AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1143620

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1143620 MtrunA17_Chr8g0384061 96.589 645 21 1 1 644 1 645 0.0 1277
Msa1143620 MtrunA17_Chr3g0129821 55.075 670 221 13 8 644 6 628 0.0 622
Msa1143620 MtrunA17_Chr1g0146771 36.023 694 315 20 46 644 50 709 4.27e-127 391
Msa1143620 MtrunA17_Chr3g0127171 37.571 708 343 20 15 642 12 700 3.22e-126 389
Msa1143620 MtrunA17_Chr8g0388841 34.553 683 345 15 47 644 49 714 1.49e-113 356
Msa1143620 MtrunA17_Chr2g0317931 35.769 520 245 8 203 644 350 858 1.64e-92 304
Msa1143620 MtrunA17_Chr7g0238321 39.481 385 182 3 195 528 385 769 3.80e-80 273
Msa1143620 MtrunA17_Chr4g0067151 27.273 286 179 9 221 498 19 283 1.29e-25 108
Msa1143620 MtrunA17_Chr1g0185501 24.911 281 171 10 223 494 21 270 2.29e-18 86.7
Msa1143620 MtrunA17_Chr3g0136971 26.554 177 107 6 226 399 458 614 1.60e-13 73.9
Msa1143620 MtrunA17_Chr8g0352351 22.000 250 176 6 275 506 208 456 3.48e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1143620 AT1G48870.2 44.111 467 205 9 193 641 162 590 1.39e-120 371
Msa1143620 AT1G48870.3 44.111 467 205 9 193 641 162 590 1.39e-120 371
Msa1143620 AT1G48870.1 44.111 467 205 9 193 641 162 590 1.39e-120 371
Msa1143620 AT5G24320.1 34.891 685 339 15 40 644 37 694 8.24e-116 362
Msa1143620 AT5G24320.2 34.789 687 337 16 40 642 37 696 2.85e-114 358
Msa1143620 AT5G53500.2 40.535 523 230 14 172 642 159 652 1.30e-112 352
Msa1143620 AT5G53500.1 40.535 523 230 14 172 642 159 652 1.30e-112 352
Msa1143620 AT5G42010.1 37.681 552 238 16 166 644 191 709 1.22e-101 325
Msa1143620 AT1G64610.2 38.140 527 236 14 169 644 160 647 1.38e-101 323
Msa1143620 AT1G64610.1 38.140 527 236 14 169 644 160 647 1.38e-101 323
Msa1143620 AT3G15470.1 37.673 507 241 9 203 644 387 883 4.08e-97 318
Msa1143620 AT5G54200.1 37.549 514 252 11 193 644 319 825 1.98e-93 306
Msa1143620 AT5G42010.2 40.503 358 164 4 166 474 191 548 1.56e-80 266
Msa1143620 AT5G02430.1 34.749 518 256 9 204 644 386 898 3.72e-79 270
Msa1143620 AT2G37670.2 39.071 366 178 4 204 527 380 742 9.62e-75 258
Msa1143620 AT2G37670.1 39.071 366 178 4 204 527 379 741 1.06e-74 257
Msa1143620 AT3G49660.1 25.086 291 185 9 216 498 11 276 3.94e-22 98.2
Msa1143620 AT4G02730.1 26.814 317 188 12 188 494 5 287 1.19e-19 91.3
Msa1143620 AT2G43770.1 24.731 279 173 9 225 493 49 300 6.58e-16 80.1
Msa1143620 AT5G25150.1 27.684 177 105 6 226 399 457 613 1.23e-12 71.6
Msa1143620 AT5G25150.2 27.684 177 105 6 226 399 457 613 1.28e-12 71.6
Msa1143620 AT2G16405.1 28.105 153 91 2 244 395 188 322 2.11e-12 70.5

Find 162 sgRNAs with CRISPR-Local

Find 526 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCGATCCAATATGCAGATTT+TGG 0.140444 7_4:-19387048 None:intergenic
ATCAAGACATTCCACAATTT+TGG 0.147050 7_4:+19387821 Msa1143620:CDS
GTGAGGCAAAAGAAGAATTT+TGG 0.149020 7_4:+19385593 Msa1143620:CDS
TAATAAGTTGCTTAGAATTT+TGG 0.155363 7_4:+19387956 Msa1143620:three_prime_UTR
TCACCTTCTGGTAAAGTATC+TGG 0.167154 7_4:+19385451 Msa1143620:CDS
AGGACTCGCGCGTGTATATT+TGG 0.192771 7_4:+19387381 Msa1143620:CDS
CAGTCCCAATGGTCAGTATT+TGG 0.195556 7_4:+19385837 Msa1143620:CDS
TTTGTAGTTGGTTCTCTTAC+AGG 0.204905 7_4:+19386662 Msa1143620:CDS
AGAGTAAGTGGTTAATTAAT+TGG 0.226469 7_4:-19388254 None:intergenic
TTGATGGTAAAGTTCGAATA+TGG 0.250806 7_4:+19386436 Msa1143620:CDS
TGGCTTGCCTGTTAGGCTTT+AGG 0.253307 7_4:+19387841 Msa1143620:CDS
GCCTTCAATGTCGTGAATTT+AGG 0.264692 7_4:+19388098 Msa1143620:three_prime_UTR
CAACAAGATTACTGGCATTC+AGG 0.268264 7_4:+19386863 Msa1143620:CDS
TCTTGTTGGAAGATCTTAAA+AGG 0.284736 7_4:+19385518 Msa1143620:CDS
TAAAATTCCTCTCTAGAAAA+AGG 0.287150 7_4:+19384577 Msa1143620:five_prime_UTR
TTCCAGTGATATCTTGGATT+TGG 0.289851 7_4:+19385993 Msa1143620:CDS
TAATTCTCTGACAGTTGTTT+TGG 0.290037 7_4:-19387007 None:intergenic
CTTCTTTCCTTCACACTAAT+AGG 0.297940 7_4:-19385280 None:intergenic
GGTAATTGGTTCTTCATTGA+TGG 0.304868 7_4:+19387620 Msa1143620:CDS
CTTATTATACTTAGAATCTA+AGG 0.306553 7_4:-19387940 None:intergenic
AATGCAAGCATTTCACCTTC+TGG 0.331414 7_4:+19385439 Msa1143620:CDS
TCGATAATGGTAAAGCTAAT+AGG 0.334017 7_4:+19385620 Msa1143620:CDS
TTATTGACTGGGCAGATATA+CGG 0.336332 7_4:+19386478 Msa1143620:CDS
GATTTGTATATTTACACTTT+AGG 0.337337 7_4:+19388072 Msa1143620:three_prime_UTR
GATGACTGGTCGGTCACATT+GGG 0.337398 7_4:+19385379 Msa1143620:CDS
GCATATTCATTCATGGCTTA+AGG 0.339710 7_4:-19384242 None:intergenic
TCTTTACTCTATGGTCTGTT+AGG 0.339958 7_4:-19384202 None:intergenic
GAGCTATGCATATTCATTCA+TGG 0.343670 7_4:-19384249 None:intergenic
GAGCTCACAAAGGACTAATA+TGG 0.353947 7_4:+19385803 Msa1143620:CDS
TATTCGAACTTTACCATCAA+TGG 0.358267 7_4:-19386433 None:intergenic
AGCGATAACTCTTTACTCTA+TGG 0.371177 7_4:-19384211 None:intergenic
ATTTAGCTTACACTTCTTCC+AGG 0.372892 7_4:+19385326 Msa1143620:CDS
TTTATCAGTGGATCCATTGA+TGG 0.375545 7_4:+19386420 Msa1143620:CDS
TAATTGGTGAGAGAGATATT+TGG 0.377259 7_4:+19384999 Msa1143620:five_prime_UTR
TTCTGAAGCTGAAGTCTTGT+TGG 0.380038 7_4:+19385504 Msa1143620:CDS
TGATCTATTCTATGACTCAT+TGG 0.384024 7_4:+19385162 Msa1143620:CDS
ATCAACTAACAAAATGTTAG+AGG 0.387196 7_4:-19388156 None:intergenic
AGATTCCAAAATCTGCATAT+TGG 0.388192 7_4:+19387043 Msa1143620:CDS
GATTAAATATGTGATTTGTA+TGG 0.392101 7_4:+19388220 Msa1143620:three_prime_UTR
ACTCTACTACACTATTAGTT+AGG 0.394557 7_4:-19384342 None:intergenic
TGGTCATTCCAGTGATATCT+TGG 0.395337 7_4:+19385987 Msa1143620:CDS
TAATAGTGTAGTAGAGTAAC+TGG 0.396285 7_4:+19384348 Msa1143620:five_prime_UTR
GCATTAGGCAACAAGATTAC+TGG 0.396820 7_4:+19386855 Msa1143620:CDS
GCATTGTCCTAAAGCCTAAC+AGG 0.399732 7_4:-19387848 None:intergenic
TCAAGTTCTTGACAAATTCC+AGG 0.401016 7_4:+19388050 Msa1143620:three_prime_UTR
TCGCCACTTCAAGAATTGTT+TGG 0.405306 7_4:+19385967 Msa1143620:CDS
TCTGGGAAGTTGGTTCTCTC+TGG 0.410316 7_4:+19385469 Msa1143620:CDS
TTCAGAACCAAACCCTTCTT+CGG 0.411107 7_4:-19385215 None:intergenic
GATTTGGATTTACAATTTCA+AGG 0.415822 7_4:+19385028 Msa1143620:five_prime_UTR
CATGGAAAGAAGAAAGCATT+AGG 0.419424 7_4:+19386840 Msa1143620:CDS
CCCACTTGATGTAAATGAAC+CGG 0.420329 7_4:-19387336 None:intergenic
AAGTGTAAATATACAAATCC+TGG 0.424976 7_4:-19388068 None:intergenic
TGGATAAAACTGTTCGCGCT+TGG 0.427183 7_4:+19386154 Msa1143620:CDS
CATGTGCAGGGATTTGTAGT+TGG 0.427358 7_4:+19386650 Msa1143620:intron
CTAATGCTTTCTTCTTTCCA+TGG 0.431274 7_4:-19386839 None:intergenic
TGCAACAGTTACGCCCTTGA+AGG 0.436499 7_4:-19387471 None:intergenic
GATTCTTCTTTCGTCTTCGA+TGG 0.446992 7_4:+19386134 Msa1143620:intron
CAAATCAAACCTAGAGTAAG+TGG 0.447205 7_4:-19388266 None:intergenic
ATGGTCTGTTAGGTGGTCAT+AGG 0.451535 7_4:-19384192 None:intergenic
CACCTTCTGGTAAAGTATCT+GGG 0.458891 7_4:+19385452 Msa1143620:CDS
TCCGGTTCATTTACATCAAG+TGG 0.463250 7_4:+19387335 Msa1143620:CDS
TGAGAAGCATTGATGGCTAA+TGG 0.463686 7_4:-19384299 None:intergenic
TGATGGTAAAGTTCGAATAT+GGG 0.463939 7_4:+19386437 Msa1143620:CDS
GTGATATCTTGGATTTGGCC+TGG 0.468041 7_4:+19385998 Msa1143620:CDS
AAGATGGCGTTGTGCGCATA+TGG 0.468274 7_4:+19385872 Msa1143620:CDS
TGATGACTGGTCGGTCACAT+TGG 0.471379 7_4:+19385378 Msa1143620:CDS
ATTAATTAACCACTTACTCT+AGG 0.471804 7_4:+19388257 Msa1143620:three_prime_UTR
CTCAGAAGTAACCTCTAGCT+TGG 0.473947 7_4:-19387570 None:intergenic
TGTTTACCTCTGCATATGCT+TGG 0.476404 7_4:-19384620 None:intergenic
TTCAAGGCGTTGAAAAGTAG+TGG 0.478516 7_4:+19385044 Msa1143620:five_prime_UTR
CAAGAACTTGACATCCATCA+TGG 0.481303 7_4:-19388038 None:intergenic
CATGTTGGAAGTTTCTCCTC+AGG 0.483782 7_4:-19387674 None:intergenic
CTATCAGGCCTTCCATGGTC+AGG 0.488291 7_4:+19387302 Msa1143620:intron
GGGAAACATATCATTTCAGT+TGG 0.490890 7_4:+19387356 Msa1143620:CDS
AGTGGATTGAAGTGGTAAAG+TGG 0.491768 7_4:+19385062 Msa1143620:five_prime_UTR
TATTTATCTGCGCCTCAAGC+TGG 0.494606 7_4:-19386815 None:intergenic
TCGTTCTATCAGGCCTTCCA+TGG 0.502364 7_4:+19387297 Msa1143620:intron
TGGTTATATCATCTGCGTAC+AGG 0.505824 7_4:+19387998 Msa1143620:three_prime_UTR
TTCATTGATGGTACATGTCG+AGG 0.508863 7_4:+19387632 Msa1143620:CDS
CTAGCCAAATACTGACCATT+GGG 0.509035 7_4:-19385841 None:intergenic
AACTTCAATGACTTCAAAAG+TGG 0.509136 7_4:+19387404 Msa1143620:CDS
TATTGACTGGGCAGATATAC+GGG 0.510784 7_4:+19386479 Msa1143620:CDS
TTGGCTAGTGGAGGTGAAGA+TGG 0.511823 7_4:+19385856 Msa1143620:CDS
TTACTCTATGGTCTGTTAGG+TGG 0.513137 7_4:-19384199 None:intergenic
GCTATAAGTTATCAACAAGA+TGG 0.514520 7_4:+19386513 Msa1143620:CDS
GTGGATTGAAGTGGTAAAGT+GGG 0.514543 7_4:+19385063 Msa1143620:five_prime_UTR
GGAAGTTGGTTCTCTCTGGA+TGG 0.518254 7_4:+19385473 Msa1143620:CDS
GCCTAAATTCACGACATTGA+AGG 0.519406 7_4:-19388099 None:intergenic
ATGTCGTGAATTTAGGCCAC+AGG 0.520700 7_4:+19388105 Msa1143620:three_prime_UTR
ATAGTAGCAGCTGGCAGTGA+TGG 0.524175 7_4:+19387794 Msa1143620:CDS
CTATTAGTGTGAAGGAAAGA+AGG 0.531509 7_4:+19385281 Msa1143620:CDS
AATCATTGTCAAATCCATGA+TGG 0.532182 7_4:+19388024 Msa1143620:three_prime_UTR
TGGTAAAGTATCTGGGAAGT+TGG 0.533172 7_4:+19385459 Msa1143620:CDS
ACTAGCCAAATACTGACCAT+TGG 0.537399 7_4:-19385842 None:intergenic
GTGAAGAACGAGTTATTGAC+TGG 0.539351 7_4:+19386466 Msa1143620:CDS
ATCATTTGGAAGGGAAACAA+AGG 0.543245 7_4:-19385926 None:intergenic
TTTCTCTTGTGAACAAACCC+TGG 0.543560 7_4:-19385344 None:intergenic
AGGAAAATATTTCCAGCTTG+AGG 0.544685 7_4:+19386803 Msa1143620:intron
TGTCACGAAGATAGTAGCTA+TGG 0.545197 7_4:+19387740 Msa1143620:CDS
GAGAGGATCGTGGCAAGCAG+TGG 0.545339 7_4:+19385406 Msa1143620:CDS
TTTAGCTTACACTTCTTCCA+GGG 0.546525 7_4:+19385327 Msa1143620:CDS
TGGTCAGGAAGTCAGATGTC+CGG 0.560460 7_4:+19387317 Msa1143620:CDS
GGGTTTGGTTCTGAAAGGAG+AGG 0.560825 7_4:+19385223 Msa1143620:CDS
AATGAAAATTACTTTATCAG+TGG 0.560882 7_4:+19386408 Msa1143620:CDS
GGCCAAATCCAAGATATCAC+TGG 0.565834 7_4:-19385995 None:intergenic
CTGAGGAGAAACTTCCAACA+TGG 0.568255 7_4:+19387675 Msa1143620:CDS
TATTAGTGTGAAGGAAAGAA+GGG 0.568848 7_4:+19385282 Msa1143620:CDS
CAAGAGCACAGACAGAGAGA+AGG 0.571987 7_4:+19385571 Msa1143620:CDS
AAGAAGGGTTTGGTTCTGAA+AGG 0.572573 7_4:+19385218 Msa1143620:CDS
AAGGAATATATCAGAAACAT+GGG 0.572905 7_4:+19387763 Msa1143620:CDS
GAAGGGAAACAAAGGGAGGA+CGG 0.573342 7_4:-19385918 None:intergenic
CAAGCTAGAGGTTACTTCTG+AGG 0.574127 7_4:+19387571 Msa1143620:CDS
TCTGACTTCCTGACCATGGA+AGG 0.577834 7_4:-19387310 None:intergenic
AATGGTCAGTATTTGGCTAG+TGG 0.581244 7_4:+19385844 Msa1143620:CDS
GCACAGACAGAGAGAAGGTG+AGG 0.583206 7_4:+19385576 Msa1143620:CDS
AACATCAGGAAAGGCGACAA+AGG 0.583659 7_4:+19385667 Msa1143620:CDS
TCATTTGGAAGGGAAACAAA+GGG 0.585294 7_4:-19385925 None:intergenic
TACTTACCAAAGCCTTTGTG+AGG 0.587036 7_4:-19386210 None:intergenic
GAAGGAATATATCAGAAACA+TGG 0.587961 7_4:+19387762 Msa1143620:CDS
GAATGAGCCTATTAGTGTGA+AGG 0.589021 7_4:+19385273 Msa1143620:CDS
ACATATCATTTCAGTTGGAG+AGG 0.592725 7_4:+19387361 Msa1143620:CDS
TGACCAAACAATTCTTGAAG+TGG 0.593619 7_4:-19385970 None:intergenic
TTCCCAGATACTTTACCAGA+AGG 0.594322 7_4:-19385454 None:intergenic
ACAAGAGGTAAATCCCATGT+TGG 0.595289 7_4:-19387689 None:intergenic
AGGATTCTTTGCATGGCCTG+TGG 0.596299 7_4:-19388121 None:intergenic
CGGTCACATTGGGGTCGGAG+AGG 0.600622 7_4:+19385389 Msa1143620:CDS
ATGACTGGTCGGTCACATTG+GGG 0.606700 7_4:+19385380 Msa1143620:CDS
CTGGTCGGTCACATTGGGGT+CGG 0.607068 7_4:+19385384 Msa1143620:CDS
GCGTAACTGTTGCAATACCT+TGG 0.607882 7_4:+19387480 Msa1143620:CDS
GAAGGTGGATTTGAAGCTTG+TGG 0.612799 7_4:+19387978 Msa1143620:three_prime_UTR
AAGGCGGCGTGAGTATGAAG+TGG 0.612912 7_4:+19385537 Msa1143620:CDS
GAGTTCAGTGAGGTATACAT+TGG 0.614698 7_4:+19385769 Msa1143620:CDS
TCACATTCATCTTCTACAAG+AGG 0.615378 7_4:-19387704 None:intergenic
TGTTAGTTGATTTATATACC+AGG 0.615971 7_4:+19388168 Msa1143620:three_prime_UTR
GGTCTAACGATAGTAGCAGC+TGG 0.616322 7_4:+19387785 Msa1143620:CDS
CCGGTTCATTTACATCAAGT+GGG 0.623114 7_4:+19387336 Msa1143620:CDS
TACTTCTATGACATGGCCTG+AGG 0.623220 7_4:+19387658 Msa1143620:CDS
TAACAGGCAAGCCAAAATTG+TGG 0.625636 7_4:-19387832 None:intergenic
ACTTACCAAAGCCTTTGTGA+GGG 0.626300 7_4:-19386209 None:intergenic
GACATCTGACTTCCTGACCA+TGG 0.626991 7_4:-19387314 None:intergenic
GATGGTAAAGTTCGAATATG+GGG 0.630516 7_4:+19386438 Msa1143620:CDS
ACTATGAAATTCAGTCCCAA+TGG 0.634522 7_4:+19385826 Msa1143620:CDS
GAGGCGCAGATAAATATCCA+TGG 0.635034 7_4:+19386822 Msa1143620:CDS
GAATAAAACTCGTAGAGTGA+AGG 0.636114 7_4:+19385720 Msa1143620:CDS
ACGAAGATAGTAGCTATGGA+AGG 0.636891 7_4:+19387744 Msa1143620:CDS
TGGTTACCAAGCATATGCAG+AGG 0.639701 7_4:+19384614 Msa1143620:five_prime_UTR
TGAAAAGTAGTGGATTGAAG+TGG 0.641471 7_4:+19385054 Msa1143620:five_prime_UTR
GAGATTGTTCAGAAATACAA+AGG 0.642821 7_4:+19387074 Msa1143620:CDS
ATTGGGGTCGGAGAGGATCG+TGG 0.644123 7_4:+19385396 Msa1143620:CDS
TGAGGAGAAACTTCCAACAT+GGG 0.648751 7_4:+19387676 Msa1143620:CDS
GAGGTGGATGGAGTTCAGTG+AGG 0.649416 7_4:+19385759 Msa1143620:CDS
GGTCAGTATTTGGCTAGTGG+AGG 0.649574 7_4:+19385847 Msa1143620:CDS
GAGGTTCTACTTCTATGACA+TGG 0.678336 7_4:+19387651 Msa1143620:CDS
ACTCACATCTGAATTAGACC+AGG 0.684342 7_4:-19386016 None:intergenic
AAAATTGAAAACAATCAACA+TGG 0.686103 7_4:-19387870 None:intergenic
TGTTGGAAGATCTTAAAAGG+CGG 0.697921 7_4:+19385521 Msa1143620:CDS
CAAGAAATTAGAGCTCACAA+AGG 0.699622 7_4:+19385793 Msa1143620:CDS
TGAAGAACGAGTTATTGACT+GGG 0.701967 7_4:+19386467 Msa1143620:CDS
ACTGTTGCAATACCTTGGTG+TGG 0.716842 7_4:+19387485 Msa1143620:CDS
AGGAATATATCAGAAACATG+GGG 0.726541 7_4:+19387764 Msa1143620:CDS
TTTGGAAGGGAAACAAAGGG+AGG 0.738048 7_4:-19385922 None:intergenic
GGCATGAAAACAGATAGACG+TGG 0.825232 7_4:+19387506 Msa1143620:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAATATGAGTATAAATCA+TGG - chr7_4:19384467-19384486 None:intergenic 15.0%
!! TATAATAATCTATAGTCTAT+TGG + chr7_4:19384827-19384846 Msa1143620:intron 15.0%
!! ATAATAATCTATAGTCTATT+GGG + chr7_4:19384828-19384847 Msa1143620:intron 15.0%
!!! TTTTGTTTATGATGAAATTT+GGG + chr7_4:19385249-19385268 Msa1143620:CDS 15.0%
!! TCAATTTGAAAAATATCATT+TGG - chr7_4:19385943-19385962 None:intergenic 15.0%
!!! AAATGATATTTTTCAAATTG+AGG + chr7_4:19385942-19385961 Msa1143620:CDS 15.0%
!!! TTTAGAAACTATTTTATCTT+CGG - chr7_4:19386764-19386783 None:intergenic 15.0%
!! ATTAATATGAGTATAAATCA+TGG - chr7_4:19384467-19384486 None:intergenic 15.0%
!! TATAATAATCTATAGTCTAT+TGG + chr7_4:19384827-19384846 Msa1143620:intron 15.0%
!! ATAATAATCTATAGTCTATT+GGG + chr7_4:19384828-19384847 Msa1143620:intron 15.0%
!!! TTTTGTTTATGATGAAATTT+GGG + chr7_4:19385249-19385268 Msa1143620:CDS 15.0%
!! TCAATTTGAAAAATATCATT+TGG - chr7_4:19385943-19385962 None:intergenic 15.0%
!!! AAATGATATTTTTCAAATTG+AGG + chr7_4:19385942-19385961 Msa1143620:CDS 15.0%
!!! TTTAGAAACTATTTTATCTT+CGG - chr7_4:19386764-19386783 None:intergenic 15.0%
!! TAATAATCTATAGTCTATTG+GGG + chr7_4:19384829-19384848 Msa1143620:intron 20.0%
!!! GTTTTGTTTATGATGAAATT+TGG + chr7_4:19385248-19385267 Msa1143620:CDS 20.0%
!! TTGAAAAATATCATTTGGAA+GGG - chr7_4:19385938-19385957 None:intergenic 20.0%
!! TTTGAAAAATATCATTTGGA+AGG - chr7_4:19385939-19385958 None:intergenic 20.0%
!!! TAAAGTAATTTTCATTGACA+GGG - chr7_4:19386404-19386423 None:intergenic 20.0%
!!! ATAAAGTAATTTTCATTGAC+AGG - chr7_4:19386405-19386424 None:intergenic 20.0%
!! AATGAAAATTACTTTATCAG+TGG + chr7_4:19386408-19386427 Msa1143620:CDS 20.0%
!!! ATCAGATTTCTAATGATTTT+AGG + chr7_4:19386783-19386802 Msa1143620:intron 20.0%
!!! AAGCATTTTAATTTGTATTC+CGG + chr7_4:19386913-19386932 Msa1143620:intron 20.0%
!! AACAATTGAAGTACAAAATA+AGG - chr7_4:19386954-19386973 None:intergenic 20.0%
!! TTCTTCGAAAAAAATGAAAT+CGG + chr7_4:19387427-19387446 Msa1143620:CDS 20.0%
!! AAAATTGAAAACAATCAACA+TGG - chr7_4:19387873-19387892 None:intergenic 20.0%
!!! CAATTTTTCATGAAAAGTTT+TGG + chr7_4:19387886-19387905 Msa1143620:three_prime_UTR 20.0%
!! CTTATTATACTTAGAATCTA+AGG - chr7_4:19387943-19387962 None:intergenic 20.0%
!!! TAATAAGTTGCTTAGAATTT+TGG + chr7_4:19387956-19387975 Msa1143620:three_prime_UTR 20.0%
!! GATTTGTATATTTACACTTT+AGG + chr7_4:19388072-19388091 Msa1143620:three_prime_UTR 20.0%
!! GTTAGAGGATAAAAAAAAAA+AGG - chr7_4:19388144-19388163 None:intergenic 20.0%
!!! GATTAAATATGTGATTTGTA+TGG + chr7_4:19388220-19388239 Msa1143620:three_prime_UTR 20.0%
!! TAATAATCTATAGTCTATTG+GGG + chr7_4:19384829-19384848 Msa1143620:intron 20.0%
!!! GTTTTGTTTATGATGAAATT+TGG + chr7_4:19385248-19385267 Msa1143620:CDS 20.0%
!! TTGAAAAATATCATTTGGAA+GGG - chr7_4:19385938-19385957 None:intergenic 20.0%
!! TTTGAAAAATATCATTTGGA+AGG - chr7_4:19385939-19385958 None:intergenic 20.0%
!!! TAAAGTAATTTTCATTGACA+GGG - chr7_4:19386404-19386423 None:intergenic 20.0%
!!! ATAAAGTAATTTTCATTGAC+AGG - chr7_4:19386405-19386424 None:intergenic 20.0%
!! AATGAAAATTACTTTATCAG+TGG + chr7_4:19386408-19386427 Msa1143620:CDS 20.0%
!!! ATCAGATTTCTAATGATTTT+AGG + chr7_4:19386783-19386802 Msa1143620:intron 20.0%
!!! AAGCATTTTAATTTGTATTC+CGG + chr7_4:19386913-19386932 Msa1143620:intron 20.0%
!! AACAATTGAAGTACAAAATA+AGG - chr7_4:19386954-19386973 None:intergenic 20.0%
!! TTCTTCGAAAAAAATGAAAT+CGG + chr7_4:19387427-19387446 Msa1143620:CDS 20.0%
!! AAAATTGAAAACAATCAACA+TGG - chr7_4:19387873-19387892 None:intergenic 20.0%
!!! CAATTTTTCATGAAAAGTTT+TGG + chr7_4:19387886-19387905 Msa1143620:three_prime_UTR 20.0%
!! CTTATTATACTTAGAATCTA+AGG - chr7_4:19387943-19387962 None:intergenic 20.0%
!!! TAATAAGTTGCTTAGAATTT+TGG + chr7_4:19387956-19387975 Msa1143620:three_prime_UTR 20.0%
!! GATTTGTATATTTACACTTT+AGG + chr7_4:19388072-19388091 Msa1143620:three_prime_UTR 20.0%
!! GTTAGAGGATAAAAAAAAAA+AGG - chr7_4:19388144-19388163 None:intergenic 20.0%
!!! GATTAAATATGTGATTTGTA+TGG + chr7_4:19388220-19388239 Msa1143620:three_prime_UTR 20.0%
!! TTGAAATAAGAGAGAGTATA+TGG - chr7_4:19384513-19384532 None:intergenic 25.0%
!! TAAAATTCCTCTCTAGAAAA+AGG + chr7_4:19384577-19384596 Msa1143620:five_prime_UTR 25.0%
! ATTATTCTATTAGTGTTGTG+AGG + chr7_4:19384867-19384886 Msa1143620:intron 25.0%
! TGCAAATAAATCATTGTCAA+TGG + chr7_4:19384898-19384917 Msa1143620:intron 25.0%
!! ACTAGATTTTGTTGCATAAT+TGG + chr7_4:19384983-19385002 Msa1143620:intron 25.0%
!!! AGATATTTGGTCTTTTGATT+TGG + chr7_4:19385012-19385031 Msa1143620:five_prime_UTR 25.0%
! GATTTGGATTTACAATTTCA+AGG + chr7_4:19385028-19385047 Msa1143620:five_prime_UTR 25.0%
! TATAAAACAGATTGCAACAT+TGG - chr7_4:19386055-19386074 None:intergenic 25.0%
! TAACTAACTAAACATAGTTG+TGG - chr7_4:19386268-19386287 None:intergenic 25.0%
! AATGTTATGAACAAAGCATA+TGG - chr7_4:19386302-19386321 None:intergenic 25.0%
! CAAAAAATCGTGAAAATCAT+TGG - chr7_4:19386564-19386583 None:intergenic 25.0%
! TAATAGATTCATCAATCTCA+TGG - chr7_4:19386623-19386642 None:intergenic 25.0%
!! TATTACATTTTACATGTGCA+GGG + chr7_4:19386638-19386657 Msa1143620:intron 25.0%
!!! AAGGTTTTTTTCTTTCTTTC+CGG - chr7_4:19386935-19386954 None:intergenic 25.0%
! CTAAACAAGGTTTAAATTTG+TGG - chr7_4:19387130-19387149 None:intergenic 25.0%
!!! ATGTTTCTATTGATAGTGTT+TGG + chr7_4:19387241-19387260 Msa1143620:intron 25.0%
! AAGGAATATATCAGAAACAT+GGG + chr7_4:19387763-19387782 Msa1143620:CDS 25.0%
! AAGTGTAAATATACAAATCC+TGG - chr7_4:19388071-19388090 None:intergenic 25.0%
! AAAAAAAAGGATTCTTTGCA+TGG - chr7_4:19388131-19388150 None:intergenic 25.0%
! ATCAACTAACAAAATGTTAG+AGG - chr7_4:19388159-19388178 None:intergenic 25.0%
!! TGTTAGTTGATTTATATACC+AGG + chr7_4:19388168-19388187 Msa1143620:three_prime_UTR 25.0%
! AGAGTAAGTGGTTAATTAAT+TGG - chr7_4:19388257-19388276 None:intergenic 25.0%
!! TTGAAATAAGAGAGAGTATA+TGG - chr7_4:19384513-19384532 None:intergenic 25.0%
!! TAAAATTCCTCTCTAGAAAA+AGG + chr7_4:19384577-19384596 Msa1143620:five_prime_UTR 25.0%
! ATTATTCTATTAGTGTTGTG+AGG + chr7_4:19384867-19384886 Msa1143620:intron 25.0%
! TGCAAATAAATCATTGTCAA+TGG + chr7_4:19384898-19384917 Msa1143620:intron 25.0%
!! ACTAGATTTTGTTGCATAAT+TGG + chr7_4:19384983-19385002 Msa1143620:intron 25.0%
!!! AGATATTTGGTCTTTTGATT+TGG + chr7_4:19385012-19385031 Msa1143620:five_prime_UTR 25.0%
! GATTTGGATTTACAATTTCA+AGG + chr7_4:19385028-19385047 Msa1143620:five_prime_UTR 25.0%
! TATAAAACAGATTGCAACAT+TGG - chr7_4:19386055-19386074 None:intergenic 25.0%
! TAACTAACTAAACATAGTTG+TGG - chr7_4:19386268-19386287 None:intergenic 25.0%
! AATGTTATGAACAAAGCATA+TGG - chr7_4:19386302-19386321 None:intergenic 25.0%
! CAAAAAATCGTGAAAATCAT+TGG - chr7_4:19386564-19386583 None:intergenic 25.0%
! TAATAGATTCATCAATCTCA+TGG - chr7_4:19386623-19386642 None:intergenic 25.0%
!! TATTACATTTTACATGTGCA+GGG + chr7_4:19386638-19386657 Msa1143620:intron 25.0%
!!! AAGGTTTTTTTCTTTCTTTC+CGG - chr7_4:19386935-19386954 None:intergenic 25.0%
! CTAAACAAGGTTTAAATTTG+TGG - chr7_4:19387130-19387149 None:intergenic 25.0%
!!! ATGTTTCTATTGATAGTGTT+TGG + chr7_4:19387241-19387260 Msa1143620:intron 25.0%
! AAGGAATATATCAGAAACAT+GGG + chr7_4:19387763-19387782 Msa1143620:CDS 25.0%
! AAGTGTAAATATACAAATCC+TGG - chr7_4:19388071-19388090 None:intergenic 25.0%
! AAAAAAAAGGATTCTTTGCA+TGG - chr7_4:19388131-19388150 None:intergenic 25.0%
! ATCAACTAACAAAATGTTAG+AGG - chr7_4:19388159-19388178 None:intergenic 25.0%
!! TGTTAGTTGATTTATATACC+AGG + chr7_4:19388168-19388187 Msa1143620:three_prime_UTR 25.0%
! AGAGTAAGTGGTTAATTAAT+TGG - chr7_4:19388257-19388276 None:intergenic 25.0%
ACTCTACTACACTATTAGTT+AGG - chr7_4:19384345-19384364 None:intergenic 30.0%
TAATAGTGTAGTAGAGTAAC+TGG + chr7_4:19384348-19384367 Msa1143620:five_prime_UTR 30.0%
! CTGTTTTGTAGGAATAGAAA+AGG - chr7_4:19384407-19384426 None:intergenic 30.0%
! AAAAGGAAACCGTTTCTTTT+TGG + chr7_4:19384594-19384613 Msa1143620:five_prime_UTR 30.0%
! CATGCTTTTGAATTCAAAAG+TGG - chr7_4:19384759-19384778 None:intergenic 30.0%
! CACTTTTGAATTCAAAAGCA+TGG + chr7_4:19384757-19384776 Msa1143620:intron 30.0%
CCATATACTTAACATGAGAA+AGG - chr7_4:19384937-19384956 None:intergenic 30.0%
CCTTTCTCATGTTAAGTATA+TGG + chr7_4:19384934-19384953 Msa1143620:intron 30.0%
TAATTGGTGAGAGAGATATT+TGG + chr7_4:19384999-19385018 Msa1143620:five_prime_UTR 30.0%
TGATCTATTCTATGACTCAT+TGG + chr7_4:19385162-19385181 Msa1143620:CDS 30.0%
TATTAGTGTGAAGGAAAGAA+GGG + chr7_4:19385282-19385301 Msa1143620:CDS 30.0%
TCTTGTTGGAAGATCTTAAA+AGG + chr7_4:19385518-19385537 Msa1143620:CDS 30.0%
! TGAGGCAAAAGAAGAATTTT+GGG + chr7_4:19385594-19385613 Msa1143620:CDS 30.0%
!!! GAATTTTGGGATTTCGATAA+TGG + chr7_4:19385607-19385626 Msa1143620:CDS 30.0%
! TCGATAATGGTAAAGCTAAT+AGG + chr7_4:19385620-19385639 Msa1143620:CDS 30.0%
GTAAAGCTAATAGGAAAAAC+TGG + chr7_4:19385629-19385648 Msa1143620:CDS 30.0%
AGGTAAAGCAGAATAAAAAG+AGG + chr7_4:19385740-19385759 Msa1143620:CDS 30.0%
TAAAGCAGAATAAAAAGAGG+TGG + chr7_4:19385743-19385762 Msa1143620:CDS 30.0%
AACATAGTTGTGGAAAATAC+AGG - chr7_4:19386258-19386277 None:intergenic 30.0%
CTGTATCCAATTATAGAAGA+GGG - chr7_4:19386362-19386381 None:intergenic 30.0%
ACTGTATCCAATTATAGAAG+AGG - chr7_4:19386363-19386382 None:intergenic 30.0%
TATTCGAACTTTACCATCAA+TGG - chr7_4:19386436-19386455 None:intergenic 30.0%
! TTGATGGTAAAGTTCGAATA+TGG + chr7_4:19386436-19386455 Msa1143620:CDS 30.0%
TGATGGTAAAGTTCGAATAT+GGG + chr7_4:19386437-19386456 Msa1143620:CDS 30.0%
GCTATAAGTTATCAACAAGA+TGG + chr7_4:19386513-19386532 Msa1143620:CDS 30.0%
ACTTTGACAAAGAAATCTTG+CGG + chr7_4:19386597-19386616 Msa1143620:intron 30.0%
! CTATTACATTTTACATGTGC+AGG + chr7_4:19386637-19386656 Msa1143620:intron 30.0%
TACCTGAAGCAACATAAAAA+CGG - chr7_4:19386694-19386713 None:intergenic 30.0%
! TAATTCTCTGACAGTTGTTT+TGG - chr7_4:19387010-19387029 None:intergenic 30.0%
AGATTCCAAAATCTGCATAT+TGG + chr7_4:19387043-19387062 Msa1143620:CDS 30.0%
GAGATTGTTCAGAAATACAA+AGG + chr7_4:19387074-19387093 Msa1143620:CDS 30.0%
! TACAAAGGTACAACACTTAA+TGG + chr7_4:19387089-19387108 Msa1143620:intron 30.0%
!! CCTAAACAAAGTTCTAAACA+AGG - chr7_4:19387143-19387162 None:intergenic 30.0%
! CCTTGTTTAGAACTTTGTTT+AGG + chr7_4:19387140-19387159 Msa1143620:intron 30.0%
AACTTCAATGACTTCAAAAG+TGG + chr7_4:19387404-19387423 Msa1143620:CDS 30.0%
! TAACTTTTCTCACTATTCTC+TGG + chr7_4:19387538-19387557 Msa1143620:CDS 30.0%
!! AACGATTTTCTCTTGGTAAT+TGG + chr7_4:19387606-19387625 Msa1143620:CDS 30.0%
GAAGGAATATATCAGAAACA+TGG + chr7_4:19387762-19387781 Msa1143620:CDS 30.0%
AGGAATATATCAGAAACATG+GGG + chr7_4:19387764-19387783 Msa1143620:CDS 30.0%
! ATCAAGACATTCCACAATTT+TGG + chr7_4:19387821-19387840 Msa1143620:CDS 30.0%
!!! TTTCATGAAAAGTTTTGGCT+CGG + chr7_4:19387891-19387910 Msa1143620:three_prime_UTR 30.0%
!! TAAAGGTGTAAATTTTCACG+TGG + chr7_4:19387914-19387933 Msa1143620:three_prime_UTR 30.0%
! AAGTTGCTTAGAATTTTGGA+AGG + chr7_4:19387960-19387979 Msa1143620:three_prime_UTR 30.0%
AATCATTGTCAAATCCATGA+TGG + chr7_4:19388024-19388043 Msa1143620:three_prime_UTR 30.0%
ACTCTACTACACTATTAGTT+AGG - chr7_4:19384345-19384364 None:intergenic 30.0%
TAATAGTGTAGTAGAGTAAC+TGG + chr7_4:19384348-19384367 Msa1143620:five_prime_UTR 30.0%
! CTGTTTTGTAGGAATAGAAA+AGG - chr7_4:19384407-19384426 None:intergenic 30.0%
! AAAAGGAAACCGTTTCTTTT+TGG + chr7_4:19384594-19384613 Msa1143620:five_prime_UTR 30.0%
! CATGCTTTTGAATTCAAAAG+TGG - chr7_4:19384759-19384778 None:intergenic 30.0%
! CACTTTTGAATTCAAAAGCA+TGG + chr7_4:19384757-19384776 Msa1143620:intron 30.0%
CCATATACTTAACATGAGAA+AGG - chr7_4:19384937-19384956 None:intergenic 30.0%
CCTTTCTCATGTTAAGTATA+TGG + chr7_4:19384934-19384953 Msa1143620:intron 30.0%
TAATTGGTGAGAGAGATATT+TGG + chr7_4:19384999-19385018 Msa1143620:five_prime_UTR 30.0%
TGATCTATTCTATGACTCAT+TGG + chr7_4:19385162-19385181 Msa1143620:CDS 30.0%
TATTAGTGTGAAGGAAAGAA+GGG + chr7_4:19385282-19385301 Msa1143620:CDS 30.0%
TCTTGTTGGAAGATCTTAAA+AGG + chr7_4:19385518-19385537 Msa1143620:CDS 30.0%
! TGAGGCAAAAGAAGAATTTT+GGG + chr7_4:19385594-19385613 Msa1143620:CDS 30.0%
!!! GAATTTTGGGATTTCGATAA+TGG + chr7_4:19385607-19385626 Msa1143620:CDS 30.0%
! TCGATAATGGTAAAGCTAAT+AGG + chr7_4:19385620-19385639 Msa1143620:CDS 30.0%
GTAAAGCTAATAGGAAAAAC+TGG + chr7_4:19385629-19385648 Msa1143620:CDS 30.0%
AGGTAAAGCAGAATAAAAAG+AGG + chr7_4:19385740-19385759 Msa1143620:CDS 30.0%
TAAAGCAGAATAAAAAGAGG+TGG + chr7_4:19385743-19385762 Msa1143620:CDS 30.0%
AACATAGTTGTGGAAAATAC+AGG - chr7_4:19386258-19386277 None:intergenic 30.0%
CTGTATCCAATTATAGAAGA+GGG - chr7_4:19386362-19386381 None:intergenic 30.0%
ACTGTATCCAATTATAGAAG+AGG - chr7_4:19386363-19386382 None:intergenic 30.0%
TATTCGAACTTTACCATCAA+TGG - chr7_4:19386436-19386455 None:intergenic 30.0%
! TTGATGGTAAAGTTCGAATA+TGG + chr7_4:19386436-19386455 Msa1143620:CDS 30.0%
TGATGGTAAAGTTCGAATAT+GGG + chr7_4:19386437-19386456 Msa1143620:CDS 30.0%
GCTATAAGTTATCAACAAGA+TGG + chr7_4:19386513-19386532 Msa1143620:CDS 30.0%
ACTTTGACAAAGAAATCTTG+CGG + chr7_4:19386597-19386616 Msa1143620:intron 30.0%
! CTATTACATTTTACATGTGC+AGG + chr7_4:19386637-19386656 Msa1143620:intron 30.0%
TACCTGAAGCAACATAAAAA+CGG - chr7_4:19386694-19386713 None:intergenic 30.0%
! TAATTCTCTGACAGTTGTTT+TGG - chr7_4:19387010-19387029 None:intergenic 30.0%
AGATTCCAAAATCTGCATAT+TGG + chr7_4:19387043-19387062 Msa1143620:CDS 30.0%
GAGATTGTTCAGAAATACAA+AGG + chr7_4:19387074-19387093 Msa1143620:CDS 30.0%
! TACAAAGGTACAACACTTAA+TGG + chr7_4:19387089-19387108 Msa1143620:intron 30.0%
!! CCTAAACAAAGTTCTAAACA+AGG - chr7_4:19387143-19387162 None:intergenic 30.0%
! CCTTGTTTAGAACTTTGTTT+AGG + chr7_4:19387140-19387159 Msa1143620:intron 30.0%
AACTTCAATGACTTCAAAAG+TGG + chr7_4:19387404-19387423 Msa1143620:CDS 30.0%
! TAACTTTTCTCACTATTCTC+TGG + chr7_4:19387538-19387557 Msa1143620:CDS 30.0%
!! AACGATTTTCTCTTGGTAAT+TGG + chr7_4:19387606-19387625 Msa1143620:CDS 30.0%
GAAGGAATATATCAGAAACA+TGG + chr7_4:19387762-19387781 Msa1143620:CDS 30.0%
AGGAATATATCAGAAACATG+GGG + chr7_4:19387764-19387783 Msa1143620:CDS 30.0%
! ATCAAGACATTCCACAATTT+TGG + chr7_4:19387821-19387840 Msa1143620:CDS 30.0%
!!! TTTCATGAAAAGTTTTGGCT+CGG + chr7_4:19387891-19387910 Msa1143620:three_prime_UTR 30.0%
!! TAAAGGTGTAAATTTTCACG+TGG + chr7_4:19387914-19387933 Msa1143620:three_prime_UTR 30.0%
! AAGTTGCTTAGAATTTTGGA+AGG + chr7_4:19387960-19387979 Msa1143620:three_prime_UTR 30.0%
AATCATTGTCAAATCCATGA+TGG + chr7_4:19388024-19388043 Msa1143620:three_prime_UTR 30.0%
TCTTTACTCTATGGTCTGTT+AGG - chr7_4:19384205-19384224 None:intergenic 35.0%
AGCGATAACTCTTTACTCTA+TGG - chr7_4:19384214-19384233 None:intergenic 35.0%
GCATATTCATTCATGGCTTA+AGG - chr7_4:19384245-19384264 None:intergenic 35.0%
GAGCTATGCATATTCATTCA+TGG - chr7_4:19384252-19384271 None:intergenic 35.0%
!!! GTTTTGATGAGAAGCATTGA+TGG - chr7_4:19384309-19384328 None:intergenic 35.0%
TTGTAGGAATAGAAAAGGCA+AGG - chr7_4:19384402-19384421 None:intergenic 35.0%
! GCTTGGTAACCAAAAAGAAA+CGG - chr7_4:19384606-19384625 None:intergenic 35.0%
AATCTATAGTCTATTGGGGT+TGG + chr7_4:19384833-19384852 Msa1143620:intron 35.0%
!! TGAAAAGTAGTGGATTGAAG+TGG + chr7_4:19385054-19385073 Msa1143620:five_prime_UTR 35.0%
! GACTCATTGGATATTTTGTC+TGG + chr7_4:19385175-19385194 Msa1143620:CDS 35.0%
!!! ATTCTGTTTTAGCCGAAGAA+GGG + chr7_4:19385203-19385222 Msa1143620:CDS 35.0%
CTTCTTTCCTTCACACTAAT+AGG - chr7_4:19385283-19385302 None:intergenic 35.0%
CTATTAGTGTGAAGGAAAGA+AGG + chr7_4:19385281-19385300 Msa1143620:CDS 35.0%
! ATTTAGCTTACACTTCTTCC+AGG + chr7_4:19385326-19385345 Msa1143620:CDS 35.0%
! TTTAGCTTACACTTCTTCCA+GGG + chr7_4:19385327-19385346 Msa1143620:CDS 35.0%
!! AAACAACGAGTTTTGATGAC+TGG + chr7_4:19385365-19385384 Msa1143620:CDS 35.0%
TGTTGGAAGATCTTAAAAGG+CGG + chr7_4:19385521-19385540 Msa1143620:CDS 35.0%
! GTGAGGCAAAAGAAGAATTT+TGG + chr7_4:19385593-19385612 Msa1143620:CDS 35.0%
GAATAAAACTCGTAGAGTGA+AGG + chr7_4:19385720-19385739 Msa1143620:CDS 35.0%
CAAGAAATTAGAGCTCACAA+AGG + chr7_4:19385793-19385812 Msa1143620:CDS 35.0%
ACTATGAAATTCAGTCCCAA+TGG + chr7_4:19385826-19385845 Msa1143620:CDS 35.0%
TCATTTGGAAGGGAAACAAA+GGG - chr7_4:19385928-19385947 None:intergenic 35.0%
ATCATTTGGAAGGGAAACAA+AGG - chr7_4:19385929-19385948 None:intergenic 35.0%
TGACCAAACAATTCTTGAAG+TGG - chr7_4:19385973-19385992 None:intergenic 35.0%
TTCCAGTGATATCTTGGATT+TGG + chr7_4:19385993-19386012 Msa1143620:CDS 35.0%
ATGTTCAATGTCTAAGAGCA+TGG - chr7_4:19386326-19386345 None:intergenic 35.0%
ATTGTGCCCTCTTCTATAAT+TGG + chr7_4:19386353-19386372 Msa1143620:intron 35.0%
TTTATCAGTGGATCCATTGA+TGG + chr7_4:19386420-19386439 Msa1143620:CDS 35.0%
GATGGTAAAGTTCGAATATG+GGG + chr7_4:19386438-19386457 Msa1143620:CDS 35.0%
! TGAAGAACGAGTTATTGACT+GGG + chr7_4:19386467-19386486 Msa1143620:CDS 35.0%
! TTATTGACTGGGCAGATATA+CGG + chr7_4:19386478-19386497 Msa1143620:CDS 35.0%
! TTTGTAGTTGGTTCTCTTAC+AGG + chr7_4:19386662-19386681 Msa1143620:CDS 35.0%
AGGAAAATATTTCCAGCTTG+AGG + chr7_4:19386803-19386822 Msa1143620:intron 35.0%
CTAATGCTTTCTTCTTTCCA+TGG - chr7_4:19386842-19386861 None:intergenic 35.0%
!! CATGGAAAGAAGAAAGCATT+AGG + chr7_4:19386840-19386859 Msa1143620:CDS 35.0%
! TCGATCCAATATGCAGATTT+TGG - chr7_4:19387051-19387070 None:intergenic 35.0%
ACTTAATGGTTGTCACAATC+TGG + chr7_4:19387103-19387122 Msa1143620:intron 35.0%
GGGAAACATATCATTTCAGT+TGG + chr7_4:19387356-19387375 Msa1143620:CDS 35.0%
ACATATCATTTCAGTTGGAG+AGG + chr7_4:19387361-19387380 Msa1143620:CDS 35.0%
! TTGTGAGTACTTTTCCTTCA+AGG + chr7_4:19387457-19387476 Msa1143620:CDS 35.0%
! TGTGAGTACTTTTCCTTCAA+GGG + chr7_4:19387458-19387477 Msa1143620:CDS 35.0%
! GATACAGAACGATTTTCTCT+TGG + chr7_4:19387599-19387618 Msa1143620:CDS 35.0%
! GGTAATTGGTTCTTCATTGA+TGG + chr7_4:19387620-19387639 Msa1143620:CDS 35.0%
TCACATTCATCTTCTACAAG+AGG - chr7_4:19387707-19387726 None:intergenic 35.0%
!! TTGCTTAGAATTTTGGAAGG+TGG + chr7_4:19387963-19387982 Msa1143620:three_prime_UTR 35.0%
TCAAGTTCTTGACAAATTCC+AGG + chr7_4:19388050-19388069 Msa1143620:three_prime_UTR 35.0%
! TGCACTTTTCATTATGTACC+TGG - chr7_4:19388189-19388208 None:intergenic 35.0%
TCTTTACTCTATGGTCTGTT+AGG - chr7_4:19384205-19384224 None:intergenic 35.0%
AGCGATAACTCTTTACTCTA+TGG - chr7_4:19384214-19384233 None:intergenic 35.0%
GCATATTCATTCATGGCTTA+AGG - chr7_4:19384245-19384264 None:intergenic 35.0%
GAGCTATGCATATTCATTCA+TGG - chr7_4:19384252-19384271 None:intergenic 35.0%
!!! GTTTTGATGAGAAGCATTGA+TGG - chr7_4:19384309-19384328 None:intergenic 35.0%
TTGTAGGAATAGAAAAGGCA+AGG - chr7_4:19384402-19384421 None:intergenic 35.0%
! GCTTGGTAACCAAAAAGAAA+CGG - chr7_4:19384606-19384625 None:intergenic 35.0%
AATCTATAGTCTATTGGGGT+TGG + chr7_4:19384833-19384852 Msa1143620:intron 35.0%
!! TGAAAAGTAGTGGATTGAAG+TGG + chr7_4:19385054-19385073 Msa1143620:five_prime_UTR 35.0%
! GACTCATTGGATATTTTGTC+TGG + chr7_4:19385175-19385194 Msa1143620:CDS 35.0%
!!! ATTCTGTTTTAGCCGAAGAA+GGG + chr7_4:19385203-19385222 Msa1143620:CDS 35.0%
CTTCTTTCCTTCACACTAAT+AGG - chr7_4:19385283-19385302 None:intergenic 35.0%
CTATTAGTGTGAAGGAAAGA+AGG + chr7_4:19385281-19385300 Msa1143620:CDS 35.0%
! ATTTAGCTTACACTTCTTCC+AGG + chr7_4:19385326-19385345 Msa1143620:CDS 35.0%
! TTTAGCTTACACTTCTTCCA+GGG + chr7_4:19385327-19385346 Msa1143620:CDS 35.0%
!! AAACAACGAGTTTTGATGAC+TGG + chr7_4:19385365-19385384 Msa1143620:CDS 35.0%
TGTTGGAAGATCTTAAAAGG+CGG + chr7_4:19385521-19385540 Msa1143620:CDS 35.0%
! GTGAGGCAAAAGAAGAATTT+TGG + chr7_4:19385593-19385612 Msa1143620:CDS 35.0%
GAATAAAACTCGTAGAGTGA+AGG + chr7_4:19385720-19385739 Msa1143620:CDS 35.0%
CAAGAAATTAGAGCTCACAA+AGG + chr7_4:19385793-19385812 Msa1143620:CDS 35.0%
ACTATGAAATTCAGTCCCAA+TGG + chr7_4:19385826-19385845 Msa1143620:CDS 35.0%
TCATTTGGAAGGGAAACAAA+GGG - chr7_4:19385928-19385947 None:intergenic 35.0%
ATCATTTGGAAGGGAAACAA+AGG - chr7_4:19385929-19385948 None:intergenic 35.0%
TGACCAAACAATTCTTGAAG+TGG - chr7_4:19385973-19385992 None:intergenic 35.0%
TTCCAGTGATATCTTGGATT+TGG + chr7_4:19385993-19386012 Msa1143620:CDS 35.0%
ATGTTCAATGTCTAAGAGCA+TGG - chr7_4:19386326-19386345 None:intergenic 35.0%
ATTGTGCCCTCTTCTATAAT+TGG + chr7_4:19386353-19386372 Msa1143620:intron 35.0%
TTTATCAGTGGATCCATTGA+TGG + chr7_4:19386420-19386439 Msa1143620:CDS 35.0%
GATGGTAAAGTTCGAATATG+GGG + chr7_4:19386438-19386457 Msa1143620:CDS 35.0%
! TGAAGAACGAGTTATTGACT+GGG + chr7_4:19386467-19386486 Msa1143620:CDS 35.0%
! TTATTGACTGGGCAGATATA+CGG + chr7_4:19386478-19386497 Msa1143620:CDS 35.0%
! TTTGTAGTTGGTTCTCTTAC+AGG + chr7_4:19386662-19386681 Msa1143620:CDS 35.0%
AGGAAAATATTTCCAGCTTG+AGG + chr7_4:19386803-19386822 Msa1143620:intron 35.0%
CTAATGCTTTCTTCTTTCCA+TGG - chr7_4:19386842-19386861 None:intergenic 35.0%
!! CATGGAAAGAAGAAAGCATT+AGG + chr7_4:19386840-19386859 Msa1143620:CDS 35.0%
! TCGATCCAATATGCAGATTT+TGG - chr7_4:19387051-19387070 None:intergenic 35.0%
ACTTAATGGTTGTCACAATC+TGG + chr7_4:19387103-19387122 Msa1143620:intron 35.0%
GGGAAACATATCATTTCAGT+TGG + chr7_4:19387356-19387375 Msa1143620:CDS 35.0%
ACATATCATTTCAGTTGGAG+AGG + chr7_4:19387361-19387380 Msa1143620:CDS 35.0%
! TTGTGAGTACTTTTCCTTCA+AGG + chr7_4:19387457-19387476 Msa1143620:CDS 35.0%
! TGTGAGTACTTTTCCTTCAA+GGG + chr7_4:19387458-19387477 Msa1143620:CDS 35.0%
! GATACAGAACGATTTTCTCT+TGG + chr7_4:19387599-19387618 Msa1143620:CDS 35.0%
! GGTAATTGGTTCTTCATTGA+TGG + chr7_4:19387620-19387639 Msa1143620:CDS 35.0%
TCACATTCATCTTCTACAAG+AGG - chr7_4:19387707-19387726 None:intergenic 35.0%
!! TTGCTTAGAATTTTGGAAGG+TGG + chr7_4:19387963-19387982 Msa1143620:three_prime_UTR 35.0%
TCAAGTTCTTGACAAATTCC+AGG + chr7_4:19388050-19388069 Msa1143620:three_prime_UTR 35.0%
! TGCACTTTTCATTATGTACC+TGG - chr7_4:19388189-19388208 None:intergenic 35.0%
TTACTCTATGGTCTGTTAGG+TGG - chr7_4:19384202-19384221 None:intergenic 40.0%
!! TGAGAAGCATTGATGGCTAA+TGG - chr7_4:19384302-19384321 None:intergenic 40.0%
!!! GCTAGTTAGTGCTGTTTTGT+AGG - chr7_4:19384418-19384437 None:intergenic 40.0%
!! ACGGTTTCCTTTTTCTAGAG+AGG - chr7_4:19384587-19384606 None:intergenic 40.0%
TGTTTACCTCTGCATATGCT+TGG - chr7_4:19384623-19384642 None:intergenic 40.0%
TTGACAGTGACATGTATTCC+TGG + chr7_4:19384717-19384736 Msa1143620:intron 40.0%
GGAGACTATACTACTATTCC+AGG - chr7_4:19384738-19384757 None:intergenic 40.0%
!! TTCAAGGCGTTGAAAAGTAG+TGG + chr7_4:19385044-19385063 Msa1143620:five_prime_UTR 40.0%
!! AGTGGATTGAAGTGGTAAAG+TGG + chr7_4:19385062-19385081 Msa1143620:five_prime_UTR 40.0%
! GTGGATTGAAGTGGTAAAGT+GGG + chr7_4:19385063-19385082 Msa1143620:five_prime_UTR 40.0%
! GGTAAAGTGGGATTTTCATG+TGG + chr7_4:19385075-19385094 Msa1143620:five_prime_UTR 40.0%
! AAGTGGGATTTTCATGTGGA+AGG + chr7_4:19385079-19385098 Msa1143620:five_prime_UTR 40.0%
! AGCTGTGATGATGATGATGA+TGG + chr7_4:19385133-19385152 Msa1143620:CDS 40.0%
!!! GATTCTGTTTTAGCCGAAGA+AGG + chr7_4:19385202-19385221 Msa1143620:CDS 40.0%
TTCAGAACCAAACCCTTCTT+CGG - chr7_4:19385218-19385237 None:intergenic 40.0%
!! AAGAAGGGTTTGGTTCTGAA+AGG + chr7_4:19385218-19385237 Msa1143620:CDS 40.0%
GAATGAGCCTATTAGTGTGA+AGG + chr7_4:19385273-19385292 Msa1143620:CDS 40.0%
TTTCTCTTGTGAACAAACCC+TGG - chr7_4:19385347-19385366 None:intergenic 40.0%
!! AACGAGTTTTGATGACTGGT+CGG + chr7_4:19385369-19385388 Msa1143620:CDS 40.0%
AATGCAAGCATTTCACCTTC+TGG + chr7_4:19385439-19385458 Msa1143620:CDS 40.0%
! TCACCTTCTGGTAAAGTATC+TGG + chr7_4:19385451-19385470 Msa1143620:CDS 40.0%
! CACCTTCTGGTAAAGTATCT+GGG + chr7_4:19385452-19385471 Msa1143620:CDS 40.0%
TTCCCAGATACTTTACCAGA+AGG - chr7_4:19385457-19385476 None:intergenic 40.0%
! TGGTAAAGTATCTGGGAAGT+TGG + chr7_4:19385459-19385478 Msa1143620:CDS 40.0%
!! TTCTGAAGCTGAAGTCTTGT+TGG + chr7_4:19385504-19385523 Msa1143620:CDS 40.0%
!! TGAAGCGTTTTGTGAACATC+AGG + chr7_4:19385653-19385672 Msa1143620:CDS 40.0%
! CGTTTTGTGAACATCAGGAA+AGG + chr7_4:19385658-19385677 Msa1143620:CDS 40.0%
GCAGAATAAAAAGAGGTGGA+TGG + chr7_4:19385747-19385766 Msa1143620:CDS 40.0%
GAGTTCAGTGAGGTATACAT+TGG + chr7_4:19385769-19385788 Msa1143620:CDS 40.0%
GAGCTCACAAAGGACTAATA+TGG + chr7_4:19385803-19385822 Msa1143620:CDS 40.0%
CTAGCCAAATACTGACCATT+GGG - chr7_4:19385844-19385863 None:intergenic 40.0%
ACTAGCCAAATACTGACCAT+TGG - chr7_4:19385845-19385864 None:intergenic 40.0%
AATGGTCAGTATTTGGCTAG+TGG + chr7_4:19385844-19385863 Msa1143620:CDS 40.0%
TCGCCACTTCAAGAATTGTT+TGG + chr7_4:19385967-19385986 Msa1143620:CDS 40.0%
TGGTCATTCCAGTGATATCT+TGG + chr7_4:19385987-19386006 Msa1143620:CDS 40.0%
ACTCACATCTGAATTAGACC+AGG - chr7_4:19386019-19386038 None:intergenic 40.0%
GATTCTTCTTTCGTCTTCGA+TGG + chr7_4:19386134-19386153 Msa1143620:intron 40.0%
! CTAAGTGTTTTCCCTCACAA+AGG + chr7_4:19386198-19386217 Msa1143620:CDS 40.0%
ACTTACCAAAGCCTTTGTGA+GGG - chr7_4:19386212-19386231 None:intergenic 40.0%
TACTTACCAAAGCCTTTGTG+AGG - chr7_4:19386213-19386232 None:intergenic 40.0%
GTGAAGAACGAGTTATTGAC+TGG + chr7_4:19386466-19386485 Msa1143620:CDS 40.0%
! TATTGACTGGGCAGATATAC+GGG + chr7_4:19386479-19386498 Msa1143620:CDS 40.0%
!!! TGCCGTTTTTATGTTGCTTC+AGG + chr7_4:19386689-19386708 Msa1143620:CDS 40.0%
TTGCTTCAGGTATGTACATG+TGG + chr7_4:19386702-19386721 Msa1143620:intron 40.0%
CTCATGAATGTAGCAGCAAT+TGG - chr7_4:19386732-19386751 None:intergenic 40.0%
GCATTAGGCAACAAGATTAC+TGG + chr7_4:19386855-19386874 Msa1143620:CDS 40.0%
CAACAAGATTACTGGCATTC+AGG + chr7_4:19386863-19386882 Msa1143620:CDS 40.0%
TGGAAGAACTGCAAACAACA+TGG - chr7_4:19386990-19387009 None:intergenic 40.0%
! GTCAGTTTTCTCGTTCTATC+AGG + chr7_4:19387287-19387306 Msa1143620:intron 40.0%
TCCGGTTCATTTACATCAAG+TGG + chr7_4:19387335-19387354 Msa1143620:CDS 40.0%
CCCACTTGATGTAAATGAAC+CGG - chr7_4:19387339-19387358 None:intergenic 40.0%
CCGGTTCATTTACATCAAGT+GGG + chr7_4:19387336-19387355 Msa1143620:CDS 40.0%
! TTCATTGATGGTACATGTCG+AGG + chr7_4:19387632-19387651 Msa1143620:CDS 40.0%
GAGGTTCTACTTCTATGACA+TGG + chr7_4:19387651-19387670 Msa1143620:CDS 40.0%
TGAGGAGAAACTTCCAACAT+GGG + chr7_4:19387676-19387695 Msa1143620:CDS 40.0%
ACAAGAGGTAAATCCCATGT+TGG - chr7_4:19387692-19387711 None:intergenic 40.0%
TGTCACGAAGATAGTAGCTA+TGG + chr7_4:19387740-19387759 Msa1143620:CDS 40.0%
ACGAAGATAGTAGCTATGGA+AGG + chr7_4:19387744-19387763 Msa1143620:CDS 40.0%
TAACAGGCAAGCCAAAATTG+TGG - chr7_4:19387835-19387854 None:intergenic 40.0%
!!! ACAATTTTGGCTTGCCTGTT+AGG + chr7_4:19387834-19387853 Msa1143620:CDS 40.0%
!!! GAAAAGTTTTGGCTCGGTAA+AGG + chr7_4:19387897-19387916 Msa1143620:three_prime_UTR 40.0%
! AGGTGTAAATTTTCACGTGG+TGG + chr7_4:19387917-19387936 Msa1143620:three_prime_UTR 40.0%
TGGTTATATCATCTGCGTAC+AGG + chr7_4:19387998-19388017 Msa1143620:three_prime_UTR 40.0%
CAAGAACTTGACATCCATCA+TGG - chr7_4:19388041-19388060 None:intergenic 40.0%
GCCTTCAATGTCGTGAATTT+AGG + chr7_4:19388098-19388117 Msa1143620:three_prime_UTR 40.0%
GCCTAAATTCACGACATTGA+AGG - chr7_4:19388102-19388121 None:intergenic 40.0%
TTACTCTATGGTCTGTTAGG+TGG - chr7_4:19384202-19384221 None:intergenic 40.0%
!! TGAGAAGCATTGATGGCTAA+TGG - chr7_4:19384302-19384321 None:intergenic 40.0%
!!! GCTAGTTAGTGCTGTTTTGT+AGG - chr7_4:19384418-19384437 None:intergenic 40.0%
!! ACGGTTTCCTTTTTCTAGAG+AGG - chr7_4:19384587-19384606 None:intergenic 40.0%
TGTTTACCTCTGCATATGCT+TGG - chr7_4:19384623-19384642 None:intergenic 40.0%
TTGACAGTGACATGTATTCC+TGG + chr7_4:19384717-19384736 Msa1143620:intron 40.0%
GGAGACTATACTACTATTCC+AGG - chr7_4:19384738-19384757 None:intergenic 40.0%
!! TTCAAGGCGTTGAAAAGTAG+TGG + chr7_4:19385044-19385063 Msa1143620:five_prime_UTR 40.0%
!! AGTGGATTGAAGTGGTAAAG+TGG + chr7_4:19385062-19385081 Msa1143620:five_prime_UTR 40.0%
! GTGGATTGAAGTGGTAAAGT+GGG + chr7_4:19385063-19385082 Msa1143620:five_prime_UTR 40.0%
! GGTAAAGTGGGATTTTCATG+TGG + chr7_4:19385075-19385094 Msa1143620:five_prime_UTR 40.0%
! AAGTGGGATTTTCATGTGGA+AGG + chr7_4:19385079-19385098 Msa1143620:five_prime_UTR 40.0%
! AGCTGTGATGATGATGATGA+TGG + chr7_4:19385133-19385152 Msa1143620:CDS 40.0%
!!! GATTCTGTTTTAGCCGAAGA+AGG + chr7_4:19385202-19385221 Msa1143620:CDS 40.0%
TTCAGAACCAAACCCTTCTT+CGG - chr7_4:19385218-19385237 None:intergenic 40.0%
!! AAGAAGGGTTTGGTTCTGAA+AGG + chr7_4:19385218-19385237 Msa1143620:CDS 40.0%
GAATGAGCCTATTAGTGTGA+AGG + chr7_4:19385273-19385292 Msa1143620:CDS 40.0%
TTTCTCTTGTGAACAAACCC+TGG - chr7_4:19385347-19385366 None:intergenic 40.0%
!! AACGAGTTTTGATGACTGGT+CGG + chr7_4:19385369-19385388 Msa1143620:CDS 40.0%
AATGCAAGCATTTCACCTTC+TGG + chr7_4:19385439-19385458 Msa1143620:CDS 40.0%
! TCACCTTCTGGTAAAGTATC+TGG + chr7_4:19385451-19385470 Msa1143620:CDS 40.0%
! CACCTTCTGGTAAAGTATCT+GGG + chr7_4:19385452-19385471 Msa1143620:CDS 40.0%
TTCCCAGATACTTTACCAGA+AGG - chr7_4:19385457-19385476 None:intergenic 40.0%
! TGGTAAAGTATCTGGGAAGT+TGG + chr7_4:19385459-19385478 Msa1143620:CDS 40.0%
!! TTCTGAAGCTGAAGTCTTGT+TGG + chr7_4:19385504-19385523 Msa1143620:CDS 40.0%
!! TGAAGCGTTTTGTGAACATC+AGG + chr7_4:19385653-19385672 Msa1143620:CDS 40.0%
! CGTTTTGTGAACATCAGGAA+AGG + chr7_4:19385658-19385677 Msa1143620:CDS 40.0%
GCAGAATAAAAAGAGGTGGA+TGG + chr7_4:19385747-19385766 Msa1143620:CDS 40.0%
GAGTTCAGTGAGGTATACAT+TGG + chr7_4:19385769-19385788 Msa1143620:CDS 40.0%
GAGCTCACAAAGGACTAATA+TGG + chr7_4:19385803-19385822 Msa1143620:CDS 40.0%
CTAGCCAAATACTGACCATT+GGG - chr7_4:19385844-19385863 None:intergenic 40.0%
ACTAGCCAAATACTGACCAT+TGG - chr7_4:19385845-19385864 None:intergenic 40.0%
AATGGTCAGTATTTGGCTAG+TGG + chr7_4:19385844-19385863 Msa1143620:CDS 40.0%
TCGCCACTTCAAGAATTGTT+TGG + chr7_4:19385967-19385986 Msa1143620:CDS 40.0%
TGGTCATTCCAGTGATATCT+TGG + chr7_4:19385987-19386006 Msa1143620:CDS 40.0%
ACTCACATCTGAATTAGACC+AGG - chr7_4:19386019-19386038 None:intergenic 40.0%
GATTCTTCTTTCGTCTTCGA+TGG + chr7_4:19386134-19386153 Msa1143620:intron 40.0%
! CTAAGTGTTTTCCCTCACAA+AGG + chr7_4:19386198-19386217 Msa1143620:CDS 40.0%
ACTTACCAAAGCCTTTGTGA+GGG - chr7_4:19386212-19386231 None:intergenic 40.0%
TACTTACCAAAGCCTTTGTG+AGG - chr7_4:19386213-19386232 None:intergenic 40.0%
GTGAAGAACGAGTTATTGAC+TGG + chr7_4:19386466-19386485 Msa1143620:CDS 40.0%
! TATTGACTGGGCAGATATAC+GGG + chr7_4:19386479-19386498 Msa1143620:CDS 40.0%
!!! TGCCGTTTTTATGTTGCTTC+AGG + chr7_4:19386689-19386708 Msa1143620:CDS 40.0%
TTGCTTCAGGTATGTACATG+TGG + chr7_4:19386702-19386721 Msa1143620:intron 40.0%
CTCATGAATGTAGCAGCAAT+TGG - chr7_4:19386732-19386751 None:intergenic 40.0%
GCATTAGGCAACAAGATTAC+TGG + chr7_4:19386855-19386874 Msa1143620:CDS 40.0%
CAACAAGATTACTGGCATTC+AGG + chr7_4:19386863-19386882 Msa1143620:CDS 40.0%
TGGAAGAACTGCAAACAACA+TGG - chr7_4:19386990-19387009 None:intergenic 40.0%
! GTCAGTTTTCTCGTTCTATC+AGG + chr7_4:19387287-19387306 Msa1143620:intron 40.0%
TCCGGTTCATTTACATCAAG+TGG + chr7_4:19387335-19387354 Msa1143620:CDS 40.0%
CCCACTTGATGTAAATGAAC+CGG - chr7_4:19387339-19387358 None:intergenic 40.0%
CCGGTTCATTTACATCAAGT+GGG + chr7_4:19387336-19387355 Msa1143620:CDS 40.0%
! TTCATTGATGGTACATGTCG+AGG + chr7_4:19387632-19387651 Msa1143620:CDS 40.0%
GAGGTTCTACTTCTATGACA+TGG + chr7_4:19387651-19387670 Msa1143620:CDS 40.0%
TGAGGAGAAACTTCCAACAT+GGG + chr7_4:19387676-19387695 Msa1143620:CDS 40.0%
ACAAGAGGTAAATCCCATGT+TGG - chr7_4:19387692-19387711 None:intergenic 40.0%
TGTCACGAAGATAGTAGCTA+TGG + chr7_4:19387740-19387759 Msa1143620:CDS 40.0%
ACGAAGATAGTAGCTATGGA+AGG + chr7_4:19387744-19387763 Msa1143620:CDS 40.0%
TAACAGGCAAGCCAAAATTG+TGG - chr7_4:19387835-19387854 None:intergenic 40.0%
!!! ACAATTTTGGCTTGCCTGTT+AGG + chr7_4:19387834-19387853 Msa1143620:CDS 40.0%
!!! GAAAAGTTTTGGCTCGGTAA+AGG + chr7_4:19387897-19387916 Msa1143620:three_prime_UTR 40.0%
! AGGTGTAAATTTTCACGTGG+TGG + chr7_4:19387917-19387936 Msa1143620:three_prime_UTR 40.0%
TGGTTATATCATCTGCGTAC+AGG + chr7_4:19387998-19388017 Msa1143620:three_prime_UTR 40.0%
CAAGAACTTGACATCCATCA+TGG - chr7_4:19388041-19388060 None:intergenic 40.0%
GCCTTCAATGTCGTGAATTT+AGG + chr7_4:19388098-19388117 Msa1143620:three_prime_UTR 40.0%
GCCTAAATTCACGACATTGA+AGG - chr7_4:19388102-19388121 None:intergenic 40.0%
ATGGTCTGTTAGGTGGTCAT+AGG - chr7_4:19384195-19384214 None:intergenic 45.0%
TGGTTACCAAGCATATGCAG+AGG + chr7_4:19384614-19384633 Msa1143620:five_prime_UTR 45.0%
CTATAGTCTATTGGGGTTGG+TGG + chr7_4:19384836-19384855 Msa1143620:intron 45.0%
!! GTTTTAGCCGAAGAAGGGTT+TGG + chr7_4:19385208-19385227 Msa1143620:CDS 45.0%
! AAGAAGGGAACGTTTTCTGC+AGG + chr7_4:19385297-19385316 Msa1143620:CDS 45.0%
! AGAAGGGAACGTTTTCTGCA+GGG + chr7_4:19385298-19385317 Msa1143620:CDS 45.0%
AACATCAGGAAAGGCGACAA+AGG + chr7_4:19385667-19385686 Msa1143620:CDS 45.0%
CAGTCCCAATGGTCAGTATT+TGG + chr7_4:19385837-19385856 Msa1143620:CDS 45.0%
TTTGGAAGGGAAACAAAGGG+AGG - chr7_4:19385925-19385944 None:intergenic 45.0%
GGCCAAATCCAAGATATCAC+TGG - chr7_4:19385998-19386017 None:intergenic 45.0%
GTGATATCTTGGATTTGGCC+TGG + chr7_4:19385998-19386017 Msa1143620:CDS 45.0%
TGGATAAAACTGTTCGCGCT+TGG + chr7_4:19386154-19386173 Msa1143620:CDS 45.0%
! GTTTTCCCTCACAAAGGCTT+TGG + chr7_4:19386204-19386223 Msa1143620:CDS 45.0%
CATGTGCAGGGATTTGTAGT+TGG + chr7_4:19386650-19386669 Msa1143620:intron 45.0%
TATTTATCTGCGCCTCAAGC+TGG - chr7_4:19386818-19386837 None:intergenic 45.0%
GAGGCGCAGATAAATATCCA+TGG + chr7_4:19386822-19386841 Msa1143620:CDS 45.0%
GCGTAACTGTTGCAATACCT+TGG + chr7_4:19387480-19387499 Msa1143620:CDS 45.0%
ACTGTTGCAATACCTTGGTG+TGG + chr7_4:19387485-19387504 Msa1143620:CDS 45.0%
! TCTGTTTTCATGCCACACCA+AGG - chr7_4:19387500-19387519 None:intergenic 45.0%
GGCATGAAAACAGATAGACG+TGG + chr7_4:19387506-19387525 Msa1143620:CDS 45.0%
GGAAGCAAAAACCAAGCTAG+AGG + chr7_4:19387559-19387578 Msa1143620:CDS 45.0%
CTCAGAAGTAACCTCTAGCT+TGG - chr7_4:19387573-19387592 None:intergenic 45.0%
CAAGCTAGAGGTTACTTCTG+AGG + chr7_4:19387571-19387590 Msa1143620:CDS 45.0%
TACTTCTATGACATGGCCTG+AGG + chr7_4:19387658-19387677 Msa1143620:CDS 45.0%
CATGTTGGAAGTTTCTCCTC+AGG - chr7_4:19387677-19387696 None:intergenic 45.0%
CTGAGGAGAAACTTCCAACA+TGG + chr7_4:19387675-19387694 Msa1143620:CDS 45.0%
GCATTGTCCTAAAGCCTAAC+AGG - chr7_4:19387851-19387870 None:intergenic 45.0%
! GAAGGTGGATTTGAAGCTTG+TGG + chr7_4:19387978-19387997 Msa1143620:three_prime_UTR 45.0%
ATGTCGTGAATTTAGGCCAC+AGG + chr7_4:19388105-19388124 Msa1143620:three_prime_UTR 45.0%
ATGGTCTGTTAGGTGGTCAT+AGG - chr7_4:19384195-19384214 None:intergenic 45.0%
TGGTTACCAAGCATATGCAG+AGG + chr7_4:19384614-19384633 Msa1143620:five_prime_UTR 45.0%
CTATAGTCTATTGGGGTTGG+TGG + chr7_4:19384836-19384855 Msa1143620:intron 45.0%
!! GTTTTAGCCGAAGAAGGGTT+TGG + chr7_4:19385208-19385227 Msa1143620:CDS 45.0%
! AAGAAGGGAACGTTTTCTGC+AGG + chr7_4:19385297-19385316 Msa1143620:CDS 45.0%
! AGAAGGGAACGTTTTCTGCA+GGG + chr7_4:19385298-19385317 Msa1143620:CDS 45.0%
AACATCAGGAAAGGCGACAA+AGG + chr7_4:19385667-19385686 Msa1143620:CDS 45.0%
CAGTCCCAATGGTCAGTATT+TGG + chr7_4:19385837-19385856 Msa1143620:CDS 45.0%
TTTGGAAGGGAAACAAAGGG+AGG - chr7_4:19385925-19385944 None:intergenic 45.0%
GGCCAAATCCAAGATATCAC+TGG - chr7_4:19385998-19386017 None:intergenic 45.0%
GTGATATCTTGGATTTGGCC+TGG + chr7_4:19385998-19386017 Msa1143620:CDS 45.0%
TGGATAAAACTGTTCGCGCT+TGG + chr7_4:19386154-19386173 Msa1143620:CDS 45.0%
! GTTTTCCCTCACAAAGGCTT+TGG + chr7_4:19386204-19386223 Msa1143620:CDS 45.0%
CATGTGCAGGGATTTGTAGT+TGG + chr7_4:19386650-19386669 Msa1143620:intron 45.0%
TATTTATCTGCGCCTCAAGC+TGG - chr7_4:19386818-19386837 None:intergenic 45.0%
GAGGCGCAGATAAATATCCA+TGG + chr7_4:19386822-19386841 Msa1143620:CDS 45.0%
GCGTAACTGTTGCAATACCT+TGG + chr7_4:19387480-19387499 Msa1143620:CDS 45.0%
ACTGTTGCAATACCTTGGTG+TGG + chr7_4:19387485-19387504 Msa1143620:CDS 45.0%
! TCTGTTTTCATGCCACACCA+AGG - chr7_4:19387500-19387519 None:intergenic 45.0%
GGCATGAAAACAGATAGACG+TGG + chr7_4:19387506-19387525 Msa1143620:CDS 45.0%
GGAAGCAAAAACCAAGCTAG+AGG + chr7_4:19387559-19387578 Msa1143620:CDS 45.0%
CTCAGAAGTAACCTCTAGCT+TGG - chr7_4:19387573-19387592 None:intergenic 45.0%
CAAGCTAGAGGTTACTTCTG+AGG + chr7_4:19387571-19387590 Msa1143620:CDS 45.0%
TACTTCTATGACATGGCCTG+AGG + chr7_4:19387658-19387677 Msa1143620:CDS 45.0%
CATGTTGGAAGTTTCTCCTC+AGG - chr7_4:19387677-19387696 None:intergenic 45.0%
CTGAGGAGAAACTTCCAACA+TGG + chr7_4:19387675-19387694 Msa1143620:CDS 45.0%
GCATTGTCCTAAAGCCTAAC+AGG - chr7_4:19387851-19387870 None:intergenic 45.0%
! GAAGGTGGATTTGAAGCTTG+TGG + chr7_4:19387978-19387997 Msa1143620:three_prime_UTR 45.0%
ATGTCGTGAATTTAGGCCAC+AGG + chr7_4:19388105-19388124 Msa1143620:three_prime_UTR 45.0%
!! GGGTTTGGTTCTGAAAGGAG+AGG + chr7_4:19385223-19385242 Msa1143620:CDS 50.0%
! GGAACGTTTTCTGCAGGGTA+TGG + chr7_4:19385303-19385322 Msa1143620:CDS 50.0%
! TGATGACTGGTCGGTCACAT+TGG + chr7_4:19385378-19385397 Msa1143620:CDS 50.0%
! GATGACTGGTCGGTCACATT+GGG + chr7_4:19385379-19385398 Msa1143620:CDS 50.0%
! ATGACTGGTCGGTCACATTG+GGG + chr7_4:19385380-19385399 Msa1143620:CDS 50.0%
! TCTGGGAAGTTGGTTCTCTC+TGG + chr7_4:19385469-19385488 Msa1143620:CDS 50.0%
! GGAAGTTGGTTCTCTCTGGA+TGG + chr7_4:19385473-19385492 Msa1143620:CDS 50.0%
! CAAGAGCACAGACAGAGAGA+AGG + chr7_4:19385571-19385590 Msa1143620:CDS 50.0%
GGTCAGTATTTGGCTAGTGG+AGG + chr7_4:19385847-19385866 Msa1143620:CDS 50.0%
TTGGCTAGTGGAGGTGAAGA+TGG + chr7_4:19385856-19385875 Msa1143620:CDS 50.0%
AAGATGGCGTTGTGCGCATA+TGG + chr7_4:19385872-19385891 Msa1143620:CDS 50.0%
GAAGGGAAACAAAGGGAGGA+CGG - chr7_4:19385921-19385940 None:intergenic 50.0%
TCGTTCTATCAGGCCTTCCA+TGG + chr7_4:19387297-19387316 Msa1143620:intron 50.0%
TCTGACTTCCTGACCATGGA+AGG - chr7_4:19387313-19387332 None:intergenic 50.0%
GACATCTGACTTCCTGACCA+TGG - chr7_4:19387317-19387336 None:intergenic 50.0%
TGGTCAGGAAGTCAGATGTC+CGG + chr7_4:19387317-19387336 Msa1143620:CDS 50.0%
AGGACTCGCGCGTGTATATT+TGG + chr7_4:19387381-19387400 Msa1143620:CDS 50.0%
TGCAACAGTTACGCCCTTGA+AGG - chr7_4:19387474-19387493 None:intergenic 50.0%
GGTCTAACGATAGTAGCAGC+TGG + chr7_4:19387785-19387804 Msa1143620:CDS 50.0%
ATAGTAGCAGCTGGCAGTGA+TGG + chr7_4:19387794-19387813 Msa1143620:CDS 50.0%
! TGGCTTGCCTGTTAGGCTTT+AGG + chr7_4:19387841-19387860 Msa1143620:CDS 50.0%
AGGATTCTTTGCATGGCCTG+TGG - chr7_4:19388124-19388143 None:intergenic 50.0%
!! GGGTTTGGTTCTGAAAGGAG+AGG + chr7_4:19385223-19385242 Msa1143620:CDS 50.0%
! GGAACGTTTTCTGCAGGGTA+TGG + chr7_4:19385303-19385322 Msa1143620:CDS 50.0%
! TGATGACTGGTCGGTCACAT+TGG + chr7_4:19385378-19385397 Msa1143620:CDS 50.0%
! GATGACTGGTCGGTCACATT+GGG + chr7_4:19385379-19385398 Msa1143620:CDS 50.0%
! ATGACTGGTCGGTCACATTG+GGG + chr7_4:19385380-19385399 Msa1143620:CDS 50.0%
! TCTGGGAAGTTGGTTCTCTC+TGG + chr7_4:19385469-19385488 Msa1143620:CDS 50.0%
! GGAAGTTGGTTCTCTCTGGA+TGG + chr7_4:19385473-19385492 Msa1143620:CDS 50.0%
! CAAGAGCACAGACAGAGAGA+AGG + chr7_4:19385571-19385590 Msa1143620:CDS 50.0%
GGTCAGTATTTGGCTAGTGG+AGG + chr7_4:19385847-19385866 Msa1143620:CDS 50.0%
TTGGCTAGTGGAGGTGAAGA+TGG + chr7_4:19385856-19385875 Msa1143620:CDS 50.0%
AAGATGGCGTTGTGCGCATA+TGG + chr7_4:19385872-19385891 Msa1143620:CDS 50.0%
GAAGGGAAACAAAGGGAGGA+CGG - chr7_4:19385921-19385940 None:intergenic 50.0%
TCGTTCTATCAGGCCTTCCA+TGG + chr7_4:19387297-19387316 Msa1143620:intron 50.0%
TCTGACTTCCTGACCATGGA+AGG - chr7_4:19387313-19387332 None:intergenic 50.0%
GACATCTGACTTCCTGACCA+TGG - chr7_4:19387317-19387336 None:intergenic 50.0%
TGGTCAGGAAGTCAGATGTC+CGG + chr7_4:19387317-19387336 Msa1143620:CDS 50.0%
AGGACTCGCGCGTGTATATT+TGG + chr7_4:19387381-19387400 Msa1143620:CDS 50.0%
TGCAACAGTTACGCCCTTGA+AGG - chr7_4:19387474-19387493 None:intergenic 50.0%
GGTCTAACGATAGTAGCAGC+TGG + chr7_4:19387785-19387804 Msa1143620:CDS 50.0%
ATAGTAGCAGCTGGCAGTGA+TGG + chr7_4:19387794-19387813 Msa1143620:CDS 50.0%
! TGGCTTGCCTGTTAGGCTTT+AGG + chr7_4:19387841-19387860 Msa1143620:CDS 50.0%
AGGATTCTTTGCATGGCCTG+TGG - chr7_4:19388124-19388143 None:intergenic 50.0%
AAGGCGGCGTGAGTATGAAG+TGG + chr7_4:19385537-19385556 Msa1143620:CDS 55.0%
GCACAGACAGAGAGAAGGTG+AGG + chr7_4:19385576-19385595 Msa1143620:CDS 55.0%
GAGGTGGATGGAGTTCAGTG+AGG + chr7_4:19385759-19385778 Msa1143620:CDS 55.0%
CTATCAGGCCTTCCATGGTC+AGG + chr7_4:19387302-19387321 Msa1143620:intron 55.0%
AAGGCGGCGTGAGTATGAAG+TGG + chr7_4:19385537-19385556 Msa1143620:CDS 55.0%
GCACAGACAGAGAGAAGGTG+AGG + chr7_4:19385576-19385595 Msa1143620:CDS 55.0%
GAGGTGGATGGAGTTCAGTG+AGG + chr7_4:19385759-19385778 Msa1143620:CDS 55.0%
CTATCAGGCCTTCCATGGTC+AGG + chr7_4:19387302-19387321 Msa1143620:intron 55.0%
CTGGTCGGTCACATTGGGGT+CGG + chr7_4:19385384-19385403 Msa1143620:CDS 60.0%
ATTGGGGTCGGAGAGGATCG+TGG + chr7_4:19385396-19385415 Msa1143620:CDS 60.0%
GAGAGGATCGTGGCAAGCAG+TGG + chr7_4:19385406-19385425 Msa1143620:CDS 60.0%
CTGGTCGGTCACATTGGGGT+CGG + chr7_4:19385384-19385403 Msa1143620:CDS 60.0%
ATTGGGGTCGGAGAGGATCG+TGG + chr7_4:19385396-19385415 Msa1143620:CDS 60.0%
GAGAGGATCGTGGCAAGCAG+TGG + chr7_4:19385406-19385425 Msa1143620:CDS 60.0%
CGGTCACATTGGGGTCGGAG+AGG + chr7_4:19385389-19385408 Msa1143620:CDS 65.0%
CGGTCACATTGGGGTCGGAG+AGG + chr7_4:19385389-19385408 Msa1143620:CDS 65.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 19384185 19388277 19384185 ID=Msa1143620;Name=Msa1143620
chr7_4 mRNA 19384185 19388277 19384185 ID=Msa1143620-mRNA-1;Parent=Msa1143620;Name=Msa1143620-mRNA-1;_AED=0.15;_eAED=0.15;_QI=389|1|1|1|0.75|0.66|9|415|644
chr7_4 exon 19384185 19384369 19384185 ID=Msa1143620-mRNA-1:exon:4300;Parent=Msa1143620-mRNA-1
chr7_4 exon 19384571 19384635 19384571 ID=Msa1143620-mRNA-1:exon:4301;Parent=Msa1143620-mRNA-1
chr7_4 exon 19384988 19386032 19384988 ID=Msa1143620-mRNA-1:exon:4302;Parent=Msa1143620-mRNA-1
chr7_4 exon 19386135 19386225 19386135 ID=Msa1143620-mRNA-1:exon:4303;Parent=Msa1143620-mRNA-1
chr7_4 exon 19386382 19386539 19386382 ID=Msa1143620-mRNA-1:exon:4304;Parent=Msa1143620-mRNA-1
chr7_4 exon 19386659 19386710 19386659 ID=Msa1143620-mRNA-1:exon:4305;Parent=Msa1143620-mRNA-1
chr7_4 exon 19386805 19386884 19386805 ID=Msa1143620-mRNA-1:exon:4306;Parent=Msa1143620-mRNA-1
chr7_4 exon 19387002 19387095 19387002 ID=Msa1143620-mRNA-1:exon:4307;Parent=Msa1143620-mRNA-1
chr7_4 exon 19387309 19388277 19387309 ID=Msa1143620-mRNA-1:exon:4308;Parent=Msa1143620-mRNA-1
chr7_4 five_prime_UTR 19384185 19384369 19384185 ID=Msa1143620-mRNA-1:five_prime_utr;Parent=Msa1143620-mRNA-1
chr7_4 five_prime_UTR 19384571 19384635 19384571 ID=Msa1143620-mRNA-1:five_prime_utr;Parent=Msa1143620-mRNA-1
chr7_4 five_prime_UTR 19384988 19385126 19384988 ID=Msa1143620-mRNA-1:five_prime_utr;Parent=Msa1143620-mRNA-1
chr7_4 CDS 19385127 19386032 19385127 ID=Msa1143620-mRNA-1:cds;Parent=Msa1143620-mRNA-1
chr7_4 CDS 19386135 19386225 19386135 ID=Msa1143620-mRNA-1:cds;Parent=Msa1143620-mRNA-1
chr7_4 CDS 19386382 19386539 19386382 ID=Msa1143620-mRNA-1:cds;Parent=Msa1143620-mRNA-1
chr7_4 CDS 19386659 19386710 19386659 ID=Msa1143620-mRNA-1:cds;Parent=Msa1143620-mRNA-1
chr7_4 CDS 19386805 19386884 19386805 ID=Msa1143620-mRNA-1:cds;Parent=Msa1143620-mRNA-1
chr7_4 CDS 19387002 19387095 19387002 ID=Msa1143620-mRNA-1:cds;Parent=Msa1143620-mRNA-1
chr7_4 CDS 19387309 19387862 19387309 ID=Msa1143620-mRNA-1:cds;Parent=Msa1143620-mRNA-1
chr7_4 three_prime_UTR 19387863 19388277 19387863 ID=Msa1143620-mRNA-1:three_prime_utr;Parent=Msa1143620-mRNA-1
Gene Sequence

>Msa1143620

ATGCTGAGCTGTGATGATGATGATGATGGAGATATTGATCTATTCTATGACTCATTGGATATTTTGTCTGGTGAAGATTCTGTTTTAGCCGAAGAAGGGTTTGGTTCTGAAAGGAGAGGTTGTTTTGTTTATGATGAAATTTGGGTGAATGAGCCTATTAGTGTGAAGGAAAGAAGGGAACGTTTTCTGCAGGGTATGGATTTAGCTTACACTTCTTCCAGGGTTTGTTCACAAGAGAAAACAACGAGTTTTGATGACTGGTCGGTCACATTGGGGTCGGAGAGGATCGTGGCAAGCAGTGGAGCAGTCTCAAATGCAAGCATTTCACCTTCTGGTAAAGTATCTGGGAAGTTGGTTCTCTCTGGATGGAATGCAGCTTCTGAAGCTGAAGTCTTGTTGGAAGATCTTAAAAGGCGGCGTGAGTATGAAGTGGACGCTAGTTTTCAAGAGCACAGACAGAGAGAAGGTGAGGCAAAAGAAGAATTTTGGGATTTCGATAATGGTAAAGCTAATAGGAAAAACTGGTTGAAGCGTTTTGTGAACATCAGGAAAGGCGACAAAGGAAATTTTAGATCAAAACTGAATGCAGCAACGAATAAAACTCGTAGAGTGAAGGTAAAGCAGAATAAAAAGAGGTGGATGGAGTTCAGTGAGGTATACATTGGACAAGAAATTAGAGCTCACAAAGGACTAATATGGACTATGAAATTCAGTCCCAATGGTCAGTATTTGGCTAGTGGAGGTGAAGATGGCGTTGTGCGCATATGGCGCGTTTTGTCACGTGACAAAAGCCGTCCTCCCTTTGTTTCCCTTCCAAATGATATTTTTCAAATTGAGGAATCGCCACTTCAAGAATTGTTTGGTCATTCCAGTGATATCTTGGATTTGGCCTGGTCTAATTCAGATATTCTTCTTTCGTCTTCGATGGATAAAACTGTTCGCGCTTGGAAAATCAGTTGTGATCAATGTCTAAGTGTTTTCCCTCACAAAGGCTTTGTGACATGCATTCAATTCAACCCTGTCAATGAAAATTACTTTATCAGTGGATCCATTGATGGTAAAGTTCGAATATGGGGAATACGTGAAGAACGAGTTATTGACTGGGCAGATATACGGGATGTCATAAGTGCTATAAGTTATCAACAAGATGGAAAAGGATTTGTAGTTGGTTCTCTTACAGGCACATGCCGTTTTTATGTTGCTTCAGGAAAATATTTCCAGCTTGAGGCGCAGATAAATATCCATGGAAAGAAGAAAGCATTAGGCAACAAGATTACTGGCATTCAGTTCTTCCAAAACAACTGTCAGAGAATTATGATCACATCTGAAGATTCCAAAATCTGCATATTGGATCGAACTGAGATTGTTCAGAAATACAAAGGCCTTCCATGGTCAGGAAGTCAGATGTCCGGTTCATTTACATCAAGTGGGAAACATATCATTTCAGTTGGAGAGGACTCGCGCGTGTATATTTGGAACTTCAATGACTTCAAAAGTGGTTCTTCGAAAAAAATGAAATCGGACTATTCTTGTGAGTACTTTTCCTTCAAGGGCGTAACTGTTGCAATACCTTGGTGTGGCATGAAAACAGATAGACGTGGCTGTAGAATTAACTTTTCTCACTATTCTCTGGAAGCAAAAACCAAGCTAGAGGTTACTTCTGAGGTTAGAGATACAGAACGATTTTCTCTTGGTAATTGGTTCTTCATTGATGGTACATGTCGAGGTTCTACTTCTATGACATGGCCTGAGGAGAAACTTCCAACATGGGATTTACCTCTTGTAGAAGATGAATGTGATCATCAAAATTTATGTCACGAAGATAGTAGCTATGGAAGGAATATATCAGAAACATGGGGTCTAACGATAGTAGCAGCTGGCAGTGATGGAACTATCAAGACATTCCACAATTTTGGCTTGCCTGTTAGGCTTTAG
Protein sequence

>Msa1143620

MLSCDDDDDGDIDLFYDSLDILSGEDSVLAEEGFGSERRGCFVYDEIWVNEPISVKERRERFLQGMDLAYTSSRVCSQEKTTSFDDWSVTLGSERIVASSGAVSNASISPSGKVSGKLVLSGWNAASEAEVLLEDLKRRREYEVDASFQEHRQREGEAKEEFWDFDNGKANRKNWLKRFVNIRKGDKGNFRSKLNAATNKTRRVKVKQNKKRWMEFSEVYIGQEIRAHKGLIWTMKFSPNGQYLASGGEDGVVRIWRVLSRDKSRPPFVSLPNDIFQIEESPLQELFGHSSDILDLAWSNSDILLSSSMDKTVRAWKISCDQCLSVFPHKGFVTCIQFNPVNENYFISGSIDGKVRIWGIREERVIDWADIRDVISAISYQQDGKGFVVGSLTGTCRFYVASGKYFQLEAQINIHGKKKALGNKITGIQFFQNNCQRIMITSEDSKICILDRTEIVQKYKGLPWSGSQMSGSFTSSGKHIISVGEDSRVYIWNFNDFKSGSSKKMKSDYSCEYFSFKGVTVAIPWCGMKTDRRGCRINFSHYSLEAKTKLEVTSEVRDTERFSLGNWFFIDGTCRGSTSMTWPEEKLPTWDLPLVEDECDHQNLCHEDSSYGRNISETWGLTIVAAGSDGTIKTFHNFGLPVRL*