0880047681.01 | 0.802712 | 4.925719e-49 | 2.429800e-46 |
| MsG0480018228.01 | MsG0880047681.01 | 0.861126 | 1.276980e-63 | 3.574389e-60 |
| MsG0580028927.01 | MsG0880047681.01 | 0.827194 | 1.790214e-54 | 1.716070e-51 |
| MsG0580028955.01 | MsG0880047681.01 | 0.804727 | 1.880555e-49 | 9.769363e-47 |
| MsG0580030141.01 | MsG0880047681.01 | 0.816933 | 4.283296e-52 | 3.076573e-49 |
| MsG0280006909.01 | MsG0880047681.01 | 0.806970 | 6.350724e-50 | 3.494484e-47 |
| MsG0280007695.01 | MsG0880047681.01 | 0.848074 | 7.725457e-60 | 1.400916e-56 |
| MsG0780036553.01 | MsG0880047681.01 | 0.822978 | 1.773937e-53 | 1.507748e-50 |
| MsG0780038736.01 | MsG0880047681.01 | 0.831302 | 1.803020e-55 | 1.948577e-52 |
| MsG0780039536.01 | MsG0880047681.01 | 0.803487 | 3.405515e-49 | 1.713515e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880047681.01.T01 | MTR_4g132760 | 92.000 | 225 | 10 | 4 | 1 | 225 | 1 | 217 | 6.86e-136 | 380 |
| MsG0880047681.01.T01 | MTR_2g025080 | 54.327 | 208 | 63 | 7 | 1 | 198 | 1 | 186 | 3.88e-56 | 177 |
| MsG0880047681.01.T01 | MTR_8g013650 | 83.673 | 49 | 8 | 0 | 177 | 225 | 186 | 234 | 2.44e-26 | 102 |
| MsG0880047681.01.T01 | MTR_7g056407 | 44.231 | 104 | 39 | 2 | 140 | 225 | 237 | 339 | 9.00e-21 | 89.4 |
| MsG0880047681.01.T01 | MTR_3g065180 | 60.000 | 50 | 20 | 0 | 176 | 225 | 291 | 340 | 5.28e-17 | 79.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880047681.01.T01 | AT4G03965 | 47.679 | 237 | 84 | 7 | 1 | 225 | 1 | 209 | 8.04e-58 | 182 |
| MsG0880047681.01.T01 | AT4G22250 | 48.131 | 214 | 80 | 7 | 21 | 225 | 23 | 214 | 3.17e-53 | 171 |
| MsG0880047681.01.T01 | AT1G62370 | 40.851 | 235 | 98 | 8 | 1 | 225 | 1 | 204 | 5.29e-44 | 147 |
| MsG0880047681.01.T01 | AT3G25030 | 53.448 | 116 | 46 | 2 | 117 | 225 | 96 | 210 | 6.59e-35 | 124 |
| MsG0880047681.01.T01 | AT3G25030 | 53.448 | 116 | 46 | 2 | 117 | 225 | 136 | 250 | 2.61e-34 | 123 |
| MsG0880047681.01.T01 | AT3G25030 | 53.448 | 116 | 46 | 2 | 117 | 225 | 136 | 250 | 2.61e-34 | 123 |
| MsG0880047681.01.T01 | AT3G25030 | 53.448 | 116 | 46 | 2 | 117 | 225 | 136 | 250 | 2.61e-34 | 123 |
| MsG0880047681.01.T01 | AT4G13100 | 50.394 | 127 | 32 | 4 | 117 | 225 | 146 | 259 | 1.60e-29 | 111 |
| MsG0880047681.01.T01 | AT4G13100 | 50.394 | 127 | 32 | 4 | 117 | 225 | 146 | 259 | 1.60e-29 | 111 |
| MsG0880047681.01.T01 | AT4G13100 | 50.394 | 127 | 32 | 4 | 117 | 225 | 146 | 259 | 1.60e-29 | 111 |
| MsG0880047681.01.T01 | AT4G13100 | 50.394 | 127 | 32 | 4 | 117 | 225 | 146 | 259 | 1.60e-29 | 111 |
| MsG0880047681.01.T01 | AT4G13100 | 50.394 | 127 | 32 | 4 | 117 | 225 | 143 | 256 | 1.70e-29 | 110 |
| MsG0880047681.01.T01 | AT4G13100 | 49.606 | 127 | 30 | 4 | 117 | 225 | 146 | 256 | 2.36e-29 | 110 |
| MsG0880047681.01.T01 | AT4G13100 | 49.606 | 127 | 30 | 4 | 117 | 225 | 146 | 256 | 2.36e-29 | 110 |
| MsG0880047681.01.T01 | AT4G13100 | 49.606 | 127 | 30 | 4 | 117 | 225 | 155 | 265 | 3.50e-29 | 110 |
| MsG0880047681.01.T01 | AT3G07120 | 59.184 | 49 | 20 | 0 | 177 | 225 | 312 | 360 | 7.39e-17 | 78.6 |
Find 73 sgRNAs with CRISPR-Local
Find 75 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGATGTTCGTTGCGGATAAT+TGG | 0.249983 | 8:-89589066 | None:intergenic |
| GTTTCACATTCCGGTTCAAC+TGG | 0.280636 | 8:-89589180 | None:intergenic |
| GTGGTGGGTTCGTCTGGTTC+TGG | 0.300899 | 8:+89589207 | MsG0880047681.01.T01:CDS |
| TTCTTTGAGACTACGTCTTC+TGG | 0.310742 | 8:-89588992 | None:intergenic |
| TGGGTTGTTGTGGTGCCACC+TGG | 0.326153 | 8:+89589034 | MsG0880047681.01.T01:CDS |
| ACTCCGGTGGTGGGTTCGTC+TGG | 0.370885 | 8:+89589201 | MsG0880047681.01.T01:CDS |
| CCTTGCGGCGGCGTTGGCGG+CGG | 0.381107 | 8:+89589236 | MsG0880047681.01.T01:CDS |
| CAAATGGACAGTTTAGATTC+AGG | 0.383260 | 8:+89588964 | MsG0880047681.01.T01:CDS |
| CGCTTCAGATTCACCGGTAT+GGG | 0.387954 | 8:+89589015 | MsG0880047681.01.T01:CDS |
| CGGTTTATTAACCGAACAAA+TGG | 0.401011 | 8:+89588948 | MsG0880047681.01.T01:CDS |
| CCGCCGCCAACGCCGCCGCA+AGG | 0.401311 | 8:-89589236 | None:intergenic |
| CATTCCGGTTCAACTGGGTT+CGG | 0.404037 | 8:-89589174 | None:intergenic |
| ATCTAAACTGTCCATTTGTT+CGG | 0.404178 | 8:-89588959 | None:intergenic |
| GAACCTTGCGGCGGCGTTGG+CGG | 0.404942 | 8:+89589233 | MsG0880047681.01.T01:CDS |
| TTCGGTTAATAAACCGAGAA+TGG | 0.411730 | 8:-89588941 | None:intergenic |
| GCTAGTGGTGGTGGCGGAGA+AGG | 0.413073 | 8:+89589285 | MsG0880047681.01.T01:CDS |
| TCAACTCGGTCTCATATTGC+AGG | 0.414710 | 8:+89588888 | MsG0880047681.01.T01:CDS |
| ACGGAGGAGGCTAGTGGTGG+TGG | 0.422655 | 8:+89589276 | MsG0880047681.01.T01:CDS |
| AGAGAATCAAGAACCATTCT+CGG | 0.424957 | 8:+89588928 | MsG0880047681.01.T01:CDS |
| AGATCCGAACCCAGTTGAAC+CGG | 0.458025 | 8:+89589170 | MsG0880047681.01.T01:CDS |
| AATGAACCTTGCGGCGGCGT+TGG | 0.463100 | 8:+89589230 | MsG0880047681.01.T01:CDS |
| ACCACCGGAGTTTCACATTC+CGG | 0.463442 | 8:-89589189 | None:intergenic |
| TAATGCTGGTGCGGTGGTTG+TGG | 0.471853 | 8:+89589371 | MsG0880047681.01.T01:CDS |
| TGGCGGCGGAGCGGCAAATG+AGG | 0.476419 | 8:+89589250 | MsG0880047681.01.T01:CDS |
| GAGAATAGAACGATTACAAA+GGG | 0.479329 | 8:-89589517 | None:intergenic |
| CGGCGGCGTTGGCGGCGGAG+CGG | 0.486064 | 8:+89589241 | MsG0880047681.01.T01:CDS |
| ACGCTTCAGATTCACCGGTA+TGG | 0.495940 | 8:+89589014 | MsG0880047681.01.T01:CDS |
| GCTGGTGCGGTGGTTGTGGA+AGG | 0.512004 | 8:+89589375 | MsG0880047681.01.T01:CDS |
| AGTTTCGTTGATGAAACTGT+TGG | 0.512656 | 8:+89589323 | MsG0880047681.01.T01:CDS |
| GAGGAGGCTAGTGGTGGTGG+CGG | 0.517007 | 8:+89589279 | MsG0880047681.01.T01:CDS |
| GATGAAACTGTTGGAGGAAA+CGG | 0.519664 | 8:+89589332 | MsG0880047681.01.T01:CDS |
| TTCGTTGATGAAACTGTTGG+AGG | 0.522016 | 8:+89589326 | MsG0880047681.01.T01:CDS |
| GGAATGTGAAACTCCGGTGG+TGG | 0.529577 | 8:+89589191 | MsG0880047681.01.T01:CDS |
| ACTGTTGGAGGAAACGGAAG+TGG | 0.532838 | 8:+89589338 | MsG0880047681.01.T01:CDS |
| GCAAATGAGGGTAACGGAGG+AGG | 0.537713 | 8:+89589263 | MsG0880047681.01.T01:CDS |
| CAACAACAACAAAACGAAGA+AGG | 0.542306 | 8:+89589099 | MsG0880047681.01.T01:CDS |
| GGCACCACAACAACCCATAC+CGG | 0.553017 | 8:-89589028 | None:intergenic |
| GGGTTGTTGTGGTGCCACCT+GGG | 0.563855 | 8:+89589035 | MsG0880047681.01.T01:CDS |
| CCGGTCAATATGAGTCAACT+CGG | 0.576822 | 8:+89588874 | None:intergenic |
| TTTCACATTCCGGTTCAACT+GGG | 0.578697 | 8:-89589179 | None:intergenic |
| GAACCAGACGAACCCACCAC+CGG | 0.580808 | 8:-89589204 | None:intergenic |
| GTGGAAAATGAGAGTAATGC+TGG | 0.585452 | 8:+89589357 | MsG0880047681.01.T01:CDS |
| AAAGAACGCTTCAGATTCAC+CGG | 0.587827 | 8:+89589009 | MsG0880047681.01.T01:CDS |
| GGCGGCGGAGCGGCAAATGA+GGG | 0.590263 | 8:+89589251 | MsG0880047681.01.T01:CDS |
| CGAGAATAGAACGATTACAA+AGG | 0.598192 | 8:-89589518 | None:intergenic |
| CTGGTGCGGTGGTTGTGGAA+GGG | 0.603127 | 8:+89589376 | MsG0880047681.01.T01:CDS |
| TTCACCGGTATGGGTTGTTG+TGG | 0.607708 | 8:+89589024 | MsG0880047681.01.T01:CDS |
| GGAGCGGCAAATGAGGGTAA+CGG | 0.608763 | 8:+89589257 | MsG0880047681.01.T01:CDS |
| CAACAACAAAACGAAGAAGG+TGG | 0.612798 | 8:+89589102 | MsG0880047681.01.T01:CDS |
| TGAACCGGAATGTGAAACTC+CGG | 0.616093 | 8:+89589185 | MsG0880047681.01.T01:CDS |
| GTTCGTTGCGGATAATTGGA+CGG | 0.625036 | 8:-89589062 | None:intergenic |
| GCGGAGAAGGAGCGACGCCG+TGG | 0.628639 | 8:+89589298 | MsG0880047681.01.T01:CDS |
| AGGGTAACGGAGGAGGCTAG+TGG | 0.629298 | 8:+89589270 | MsG0880047681.01.T01:CDS |
| GTAACGGAGGAGGCTAGTGG+TGG | 0.631967 | 8:+89589273 | MsG0880047681.01.T01:CDS |
| TTTGAGACTACGTCTTCTGG+TGG | 0.634831 | 8:-89588989 | None:intergenic |
| GAATGTGAAACTCCGGTGGT+GGG | 0.635237 | 8:+89589192 | MsG0880047681.01.T01:CDS |
| TTGTTGTTGTTGCTCCACTG+TGG | 0.640686 | 8:-89589127 | None:intergenic |
| GCGGCAAATGAGGGTAACGG+AGG | 0.646014 | 8:+89589260 | MsG0880047681.01.T01:CDS |
| GATAATTGGACGGAAAACCC+AGG | 0.649559 | 8:-89589052 | None:intergenic |
| CGAAGAAGGTGGAGCCACAG+TGG | 0.650707 | 8:+89589113 | MsG0880047681.01.T01:CDS |
| AGGGAACTGTGGTTGAATCG+AGG | 0.655246 | 8:+89589486 | MsG0880047681.01.T01:CDS |
| TTCATCAACGAAACTCTCCA+CGG | 0.677889 | 8:-89589315 | None:intergenic |
| GTGTGCATGAGAAGAAAGAA+AGG | 0.679700 | 8:+89589417 | MsG0880047681.01.T01:CDS |
| GATGATGATGATGTTCGTTG+CGG | 0.682625 | 8:-89589074 | None:intergenic |
| TGAGAGTAATGCTGGTGCGG+TGG | 0.688076 | 8:+89589365 | MsG0880047681.01.T01:CDS |
| GAGTGTGTTCGAGGGAACTG+TGG | 0.692857 | 8:+89589475 | MsG0880047681.01.T01:CDS |
| TTCTGGAATGAACCTTGCGG+CGG | 0.694080 | 8:+89589224 | MsG0880047681.01.T01:CDS |
| AAATGAGAGTAATGCTGGTG+CGG | 0.699341 | 8:+89589362 | MsG0880047681.01.T01:CDS |
| GGTGCAGCGTTCATACCGTG+TGG | 0.706510 | 8:+89589438 | MsG0880047681.01.T01:CDS |
| AGAATAGAACGATTACAAAG+GGG | 0.720178 | 8:-89589516 | None:intergenic |
| TGGTTCTGGAATGAACCTTG+CGG | 0.740354 | 8:+89589221 | MsG0880047681.01.T01:CDS |
| ACCGGAATGTGAAACTCCGG+TGG | 0.748395 | 8:+89589188 | MsG0880047681.01.T01:CDS |
| AATTGGACGGAAAACCCAGG+TGG | 0.782059 | 8:-89589049 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| AGAATAGAACGATTACAAAG+GGG | - | Chr8:89589519-89589538 | None:intergenic | 30.0% | |
| ATCTAAACTGTCCATTTGTT+CGG | - | Chr8:89588962-89588981 | None:intergenic | 30.0% | |
| GAGAATAGAACGATTACAAA+GGG | - | Chr8:89589520-89589539 | None:intergenic | 30.0% | |
| AGAGAATCAAGAACCATTCT+CGG | + | Chr8:89588928-89588947 | MsG0880047681.01.T01:CDS | 35.0% | |
| CAAATGGACAGTTTAGATTC+AGG | + | Chr8:89588964-89588983 | MsG0880047681.01.T01:CDS | 35.0% | |
| CAACAACAACAAAACGAAGA+AGG | + | Chr8:89589099-89589118 | MsG0880047681.01.T01:CDS | 35.0% | |
| CGAGAATAGAACGATTACAA+AGG | - | Chr8:89589521-89589540 | None:intergenic | 35.0% | |
| CGGTTTATTAACCGAACAAA+TGG | + | Chr8:89588948-89588967 | MsG0880047681.01.T01:CDS | 35.0% | |
| TTCGGTTAATAAACCGAGAA+TGG | - | Chr8:89588944-89588963 | None:intergenic | 35.0% | |
| ! | AGTTTCGTTGATGAAACTGT+TGG | + | Chr8:89589323-89589342 | MsG0880047681.01.T01:CDS | 35.0% |
| AAAGAACGCTTCAGATTCAC+CGG | + | Chr8:89589009-89589028 | MsG0880047681.01.T01:CDS | 40.0% | |
| AAATGAGAGTAATGCTGGTG+CGG | + | Chr8:89589362-89589381 | MsG0880047681.01.T01:CDS | 40.0% | |
| CAACAACAAAACGAAGAAGG+TGG | + | Chr8:89589102-89589121 | MsG0880047681.01.T01:CDS | 40.0% | |
| GATGAAACTGTTGGAGGAAA+CGG | + | Chr8:89589332-89589351 | MsG0880047681.01.T01:CDS | 40.0% | |
| GTGGAAAATGAGAGTAATGC+TGG | + | Chr8:89589357-89589376 | MsG0880047681.01.T01:CDS | 40.0% | |
| GTGTGCATGAGAAGAAAGAA+AGG | + | Chr8:89589417-89589436 | MsG0880047681.01.T01:CDS | 40.0% | |
| TGATGTTCGTTGCGGATAAT+TGG | - | Chr8:89589069-89589088 | None:intergenic | 40.0% | |
| TTCATCAACGAAACTCTCCA+CGG | - | Chr8:89589318-89589337 | None:intergenic | 40.0% | |
| TTTCACATTCCGGTTCAACT+GGG | - | Chr8:89589182-89589201 | None:intergenic | 40.0% | |
| ! | GATGATGATGATGTTCGTTG+CGG | - | Chr8:89589077-89589096 | None:intergenic | 40.0% |
| ! | TTCGTTGATGAAACTGTTGG+AGG | + | Chr8:89589326-89589345 | MsG0880047681.01.T01:CDS | 40.0% |
| ! | TTTTTGCAGAGTGTGTTCGA+GGG | + | Chr8:89589467-89589486 | MsG0880047681.01.T01:CDS | 40.0% |
| !! | TTCTTTGAGACTACGTCTTC+TGG | - | Chr8:89588995-89589014 | None:intergenic | 40.0% |
| GATAATTGGACGGAAAACCC+AGG | - | Chr8:89589055-89589074 | None:intergenic | 45.0% | |
| GTTCGTTGCGGATAATTGGA+CGG | - | Chr8:89589065-89589084 | None:intergenic | 45.0% | |
| GTTTCACATTCCGGTTCAAC+TGG | - | Chr8:89589183-89589202 | None:intergenic | 45.0% | |
| TCAACTCGGTCTCATATTGC+AGG | + | Chr8:89588888-89588907 | MsG0880047681.01.T01:CDS | 45.0% | |
| TGAACCGGAATGTGAAACTC+CGG | + | Chr8:89589185-89589204 | MsG0880047681.01.T01:CDS | 45.0% | |
| ! | CTGCAAAAAGTGTGTCCACA+CGG | - | Chr8:89589456-89589475 | None:intergenic | 45.0% |
| ! | CTTTTTGCAGAGTGTGTTCG+AGG | + | Chr8:89589466-89589485 | MsG0880047681.01.T01:CDS | 45.0% |
| ! | TTGTTGTTGTTGCTCCACTG+TGG | - | Chr8:89589130-89589149 | None:intergenic | 45.0% |
| ! | TTTGAGACTACGTCTTCTGG+TGG | - | Chr8:89588992-89589011 | None:intergenic | 45.0% |
| !! | TGGTTCTGGAATGAACCTTG+CGG | + | Chr8:89589221-89589240 | MsG0880047681.01.T01:CDS | 45.0% |
| AATTGGACGGAAAACCCAGG+TGG | - | Chr8:89589052-89589071 | None:intergenic | 50.0% | |
| ACCACCGGAGTTTCACATTC+CGG | - | Chr8:89589192-89589211 | None:intergenic | 50.0% | |
| ACGCTTCAGATTCACCGGTA+TGG | + | Chr8:89589014-89589033 | MsG0880047681.01.T01:CDS | 50.0% | |
| ACTGTTGGAGGAAACGGAAG+TGG | + | Chr8:89589338-89589357 | MsG0880047681.01.T01:CDS | 50.0% | |
| AGATCCGAACCCAGTTGAAC+CGG | + | Chr8:89589170-89589189 | MsG0880047681.01.T01:CDS | 50.0% | |
| AGGGAACTGTGGTTGAATCG+AGG | + | Chr8:89589486-89589505 | MsG0880047681.01.T01:CDS | 50.0% | |
| CATTCCGGTTCAACTGGGTT+CGG | - | Chr8:89589177-89589196 | None:intergenic | 50.0% | |
| CGCTTCAGATTCACCGGTAT+GGG | + | Chr8:89589015-89589034 | MsG0880047681.01.T01:CDS | 50.0% | |
| GAATGTGAAACTCCGGTGGT+GGG | + | Chr8:89589192-89589211 | MsG0880047681.01.T01:CDS | 50.0% | |
| ! | TTCACCGGTATGGGTTGTTG+TGG | + | Chr8:89589024-89589043 | MsG0880047681.01.T01:CDS | 50.0% |
| !! | TTCTGGAATGAACCTTGCGG+CGG | + | Chr8:89589224-89589243 | MsG0880047681.01.T01:CDS | 50.0% |
| ACCGGAATGTGAAACTCCGG+TGG | + | Chr8:89589188-89589207 | MsG0880047681.01.T01:CDS | 55.0% | |
| GAGTGTGTTCGAGGGAACTG+TGG | + | Chr8:89589475-89589494 | MsG0880047681.01.T01:CDS | 55.0% | |
| GGAATGTGAAACTCCGGTGG+TGG | + | Chr8:89589191-89589210 | MsG0880047681.01.T01:CDS | 55.0% | |
| GGAGCGGCAAATGAGGGTAA+CGG | + | Chr8:89589257-89589276 | MsG0880047681.01.T01:CDS | 55.0% | |
| GGCACCACAACAACCCATAC+CGG | - | Chr8:89589031-89589050 | None:intergenic | 55.0% | |
| TAATGCTGGTGCGGTGGTTG+TGG | + | Chr8:89589371-89589390 | MsG0880047681.01.T01:CDS | 55.0% | |
| TGAGAGTAATGCTGGTGCGG+TGG | + | Chr8:89589365-89589384 | MsG0880047681.01.T01:CDS | 55.0% | |
| !! | GCAAATGAGGGTAACGGAGG+AGG | + | Chr8:89589263-89589282 | MsG0880047681.01.T01:CDS | 55.0% |
| AATGAACCTTGCGGCGGCGT+TGG | + | Chr8:89589230-89589249 | MsG0880047681.01.T01:CDS | 60.0% | |
| CGAAGAAGGTGGAGCCACAG+TGG | + | Chr8:89589113-89589132 | MsG0880047681.01.T01:CDS | 60.0% | |
| CTGGTGCGGTGGTTGTGGAA+GGG | + | Chr8:89589376-89589395 | MsG0880047681.01.T01:CDS | 60.0% | |
| GAACCAGACGAACCCACCAC+CGG | - | Chr8:89589207-89589226 | None:intergenic | 60.0% | |
| GGTGCAGCGTTCATACCGTG+TGG | + | Chr8:89589438-89589457 | MsG0880047681.01.T01:CDS | 60.0% | |
| ! | GCGGCAAATGAGGGTAACGG+AGG | + | Chr8:89589260-89589279 | MsG0880047681.01.T01:CDS | 60.0% |
| ! | GTAACGGAGGAGGCTAGTGG+TGG | + | Chr8:89589273-89589292 | MsG0880047681.01.T01:CDS | 60.0% |
| !! | AGGGTAACGGAGGAGGCTAG+TGG | + | Chr8:89589270-89589289 | MsG0880047681.01.T01:CDS | 60.0% |
| !! | GGGTTGTTGTGGTGCCACCT+GGG | + | Chr8:89589035-89589054 | MsG0880047681.01.T01:CDS | 60.0% |
| !! | GTGGTGGGTTCGTCTGGTTC+TGG | + | Chr8:89589207-89589226 | MsG0880047681.01.T01:CDS | 60.0% |
| !! | TGGGTTGTTGTGGTGCCACC+TGG | + | Chr8:89589034-89589053 | MsG0880047681.01.T01:CDS | 60.0% |
| ACGGAGGAGGCTAGTGGTGG+TGG | + | Chr8:89589276-89589295 | MsG0880047681.01.T01:CDS | 65.0% | |
| GCTGGTGCGGTGGTTGTGGA+AGG | + | Chr8:89589375-89589394 | MsG0880047681.01.T01:CDS | 65.0% | |
| !! | ACTCCGGTGGTGGGTTCGTC+TGG | + | Chr8:89589201-89589220 | MsG0880047681.01.T01:CDS | 65.0% |
| !! | GAGGAGGCTAGTGGTGGTGG+CGG | + | Chr8:89589279-89589298 | MsG0880047681.01.T01:CDS | 65.0% |
| !! | GCTAGTGGTGGTGGCGGAGA+AGG | + | Chr8:89589285-89589304 | MsG0880047681.01.T01:CDS | 65.0% |
| GGCGGCGGAGCGGCAAATGA+GGG | + | Chr8:89589251-89589270 | MsG0880047681.01.T01:CDS | 70.0% | |
| TGGCGGCGGAGCGGCAAATG+AGG | + | Chr8:89589250-89589269 | MsG0880047681.01.T01:CDS | 70.0% | |
| ! | GAACCTTGCGGCGGCGTTGG+CGG | + | Chr8:89589233-89589252 | MsG0880047681.01.T01:CDS | 70.0% |
| GCGGAGAAGGAGCGACGCCG+TGG | + | Chr8:89589298-89589317 | MsG0880047681.01.T01:CDS | 75.0% | |
| !!! | CCTTGCGGCGGCGTTGGCGG+CGG | + | Chr8:89589236-89589255 | MsG0880047681.01.T01:CDS | 80.0% |
| ! | CCGCCGCCAACGCCGCCGCA+AGG | - | Chr8:89589239-89589258 | None:intergenic | 85.0% |
| !!! | CGGCGGCGTTGGCGGCGGAG+CGG | + | Chr8:89589241-89589260 | MsG0880047681.01.T01:CDS | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 89588883 | 89589560 | 89588883 | ID=MsG0880047681.01;Name=MsG0880047681.01 |
| Chr8 | mRNA | 89588883 | 89589560 | 89588883 | ID=MsG0880047681.01.T01;Parent=MsG0880047681.01;Name=MsG0880047681.01.T01;_AED=0.28;_eAED=0.28;_QI=0|-1|0|1|-1|1|1|0|225 |
| Chr8 | exon | 89588883 | 89589560 | 89588883 | ID=MsG0880047681.01.T01:exon:18171;Parent=MsG0880047681.01.T01 |
| Chr8 | CDS | 89588883 | 89589560 | 89588883 | ID=MsG0880047681.01.T01:cds;Parent=MsG0880047681.01.T01 |
| Gene Sequence |
| Protein sequence |
