AlfalfaGEDB | Msa0145980

M. sativa cultivar zhongmu-4 / Msa0145980

KEGG: K06689
GO: -
PFAM: PF00179.29

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0145980	XP_003589256.1	100.000	111	0	0	1	111	38	148	4.43e-76	231

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0145980	sp\|P35135\|UBC4_SOLLC	93.694	111	7	0	1	111	38	148	1.04e-75	223

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0145980	G7I4J0	100.000	111	0	0	1	111	38	148	2.11e-76	231

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0011850	Msa0145980	-0.835771	1.382287e-56	-8.615850e-47
Msa0029540	Msa0145980	0.802161	6.398199e-49	-8.615850e-47
Msa0051430	Msa0145980	0.815454	9.167707e-52	-8.615850e-47
Msa0101810	Msa0145980	0.855979	4.386434e-62	-8.615850e-47
Msa0115830	Msa0145980	-0.808107	3.644063e-50	-8.615850e-47
Msa0138970	Msa0145980	0.824995	5.967001e-54	-8.615850e-47
Msa0142470	Msa0145980	-0.840874	6.684942e-58	-8.615850e-47
Msa0145070	Msa0145980	-0.801486	8.803761e-49	-8.615850e-47
Msa0145980	Msa0227510	-0.800392	1.472327e-48	-8.615850e-47
Msa0145980	Msa0356890	0.844840	5.892193e-59	-8.615850e-47
Msa0145980	Msa0436280	0.805107	1.566228e-49	-8.615850e-47
Msa0145980	Msa0448550	0.800270	1.559110e-48	-8.615850e-47
Msa0145980	Msa0554110	-0.815372	9.560300e-52	-8.615850e-47
Msa0145980	Msa0569020	-0.827462	1.543840e-54	-8.615850e-47
Msa0145980	Msa0608200	-0.802511	5.419449e-49	-8.615850e-47
Msa0145980	Msa0634640	-0.808499	3.006118e-50	-8.615850e-47
Msa0145980	Msa0648520	-0.847895	8.654661e-60	-8.615850e-47
Msa0145980	Msa0691050	-0.831165	1.948585e-55	-8.615850e-47
Msa0145980	Msa0705430	-0.809497	1.837364e-50	-8.615850e-47
Msa0145980	Msa0743680	-0.855476	6.150393e-62	-8.615850e-47
Msa0145980	Msa0754720	0.826710	2.336300e-54	-8.615850e-47
Msa0145980	Msa0756630	0.820755	5.799388e-53	-8.615850e-47
Msa0145980	Msa0784620	-0.851099	1.106361e-60	-8.615850e-47
Msa0145980	Msa0802470	0.807006	6.240714e-50	-8.615850e-47
Msa0145980	Msa0824730	-0.817331	3.485881e-52	-8.615850e-47
Msa0145980	Msa0849330	-0.820004	8.625073e-53	-8.615850e-47
Msa0145980	Msa0863800	-0.852789	3.666437e-61	-8.615850e-47
Msa0145980	Msa0959010	-0.800337	1.511085e-48	-8.615850e-47
Msa0145980	Msa0993530	-0.815486	9.020989e-52	-8.615850e-47
Msa0145980	Msa1020710	-0.809739	1.630823e-50	-8.615850e-47
Msa0145980	Msa1037650	0.816098	6.588395e-52	-8.615850e-47
Msa0145980	Msa1143620	-0.834453	2.971051e-56	-8.615850e-47
Msa0145980	Msa1157690	-0.801284	9.683186e-49	-8.615850e-47
Msa0145980	Msa1188720	-0.811360	7.280071e-51	-8.615850e-47
Msa0145980	Msa1221900	-0.834773	2.468795e-56	-8.615850e-47
Msa0145980	Msa1231930	-0.806741	7.100958e-50	-8.615850e-47
Msa0145980	Msa1265070	-0.820954	5.219254e-53	-8.615850e-47
Msa0145980	Msa1269580	0.804918	1.715395e-49	-8.615850e-47
Msa0145980	Msa1337730	-0.839164	1.866863e-57	-8.615850e-47
Msa0145980	Msa1360890	0.830893	2.272489e-55	-8.615850e-47
Msa0145980	Msa1362510	-0.807468	4.980271e-50	-8.615850e-47
Msa0145980	Msa1395530	-0.806199	9.239233e-50	-8.615850e-47
Msa0145980	Msa1398860	-0.813068	3.086660e-51	-8.615850e-47
Msa0145980	Msa1429360	0.800337	1.511085e-48	-8.615850e-47
Msa0145980	Msa1459390	-0.844858	5.825349e-59	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0145980	MtrunA17_Chr1g0154011	100.000	111	0	0	1	111	38	148	4.07e-80	231
Msa0145980	MtrunA17_Chr7g0275361	93.694	111	7	0	1	111	38	148	1.59e-76	222
Msa0145980	MtrunA17_Chr3g0108261	92.793	111	8	0	1	111	38	148	3.29e-76	221
Msa0145980	MtrunA17_Chr5g0432831	92.793	111	8	0	1	111	38	148	3.29e-76	221
Msa0145980	MtrunA17_Chr8g0369311	91.892	111	9	0	1	111	94	204	1.80e-74	219
Msa0145980	MtrunA17_Chr4g0037011	88.288	111	13	0	1	111	38	148	1.03e-72	213
Msa0145980	MtrunA17_Chr2g0316201	54.128	109	50	0	1	109	42	150	2.34e-40	131
Msa0145980	MtrunA17_Chr2g0316211	53.211	109	51	0	1	109	42	150	1.17e-39	129
Msa0145980	MtrunA17_Chr8g0378601	50.459	109	54	0	1	109	59	167	3.11e-38	126
Msa0145980	MtrunA17_Chr3g0131871	55.046	109	48	1	2	109	41	149	3.36e-38	127
Msa0145980	MtrunA17_Chr8g0362321	49.091	110	51	1	1	105	41	150	9.93e-34	114
Msa0145980	MtrunA17_Chr4g0060351	48.182	110	52	1	1	105	41	150	2.54e-33	113
Msa0145980	MtrunA17_Chr3g0139901	44.144	111	60	2	2	110	43	153	5.70e-29	102
Msa0145980	MtrunA17_Chr1g0199951	46.392	97	51	1	2	98	80	175	2.07e-26	97.1
Msa0145980	MtrunA17_Chr4g0053191	41.284	109	62	1	2	108	47	155	7.78e-26	94.4
Msa0145980	MtrunA17_Chr4g0038891	46.237	93	50	0	2	94	70	162	9.78e-26	94.7
Msa0145980	MtrunA17_Chr8g0348701	39.091	110	65	2	2	109	38	147	1.21e-25	94.7
Msa0145980	MtrunA17_Chr5g0396451	45.161	93	51	0	2	94	70	162	2.26e-25	94.0
Msa0145980	MtrunA17_Chr5g0403591	41.000	100	59	0	3	102	67	166	6.33e-25	92.8
Msa0145980	MtrunA17_Chr8g0387131	38.182	110	66	2	2	109	38	147	1.14e-24	92.0
Msa0145980	MtrunA17_Chr5g0401831	38.532	109	65	1	2	108	47	155	1.64e-23	88.6
Msa0145980	MtrunA17_Chr4g0059291	36.364	110	68	2	2	109	38	147	5.16e-23	87.8
Msa0145980	MtrunA17_Chr4g0031181	33.333	111	61	1	1	98	42	152	3.98e-21	82.4
Msa0145980	MtrunA17_Chr7g0254701	37.037	108	68	0	2	109	48	155	9.62e-21	84.0
Msa0145980	MtrunA17_Chr2g0328001	30.833	120	70	1	1	107	42	161	6.13e-19	77.0
Msa0145980	MtrunA17_Chr1g0186291	29.293	99	56	2	6	103	30	115	4.23e-13	61.2
Msa0145980	MtrunA17_Chr8g0372391	45.455	66	35	1	1	65	51	116	1.34e-12	60.5
Msa0145980	MtrunA17_Chr8g0376111	36.364	88	46	3	1	78	77	164	3.57e-12	61.2
Msa0145980	MtrunA17_Chr5g0404931	44.286	70	34	2	2	70	52	117	5.24e-12	58.9
Msa0145980	MtrunA17_Chr7g0222941	32.955	88	49	3	1	78	125	212	1.31e-11	58.9
Msa0145980	MtrunA17_Chr7g0233631	36.364	88	46	3	1	78	72	159	2.51e-11	58.9
Msa0145980	MtrunA17_Chr4g0047301	35.227	88	47	3	1	78	706	793	3.92e-11	58.5
Msa0145980	MtrunA17_Chr7g0233611	36.364	88	46	3	1	78	72	159	4.10e-11	58.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0145980	AT1G64230.5	91.892	111	9	0	1	111	80	190	2.19e-76	224
Msa0145980	AT1G64230.4	91.892	111	9	0	1	111	80	190	2.19e-76	224
Msa0145980	AT1G64230.2	91.892	111	9	0	1	111	38	148	2.99e-76	222
Msa0145980	AT1G64230.1	91.892	111	9	0	1	111	38	148	2.99e-76	222
Msa0145980	AT1G64230.3	91.892	111	9	0	1	111	47	157	4.26e-76	222
Msa0145980	AT5G53300.2	92.793	111	8	0	1	111	38	148	7.19e-76	221
Msa0145980	AT5G53300.4	92.793	111	8	0	1	111	38	148	7.19e-76	221
Msa0145980	AT5G53300.1	92.793	111	8	0	1	111	38	148	7.19e-76	221
Msa0145980	AT5G41700.5	91.892	111	9	0	1	111	38	148	9.06e-76	221
Msa0145980	AT5G41700.2	91.892	111	9	0	1	111	38	148	9.06e-76	221
Msa0145980	AT5G41700.1	91.892	111	9	0	1	111	38	148	9.06e-76	221
Msa0145980	AT5G41700.4	91.892	111	9	0	1	111	39	149	1.34e-75	220
Msa0145980	AT4G27960.1	91.892	111	9	0	1	111	38	148	2.11e-75	220
Msa0145980	AT4G27960.2	91.892	111	9	0	1	111	68	178	7.80e-75	219
Msa0145980	AT5G56150.1	90.991	111	10	0	1	111	38	148	1.66e-74	218
Msa0145980	AT3G08690.2	90.090	111	11	0	1	111	38	148	3.27e-74	217
Msa0145980	AT3G08690.1	90.090	111	11	0	1	111	38	148	3.27e-74	217
Msa0145980	AT2G16740.1	87.273	110	14	0	1	110	38	147	1.56e-70	207
Msa0145980	AT3G08700.2	79.279	111	23	0	1	111	39	149	2.04e-63	189
Msa0145980	AT3G08700.1	79.279	111	23	0	1	111	39	149	2.04e-63	189
Msa0145980	AT5G41700.3	92.537	67	5	0	1	67	38	104	8.77e-43	137
Msa0145980	AT5G56150.2	93.939	66	4	0	1	66	38	103	3.05e-42	135
Msa0145980	AT5G53300.3	88.889	72	6	1	1	70	38	109	3.35e-42	134
Msa0145980	AT1G16890.1	54.128	109	50	0	1	109	9	117	1.68e-40	130
Msa0145980	AT1G16890.2	54.128	109	50	0	1	109	42	150	2.60e-40	131
Msa0145980	AT1G78870.4	54.128	109	50	0	1	109	9	117	2.80e-40	130
Msa0145980	AT1G36340.2	55.455	110	49	0	2	111	45	154	3.44e-40	131
Msa0145980	AT1G36340.1	55.455	110	49	0	2	111	45	154	3.44e-40	131
Msa0145980	AT1G16890.3	54.128	109	50	0	1	109	51	159	4.75e-40	130
Msa0145980	AT1G78870.2	54.128	109	50	0	1	109	42	150	5.06e-40	130
Msa0145980	AT1G78870.1	53.636	110	50	1	1	109	9	118	1.99e-38	125
Msa0145980	AT3G13550.1	45.872	109	59	0	1	109	73	181	3.75e-36	121
Msa0145980	AT5G50870.1	51.376	109	52	1	2	109	41	149	1.24e-34	118
Msa0145980	AT5G62540.1	53.608	97	45	0	1	97	41	137	2.41e-33	113
Msa0145980	AT1G14400.1	49.091	110	51	1	1	105	41	150	2.94e-33	113
Msa0145980	AT1G14400.2	49.091	110	51	1	1	105	41	150	2.94e-33	113
Msa0145980	AT2G02760.1	48.182	110	52	1	1	105	41	150	5.47e-33	112
Msa0145980	AT2G02760.2	48.182	110	52	1	1	105	41	150	5.47e-33	112
Msa0145980	AT2G02760.4	48.182	110	52	1	1	105	41	150	5.47e-33	112
Msa0145980	AT2G02760.3	48.182	110	52	1	1	105	41	150	5.47e-33	112
Msa0145980	AT3G24515.1	47.321	112	55	1	2	109	53	164	1.08e-31	115
Msa0145980	AT3G24515.3	47.321	112	55	1	2	109	78	189	1.43e-31	115
Msa0145980	AT5G50870.2	46.667	120	52	2	2	109	41	160	3.37e-31	109
Msa0145980	AT2G32790.1	52.727	110	48	2	2	109	68	175	3.78e-29	103
Msa0145980	AT5G25760.1	43.243	111	61	2	2	110	43	153	8.69e-28	99.8
Msa0145980	AT5G25760.2	43.243	111	61	2	2	110	43	153	8.69e-28	99.8
Msa0145980	AT2G46030.5	40.000	110	64	2	2	109	38	147	7.37e-26	95.5
Msa0145980	AT2G46030.1	40.000	110	64	2	2	109	38	147	7.37e-26	95.5
Msa0145980	AT2G46030.4	40.000	110	64	2	2	109	41	150	9.32e-26	95.5
Msa0145980	AT2G46030.2	40.000	110	64	2	2	109	41	150	9.32e-26	95.5
Msa0145980	AT3G13550.2	48.718	78	40	0	1	78	73	150	1.33e-25	94.7
Msa0145980	AT2G46030.3	40.000	110	64	2	2	109	110	219	1.57e-25	96.3
Msa0145980	AT1G63800.2	40.000	110	64	2	2	109	23	132	1.60e-25	94.4
Msa0145980	AT1G63800.1	40.000	110	64	2	2	109	38	147	2.00e-25	94.4
Msa0145980	AT3G57870.1	41.284	109	62	1	2	108	48	156	2.23e-25	93.6
Msa0145980	AT5G41340.1	40.000	110	64	2	2	109	38	147	2.47e-25	94.4
Msa0145980	AT4G36800.2	41.000	100	59	0	3	102	68	167	2.19e-24	91.7
Msa0145980	AT4G36800.1	41.000	100	59	0	3	102	68	167	2.19e-24	91.7
Msa0145980	AT1G78870.3	54.930	71	32	0	1	71	42	112	2.28e-24	89.7
Msa0145980	AT1G50490.1	45.161	93	51	0	2	94	73	165	3.10e-24	91.3
Msa0145980	AT3G20060.2	44.086	93	52	0	2	94	29	121	1.25e-23	88.6
Msa0145980	AT3G20060.1	44.086	93	52	0	2	94	74	166	3.09e-23	89.0
Msa0145980	AT5G41340.2	38.462	104	62	2	8	109	9	112	8.38e-23	87.0
Msa0145980	AT3G55380.1	35.135	111	59	1	1	98	43	153	4.32e-22	85.5
Msa0145980	AT5G05080.2	37.963	108	67	0	2	109	48	155	8.76e-22	86.7
Msa0145980	AT5G05080.3	37.963	108	67	0	2	109	48	155	8.76e-22	86.7
Msa0145980	AT5G05080.1	37.963	108	67	0	2	109	48	155	8.76e-22	86.7
Msa0145980	AT5G05080.4	37.963	108	67	0	2	109	48	155	8.76e-22	86.7
Msa0145980	AT2G18600.1	36.000	100	64	0	3	102	69	168	2.62e-20	81.3
Msa0145980	AT2G18600.2	36.000	100	64	0	3	102	69	168	2.62e-20	81.3
Msa0145980	AT5G59300.1	31.667	120	69	1	1	107	42	161	1.82e-19	78.6
Msa0145980	AT3G46460.1	30.833	120	70	1	1	107	42	161	2.59e-19	78.2
Msa0145980	AT3G46460.3	29.730	111	65	1	10	107	9	119	1.40e-16	70.1
Msa0145980	AT3G46460.2	29.730	111	65	1	10	107	9	119	1.40e-16	70.1
Msa0145980	AT3G55380.2	26.207	145	60	2	1	98	43	187	1.24e-14	67.0
Msa0145980	AT1G75440.1	45.070	71	34	2	1	70	51	117	3.34e-12	59.7
Msa0145980	AT1G45050.1	44.615	65	35	1	2	65	52	116	7.70e-12	58.9
Msa0145980	AT5G42990.1	46.154	65	34	1	2	65	52	116	9.22e-12	58.5
Msa0145980	AT4G36410.1	43.750	64	31	2	8	70	58	117	2.31e-11	57.4

Find 54 sgRNAs with CRISPR-Local

Find 274 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GTTACCTTTGGTGGCTTAAA+TGG	0.184645	1_4:-5698523	None:intergenic
CTCCCATTGCTGTTGATGTT+AGG	0.317472	1_4:-5699314	None:intergenic
ATAAAACTTGGTTGTTGGTT+TGG	0.323051	1_4:-5700175	None:intergenic
GCGTCATTGTTCTATTATAT+AGG	0.361002	1_4:+5700232	Msa0145980:three_prime_UTR
TAAAACTTGGTTGTTGGTTT+GGG	0.363426	1_4:-5700174	None:intergenic
TTGTACATGTGGGCAATATC+AGG	0.375872	1_4:-5699921	None:intergenic
TCAGGCACCAAAGGATCATC+TGG	0.377413	1_4:-5699903	None:intergenic
GGTGGCTTAAATGGATAATC+TGG	0.389530	1_4:-5698514	None:intergenic
TGATTTGAACATATAGATAA+TGG	0.409991	1_4:-5700321	None:intergenic
GTCGGATAAAACTTGGTTGT+TGG	0.415903	1_4:-5700180	None:intergenic
TCCCATTGCTGTTGATGTTA+GGG	0.427658	1_4:-5699313	None:intergenic
TAGTAGCTTGCCAATGAAAC+AGG	0.428793	1_4:-5698429	None:intergenic
ACATATAGATAATGGTATAT+AGG	0.430215	1_4:-5700313	None:intergenic
TACTAGATAGTTACCTTTGG+TGG	0.430453	1_4:-5698532	None:intergenic
TGATATAGTGATTAATATAG+TGG	0.434916	1_4:-5700258	None:intergenic
TCCAAACCCAGATGATCCTT+TGG	0.446078	1_4:+5699896	Msa0145980:CDS
ATTCCACTACATAAATTAAA+CGG	0.446686	1_4:+5700210	Msa0145980:three_prime_UTR
ATGAGACTACTGCCCGGTCT+TGG	0.466598	1_4:+5699961	Msa0145980:CDS
ACCAAAGGATCATCTGGGTT+TGG	0.469354	1_4:-5699897	None:intergenic
TCACTTAGTCGGATAAAACT+TGG	0.471898	1_4:-5700187	None:intergenic
ACCCTAACATCAACAGCAAT+GGG	0.488484	1_4:+5699312	Msa0145980:CDS
TCATTGGCAAGCTACTATCA+TGG	0.489308	1_4:+5698435	Msa0145980:exon
CATATTTCTGAGTCCAAGAC+CGG	0.489374	1_4:-5699974	None:intergenic
CCGGGCAGTAGTCTCATACT+TGG	0.490655	1_4:-5699955	None:intergenic
GGTATATAGGTTATGTGGTA+AGG	0.505830	1_4:-5700300	None:intergenic
ACAAATGCTTGTGGTTCTAA+AGG	0.508568	1_4:+5700009	Msa0145980:three_prime_UTR
ACGCCGTTTAATTTATGTAG+TGG	0.509779	1_4:-5700213	None:intergenic
TGTAGTGGAATTCACTTAGT+CGG	0.514363	1_4:-5700198	None:intergenic
AGGAATACACCACCAGCATA+AGG	0.516668	1_4:-5698472	None:intergenic
CTTTGTCAGTCTTGTACATG+TGG	0.533650	1_4:-5699932	None:intergenic
TCCTGCTCTTACTGTTTCGA+AGG	0.541092	1_4:+5699370	Msa0145980:CDS
CACCCTAACATCAACAGCAA+TGG	0.544450	1_4:+5699311	Msa0145980:CDS
ACATGGTCGAAACTCGACTT+AGG	0.546688	1_4:-5700344	None:intergenic
CATTGGCAAGCTACTATCAT+GGG	0.548045	1_4:+5698436	Msa0145980:exon
GCAGAGAGCAAATTGACAGC+AGG	0.555230	1_4:-5699866	None:intergenic
GCAAGCTACTATCATGGGAC+CGG	0.562370	1_4:+5698441	Msa0145980:exon
GGCTTAAATGGATAATCTGG+TGG	0.570933	1_4:-5698511	None:intergenic
ATAATGGTATATAGGTTATG+TGG	0.576055	1_4:-5700305	None:intergenic
ACCTTCGAAACAGTAAGAGC+AGG	0.586563	1_4:-5699371	None:intergenic
CCGGCAGACAGTCCTTATGC+TGG	0.594140	1_4:+5698460	Msa0145980:CDS
GTGGGAAGTGAATGGTCACT+AGG	0.600222	1_4:-5698492	None:intergenic
CCAGCATAAGGACTGTCTGC+CGG	0.604386	1_4:-5698460	None:intergenic
CATTGCTGTTGATGTTAGGG+TGG	0.612271	1_4:-5699310	None:intergenic
TGGGCAATATCAGGCACCAA+AGG	0.612823	1_4:-5699912	None:intergenic
TTATCCATTTAAGCCACCAA+AGG	0.622832	1_4:+5698519	Msa0145980:CDS
GCAGACAGTCCTTATGCTGG+TGG	0.624021	1_4:+5698463	Msa0145980:CDS
ATAATCTGGTGGGAAGTGAA+TGG	0.636084	1_4:-5698500	None:intergenic
GCTTAAATGGATAATCTGGT+GGG	0.637843	1_4:-5698510	None:intergenic
CAGGCACCAAAGGATCATCT+GGG	0.640642	1_4:-5699902	None:intergenic
TTGACATTCTGAAAGAGCAG+TGG	0.642055	1_4:+5699345	Msa0145980:CDS
CCAAGTATGAGACTACTGCC+CGG	0.645693	1_4:+5699955	Msa0145980:CDS
TTTGTCAGTCTTGTACATGT+GGG	0.652799	1_4:-5699931	None:intergenic
TGAACTAGCACAAATGCTTG+TGG	0.653162	1_4:+5700000	Msa0145980:exon
ATATTTCTGAGTCCAAGACC+GGG	0.658098	1_4:-5699973	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATCTATACAACAAATATTAA+AGG	-	chr1_4:5699088-5699107	None:intergenic	15.0%
!!!	TGTTTTGAAAATAATGTTTT+TGG	+	chr1_4:5699225-5699244	Msa0145980:intron	15.0%
!!!	TATTTCATTTTCTATACTTT+TGG	+	chr1_4:5699607-5699626	Msa0145980:intron	15.0%
!!	ATCTATACAACAAATATTAA+AGG	-	chr1_4:5699088-5699107	None:intergenic	15.0%
!!!	TGTTTTGAAAATAATGTTTT+TGG	+	chr1_4:5699225-5699244	Msa0145980:intron	15.0%
!!!	TATTTCATTTTCTATACTTT+TGG	+	chr1_4:5699607-5699626	Msa0145980:intron	15.0%
!!!	ATATAATCATCTAAGATTCT+TGG	+	chr1_4:5698595-5698614	Msa0145980:intron	20.0%
!!	TATTGAAATCAATATGTACT+TGG	+	chr1_4:5698729-5698748	Msa0145980:intron	20.0%
!!	ATTGAAATCAATATGTACTT+GGG	+	chr1_4:5698730-5698749	Msa0145980:intron	20.0%
!!	TATTGAAATCAATATGTACT+TGG	+	chr1_4:5698729-5698748	Msa0145980:intron	20.0%
!!	ATTGAAATCAATATGTACTT+GGG	+	chr1_4:5698730-5698749	Msa0145980:intron	20.0%
!!!	TTTAATTGTTCTTGTTTATC+TGG	+	chr1_4:5698881-5698900	Msa0145980:intron	20.0%
!!!	TTAATTGTTCTTGTTTATCT+GGG	+	chr1_4:5698882-5698901	Msa0145980:intron	20.0%
!!!	GAAAATAATGTTTTTGGTTT+AGG	+	chr1_4:5699231-5699250	Msa0145980:intron	20.0%
!!!	TTTTTACTTCTGAATTAACT+TGG	-	chr1_4:5699548-5699567	None:intergenic	20.0%
!!	AAACTATTGCTTAAAATCTA+TGG	+	chr1_4:5699566-5699585	Msa0145980:intron	20.0%
!!!	AGTGAAAAAAATGTTGTTTT+TGG	+	chr1_4:5700076-5700095	Msa0145980:three_prime_UTR	20.0%
!!!	GTGAAAAAAATGTTGTTTTT+GGG	+	chr1_4:5700077-5700096	Msa0145980:three_prime_UTR	20.0%
!!	ATTCCACTACATAAATTAAA+CGG	+	chr1_4:5700210-5700229	Msa0145980:three_prime_UTR	20.0%
!!	TGATATAGTGATTAATATAG+TGG	-	chr1_4:5700261-5700280	None:intergenic	20.0%
!!!	ACATATAGATAATGGTATAT+AGG	-	chr1_4:5700316-5700335	None:intergenic	20.0%
!!	TGATTTGAACATATAGATAA+TGG	-	chr1_4:5700324-5700343	None:intergenic	20.0%
!!!	ATATAATCATCTAAGATTCT+TGG	+	chr1_4:5698595-5698614	Msa0145980:intron	20.0%
!!	TATTGAAATCAATATGTACT+TGG	+	chr1_4:5698729-5698748	Msa0145980:intron	20.0%
!!	ATTGAAATCAATATGTACTT+GGG	+	chr1_4:5698730-5698749	Msa0145980:intron	20.0%
!!	TATTGAAATCAATATGTACT+TGG	+	chr1_4:5698729-5698748	Msa0145980:intron	20.0%
!!	ATTGAAATCAATATGTACTT+GGG	+	chr1_4:5698730-5698749	Msa0145980:intron	20.0%
!!!	TTTAATTGTTCTTGTTTATC+TGG	+	chr1_4:5698881-5698900	Msa0145980:intron	20.0%
!!!	TTAATTGTTCTTGTTTATCT+GGG	+	chr1_4:5698882-5698901	Msa0145980:intron	20.0%
!!!	GAAAATAATGTTTTTGGTTT+AGG	+	chr1_4:5699231-5699250	Msa0145980:intron	20.0%
!!!	TTTTTACTTCTGAATTAACT+TGG	-	chr1_4:5699548-5699567	None:intergenic	20.0%
!!	AAACTATTGCTTAAAATCTA+TGG	+	chr1_4:5699566-5699585	Msa0145980:intron	20.0%
!!!	AGTGAAAAAAATGTTGTTTT+TGG	+	chr1_4:5700076-5700095	Msa0145980:three_prime_UTR	20.0%
!!!	GTGAAAAAAATGTTGTTTTT+GGG	+	chr1_4:5700077-5700096	Msa0145980:three_prime_UTR	20.0%
!!	ATTCCACTACATAAATTAAA+CGG	+	chr1_4:5700210-5700229	Msa0145980:three_prime_UTR	20.0%
!!	TGATATAGTGATTAATATAG+TGG	-	chr1_4:5700261-5700280	None:intergenic	20.0%
!!!	ACATATAGATAATGGTATAT+AGG	-	chr1_4:5700316-5700335	None:intergenic	20.0%
!!	TGATTTGAACATATAGATAA+TGG	-	chr1_4:5700324-5700343	None:intergenic	20.0%
!	TAACTATCTAGTAATGAGAT+GGG	+	chr1_4:5698542-5698561	Msa0145980:intron	25.0%
!!!	AGATTCTTGGTTTTTAATTG+TGG	+	chr1_4:5698608-5698627	Msa0145980:intron	25.0%
!	ACCATGTCTCAATATTAAAA+TGG	-	chr1_4:5698930-5698949	None:intergenic	25.0%
!	ATCTCTTATATTCAAGTATC+TGG	-	chr1_4:5699034-5699053	None:intergenic	25.0%
!	TGCTTAAATTATTCACAATG+TGG	+	chr1_4:5699255-5699274	Msa0145980:intron	25.0%
!!!	ATGTTTGTGCTTTTTACTTA+TGG	+	chr1_4:5699450-5699469	Msa0145980:intron	25.0%
!	TTATGGAAAAAAGTCTTGAT+AGG	+	chr1_4:5699467-5699486	Msa0145980:intron	25.0%
!	GATAGGTATATTGATGTTTA+TGG	+	chr1_4:5699484-5699503	Msa0145980:intron	25.0%
!!!	TTTACCCAGTTTTTTATACA+AGG	+	chr1_4:5699717-5699736	Msa0145980:intron	25.0%
!!!	TTACCCAGTTTTTTATACAA+GGG	+	chr1_4:5699718-5699737	Msa0145980:intron	25.0%
!	ATTACTTGAGAAGAATAAAG+TGG	+	chr1_4:5699758-5699777	Msa0145980:intron	25.0%
!	TTACTTGAGAAGAATAAAGT+GGG	+	chr1_4:5699759-5699778	Msa0145980:intron	25.0%
!	CTGAGGTAATTAAAAAATTC+TGG	-	chr1_4:5699790-5699809	None:intergenic	25.0%
!	ATAATGGTATATAGGTTATG+TGG	-	chr1_4:5700308-5700327	None:intergenic	25.0%
!	TAACTATCTAGTAATGAGAT+GGG	+	chr1_4:5698542-5698561	Msa0145980:intron	25.0%
!!!	AGATTCTTGGTTTTTAATTG+TGG	+	chr1_4:5698608-5698627	Msa0145980:intron	25.0%
!	ACCATGTCTCAATATTAAAA+TGG	-	chr1_4:5698930-5698949	None:intergenic	25.0%
!	ATCTCTTATATTCAAGTATC+TGG	-	chr1_4:5699034-5699053	None:intergenic	25.0%
!	TGCTTAAATTATTCACAATG+TGG	+	chr1_4:5699255-5699274	Msa0145980:intron	25.0%
!!!	ATGTTTGTGCTTTTTACTTA+TGG	+	chr1_4:5699450-5699469	Msa0145980:intron	25.0%
!	TTATGGAAAAAAGTCTTGAT+AGG	+	chr1_4:5699467-5699486	Msa0145980:intron	25.0%
!	GATAGGTATATTGATGTTTA+TGG	+	chr1_4:5699484-5699503	Msa0145980:intron	25.0%
!!!	TTTACCCAGTTTTTTATACA+AGG	+	chr1_4:5699717-5699736	Msa0145980:intron	25.0%
!!!	TTACCCAGTTTTTTATACAA+GGG	+	chr1_4:5699718-5699737	Msa0145980:intron	25.0%
!	ATTACTTGAGAAGAATAAAG+TGG	+	chr1_4:5699758-5699777	Msa0145980:intron	25.0%
!	TTACTTGAGAAGAATAAAGT+GGG	+	chr1_4:5699759-5699778	Msa0145980:intron	25.0%
!	CTGAGGTAATTAAAAAATTC+TGG	-	chr1_4:5699790-5699809	None:intergenic	25.0%
!	ATAATGGTATATAGGTTATG+TGG	-	chr1_4:5700308-5700327	None:intergenic	25.0%
	CATTACTAGATAGTTACCTT+TGG	-	chr1_4:5698538-5698557	None:intergenic	30.0%
	GTAACTATCTAGTAATGAGA+TGG	+	chr1_4:5698541-5698560	Msa0145980:intron	30.0%
!!	GCCATTTTAATATTGAGACA+TGG	+	chr1_4:5698926-5698945	Msa0145980:intron	30.0%
	GATATTTATAGCATGCTTGT+AGG	+	chr1_4:5699105-5699124	Msa0145980:intron	30.0%
	ATGTTTATGGAGAAGTTGAA+TGG	+	chr1_4:5699497-5699516	Msa0145980:intron	30.0%
!!!	AGTTTTTTCTAGTTAGCTGT+TGG	+	chr1_4:5699646-5699665	Msa0145980:intron	30.0%
	TAAAAAACTGGGTAAAAGCT+AGG	-	chr1_4:5699713-5699732	None:intergenic	30.0%
	CTTCCCTTGTATAAAAAACT+GGG	-	chr1_4:5699724-5699743	None:intergenic	30.0%
	ACTTCCCTTGTATAAAAAAC+TGG	-	chr1_4:5699725-5699744	None:intergenic	30.0%
	TCTACTGTAATAATCAACTG+AGG	-	chr1_4:5699807-5699826	None:intergenic	30.0%
	ATTATTACAGTAGACAGTTG+TGG	+	chr1_4:5699813-5699832	Msa0145980:intron	30.0%
!	TCCTGTGAAAAACATGTTTT+GGG	+	chr1_4:5700034-5700053	Msa0145980:three_prime_UTR	30.0%
!!	TAAAACTTGGTTGTTGGTTT+GGG	-	chr1_4:5700177-5700196	None:intergenic	30.0%
!	ATAAAACTTGGTTGTTGGTT+TGG	-	chr1_4:5700178-5700197	None:intergenic	30.0%
	GCGTCATTGTTCTATTATAT+AGG	+	chr1_4:5700232-5700251	Msa0145980:three_prime_UTR	30.0%
!!	TTTCGACCATGTTTTTATGT+AGG	+	chr1_4:5700355-5700374	Msa0145980:three_prime_UTR	30.0%
	GTAGTACCTACATAAAAACA+TGG	-	chr1_4:5700364-5700383	None:intergenic	30.0%
	CATTACTAGATAGTTACCTT+TGG	-	chr1_4:5698538-5698557	None:intergenic	30.0%
	GTAACTATCTAGTAATGAGA+TGG	+	chr1_4:5698541-5698560	Msa0145980:intron	30.0%
!!	GCCATTTTAATATTGAGACA+TGG	+	chr1_4:5698926-5698945	Msa0145980:intron	30.0%
	GATATTTATAGCATGCTTGT+AGG	+	chr1_4:5699105-5699124	Msa0145980:intron	30.0%
	ATGTTTATGGAGAAGTTGAA+TGG	+	chr1_4:5699497-5699516	Msa0145980:intron	30.0%
!!!	AGTTTTTTCTAGTTAGCTGT+TGG	+	chr1_4:5699646-5699665	Msa0145980:intron	30.0%
	TAAAAAACTGGGTAAAAGCT+AGG	-	chr1_4:5699713-5699732	None:intergenic	30.0%
	CTTCCCTTGTATAAAAAACT+GGG	-	chr1_4:5699724-5699743	None:intergenic	30.0%
	ACTTCCCTTGTATAAAAAAC+TGG	-	chr1_4:5699725-5699744	None:intergenic	30.0%
	TCTACTGTAATAATCAACTG+AGG	-	chr1_4:5699807-5699826	None:intergenic	30.0%
	ATTATTACAGTAGACAGTTG+TGG	+	chr1_4:5699813-5699832	Msa0145980:intron	30.0%
!	TCCTGTGAAAAACATGTTTT+GGG	+	chr1_4:5700034-5700053	Msa0145980:three_prime_UTR	30.0%
!!	TAAAACTTGGTTGTTGGTTT+GGG	-	chr1_4:5700177-5700196	None:intergenic	30.0%
!	ATAAAACTTGGTTGTTGGTT+TGG	-	chr1_4:5700178-5700197	None:intergenic	30.0%
	GCGTCATTGTTCTATTATAT+AGG	+	chr1_4:5700232-5700251	Msa0145980:three_prime_UTR	30.0%
!!	TTTCGACCATGTTTTTATGT+AGG	+	chr1_4:5700355-5700374	Msa0145980:three_prime_UTR	30.0%
	GTAGTACCTACATAAAAACA+TGG	-	chr1_4:5700364-5700383	None:intergenic	30.0%
	GCTTAAATGGATAATCTGGT+GGG	-	chr1_4:5698513-5698532	None:intergenic	35.0%
	TTATCCATTTAAGCCACCAA+AGG	+	chr1_4:5698519-5698538	Msa0145980:CDS	35.0%
	TACTAGATAGTTACCTTTGG+TGG	-	chr1_4:5698535-5698554	None:intergenic	35.0%
	TTTGACCTTAGCAATACATC+CGG	-	chr1_4:5698642-5698661	None:intergenic	35.0%
	TGTATTGCTAAGGTCAAATG+CGG	+	chr1_4:5698644-5698663	Msa0145980:intron	35.0%
	TTGTTGTCATGATGTAGTTG+AGG	+	chr1_4:5698682-5698701	Msa0145980:intron	35.0%
	AATCCATGTTACCACAATTG+AGG	-	chr1_4:5698708-5698727	None:intergenic	35.0%
	ATATCAAAGCAGAACCTTCA+TGG	+	chr1_4:5698977-5698996	Msa0145980:intron	35.0%
	ATGGTTCATGTCATTGACAT+AGG	+	chr1_4:5698996-5699015	Msa0145980:intron	35.0%
!	ATCTTTTCTCCCTTTTCTTG+AGG	+	chr1_4:5699164-5699183	Msa0145980:intron	35.0%
!	ATTCACAATGTGGCTTTTGT+AGG	+	chr1_4:5699265-5699284	Msa0145980:intron	35.0%
	TACGATAATATGCCTTGGTT+GGG	+	chr1_4:5699393-5699412	Msa0145980:intron	35.0%
	CAATAAGTTAATCCCAACCA+AGG	-	chr1_4:5699408-5699427	None:intergenic	35.0%
	TTATGGAGAAGTTGAATGGT+AGG	+	chr1_4:5699501-5699520	Msa0145980:intron	35.0%
	TATGGAGAAGTTGAATGGTA+GGG	+	chr1_4:5699502-5699521	Msa0145980:intron	35.0%
	GATTTATCTTGTATTGCTGC+AGG	+	chr1_4:5699842-5699861	Msa0145980:intron	35.0%
!	TTTGTCAGTCTTGTACATGT+GGG	-	chr1_4:5699934-5699953	None:intergenic	35.0%
!!	ACAAATGCTTGTGGTTCTAA+AGG	+	chr1_4:5700009-5700028	Msa0145980:three_prime_UTR	35.0%
!	CTCCTGTGAAAAACATGTTT+TGG	+	chr1_4:5700033-5700052	Msa0145980:three_prime_UTR	35.0%
!	TCCCAAAACATGTTTTTCAC+AGG	-	chr1_4:5700038-5700057	None:intergenic	35.0%
!!!	AACATGTTTTGGGATGCAAA+AGG	+	chr1_4:5700044-5700063	Msa0145980:three_prime_UTR	35.0%
	TCACTTAGTCGGATAAAACT+TGG	-	chr1_4:5700190-5700209	None:intergenic	35.0%
!	TGTAGTGGAATTCACTTAGT+CGG	-	chr1_4:5700201-5700220	None:intergenic	35.0%
!	ACGCCGTTTAATTTATGTAG+TGG	-	chr1_4:5700216-5700235	None:intergenic	35.0%
	GGTATATAGGTTATGTGGTA+AGG	-	chr1_4:5700303-5700322	None:intergenic	35.0%
	GCTTAAATGGATAATCTGGT+GGG	-	chr1_4:5698513-5698532	None:intergenic	35.0%
	TTATCCATTTAAGCCACCAA+AGG	+	chr1_4:5698519-5698538	Msa0145980:CDS	35.0%
	TACTAGATAGTTACCTTTGG+TGG	-	chr1_4:5698535-5698554	None:intergenic	35.0%
	TTTGACCTTAGCAATACATC+CGG	-	chr1_4:5698642-5698661	None:intergenic	35.0%
	TGTATTGCTAAGGTCAAATG+CGG	+	chr1_4:5698644-5698663	Msa0145980:intron	35.0%
	TTGTTGTCATGATGTAGTTG+AGG	+	chr1_4:5698682-5698701	Msa0145980:intron	35.0%
	AATCCATGTTACCACAATTG+AGG	-	chr1_4:5698708-5698727	None:intergenic	35.0%
	ATATCAAAGCAGAACCTTCA+TGG	+	chr1_4:5698977-5698996	Msa0145980:intron	35.0%
	ATGGTTCATGTCATTGACAT+AGG	+	chr1_4:5698996-5699015	Msa0145980:intron	35.0%
!	ATCTTTTCTCCCTTTTCTTG+AGG	+	chr1_4:5699164-5699183	Msa0145980:intron	35.0%
!	ATTCACAATGTGGCTTTTGT+AGG	+	chr1_4:5699265-5699284	Msa0145980:intron	35.0%
	TACGATAATATGCCTTGGTT+GGG	+	chr1_4:5699393-5699412	Msa0145980:intron	35.0%
	CAATAAGTTAATCCCAACCA+AGG	-	chr1_4:5699408-5699427	None:intergenic	35.0%
	TTATGGAGAAGTTGAATGGT+AGG	+	chr1_4:5699501-5699520	Msa0145980:intron	35.0%
	TATGGAGAAGTTGAATGGTA+GGG	+	chr1_4:5699502-5699521	Msa0145980:intron	35.0%
	GATTTATCTTGTATTGCTGC+AGG	+	chr1_4:5699842-5699861	Msa0145980:intron	35.0%
!	TTTGTCAGTCTTGTACATGT+GGG	-	chr1_4:5699934-5699953	None:intergenic	35.0%
!!	ACAAATGCTTGTGGTTCTAA+AGG	+	chr1_4:5700009-5700028	Msa0145980:three_prime_UTR	35.0%
!	CTCCTGTGAAAAACATGTTT+TGG	+	chr1_4:5700033-5700052	Msa0145980:three_prime_UTR	35.0%
!	TCCCAAAACATGTTTTTCAC+AGG	-	chr1_4:5700038-5700057	None:intergenic	35.0%
!!!	AACATGTTTTGGGATGCAAA+AGG	+	chr1_4:5700044-5700063	Msa0145980:three_prime_UTR	35.0%
	TCACTTAGTCGGATAAAACT+TGG	-	chr1_4:5700190-5700209	None:intergenic	35.0%
!	TGTAGTGGAATTCACTTAGT+CGG	-	chr1_4:5700201-5700220	None:intergenic	35.0%
!	ACGCCGTTTAATTTATGTAG+TGG	-	chr1_4:5700216-5700235	None:intergenic	35.0%
	GGTATATAGGTTATGTGGTA+AGG	-	chr1_4:5700303-5700322	None:intergenic	35.0%
!	TAGTAGCTTGCCAATGAAAC+AGG	-	chr1_4:5698432-5698451	None:intergenic	40.0%
	TCATTGGCAAGCTACTATCA+TGG	+	chr1_4:5698435-5698454	Msa0145980:exon	40.0%
	CATTGGCAAGCTACTATCAT+GGG	+	chr1_4:5698436-5698455	Msa0145980:exon	40.0%
	ATAATCTGGTGGGAAGTGAA+TGG	-	chr1_4:5698503-5698522	None:intergenic	40.0%
	GGCTTAAATGGATAATCTGG+TGG	-	chr1_4:5698514-5698533	None:intergenic	40.0%
	GGTGGCTTAAATGGATAATC+TGG	-	chr1_4:5698517-5698536	None:intergenic	40.0%
!	GTTACCTTTGGTGGCTTAAA+TGG	-	chr1_4:5698526-5698545	None:intergenic	40.0%
	TTTAATTGTGGTCTGTGTCC+CGG	+	chr1_4:5698620-5698639	Msa0145980:intron	40.0%
	TTGACCTTAGCAATACATCC+GGG	-	chr1_4:5698641-5698660	None:intergenic	40.0%
	AATATGTACTTGGGCTGATG+TGG	+	chr1_4:5698739-5698758	Msa0145980:intron	40.0%
	GGCTGATGTGGATTTAATTG+TGG	+	chr1_4:5698751-5698770	Msa0145980:intron	40.0%
	TTGTGGTCATGTTGTAGTTG+AGG	+	chr1_4:5698768-5698787	Msa0145980:intron	40.0%
	AATCCATGTGACCACAATTG+AGG	-	chr1_4:5698794-5698813	None:intergenic	40.0%
	AATGGCTAAACGCAATGACA+TGG	-	chr1_4:5698912-5698931	None:intergenic	40.0%
	GTCAATGACATGAACCATGA+AGG	-	chr1_4:5698994-5699013	None:intergenic	40.0%
	ATGTCATTGACATAGGCTGA+TGG	+	chr1_4:5699003-5699022	Msa0145980:intron	40.0%
	TGTCATTGACATAGGCTGAT+GGG	+	chr1_4:5699004-5699023	Msa0145980:intron	40.0%
!	TTCTCCCTTTTCTTGAGGAA+CGG	+	chr1_4:5699169-5699188	Msa0145980:intron	40.0%
	AACTCCGTTCCTCAAGAAAA+GGG	-	chr1_4:5699176-5699195	None:intergenic	40.0%
!	GTGGAACACTTTTGTTCGAA+AGG	-	chr1_4:5699294-5699313	None:intergenic	40.0%
	ACCCTAACATCAACAGCAAT+GGG	+	chr1_4:5699312-5699331	Msa0145980:CDS	40.0%
!	TCCCATTGCTGTTGATGTTA+GGG	-	chr1_4:5699316-5699335	None:intergenic	40.0%
!	TTGACATTCTGAAAGAGCAG+TGG	+	chr1_4:5699345-5699364	Msa0145980:CDS	40.0%
!	GAAGGTACGATAATATGCCT+TGG	+	chr1_4:5699388-5699407	Msa0145980:intron	40.0%
	GTACGATAATATGCCTTGGT+TGG	+	chr1_4:5699392-5699411	Msa0145980:intron	40.0%
	TTGTACATGTGGGCAATATC+AGG	-	chr1_4:5699924-5699943	None:intergenic	40.0%
!	CTTTGTCAGTCTTGTACATG+TGG	-	chr1_4:5699935-5699954	None:intergenic	40.0%
!	ATATTTCTGAGTCCAAGACC+GGG	-	chr1_4:5699976-5699995	None:intergenic	40.0%
!	CATATTTCTGAGTCCAAGAC+CGG	-	chr1_4:5699977-5699996	None:intergenic	40.0%
	TGAACTAGCACAAATGCTTG+TGG	+	chr1_4:5700000-5700019	Msa0145980:exon	40.0%
!!!	GTTGTTTTTGGGATGCATGT+TGG	+	chr1_4:5700088-5700107	Msa0145980:three_prime_UTR	40.0%
	GTCGGATAAAACTTGGTTGT+TGG	-	chr1_4:5700183-5700202	None:intergenic	40.0%
!	TAGTAGCTTGCCAATGAAAC+AGG	-	chr1_4:5698432-5698451	None:intergenic	40.0%
	TCATTGGCAAGCTACTATCA+TGG	+	chr1_4:5698435-5698454	Msa0145980:exon	40.0%
	CATTGGCAAGCTACTATCAT+GGG	+	chr1_4:5698436-5698455	Msa0145980:exon	40.0%
	ATAATCTGGTGGGAAGTGAA+TGG	-	chr1_4:5698503-5698522	None:intergenic	40.0%
	GGCTTAAATGGATAATCTGG+TGG	-	chr1_4:5698514-5698533	None:intergenic	40.0%
	GGTGGCTTAAATGGATAATC+TGG	-	chr1_4:5698517-5698536	None:intergenic	40.0%
!	GTTACCTTTGGTGGCTTAAA+TGG	-	chr1_4:5698526-5698545	None:intergenic	40.0%
	TTTAATTGTGGTCTGTGTCC+CGG	+	chr1_4:5698620-5698639	Msa0145980:intron	40.0%
	TTGACCTTAGCAATACATCC+GGG	-	chr1_4:5698641-5698660	None:intergenic	40.0%
	AATATGTACTTGGGCTGATG+TGG	+	chr1_4:5698739-5698758	Msa0145980:intron	40.0%
	GGCTGATGTGGATTTAATTG+TGG	+	chr1_4:5698751-5698770	Msa0145980:intron	40.0%
	TTGTGGTCATGTTGTAGTTG+AGG	+	chr1_4:5698768-5698787	Msa0145980:intron	40.0%
	AATCCATGTGACCACAATTG+AGG	-	chr1_4:5698794-5698813	None:intergenic	40.0%
	AATGGCTAAACGCAATGACA+TGG	-	chr1_4:5698912-5698931	None:intergenic	40.0%
	GTCAATGACATGAACCATGA+AGG	-	chr1_4:5698994-5699013	None:intergenic	40.0%
	ATGTCATTGACATAGGCTGA+TGG	+	chr1_4:5699003-5699022	Msa0145980:intron	40.0%
	TGTCATTGACATAGGCTGAT+GGG	+	chr1_4:5699004-5699023	Msa0145980:intron	40.0%
!	TTCTCCCTTTTCTTGAGGAA+CGG	+	chr1_4:5699169-5699188	Msa0145980:intron	40.0%
	AACTCCGTTCCTCAAGAAAA+GGG	-	chr1_4:5699176-5699195	None:intergenic	40.0%
!	GTGGAACACTTTTGTTCGAA+AGG	-	chr1_4:5699294-5699313	None:intergenic	40.0%
	ACCCTAACATCAACAGCAAT+GGG	+	chr1_4:5699312-5699331	Msa0145980:CDS	40.0%
!	TCCCATTGCTGTTGATGTTA+GGG	-	chr1_4:5699316-5699335	None:intergenic	40.0%
!	TTGACATTCTGAAAGAGCAG+TGG	+	chr1_4:5699345-5699364	Msa0145980:CDS	40.0%
!	GAAGGTACGATAATATGCCT+TGG	+	chr1_4:5699388-5699407	Msa0145980:intron	40.0%
	GTACGATAATATGCCTTGGT+TGG	+	chr1_4:5699392-5699411	Msa0145980:intron	40.0%
	TTGTACATGTGGGCAATATC+AGG	-	chr1_4:5699924-5699943	None:intergenic	40.0%
!	CTTTGTCAGTCTTGTACATG+TGG	-	chr1_4:5699935-5699954	None:intergenic	40.0%
!	ATATTTCTGAGTCCAAGACC+GGG	-	chr1_4:5699976-5699995	None:intergenic	40.0%
!	CATATTTCTGAGTCCAAGAC+CGG	-	chr1_4:5699977-5699996	None:intergenic	40.0%
	TGAACTAGCACAAATGCTTG+TGG	+	chr1_4:5700000-5700019	Msa0145980:exon	40.0%
!!!	GTTGTTTTTGGGATGCATGT+TGG	+	chr1_4:5700088-5700107	Msa0145980:three_prime_UTR	40.0%
	GTCGGATAAAACTTGGTTGT+TGG	-	chr1_4:5700183-5700202	None:intergenic	40.0%
	AGGAATACACCACCAGCATA+AGG	-	chr1_4:5698475-5698494	None:intergenic	45.0%
	TGTAGTTGAGGCCTCAATTG+TGG	+	chr1_4:5698694-5698713	Msa0145980:intron	45.0%
	AGGCCTCAATTGTGGTAACA+TGG	+	chr1_4:5698702-5698721	Msa0145980:intron	45.0%
	TGTAGTTGAGGCCTCAATTG+TGG	+	chr1_4:5698694-5698713	Msa0145980:intron	45.0%
	CAACTCCGTTCCTCAAGAAA+AGG	-	chr1_4:5699177-5699196	None:intergenic	45.0%
!	CTTTTCTTGAGGAACGGAGT+TGG	+	chr1_4:5699175-5699194	Msa0145980:intron	45.0%
!	CATTGCTGTTGATGTTAGGG+TGG	-	chr1_4:5699313-5699332	None:intergenic	45.0%
	CACCCTAACATCAACAGCAA+TGG	+	chr1_4:5699311-5699330	Msa0145980:CDS	45.0%
!	CTCCCATTGCTGTTGATGTT+AGG	-	chr1_4:5699317-5699336	None:intergenic	45.0%
	TCCTGCTCTTACTGTTTCGA+AGG	+	chr1_4:5699370-5699389	Msa0145980:CDS	45.0%
	ACCTTCGAAACAGTAAGAGC+AGG	-	chr1_4:5699374-5699393	None:intergenic	45.0%
	AACTGGGTAAAAGCTAGGCA+AGG	-	chr1_4:5699708-5699727	None:intergenic	45.0%
	TCCAAACCCAGATGATCCTT+TGG	+	chr1_4:5699896-5699915	Msa0145980:CDS	45.0%
	ACCAAAGGATCATCTGGGTT+TGG	-	chr1_4:5699900-5699919	None:intergenic	45.0%
	ACATGGTCGAAACTCGACTT+AGG	-	chr1_4:5700347-5700366	None:intergenic	45.0%
	AGGAATACACCACCAGCATA+AGG	-	chr1_4:5698475-5698494	None:intergenic	45.0%
	TGTAGTTGAGGCCTCAATTG+TGG	+	chr1_4:5698694-5698713	Msa0145980:intron	45.0%
	AGGCCTCAATTGTGGTAACA+TGG	+	chr1_4:5698702-5698721	Msa0145980:intron	45.0%
	TGTAGTTGAGGCCTCAATTG+TGG	+	chr1_4:5698694-5698713	Msa0145980:intron	45.0%
	CAACTCCGTTCCTCAAGAAA+AGG	-	chr1_4:5699177-5699196	None:intergenic	45.0%
!	CTTTTCTTGAGGAACGGAGT+TGG	+	chr1_4:5699175-5699194	Msa0145980:intron	45.0%
!	CATTGCTGTTGATGTTAGGG+TGG	-	chr1_4:5699313-5699332	None:intergenic	45.0%
	CACCCTAACATCAACAGCAA+TGG	+	chr1_4:5699311-5699330	Msa0145980:CDS	45.0%
!	CTCCCATTGCTGTTGATGTT+AGG	-	chr1_4:5699317-5699336	None:intergenic	45.0%
	TCCTGCTCTTACTGTTTCGA+AGG	+	chr1_4:5699370-5699389	Msa0145980:CDS	45.0%
	ACCTTCGAAACAGTAAGAGC+AGG	-	chr1_4:5699374-5699393	None:intergenic	45.0%
	AACTGGGTAAAAGCTAGGCA+AGG	-	chr1_4:5699708-5699727	None:intergenic	45.0%
	TCCAAACCCAGATGATCCTT+TGG	+	chr1_4:5699896-5699915	Msa0145980:CDS	45.0%
	ACCAAAGGATCATCTGGGTT+TGG	-	chr1_4:5699900-5699919	None:intergenic	45.0%
	ACATGGTCGAAACTCGACTT+AGG	-	chr1_4:5700347-5700366	None:intergenic	45.0%
	GCAAGCTACTATCATGGGAC+CGG	+	chr1_4:5698441-5698460	Msa0145980:exon	50.0%
	GTGGGAAGTGAATGGTCACT+AGG	-	chr1_4:5698495-5698514	None:intergenic	50.0%
	GTGTCCCGGATGTATTGCTA+AGG	+	chr1_4:5698634-5698653	Msa0145980:intron	50.0%
	AAGGTCAAATGCGGCTGATG+TGG	+	chr1_4:5698653-5698672	Msa0145980:intron	50.0%
	AGGCCTCAATTGTGGTCACA+TGG	+	chr1_4:5698788-5698807	Msa0145980:intron	50.0%
	GCAGAGAGCAAATTGACAGC+AGG	-	chr1_4:5699869-5699888	None:intergenic	50.0%
	CAGGCACCAAAGGATCATCT+GGG	-	chr1_4:5699905-5699924	None:intergenic	50.0%
	TCAGGCACCAAAGGATCATC+TGG	-	chr1_4:5699906-5699925	None:intergenic	50.0%
	TGGGCAATATCAGGCACCAA+AGG	-	chr1_4:5699915-5699934	None:intergenic	50.0%
	CCAAGTATGAGACTACTGCC+CGG	+	chr1_4:5699955-5699974	Msa0145980:CDS	50.0%
	GCAAGCTACTATCATGGGAC+CGG	+	chr1_4:5698441-5698460	Msa0145980:exon	50.0%
	GTGGGAAGTGAATGGTCACT+AGG	-	chr1_4:5698495-5698514	None:intergenic	50.0%
	GTGTCCCGGATGTATTGCTA+AGG	+	chr1_4:5698634-5698653	Msa0145980:intron	50.0%
	AAGGTCAAATGCGGCTGATG+TGG	+	chr1_4:5698653-5698672	Msa0145980:intron	50.0%
	AGGCCTCAATTGTGGTCACA+TGG	+	chr1_4:5698788-5698807	Msa0145980:intron	50.0%
	GCAGAGAGCAAATTGACAGC+AGG	-	chr1_4:5699869-5699888	None:intergenic	50.0%
	CAGGCACCAAAGGATCATCT+GGG	-	chr1_4:5699905-5699924	None:intergenic	50.0%
	TCAGGCACCAAAGGATCATC+TGG	-	chr1_4:5699906-5699925	None:intergenic	50.0%
	TGGGCAATATCAGGCACCAA+AGG	-	chr1_4:5699915-5699934	None:intergenic	50.0%
	CCAAGTATGAGACTACTGCC+CGG	+	chr1_4:5699955-5699974	Msa0145980:CDS	50.0%
	CCAGCATAAGGACTGTCTGC+CGG	-	chr1_4:5698463-5698482	None:intergenic	55.0%
	GCAGACAGTCCTTATGCTGG+TGG	+	chr1_4:5698463-5698482	Msa0145980:CDS	55.0%
	CCGGGCAGTAGTCTCATACT+TGG	-	chr1_4:5699958-5699977	None:intergenic	55.0%
	ATGAGACTACTGCCCGGTCT+TGG	+	chr1_4:5699961-5699980	Msa0145980:CDS	55.0%
	CCAGCATAAGGACTGTCTGC+CGG	-	chr1_4:5698463-5698482	None:intergenic	55.0%
	GCAGACAGTCCTTATGCTGG+TGG	+	chr1_4:5698463-5698482	Msa0145980:CDS	55.0%
	CCGGGCAGTAGTCTCATACT+TGG	-	chr1_4:5699958-5699977	None:intergenic	55.0%
	ATGAGACTACTGCCCGGTCT+TGG	+	chr1_4:5699961-5699980	Msa0145980:CDS	55.0%
	CCGGCAGACAGTCCTTATGC+TGG	+	chr1_4:5698460-5698479	Msa0145980:CDS	60.0%
	CCGGCAGACAGTCCTTATGC+TGG	+	chr1_4:5698460-5698479	Msa0145980:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr1_4	gene	5698424	5700400	5698424	ID=Msa0145980;Name=Msa0145980
chr1_4	mRNA	5698424	5700400	5698424	ID=Msa0145980-mRNA-1;Parent=Msa0145980;Name=Msa0145980-mRNA-1;_AED=0.03;_eAED=0.03;_QI=30\|1\|1\|1\|1\|1\|3\|393\|111
chr1_4	exon	5698424	5698540	5698424	ID=Msa0145980-mRNA-1:exon:2410;Parent=Msa0145980-mRNA-1
chr1_4	exon	5699287	5699391	5699287	ID=Msa0145980-mRNA-1:exon:2411;Parent=Msa0145980-mRNA-1
chr1_4	exon	5699864	5700400	5699864	ID=Msa0145980-mRNA-1:exon:2412;Parent=Msa0145980-mRNA-1
chr1_4	five_prime_UTR	5698424	5698453	5698424	ID=Msa0145980-mRNA-1:five_prime_utr;Parent=Msa0145980-mRNA-1
chr1_4	CDS	5698454	5698540	5698454	ID=Msa0145980-mRNA-1:cds;Parent=Msa0145980-mRNA-1
chr1_4	CDS	5699287	5699391	5699287	ID=Msa0145980-mRNA-1:cds;Parent=Msa0145980-mRNA-1
chr1_4	CDS	5699864	5700007	5699864	ID=Msa0145980-mRNA-1:cds;Parent=Msa0145980-mRNA-1
chr1_4	three_prime_UTR	5700008	5700400	5700008	ID=Msa0145980-mRNA-1:three_prime_utr;Parent=Msa0145980-mRNA-1

Gene Sequence	>Msa0145980 ATGGGACCGGCAGACAGTCCTTATGCTGGTGGTGTATTCCTAGTGACCATTCACTTCCCACCAGATTATCCATTTAAGCCACCAAAGGTTTCCTTTCGAACAAAAGTGTTCCACCCTAACATCAACAGCAATGGGAGTATCTGTCTTGACATTCTGAAAGAGCAGTGGAGTCCTGCTCTTACTGTTTCGAAGGTCCTGCTGTCAATTTGCTCTCTGCTGACAGATCCAAACCCAGATGATCCTTTGGTGCCTGATATTGCCCACATGTACAAGACTGACAAAGCCAAGTATGAGACTACTGCCCGGTCTTGGACTCAGAAATATGCGATGAACTAG
Protein sequence	>Msa0145980 MGPADSPYAGGVFLVTIHFPPDYPFKPPKVSFRTKVFHPNINSNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLVPDIAHMYKTDKAKYETTARSWTQKYAMN*