Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0029540 | sp|Q8S925|ATG8H_ARATH | 69.027 | 113 | 35 | 0 | 6 | 118 | 7 | 119 | 8.45e-56 | 172 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000490 | Msa0029540 | 0.841176 | 5.568482e-58 | -8.615850e-47 |
| Msa0000550 | Msa0029540 | 0.852654 | 4.006964e-61 | -8.615850e-47 |
| Msa0001950 | Msa0029540 | -0.824720 | 6.926659e-54 | -8.615850e-47 |
| Msa0008830 | Msa0029540 | -0.800797 | 1.217793e-48 | -8.615850e-47 |
| Msa0011850 | Msa0029540 | -0.830695 | 2.540647e-55 | -8.615850e-47 |
| Msa0016670 | Msa0029540 | -0.804882 | 1.744927e-49 | -8.615850e-47 |
| Msa0024680 | Msa0029540 | -0.864422 | 1.230180e-64 | -8.615850e-47 |
| Msa0027540 | Msa0029540 | -0.835346 | 1.770108e-56 | -8.615850e-47 |
| Msa0028060 | Msa0029540 | -0.821524 | 3.857860e-53 | -8.615850e-47 |
| Msa0029540 | Msa0030310 | -0.827321 | 1.668834e-54 | -8.615850e-47 |
| Msa0029540 | Msa0032370 | -0.840105 | 1.062579e-57 | -8.615850e-47 |
| Msa0029540 | Msa0032840 | 0.814745 | 1.317329e-51 | -8.615850e-47 |
| Msa0029540 | Msa0038350 | 0.827039 | 1.949754e-54 | -8.615850e-47 |
| Msa0029540 | Msa0041620 | -0.814401 | 1.569652e-51 | -8.615850e-47 |
| Msa0029540 | Msa0044710 | -0.808768 | 2.632757e-50 | -8.615850e-47 |
| Msa0029540 | Msa0048020 | -0.814498 | 1.494261e-51 | -8.615850e-47 |
| Msa0029540 | Msa0050430 | -0.811200 | 7.884071e-51 | -8.615850e-47 |
| Msa0029540 | Msa0050730 | -0.803016 | 4.263309e-49 | -8.615850e-47 |
| Msa0029540 | Msa0050760 | -0.801149 | 1.031607e-48 | -8.615850e-47 |
| Msa0029540 | Msa0051430 | 0.809303 | 2.022551e-50 | -8.615850e-47 |
| Msa0029540 | Msa0062220 | -0.818579 | 1.821043e-52 | -8.615850e-47 |
| Msa0029540 | Msa0067360 | -0.819187 | 1.324575e-52 | -8.615850e-47 |
| Msa0029540 | Msa0069260 | -0.839849 | 1.239019e-57 | -8.615850e-47 |
| Msa0029540 | Msa0069280 | -0.833718 | 4.540967e-56 | -8.615850e-47 |
| Msa0029540 | Msa0069310 | -0.836972 | 6.839930e-57 | -8.615850e-47 |
| Msa0029540 | Msa0075310 | -0.838546 | 2.696255e-57 | -8.615850e-47 |
| Msa0029540 | Msa0079250 | -0.815038 | 1.134514e-51 | -8.615850e-47 |
| Msa0029540 | Msa0091770 | -0.805952 | 1.041059e-49 | -8.615850e-47 |
| Msa0029540 | Msa0094100 | -0.802797 | 4.730076e-49 | -8.615850e-47 |
| Msa0029540 | Msa0095380 | -0.808429 | 3.111158e-50 | -8.615850e-47 |
| Msa0029540 | Msa0096670 | -0.841373 | 4.941710e-58 | -8.615850e-47 |
| Msa0029540 | Msa0101810 | 0.819949 | 8.875969e-53 | -8.615850e-47 |
| Msa0029540 | Msa0102750 | -0.841972 | 3.435017e-58 | -8.615850e-47 |
| Msa0029540 | Msa0105420 | -0.877132 | 8.031344e-69 | -8.615850e-47 |
| Msa0029540 | Msa0114540 | 0.826641 | 2.426945e-54 | -8.615850e-47 |
| Msa0029540 | Msa0120330 | -0.875596 | 2.720918e-68 | -8.615850e-47 |
| Msa0029540 | Msa0124340 | -0.812872 | 3.406997e-51 | -8.615850e-47 |
| Msa0029540 | Msa0138970 | 0.984782 | 1.426774e-161 | -8.615850e-47 |
| Msa0029540 | Msa0141430 | -0.812236 | 4.691822e-51 | -8.615850e-47 |
| Msa0029540 | Msa0141830 | -0.815809 | 7.640976e-52 | -8.615850e-47 |
| Msa0029540 | Msa0142470 | -0.817227 | 3.678300e-52 | -8.615850e-47 |
| Msa0029540 | Msa0143080 | -0.840963 | 6.334910e-58 | -8.615850e-47 |
| Msa0029540 | Msa0143240 | 0.823205 | 1.570052e-53 | -8.615850e-47 |
| Msa0029540 | Msa0145950 | -0.824457 | 7.989354e-54 | -8.615850e-47 |
| Msa0029540 | Msa0145980 | 0.802161 | 6.398199e-49 | -8.615850e-47 |
| Msa0029540 | Msa0156650 | 0.866753 | 2.263703e-65 | -8.615850e-47 |
| Msa0029540 | Msa0162770 | 0.808783 | 2.613830e-50 | -8.615850e-47 |
| Msa0029540 | Msa0168100 | -0.853655 | 2.070234e-61 | -8.615850e-47 |
| Msa0029540 | Msa0168640 | 0.834206 | 3.426407e-56 | -8.615850e-47 |
| Msa0029540 | Msa0169140 | 0.802754 | 4.828510e-49 | -8.615850e-47 |
| Msa0029540 | Msa0172350 | -0.901912 | 1.656681e-78 | -8.615850e-47 |
| Msa0029540 | Msa0185270 | -0.813226 | 2.849379e-51 | -8.615850e-47 |
| Msa0029540 | Msa0189950 | -0.830654 | 2.600312e-55 | -8.615850e-47 |
| Msa0029540 | Msa0191250 | -0.801473 | 8.855182e-49 | -8.615850e-47 |
| Msa0029540 | Msa0193650 | -0.827425 | 1.576024e-54 | -8.615850e-47 |
| Msa0029540 | Msa0194970 | -0.828273 | 9.852749e-55 | -8.615850e-47 |
| Msa0029540 | Msa0196020 | 0.835758 | 1.392571e-56 | -8.615850e-47 |
| Msa0029540 | Msa0196130 | 0.826791 | 2.235028e-54 | -8.615850e-47 |
| Msa0029540 | Msa0200950 | 0.854701 | 1.032620e-61 | -8.615850e-47 |
| Msa0029540 | Msa0207000 | -0.824453 | 8.005726e-54 | -8.615850e-47 |
| Msa0029540 | Msa0215320 | 0.827045 | 1.943003e-54 | -8.615850e-47 |
| Msa0029540 | Msa0217400 | -0.802829 | 4.660241e-49 | -8.615850e-47 |
| Msa0029540 | Msa0219070 | -0.800841 | 1.192702e-48 | -8.615850e-47 |
| Msa0029540 | Msa0222920 | -0.875098 | 4.025323e-68 | -8.615850e-47 |
| Msa0029540 | Msa0223290 | -0.801175 | 1.019443e-48 | -8.615850e-47 |
| Msa0029540 | Msa0224730 | -0.809177 | 2.152356e-50 | -8.615850e-47 |
| Msa0029540 | Msa0227400 | -0.810387 | 1.181971e-50 | -8.615850e-47 |
| Msa0029540 | Msa0227510 | -0.809769 | 1.606251e-50 | -8.615850e-47 |
| Msa0029540 | Msa0230550 | 0.810992 | 8.747514e-51 | -8.615850e-47 |
| Msa0029540 | Msa0236980 | -0.833929 | 4.020966e-56 | -8.615850e-47 |
| Msa0029540 | Msa0239660 | -0.815636 | 8.352708e-52 | -8.615850e-47 |
| Msa0029540 | Msa0252180 | -0.809841 | 1.550479e-50 | -8.615850e-47 |
| Msa0029540 | Msa0258670 | 0.853926 | 1.730177e-61 | -8.615850e-47 |
| Msa0029540 | Msa0259560 | -0.839919 | 1.187690e-57 | -8.615850e-47 |
| Msa0029540 | Msa0260820 | 0.891818 | 2.807012e-74 | -8.615850e-47 |
| Msa0029540 | Msa0264350 | -0.854242 | 1.402535e-61 | -8.615850e-47 |
| Msa0029540 | Msa0265820 | -0.806965 | 6.365227e-50 | -8.615850e-47 |
| Msa0029540 | Msa0267760 | -0.899775 | 1.418866e-77 | -8.615850e-47 |
| Msa0029540 | Msa0271960 | 0.801573 | 8.449962e-49 | -8.615850e-47 |
| Msa0029540 | Msa0272480 | 0.832820 | 7.601065e-56 | -8.615850e-47 |
| Msa0029540 | Msa0275030 | -0.833305 | 5.756562e-56 | -8.615850e-47 |
| Msa0029540 | Msa0275400 | 0.850320 | 1.832778e-60 | -8.615850e-47 |
| Msa0029540 | Msa0280900 | -0.815365 | 9.597366e-52 | -8.615850e-47 |
| Msa0029540 | Msa0282850 | -0.803406 | 3.539143e-49 | -8.615850e-47 |
| Msa0029540 | Msa0288240 | -0.826585 | 2.501956e-54 | -8.615850e-47 |
| Msa0029540 | Msa0288330 | -0.826066 | 3.325349e-54 | -8.615850e-47 |
| Msa0029540 | Msa0294560 | 0.819182 | 1.328128e-52 | -8.615850e-47 |
| Msa0029540 | Msa0296760 | -0.809677 | 1.680892e-50 | -8.615850e-47 |
| Msa0029540 | Msa0302450 | -0.859788 | 3.244715e-63 | -8.615850e-47 |
| Msa0029540 | Msa0307110 | -0.821999 | 2.994338e-53 | -8.615850e-47 |
| Msa0029540 | Msa0312690 | 0.817190 | 3.750134e-52 | -8.615850e-47 |
| Msa0029540 | Msa0312750 | 0.821257 | 4.446005e-53 | -8.615850e-47 |
| Msa0029540 | Msa0313990 | -0.836363 | 9.779559e-57 | -8.615850e-47 |
| Msa0029540 | Msa0315150 | -0.810082 | 1.375567e-50 | -8.615850e-47 |
| Msa0029540 | Msa0316850 | -0.829376 | 5.329938e-55 | -8.615850e-47 |
| Msa0029540 | Msa0319200 | -0.801189 | 1.012756e-48 | -8.615850e-47 |
| Msa0029540 | Msa0320100 | -0.819495 | 1.127369e-52 | -8.615850e-47 |
| Msa0029540 | Msa0326670 | -0.842981 | 1.854990e-58 | -8.615850e-47 |
| Msa0029540 | Msa0328210 | -0.838216 | 3.280519e-57 | -8.615850e-47 |
| Msa0029540 | Msa0342200 | -0.801185 | 1.014616e-48 | -8.615850e-47 |
| Msa0029540 | Msa0356890 | 0.824733 | 6.879475e-54 | -8.615850e-47 |
| Msa0029540 | Msa0369570 | -0.806392 | 8.409562e-50 | -8.615850e-47 |
| Msa0029540 | Msa0374250 | -0.818689 | 1.719430e-52 | -8.615850e-47 |
| Msa0029540 | Msa0378080 | -0.813071 | 3.080776e-51 | -8.615850e-47 |
| Msa0029540 | Msa0393680 | -0.809594 | 1.751675e-50 | -8.615850e-47 |
| Msa0029540 | Msa0393710 | -0.804548 | 2.048718e-49 | -8.615850e-47 |
| Msa0029540 | Msa0414950 | 0.859628 | 3.625145e-63 | -8.615850e-47 |
| Msa0029540 | Msa0421780 | 0.845462 | 4.000519e-59 | -8.615850e-47 |
| Msa0029540 | Msa0423360 | 0.890897 | 6.500179e-74 | -8.615850e-47 |
| Msa0029540 | Msa0425940 | -0.828594 | 8.242121e-55 | -8.615850e-47 |
| Msa0029540 | Msa0426020 | -0.821375 | 4.175024e-53 | -8.615850e-47 |
| Msa0029540 | Msa0426160 | -0.817840 | 2.676789e-52 | -8.615850e-47 |
| Msa0029540 | Msa0429520 | 0.826085 | 3.291137e-54 | -8.615850e-47 |
| Msa0029540 | Msa0436280 | 0.875491 | 2.954426e-68 | -8.615850e-47 |
| Msa0029540 | Msa0437710 | -0.834411 | 3.045210e-56 | -8.615850e-47 |
| Msa0029540 | Msa0441800 | -0.802306 | 5.971966e-49 | -8.615850e-47 |
| Msa0029540 | Msa0459770 | 0.814610 | 1.411038e-51 | -8.615850e-47 |
| Msa0029540 | Msa0467900 | 0.853140 | 2.909594e-61 | -8.615850e-47 |
| Msa0029540 | Msa0467920 | 0.805161 | 1.525882e-49 | -8.615850e-47 |
| Msa0029540 | Msa0467960 | 0.856516 | 3.051106e-62 | -8.615850e-47 |
| Msa0029540 | Msa0469790 | -0.812368 | 4.391425e-51 | -8.615850e-47 |
| Msa0029540 | Msa0469820 | -0.809506 | 1.829735e-50 | -8.615850e-47 |
| Msa0029540 | Msa0469910 | 0.867005 | 1.881748e-65 | -8.615850e-47 |
| Msa0029540 | Msa0473240 | -0.801208 | 1.003732e-48 | -8.615850e-47 |
| Msa0029540 | Msa0480320 | -0.829317 | 5.506937e-55 | -8.615850e-47 |
| Msa0029540 | Msa0482680 | -0.840694 | 7.453643e-58 | -8.615850e-47 |
| Msa0029540 | Msa0490300 | -0.815858 | 7.451808e-52 | -8.615850e-47 |
| Msa0029540 | Msa0490350 | -0.830744 | 2.471081e-55 | -8.615850e-47 |
| Msa0029540 | Msa0508200 | -0.837744 | 4.337508e-57 | -8.615850e-47 |
| Msa0029540 | Msa0509970 | -0.833773 | 4.397653e-56 | -8.615850e-47 |
| Msa0029540 | Msa0518040 | -0.803212 | 3.881985e-49 | -8.615850e-47 |
| Msa0029540 | Msa0521310 | -0.841521 | 4.517707e-58 | -8.615850e-47 |
| Msa0029540 | Msa0524120 | -0.800765 | 1.235948e-48 | -8.615850e-47 |
| Msa0029540 | Msa0524890 | 0.801586 | 8.394872e-49 | -8.615850e-47 |
| Msa0029540 | Msa0525340 | -0.808259 | 3.381579e-50 | -8.615850e-47 |
| Msa0029540 | Msa0526640 | 0.841460 | 4.690027e-58 | -8.615850e-47 |
| Msa0029540 | Msa0526700 | -0.857889 | 1.199725e-62 | -8.615850e-47 |
| Msa0029540 | Msa0526710 | -0.898379 | 5.618776e-77 | -8.615850e-47 |
| Msa0029540 | Msa0527590 | -0.831876 | 1.301895e-55 | -8.615850e-47 |
| Msa0029540 | Msa0527600 | -0.822580 | 2.194938e-53 | -8.615850e-47 |
| Msa0029540 | Msa0529950 | -0.824557 | 7.566617e-54 | -8.615850e-47 |
| Msa0029540 | Msa0531990 | 0.826692 | 2.359051e-54 | -8.615850e-47 |
| Msa0029540 | Msa0532100 | 0.834978 | 2.191735e-56 | -8.615850e-47 |
| Msa0029540 | Msa0532120 | 0.801840 | 7.448484e-49 | -8.615850e-47 |
| Msa0029540 | Msa0532550 | -0.836526 | 8.885818e-57 | -8.615850e-47 |
| Msa0029540 | Msa0534590 | -0.803033 | 4.229147e-49 | -8.615850e-47 |
| Msa0029540 | Msa0535030 | -0.860535 | 1.930755e-63 | -8.615850e-47 |
| Msa0029540 | Msa0535060 | -0.862029 | 6.767483e-64 | -8.615850e-47 |
| Msa0029540 | Msa0535450 | -0.839495 | 1.531599e-57 | -8.615850e-47 |
| Msa0029540 | Msa0540870 | -0.803802 | 2.929754e-49 | -8.615850e-47 |
| Msa0029540 | Msa0542160 | -0.802054 | 6.730881e-49 | -8.615850e-47 |
| Msa0029540 | Msa0546380 | -0.852070 | 5.876524e-61 | -8.615850e-47 |
| Msa0029540 | Msa0553220 | 0.821167 | 4.662137e-53 | -8.615850e-47 |
| Msa0029540 | Msa0568820 | -0.806968 | 6.355478e-50 | -8.615850e-47 |
| Msa0029540 | Msa0574760 | 0.856929 | 2.306311e-62 | -8.615850e-47 |
| Msa0029540 | Msa0575990 | 0.828695 | 7.792669e-55 | -8.615850e-47 |
| Msa0029540 | Msa0576100 | 0.833779 | 4.382521e-56 | -8.615850e-47 |
| Msa0029540 | Msa0579290 | -0.803739 | 3.019190e-49 | -8.615850e-47 |
| Msa0029540 | Msa0579390 | -0.806553 | 7.779119e-50 | -8.615850e-47 |
| Msa0029540 | Msa0583930 | -0.815753 | 7.866554e-52 | -8.615850e-47 |
| Msa0029540 | Msa0583940 | -0.835919 | 1.267334e-56 | -8.615850e-47 |
| Msa0029540 | Msa0590680 | -0.817585 | 3.054964e-52 | -8.615850e-47 |
| Msa0029540 | Msa0590800 | -0.804435 | 2.162902e-49 | -8.615850e-47 |
| Msa0029540 | Msa0591060 | -0.803042 | 4.210891e-49 | -8.615850e-47 |
| Msa0029540 | Msa0591160 | 0.805570 | 1.252397e-49 | -8.615850e-47 |
| Msa0029540 | Msa0591770 | -0.845446 | 4.041770e-59 | -8.615850e-47 |
| Msa0029540 | Msa0604360 | -0.827478 | 1.530047e-54 | -8.615850e-47 |
| Msa0029540 | Msa0607290 | 0.808666 | 2.768921e-50 | -8.615850e-47 |
| Msa0029540 | Msa0619070 | -0.808485 | 3.026577e-50 | -8.615850e-47 |
| Msa0029540 | Msa0619470 | -0.833869 | 4.162586e-56 | -8.615850e-47 |
| Msa0029540 | Msa0619510 | -0.817210 | 3.711427e-52 | -8.615850e-47 |
| Msa0029540 | Msa0621890 | -0.824188 | 9.240799e-54 | -8.615850e-47 |
| Msa0029540 | Msa0638280 | -0.818480 | 1.918020e-52 | -8.615850e-47 |
| Msa0029540 | Msa0638320 | -0.823035 | 1.719985e-53 | -8.615850e-47 |
| Msa0029540 | Msa0638690 | -0.821452 | 4.007976e-53 | -8.615850e-47 |
| Msa0029540 | Msa0639120 | -0.804828 | 1.790812e-49 | -8.615850e-47 |
| Msa0029540 | Msa0642650 | -0.836233 | 1.055353e-56 | -8.615850e-47 |
| Msa0029540 | Msa0647450 | 0.822408 | 2.407435e-53 | -8.615850e-47 |
| Msa0029540 | Msa0659600 | -0.804941 | 1.696572e-49 | -8.615850e-47 |
| Msa0029540 | Msa0669340 | -0.802334 | 5.894444e-49 | -8.615850e-47 |
| Msa0029540 | Msa0669850 | -0.867273 | 1.545347e-65 | -8.615850e-47 |
| Msa0029540 | Msa0670980 | -0.828061 | 1.108002e-54 | -8.615850e-47 |
| Msa0029540 | Msa0677270 | -0.822874 | 1.875530e-53 | -8.615850e-47 |
| Msa0029540 | Msa0677400 | -0.812109 | 5.001205e-51 | -8.615850e-47 |
| Msa0029540 | Msa0681890 | -0.818753 | 1.662904e-52 | -8.615850e-47 |
| Msa0029540 | Msa0684500 | -0.824128 | 9.543508e-54 | -8.615850e-47 |
| Msa0029540 | Msa0691050 | -0.819772 | 9.745691e-53 | -8.615850e-47 |
| Msa0029540 | Msa0701860 | 0.814554 | 1.452388e-51 | -8.615850e-47 |
| Msa0029540 | Msa0703590 | -0.853819 | 1.857456e-61 | -8.615850e-47 |
| Msa0029540 | Msa0709190 | -0.855696 | 5.304747e-62 | -8.615850e-47 |
| Msa0029540 | Msa0712980 | -0.803637 | 3.169916e-49 | -8.615850e-47 |
| Msa0029540 | Msa0716450 | -0.801961 | 7.033951e-49 | -8.615850e-47 |
| Msa0029540 | Msa0724580 | -0.804976 | 1.668217e-49 | -8.615850e-47 |
| Msa0029540 | Msa0725920 | -0.817209 | 3.713627e-52 | -8.615850e-47 |
| Msa0029540 | Msa0730180 | -0.821122 | 4.775949e-53 | -8.615850e-47 |
| Msa0029540 | Msa0735620 | 0.813866 | 2.060356e-51 | -8.615850e-47 |
| Msa0029540 | Msa0743680 | -0.844728 | 6.317528e-59 | -8.615850e-47 |
| Msa0029540 | Msa0754720 | 0.897757 | 1.031174e-76 | -8.615850e-47 |
| Msa0029540 | Msa0756630 | 0.866605 | 2.524031e-65 | -8.615850e-47 |
| Msa0029540 | Msa0757450 | 0.838583 | 2.638342e-57 | -8.615850e-47 |
| Msa0029540 | Msa0757500 | 0.844766 | 6.170374e-59 | -8.615850e-47 |
| Msa0029540 | Msa0758320 | -0.804989 | 1.657271e-49 | -8.615850e-47 |
| Msa0029540 | Msa0766470 | -0.807767 | 4.304539e-50 | -8.615850e-47 |
| Msa0029540 | Msa0777570 | 0.814372 | 1.592923e-51 | -8.615850e-47 |
| Msa0029540 | Msa0784620 | -0.813451 | 2.543104e-51 | -8.615850e-47 |
| Msa0029540 | Msa0789570 | -0.820991 | 5.119180e-53 | -8.615850e-47 |
| Msa0029540 | Msa0802470 | 0.804909 | 1.722689e-49 | -8.615850e-47 |
| Msa0029540 | Msa0804680 | -0.808922 | 2.440376e-50 | -8.615850e-47 |
| Msa0029540 | Msa0806300 | -0.807205 | 5.663792e-50 | -8.615850e-47 |
| Msa0029540 | Msa0812450 | -0.801702 | 7.947802e-49 | -8.615850e-47 |
| Msa0029540 | Msa0824730 | -0.801342 | 9.420630e-49 | -8.615850e-47 |
| Msa0029540 | Msa0829620 | -0.807876 | 4.079233e-50 | -8.615850e-47 |
| Msa0029540 | Msa0837350 | 0.816906 | 4.342260e-52 | -8.615850e-47 |
| Msa0029540 | Msa0837980 | -0.806572 | 7.706466e-50 | -8.615850e-47 |
| Msa0029540 | Msa0837990 | -0.828556 | 8.418918e-55 | -8.615850e-47 |
| Msa0029540 | Msa0846030 | -0.809303 | 2.023077e-50 | -8.615850e-47 |
| Msa0029540 | Msa0850960 | -0.806068 | 9.844111e-50 | -8.615850e-47 |
| Msa0029540 | Msa0852730 | -0.812069 | 5.103520e-51 | -8.615850e-47 |
| Msa0029540 | Msa0853320 | -0.803408 | 3.536163e-49 | -8.615850e-47 |
| Msa0029540 | Msa0854570 | -0.818100 | 2.337682e-52 | -8.615850e-47 |
| Msa0029540 | Msa0855160 | 0.811201 | 7.880782e-51 | -8.615850e-47 |
| Msa0029540 | Msa0861040 | 0.814793 | 1.285552e-51 | -8.615850e-47 |
| Msa0029540 | Msa0863370 | -0.812302 | 4.539903e-51 | -8.615850e-47 |
| Msa0029540 | Msa0863800 | -0.842384 | 2.672057e-58 | -8.615850e-47 |
| Msa0029540 | Msa0867050 | 0.820833 | 5.564512e-53 | -8.615850e-47 |
| Msa0029540 | Msa0874500 | -0.800033 | 1.741994e-48 | -8.615850e-47 |
| Msa0029540 | Msa0878400 | -0.804068 | 2.579585e-49 | -8.615850e-47 |
| Msa0029540 | Msa0881480 | -0.828208 | 1.021595e-54 | -8.615850e-47 |
| Msa0029540 | Msa0890250 | -0.842189 | 3.010115e-58 | -8.615850e-47 |
| Msa0029540 | Msa0891040 | -0.810636 | 1.044486e-50 | -8.615850e-47 |
| Msa0029540 | Msa0896210 | -0.800449 | 1.433707e-48 | -8.615850e-47 |
| Msa0029540 | Msa0896220 | -0.824232 | 9.025236e-54 | -8.615850e-47 |
| Msa0029540 | Msa0907700 | -0.840563 | 8.063136e-58 | -8.615850e-47 |
| Msa0029540 | Msa0908170 | -0.829200 | 5.881020e-55 | -8.615850e-47 |
| Msa0029540 | Msa0922540 | -0.835209 | 1.917182e-56 | -8.615850e-47 |
| Msa0029540 | Msa0925160 | -0.829638 | 4.603225e-55 | -8.615850e-47 |
| Msa0029540 | Msa0930910 | 0.861693 | 8.576657e-64 | -8.615850e-47 |
| Msa0029540 | Msa0933440 | -0.825897 | 3.648137e-54 | -8.615850e-47 |
| Msa0029540 | Msa0936270 | -0.812752 | 3.618719e-51 | -8.615850e-47 |
| Msa0029540 | Msa0947530 | 0.801777 | 7.673560e-49 | -8.615850e-47 |
| Msa0029540 | Msa0955260 | -0.816057 | 6.726880e-52 | -8.615850e-47 |
| Msa0029540 | Msa0959010 | -0.822204 | 2.684819e-53 | -8.615850e-47 |
| Msa0029540 | Msa0966420 | -0.820530 | 6.535170e-53 | -8.615850e-47 |
| Msa0029540 | Msa0981000 | -0.804276 | 2.334900e-49 | -8.615850e-47 |
| Msa0029540 | Msa0981010 | -0.803646 | 3.156594e-49 | -8.615850e-47 |
| Msa0029540 | Msa0981820 | 0.818010 | 2.450230e-52 | -8.615850e-47 |
| Msa0029540 | Msa0990520 | -0.816855 | 4.459199e-52 | -8.615850e-47 |
| Msa0029540 | Msa0990960 | -0.804885 | 1.742451e-49 | -8.615850e-47 |
| Msa0029540 | Msa0993530 | -0.835931 | 1.259166e-56 | -8.615850e-47 |
| Msa0029540 | Msa0996080 | -0.828613 | 8.155941e-55 | -8.615850e-47 |
| Msa0029540 | Msa1000300 | -0.858996 | 5.612000e-63 | -8.615850e-47 |
| Msa0029540 | Msa1004900 | 0.833963 | 3.942105e-56 | -8.615850e-47 |
| Msa0029540 | Msa1007610 | 0.841762 | 3.903745e-58 | -8.615850e-47 |
| Msa0029540 | Msa1015060 | -0.823527 | 1.319993e-53 | -8.615850e-47 |
| Msa0029540 | Msa1019020 | -0.813332 | 2.700549e-51 | -8.615850e-47 |
| Msa0029540 | Msa1020710 | -0.804538 | 2.059328e-49 | -8.615850e-47 |
| Msa0029540 | Msa1037000 | -0.841913 | 3.561579e-58 | -8.615850e-47 |
| Msa0029540 | Msa1037700 | 0.826538 | 2.568580e-54 | -8.615850e-47 |
| Msa0029540 | Msa1040120 | -0.863890 | 1.801326e-64 | -8.615850e-47 |
| Msa0029540 | Msa1044340 | -0.861095 | 1.304684e-63 | -8.615850e-47 |
| Msa0029540 | Msa1054240 | -0.823539 | 1.312106e-53 | -8.615850e-47 |
| Msa0029540 | Msa1058760 | -0.810678 | 1.023114e-50 | -8.615850e-47 |
| Msa0029540 | Msa1067440 | 0.814755 | 1.310575e-51 | -8.615850e-47 |
| Msa0029540 | Msa1069660 | 0.832626 | 8.492238e-56 | -8.615850e-47 |
| Msa0029540 | Msa1072460 | 0.839311 | 1.709592e-57 | -8.615850e-47 |
| Msa0029540 | Msa1079370 | 0.804039 | 2.616052e-49 | -8.615850e-47 |
| Msa0029540 | Msa1089530 | -0.803272 | 3.773575e-49 | -8.615850e-47 |
| Msa0029540 | Msa1092820 | -0.815210 | 1.038930e-51 | -8.615850e-47 |
| Msa0029540 | Msa1115330 | -0.837218 | 5.916040e-57 | -8.615850e-47 |
| Msa0029540 | Msa1124680 | 0.803278 | 3.762673e-49 | -8.615850e-47 |
| Msa0029540 | Msa1130210 | 0.848424 | 6.182617e-60 | -8.615850e-47 |
| Msa0029540 | Msa1130270 | 0.846491 | 2.100723e-59 | -8.615850e-47 |
| Msa0029540 | Msa1132520 | -0.855492 | 6.082438e-62 | -8.615850e-47 |
| Msa0029540 | Msa1143620 | -0.813932 | 1.992408e-51 | -8.615850e-47 |
| Msa0029540 | Msa1147570 | -0.810866 | 9.312664e-51 | -8.615850e-47 |
| Msa0029540 | Msa1157420 | 0.805240 | 1.468439e-49 | -8.615850e-47 |
| Msa0029540 | Msa1159100 | -0.814676 | 1.364962e-51 | -8.615850e-47 |
| Msa0029540 | Msa1183390 | -0.801082 | 1.064860e-48 | -8.615850e-47 |
| Msa0029540 | Msa1193950 | 0.816911 | 4.331801e-52 | -8.615850e-47 |
| Msa0029540 | Msa1197590 | -0.815596 | 8.525734e-52 | -8.615850e-47 |
| Msa0029540 | Msa1204120 | -0.815887 | 7.343283e-52 | -8.615850e-47 |
| Msa0029540 | Msa1212380 | -0.810620 | 1.052630e-50 | -8.615850e-47 |
| Msa0029540 | Msa1214880 | -0.800653 | 1.302776e-48 | -8.615850e-47 |
| Msa0029540 | Msa1217860 | -0.858268 | 9.255243e-63 | -8.615850e-47 |
| Msa0029540 | Msa1219260 | -0.812303 | 4.537216e-51 | -8.615850e-47 |
| Msa0029540 | Msa1220230 | -0.803084 | 4.126914e-49 | -8.615850e-47 |
| Msa0029540 | Msa1226510 | -0.849122 | 3.959437e-60 | -8.615850e-47 |
| Msa0029540 | Msa1236070 | 0.812361 | 4.406780e-51 | -8.615850e-47 |
| Msa0029540 | Msa1237030 | -0.844892 | 5.705277e-59 | -8.615850e-47 |
| Msa0029540 | Msa1246530 | 0.808483 | 3.029048e-50 | -8.615850e-47 |
| Msa0029540 | Msa1249920 | -0.819863 | 9.286826e-53 | -8.615850e-47 |
| Msa0029540 | Msa1263660 | -0.810378 | 1.187679e-50 | -8.615850e-47 |
| Msa0029540 | Msa1264020 | -0.809413 | 1.915544e-50 | -8.615850e-47 |
| Msa0029540 | Msa1265070 | -0.819303 | 1.246537e-52 | -8.615850e-47 |
| Msa0029540 | Msa1265960 | -0.841275 | 5.243566e-58 | -8.615850e-47 |
| Msa0029540 | Msa1266960 | -0.804660 | 1.942133e-49 | -8.615850e-47 |
| Msa0029540 | Msa1269580 | 0.875488 | 2.963240e-68 | -8.615850e-47 |
| Msa0029540 | Msa1280130 | -0.812003 | 5.275254e-51 | -8.615850e-47 |
| Msa0029540 | Msa1284520 | -0.813048 | 3.116835e-51 | -8.615850e-47 |
| Msa0029540 | Msa1300860 | -0.814061 | 1.865933e-51 | -8.615850e-47 |
| Msa0029540 | Msa1311960 | -0.802652 | 5.068935e-49 | -8.615850e-47 |
| Msa0029540 | Msa1323060 | -0.811214 | 7.829035e-51 | -8.615850e-47 |
| Msa0029540 | Msa1323190 | -0.819913 | 9.047377e-53 | -8.615850e-47 |
| Msa0029540 | Msa1324000 | -0.816385 | 5.682865e-52 | -8.615850e-47 |
| Msa0029540 | Msa1327050 | -0.800787 | 1.223382e-48 | -8.615850e-47 |
| Msa0029540 | Msa1331920 | -0.802216 | 6.232402e-49 | -8.615850e-47 |
| Msa0029540 | Msa1335860 | -0.803905 | 2.788680e-49 | -8.615850e-47 |
| Msa0029540 | Msa1337730 | -0.834612 | 2.710390e-56 | -8.615850e-47 |
| Msa0029540 | Msa1353340 | -0.801817 | 7.528504e-49 | -8.615850e-47 |
| Msa0029540 | Msa1360890 | 0.851855 | 6.761000e-61 | -8.615850e-47 |
| Msa0029540 | Msa1362510 | -0.854258 | 1.387100e-61 | -8.615850e-47 |
| Msa0029540 | Msa1364470 | 0.823341 | 1.459310e-53 | -8.615850e-47 |
| Msa0029540 | Msa1367940 | -0.801584 | 8.403564e-49 | -8.615850e-47 |
| Msa0029540 | Msa1373510 | -0.844508 | 7.237577e-59 | -8.615850e-47 |
| Msa0029540 | Msa1382310 | -0.849166 | 3.849226e-60 | -8.615850e-47 |
| Msa0029540 | Msa1385620 | -0.800086 | 1.699457e-48 | -8.615850e-47 |
| Msa0029540 | Msa1385900 | -0.804999 | 1.649817e-49 | -8.615850e-47 |
| Msa0029540 | Msa1390120 | -0.839705 | 1.350166e-57 | -8.615850e-47 |
| Msa0029540 | Msa1390310 | -0.894187 | 3.122357e-75 | -8.615850e-47 |
| Msa0029540 | Msa1390770 | -0.827634 | 1.403941e-54 | -8.615850e-47 |
| Msa0029540 | Msa1395530 | -0.845097 | 5.022103e-59 | -8.615850e-47 |
| Msa0029540 | Msa1395870 | -0.801870 | 7.341055e-49 | -8.615850e-47 |
| Msa0029540 | Msa1399560 | -0.801598 | 8.350334e-49 | -8.615850e-47 |
| Msa0029540 | Msa1403930 | 0.831170 | 1.943039e-55 | -8.615850e-47 |
| Msa0029540 | Msa1404540 | -0.807527 | 4.838900e-50 | -8.615850e-47 |
| Msa0029540 | Msa1405180 | -0.803574 | 3.267102e-49 | -8.615850e-47 |
| Msa0029540 | Msa1410430 | 0.820372 | 7.100577e-53 | -8.615850e-47 |
| Msa0029540 | Msa1410760 | 0.811707 | 6.117802e-51 | -8.615850e-47 |
| Msa0029540 | Msa1412080 | -0.809818 | 1.567993e-50 | -8.615850e-47 |
| Msa0029540 | Msa1412140 | -0.823453 | 1.373610e-53 | -8.615850e-47 |
| Msa0029540 | Msa1415240 | 0.815249 | 1.018382e-51 | -8.615850e-47 |
| Msa0029540 | Msa1425250 | -0.811173 | 7.993283e-51 | -8.615850e-47 |
| Msa0029540 | Msa1429360 | 0.871897 | 4.814858e-67 | -8.615850e-47 |
| Msa0029540 | Msa1431000 | -0.840899 | 6.586148e-58 | -8.615850e-47 |
| Msa0029540 | Msa1431060 | -0.805103 | 1.569082e-49 | -8.615850e-47 |
| Msa0029540 | Msa1432640 | -0.826401 | 2.768590e-54 | -8.615850e-47 |
| Msa0029540 | Msa1439960 | -0.864116 | 1.532508e-64 | -8.615850e-47 |
| Msa0029540 | Msa1440600 | -0.802105 | 6.568331e-49 | -8.615850e-47 |
| Msa0029540 | Msa1442220 | 0.855071 | 8.069854e-62 | -8.615850e-47 |
| Msa0029540 | Msa1447230 | -0.814798 | 1.282251e-51 | -8.615850e-47 |
| Msa0029540 | Msa1449880 | -0.812316 | 4.506880e-51 | -8.615850e-47 |
| Msa0029540 | Msa1454110 | -0.803383 | 3.579375e-49 | -8.615850e-47 |
| Msa0029540 | Msa1456650 | -0.805142 | 1.539838e-49 | -8.615850e-47 |
| Msa0029540 | Msa1459390 | -0.818736 | 1.677825e-52 | -8.615850e-47 |
| Msa0029540 | Msa1463970 | -0.842747 | 2.140143e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0029540 | MtrunA17_Chr1g0194141 | 97.521 | 121 | 3 | 0 | 1 | 121 | 1 | 121 | 7.34e-86 | 245 |
| Msa0029540 | MtrunA17_Chr7g0260981 | 67.797 | 118 | 38 | 0 | 1 | 118 | 1 | 118 | 1.73e-59 | 179 |
| Msa0029540 | MtrunA17_Chr4g0069171 | 68.644 | 118 | 37 | 0 | 1 | 118 | 1 | 118 | 2.20e-59 | 178 |
| Msa0029540 | MtrunA17_Chr2g0288531 | 54.310 | 116 | 53 | 0 | 5 | 120 | 4 | 119 | 1.52e-43 | 138 |
| Msa0029540 | MtrunA17_Chr4g0024721 | 54.310 | 116 | 53 | 0 | 3 | 118 | 2 | 117 | 1.59e-43 | 138 |
| Msa0029540 | MtrunA17_Chr2g0322571 | 55.263 | 114 | 51 | 0 | 5 | 118 | 4 | 117 | 2.70e-42 | 135 |
| Msa0029540 | MtrunA17_Chr4g0056301 | 52.586 | 116 | 55 | 0 | 5 | 120 | 4 | 119 | 2.43e-41 | 133 |
| Msa0029540 | MtrunA17_Chr4g0019141 | 45.536 | 112 | 59 | 2 | 6 | 115 | 5 | 116 | 6.19e-27 | 96.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0029540 | AT3G06420.1 | 69.027 | 113 | 35 | 0 | 6 | 118 | 7 | 119 | 8.59e-57 | 172 |
| Msa0029540 | AT3G15580.1 | 70.536 | 112 | 33 | 0 | 7 | 118 | 4 | 115 | 1.15e-56 | 172 |
| Msa0029540 | AT4G21980.1 | 57.265 | 117 | 50 | 0 | 5 | 121 | 4 | 120 | 5.00e-45 | 142 |
| Msa0029540 | AT4G21980.2 | 57.265 | 117 | 50 | 0 | 5 | 121 | 19 | 135 | 1.19e-44 | 142 |
| Msa0029540 | AT1G62040.1 | 56.897 | 116 | 50 | 0 | 3 | 118 | 2 | 117 | 2.21e-44 | 140 |
| Msa0029540 | AT2G45170.2 | 53.719 | 121 | 56 | 0 | 1 | 121 | 1 | 121 | 3.29e-44 | 140 |
| Msa0029540 | AT2G45170.1 | 53.719 | 121 | 56 | 0 | 1 | 121 | 1 | 121 | 3.29e-44 | 140 |
| Msa0029540 | AT4G04620.3 | 53.448 | 116 | 54 | 0 | 5 | 120 | 4 | 119 | 2.73e-42 | 135 |
| Msa0029540 | AT4G04620.2 | 53.448 | 116 | 54 | 0 | 5 | 120 | 4 | 119 | 2.73e-42 | 135 |
| Msa0029540 | AT4G04620.1 | 53.448 | 116 | 54 | 0 | 5 | 120 | 4 | 119 | 2.73e-42 | 135 |
| Msa0029540 | AT2G05630.1 | 53.509 | 114 | 53 | 0 | 5 | 118 | 4 | 117 | 6.18e-42 | 134 |
| Msa0029540 | AT4G16520.2 | 54.386 | 114 | 52 | 0 | 5 | 118 | 4 | 117 | 1.46e-41 | 134 |
| Msa0029540 | AT4G16520.1 | 54.386 | 114 | 52 | 0 | 5 | 118 | 4 | 117 | 1.46e-41 | 134 |
| Msa0029540 | AT3G60640.1 | 52.174 | 115 | 55 | 0 | 6 | 120 | 5 | 119 | 5.32e-41 | 132 |
| Msa0029540 | AT2G05630.2 | 52.778 | 108 | 51 | 0 | 11 | 118 | 54 | 161 | 1.39e-38 | 127 |
| Msa0029540 | AT4G16520.3 | 55.682 | 88 | 39 | 0 | 31 | 118 | 30 | 117 | 1.06e-30 | 106 |
| Msa0029540 | AT1G62040.2 | 52.688 | 93 | 44 | 0 | 3 | 95 | 2 | 94 | 1.61e-29 | 102 |
Find 35 sgRNAs with CRISPR-Local
Find 110 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGGGATTCGATCGGGGTATT+TGG | 0.168599 | 1_1:+54829913 | None:intergenic |
| ATGAATAAGAATGCAATAAT+TGG | 0.305135 | 1_1:+54829233 | None:intergenic |
| TACCAAACGTAAACTCGTTC+TGG | 0.338661 | 1_1:+54830050 | None:intergenic |
| TCCAGCTGGTAAATTAAGTC+TGG | 0.354424 | 1_1:+54829589 | None:intergenic |
| CAAATGCGATCTGCCTCATT+TGG | 0.355422 | 1_1:-54829782 | Msa0029540:CDS |
| ATGTATAACATTGAACCATT+TGG | 0.355581 | 1_1:-54829198 | Msa0029540:three_prime_UTR |
| TGTATAACATTGAACCATTT+GGG | 0.369658 | 1_1:-54829197 | Msa0029540:three_prime_UTR |
| AAGAATACTTTACCTCAAAC+TGG | 0.387404 | 1_1:-54829545 | Msa0029540:intron |
| GGACTTACGGGGATTCGATC+GGG | 0.390336 | 1_1:+54829905 | None:intergenic |
| ATATTTGTTGTATTGTTGTA+TGG | 0.397542 | 1_1:-54829264 | Msa0029540:three_prime_UTR |
| CAAATTCATAATAGCCCAAA+TGG | 0.408070 | 1_1:+54829183 | None:intergenic |
| TATAGCACTGAGAAAACCTT+TGG | 0.412532 | 1_1:-54829366 | Msa0029540:CDS |
| CATGATCATTGATGATGTAT+AGG | 0.421743 | 1_1:-54829154 | Msa0029540:three_prime_UTR |
| TGCTATTGCAGCTAGTATGA+TGG | 0.424492 | 1_1:-54829439 | Msa0029540:intron |
| GCAAGTTTATTACCAGTTTG+AGG | 0.425620 | 1_1:+54829533 | None:intergenic |
| CAAATGAGGCAGATCGCATT+TGG | 0.427187 | 1_1:+54829783 | None:intergenic |
| CAATACAACAAATATTTACA+AGG | 0.439972 | 1_1:+54829272 | None:intergenic |
| AATAGTTGACATTTATGTAC+AGG | 0.446245 | 1_1:+54829341 | None:intergenic |
| TCCAGACTTAATTTACCAGC+TGG | 0.456823 | 1_1:-54829590 | Msa0029540:CDS |
| TCTTCTTCTTCAGGTGATTG+TGG | 0.457646 | 1_1:-54829815 | Msa0029540:intron |
| CTCTGTTTATAGATCATTCA+AGG | 0.464700 | 1_1:-54829415 | Msa0029540:CDS |
| TTCCAGAACGAGTTTACGTT+TGG | 0.466165 | 1_1:-54830052 | Msa0029540:intron |
| ACAAGGTTTCTGATATAAGA+AGG | 0.484325 | 1_1:+54829289 | None:intergenic |
| TAGCAAGACAAGAGTTGCTC+TGG | 0.491262 | 1_1:+54830109 | None:intergenic |
| GGGACTTACGGGGATTCGAT+CGG | 0.493031 | 1_1:+54829904 | None:intergenic |
| ACATTAATCAACAAGGATGT+AGG | 0.509610 | 1_1:+54829089 | None:intergenic |
| CTTTGTTACATTAATCAACA+AGG | 0.538506 | 1_1:+54829082 | None:intergenic |
| TTATAGATCATTCAAGGATG+AGG | 0.555700 | 1_1:-54829409 | Msa0029540:CDS |
| AGATCATTCAAGGATGAGGA+TGG | 0.557576 | 1_1:-54829405 | Msa0029540:CDS |
| CATTTATGTACAGGATCCAA+AGG | 0.566947 | 1_1:+54829350 | None:intergenic |
| GTTCCACGAGACTTGTCAGT+TGG | 0.569472 | 1_1:-54829635 | Msa0029540:CDS |
| AATAAGAATGCAATAATTGG+TGG | 0.588342 | 1_1:+54829236 | None:intergenic |
| GACTTACGGGGATTCGATCG+GGG | 0.607489 | 1_1:+54829906 | None:intergenic |
| TTTCTGATATAAGAAGGTAG+TGG | 0.639447 | 1_1:+54829295 | None:intergenic |
| TGTCCAACTGACAAGTCTCG+TGG | 0.654531 | 1_1:+54829632 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAATTAGATTTAAGATT+AGG | + | chr1_1:54829662-54829681 | None:intergenic | 10.0% |
| !!! | AAAAAATTAGATTTAAGATT+AGG | + | chr1_1:54829662-54829681 | None:intergenic | 10.0% |
| !! | AAGCCAAATTGAAATTAAAT+TGG | + | chr1_1:54829311-54829330 | None:intergenic | 20.0% |
| !!! | AATAATTTTTCTTCTTCTTC+AGG | - | chr1_1:54829340-54829359 | Msa0029540:exon | 20.0% |
| !! | CAATACAACAAATATTTACA+AGG | + | chr1_1:54829895-54829914 | None:intergenic | 20.0% |
| !!! | ATATTTGTTGTATTGTTGTA+TGG | - | chr1_1:54829900-54829919 | Msa0029540:intron | 20.0% |
| !! | ATGAATAAGAATGCAATAAT+TGG | + | chr1_1:54829934-54829953 | None:intergenic | 20.0% |
| !! | AAGCCAAATTGAAATTAAAT+TGG | + | chr1_1:54829311-54829330 | None:intergenic | 20.0% |
| !!! | AATAATTTTTCTTCTTCTTC+AGG | - | chr1_1:54829340-54829359 | Msa0029540:exon | 20.0% |
| !! | CAATACAACAAATATTTACA+AGG | + | chr1_1:54829895-54829914 | None:intergenic | 20.0% |
| !!! | ATATTTGTTGTATTGTTGTA+TGG | - | chr1_1:54829900-54829919 | Msa0029540:intron | 20.0% |
| !! | ATGAATAAGAATGCAATAAT+TGG | + | chr1_1:54829934-54829953 | None:intergenic | 20.0% |
| ! | TACGAAAATCAATGATTGAT+GGG | + | chr1_1:54829283-54829302 | None:intergenic | 25.0% |
| ! | ATACGAAAATCAATGATTGA+TGG | + | chr1_1:54829284-54829303 | None:intergenic | 25.0% |
| ! | CCAAATTGAAATTAAATTGG+AGG | + | chr1_1:54829308-54829327 | None:intergenic | 25.0% |
| !! | CCTCCAATTTAATTTCAATT+TGG | - | chr1_1:54829305-54829324 | Msa0029540:three_prime_UTR | 25.0% |
| ! | AATAGTTGACATTTATGTAC+AGG | + | chr1_1:54829826-54829845 | None:intergenic | 25.0% |
| ! | AATAAGAATGCAATAATTGG+TGG | + | chr1_1:54829931-54829950 | None:intergenic | 25.0% |
| ! | ATGTATAACATTGAACCATT+TGG | - | chr1_1:54829966-54829985 | Msa0029540:intron | 25.0% |
| ! | TGTATAACATTGAACCATTT+GGG | - | chr1_1:54829967-54829986 | Msa0029540:intron | 25.0% |
| ! | CTTTGTTACATTAATCAACA+AGG | + | chr1_1:54830085-54830104 | None:intergenic | 25.0% |
| ! | TACGAAAATCAATGATTGAT+GGG | + | chr1_1:54829283-54829302 | None:intergenic | 25.0% |
| ! | ATACGAAAATCAATGATTGA+TGG | + | chr1_1:54829284-54829303 | None:intergenic | 25.0% |
| ! | CCAAATTGAAATTAAATTGG+AGG | + | chr1_1:54829308-54829327 | None:intergenic | 25.0% |
| !! | CCTCCAATTTAATTTCAATT+TGG | - | chr1_1:54829305-54829324 | Msa0029540:three_prime_UTR | 25.0% |
| ! | AATAGTTGACATTTATGTAC+AGG | + | chr1_1:54829826-54829845 | None:intergenic | 25.0% |
| ! | AATAAGAATGCAATAATTGG+TGG | + | chr1_1:54829931-54829950 | None:intergenic | 25.0% |
| ! | ATGTATAACATTGAACCATT+TGG | - | chr1_1:54829966-54829985 | Msa0029540:intron | 25.0% |
| ! | TGTATAACATTGAACCATTT+GGG | - | chr1_1:54829967-54829986 | Msa0029540:intron | 25.0% |
| ! | CTTTGTTACATTAATCAACA+AGG | + | chr1_1:54830085-54830104 | None:intergenic | 25.0% |
| TAGATCTTCGACACAAAAAT+GGG | - | chr1_1:54829076-54829095 | Msa0029540:three_prime_UTR | 30.0% | |
| !!! | TACTTTTTCTTCTCCAAATG+AGG | + | chr1_1:54829398-54829417 | None:intergenic | 30.0% |
| AAGAATACTTTACCTCAAAC+TGG | - | chr1_1:54829619-54829638 | Msa0029540:CDS | 30.0% | |
| CTCTGTTTATAGATCATTCA+AGG | - | chr1_1:54829749-54829768 | Msa0029540:intron | 30.0% | |
| TTATAGATCATTCAAGGATG+AGG | - | chr1_1:54829755-54829774 | Msa0029540:intron | 30.0% | |
| ! | TTTTCTCAGTGCTATAATAC+AGG | + | chr1_1:54829794-54829813 | None:intergenic | 30.0% |
| TTTCTGATATAAGAAGGTAG+TGG | + | chr1_1:54829872-54829891 | None:intergenic | 30.0% | |
| ACAAGGTTTCTGATATAAGA+AGG | + | chr1_1:54829878-54829897 | None:intergenic | 30.0% | |
| CAAATTCATAATAGCCCAAA+TGG | + | chr1_1:54829984-54830003 | None:intergenic | 30.0% | |
| !! | CATGATCATTGATGATGTAT+AGG | - | chr1_1:54830010-54830029 | Msa0029540:intron | 30.0% |
| ACATTAATCAACAAGGATGT+AGG | + | chr1_1:54830078-54830097 | None:intergenic | 30.0% | |
| TAGATCTTCGACACAAAAAT+GGG | - | chr1_1:54829076-54829095 | Msa0029540:three_prime_UTR | 30.0% | |
| !!! | TACTTTTTCTTCTCCAAATG+AGG | + | chr1_1:54829398-54829417 | None:intergenic | 30.0% |
| AAGAATACTTTACCTCAAAC+TGG | - | chr1_1:54829619-54829638 | Msa0029540:CDS | 30.0% | |
| CTCTGTTTATAGATCATTCA+AGG | - | chr1_1:54829749-54829768 | Msa0029540:intron | 30.0% | |
| TTATAGATCATTCAAGGATG+AGG | - | chr1_1:54829755-54829774 | Msa0029540:intron | 30.0% | |
| ! | TTTTCTCAGTGCTATAATAC+AGG | + | chr1_1:54829794-54829813 | None:intergenic | 30.0% |
| TTTCTGATATAAGAAGGTAG+TGG | + | chr1_1:54829872-54829891 | None:intergenic | 30.0% | |
| ACAAGGTTTCTGATATAAGA+AGG | + | chr1_1:54829878-54829897 | None:intergenic | 30.0% | |
| CAAATTCATAATAGCCCAAA+TGG | + | chr1_1:54829984-54830003 | None:intergenic | 30.0% | |
| !! | CATGATCATTGATGATGTAT+AGG | - | chr1_1:54830010-54830029 | Msa0029540:intron | 30.0% |
| ACATTAATCAACAAGGATGT+AGG | + | chr1_1:54830078-54830097 | None:intergenic | 30.0% | |
| CTAGATCTTCGACACAAAAA+TGG | - | chr1_1:54829075-54829094 | Msa0029540:three_prime_UTR | 35.0% | |
| TCAATGATTGATGGGACTTA+CGG | + | chr1_1:54829275-54829294 | None:intergenic | 35.0% | |
| GCAAGTTTATTACCAGTTTG+AGG | + | chr1_1:54829634-54829653 | None:intergenic | 35.0% | |
| CAACATGAAAAAGCAACAAG+AGG | + | chr1_1:54829692-54829711 | None:intergenic | 35.0% | |
| ! | TATAGCACTGAGAAAACCTT+TGG | - | chr1_1:54829798-54829817 | Msa0029540:CDS | 35.0% |
| CATTTATGTACAGGATCCAA+AGG | + | chr1_1:54829817-54829836 | None:intergenic | 35.0% | |
| CTAGATCTTCGACACAAAAA+TGG | - | chr1_1:54829075-54829094 | Msa0029540:three_prime_UTR | 35.0% | |
| TCAATGATTGATGGGACTTA+CGG | + | chr1_1:54829275-54829294 | None:intergenic | 35.0% | |
| GCAAGTTTATTACCAGTTTG+AGG | + | chr1_1:54829634-54829653 | None:intergenic | 35.0% | |
| CAACATGAAAAAGCAACAAG+AGG | + | chr1_1:54829692-54829711 | None:intergenic | 35.0% | |
| ! | TATAGCACTGAGAAAACCTT+TGG | - | chr1_1:54829798-54829817 | Msa0029540:CDS | 35.0% |
| CATTTATGTACAGGATCCAA+AGG | + | chr1_1:54829817-54829836 | None:intergenic | 35.0% | |
| ATCTTCGACACAAAAATGGG+AGG | - | chr1_1:54829079-54829098 | Msa0029540:three_prime_UTR | 40.0% | |
| TTCCAGAACGAGTTTACGTT+TGG | - | chr1_1:54829112-54829131 | Msa0029540:three_prime_UTR | 40.0% | |
| TACCAAACGTAAACTCGTTC+TGG | + | chr1_1:54829117-54829136 | None:intergenic | 40.0% | |
| ! | TTTTCGCGTGTGTAGAACAA+AGG | - | chr1_1:54829203-54829222 | Msa0029540:three_prime_UTR | 40.0% |
| AATGATTGATGGGACTTACG+GGG | + | chr1_1:54829273-54829292 | None:intergenic | 40.0% | |
| CAATGATTGATGGGACTTAC+GGG | + | chr1_1:54829274-54829293 | None:intergenic | 40.0% | |
| TCTTCTTCTTCAGGTGATTG+TGG | - | chr1_1:54829349-54829368 | Msa0029540:exon | 40.0% | |
| TCCAGACTTAATTTACCAGC+TGG | - | chr1_1:54829574-54829593 | Msa0029540:CDS | 40.0% | |
| TCCAGCTGGTAAATTAAGTC+TGG | + | chr1_1:54829578-54829597 | None:intergenic | 40.0% | |
| TGCTATTGCAGCTAGTATGA+TGG | - | chr1_1:54829725-54829744 | Msa0029540:intron | 40.0% | |
| AGATCATTCAAGGATGAGGA+TGG | - | chr1_1:54829759-54829778 | Msa0029540:intron | 40.0% | |
| ATCTTCGACACAAAAATGGG+AGG | - | chr1_1:54829079-54829098 | Msa0029540:three_prime_UTR | 40.0% | |
| TTCCAGAACGAGTTTACGTT+TGG | - | chr1_1:54829112-54829131 | Msa0029540:three_prime_UTR | 40.0% | |
| TACCAAACGTAAACTCGTTC+TGG | + | chr1_1:54829117-54829136 | None:intergenic | 40.0% | |
| ! | TTTTCGCGTGTGTAGAACAA+AGG | - | chr1_1:54829203-54829222 | Msa0029540:three_prime_UTR | 40.0% |
| AATGATTGATGGGACTTACG+GGG | + | chr1_1:54829273-54829292 | None:intergenic | 40.0% | |
| CAATGATTGATGGGACTTAC+GGG | + | chr1_1:54829274-54829293 | None:intergenic | 40.0% | |
| TCTTCTTCTTCAGGTGATTG+TGG | - | chr1_1:54829349-54829368 | Msa0029540:exon | 40.0% | |
| TCCAGACTTAATTTACCAGC+TGG | - | chr1_1:54829574-54829593 | Msa0029540:CDS | 40.0% | |
| TCCAGCTGGTAAATTAAGTC+TGG | + | chr1_1:54829578-54829597 | None:intergenic | 40.0% | |
| TGCTATTGCAGCTAGTATGA+TGG | - | chr1_1:54829725-54829744 | Msa0029540:intron | 40.0% | |
| AGATCATTCAAGGATGAGGA+TGG | - | chr1_1:54829759-54829778 | Msa0029540:intron | 40.0% | |
| TAGCAAGACAAGAGTTGCTC+TGG | + | chr1_1:54829058-54829077 | None:intergenic | 45.0% | |
| TTCGACACAAAAATGGGAGG+AGG | - | chr1_1:54829082-54829101 | Msa0029540:three_prime_UTR | 45.0% | |
| CAAATGAGGCAGATCGCATT+TGG | + | chr1_1:54829384-54829403 | None:intergenic | 45.0% | |
| CAAATGCGATCTGCCTCATT+TGG | - | chr1_1:54829382-54829401 | Msa0029540:CDS | 45.0% | |
| ! | ACAAAGAGAGCTTTTCCAGC+TGG | + | chr1_1:54829592-54829611 | None:intergenic | 45.0% |
| TAGCAAGACAAGAGTTGCTC+TGG | + | chr1_1:54829058-54829077 | None:intergenic | 45.0% | |
| TTCGACACAAAAATGGGAGG+AGG | - | chr1_1:54829082-54829101 | Msa0029540:three_prime_UTR | 45.0% | |
| CAAATGAGGCAGATCGCATT+TGG | + | chr1_1:54829384-54829403 | None:intergenic | 45.0% | |
| CAAATGCGATCTGCCTCATT+TGG | - | chr1_1:54829382-54829401 | Msa0029540:CDS | 45.0% | |
| ! | ACAAAGAGAGCTTTTCCAGC+TGG | + | chr1_1:54829592-54829611 | None:intergenic | 45.0% |
| !! | ATAAGATAAAATTATTAAAA+AGG | + | chr1_1:54829155-54829174 | None:intergenic | 5.0% |
| !! | ATAAGATAAAATTATTAAAA+AGG | + | chr1_1:54829155-54829174 | None:intergenic | 5.0% |
| GTTCCACGAGACTTGTCAGT+TGG | - | chr1_1:54829529-54829548 | Msa0029540:intron | 50.0% | |
| TGTCCAACTGACAAGTCTCG+TGG | + | chr1_1:54829535-54829554 | None:intergenic | 50.0% | |
| GTTCCACGAGACTTGTCAGT+TGG | - | chr1_1:54829529-54829548 | Msa0029540:intron | 50.0% | |
| TGTCCAACTGACAAGTCTCG+TGG | + | chr1_1:54829535-54829554 | None:intergenic | 50.0% | |
| ! | GGGGATTCGATCGGGGTATT+TGG | + | chr1_1:54829254-54829273 | None:intergenic | 55.0% |
| GACTTACGGGGATTCGATCG+GGG | + | chr1_1:54829261-54829280 | None:intergenic | 55.0% | |
| GGACTTACGGGGATTCGATC+GGG | + | chr1_1:54829262-54829281 | None:intergenic | 55.0% | |
| GGGACTTACGGGGATTCGAT+CGG | + | chr1_1:54829263-54829282 | None:intergenic | 55.0% | |
| ! | GGGGATTCGATCGGGGTATT+TGG | + | chr1_1:54829254-54829273 | None:intergenic | 55.0% |
| GACTTACGGGGATTCGATCG+GGG | + | chr1_1:54829261-54829280 | None:intergenic | 55.0% | |
| GGACTTACGGGGATTCGATC+GGG | + | chr1_1:54829262-54829281 | None:intergenic | 55.0% | |
| GGGACTTACGGGGATTCGAT+CGG | + | chr1_1:54829263-54829282 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 54829017 | 54830169 | 54829017 | ID=Msa0029540;Name=Msa0029540 |
| chr1_1 | mRNA | 54829017 | 54830169 | 54829017 | ID=Msa0029540-mRNA-1;Parent=Msa0029540;Name=Msa0029540-mRNA-1;_AED=0.13;_eAED=0.13;_QI=77|1|1|1|1|1|5|336|121 |
| chr1_1 | exon | 54829017 | 54829450 | 54829017 | ID=Msa0029540-mRNA-1:exon:16394;Parent=Msa0029540-mRNA-1 |
| chr1_1 | exon | 54829546 | 54829664 | 54829546 | ID=Msa0029540-mRNA-1:exon:16393;Parent=Msa0029540-mRNA-1 |
| chr1_1 | exon | 54829772 | 54829824 | 54829772 | ID=Msa0029540-mRNA-1:exon:16392;Parent=Msa0029540-mRNA-1 |
| chr1_1 | exon | 54829913 | 54829968 | 54829913 | ID=Msa0029540-mRNA-1:exon:16391;Parent=Msa0029540-mRNA-1 |
| chr1_1 | exon | 54830053 | 54830169 | 54830053 | ID=Msa0029540-mRNA-1:exon:16390;Parent=Msa0029540-mRNA-1 |
| chr1_1 | five_prime_UTR | 54830093 | 54830169 | 54830093 | ID=Msa0029540-mRNA-1:five_prime_utr;Parent=Msa0029540-mRNA-1 |
| chr1_1 | CDS | 54830053 | 54830092 | 54830053 | ID=Msa0029540-mRNA-1:cds;Parent=Msa0029540-mRNA-1 |
| chr1_1 | CDS | 54829913 | 54829968 | 54829913 | ID=Msa0029540-mRNA-1:cds;Parent=Msa0029540-mRNA-1 |
| chr1_1 | CDS | 54829772 | 54829824 | 54829772 | ID=Msa0029540-mRNA-1:cds;Parent=Msa0029540-mRNA-1 |
| chr1_1 | CDS | 54829546 | 54829664 | 54829546 | ID=Msa0029540-mRNA-1:cds;Parent=Msa0029540-mRNA-1 |
| chr1_1 | CDS | 54829353 | 54829450 | 54829353 | ID=Msa0029540-mRNA-1:cds;Parent=Msa0029540-mRNA-1 |
| chr1_1 | three_prime_UTR | 54829017 | 54829352 | 54829017 | ID=Msa0029540-mRNA-1:three_prime_utr;Parent=Msa0029540-mRNA-1 |
| Gene Sequence |
| Protein sequence |
