Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1231930 | AET01536.2 | 92.917 | 593 | 27 | 1 | 1 | 593 | 1 | 578 | 0.0 | 1101 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1231930 | sp|P37572|RADA_BACSU | 41.582 | 493 | 243 | 9 | 78 | 566 | 3 | 454 | 2.20e-114 | 352 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1231930 | G7LGQ6 | 92.917 | 593 | 27 | 1 | 1 | 593 | 1 | 578 | 0.0 | 1101 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0021810 | Msa1231930 | 0.802070 | 6.680445e-49 | -8.615850e-47 |
| Msa0032840 | Msa1231930 | -0.802987 | 4.321560e-49 | -8.615850e-47 |
| Msa0096670 | Msa1231930 | 0.802134 | 6.479826e-49 | -8.615850e-47 |
| Msa0114540 | Msa1231930 | -0.828407 | 9.144969e-55 | -8.615850e-47 |
| Msa0647130 | Msa1231930 | 0.803383 | 3.578269e-49 | -8.615850e-47 |
| Msa0648520 | Msa1231930 | 0.834618 | 2.700714e-56 | -8.615850e-47 |
| Msa0670980 | Msa1231930 | 0.808722 | 2.693640e-50 | -8.615850e-47 |
| Msa0691050 | Msa1231930 | 0.806806 | 6.878256e-50 | -8.615850e-47 |
| Msa0741900 | Msa1231930 | 0.803943 | 2.739171e-49 | -8.615850e-47 |
| Msa0743680 | Msa1231930 | 0.818210 | 2.207856e-52 | -8.615850e-47 |
| Msa0754720 | Msa1231930 | -0.812735 | 3.651076e-51 | -8.615850e-47 |
| Msa0756630 | Msa1231930 | -0.808001 | 3.836976e-50 | -8.615850e-47 |
| Msa0784620 | Msa1231930 | 0.810871 | 9.292216e-51 | -8.615850e-47 |
| Msa0795390 | Msa1231930 | 0.800560 | 1.361144e-48 | -8.615850e-47 |
| Msa0822990 | Msa1231930 | 0.806464 | 8.121978e-50 | -8.615850e-47 |
| Msa0824730 | Msa1231930 | 0.807024 | 6.185860e-50 | -8.615850e-47 |
| Msa0829620 | Msa1231930 | 0.805169 | 1.519885e-49 | -8.615850e-47 |
| Msa0123100 | Msa1231930 | 0.801370 | 9.297926e-49 | -8.615850e-47 |
| Msa0124340 | Msa1231930 | 0.801051 | 1.080577e-48 | -8.615850e-47 |
| Msa0142470 | Msa1231930 | 0.821791 | 3.345494e-53 | -8.615850e-47 |
| Msa0145980 | Msa1231930 | -0.806741 | 7.100958e-50 | -8.615850e-47 |
| Msa0185590 | Msa1231930 | 0.800010 | 1.761032e-48 | -8.615850e-47 |
| Msa0193890 | Msa1231930 | 0.807044 | 6.125416e-50 | -8.615850e-47 |
| Msa0199710 | Msa1231930 | 0.804592 | 2.006210e-49 | -8.615850e-47 |
| Msa0222920 | Msa1231930 | 0.813196 | 2.893201e-51 | -8.615850e-47 |
| Msa1228890 | Msa1231930 | 0.800792 | 1.220647e-48 | -8.615850e-47 |
| Msa1231930 | Msa1237030 | 0.805790 | 1.126147e-49 | -8.615850e-47 |
| Msa1231930 | Msa1274060 | 0.803305 | 3.715114e-49 | -8.615850e-47 |
| Msa1231930 | Msa1274280 | 0.809646 | 1.706928e-50 | -8.615850e-47 |
| Msa1231930 | Msa1337730 | 0.808233 | 3.424793e-50 | -8.615850e-47 |
| Msa1231930 | Msa1362510 | 0.812166 | 4.861435e-51 | -8.615850e-47 |
| Msa1231930 | Msa1364470 | -0.800028 | 1.746047e-48 | -8.615850e-47 |
| Msa1231930 | Msa1398860 | 0.803452 | 3.462919e-49 | -8.615850e-47 |
| Msa1231930 | Msa1459180 | 0.811079 | 8.375614e-51 | -8.615850e-47 |
| Msa1231930 | Msa1459390 | 0.813770 | 2.163476e-51 | -8.615850e-47 |
| Msa0369570 | Msa1231930 | 0.805516 | 1.285353e-49 | -8.615850e-47 |
| Msa0469910 | Msa1231930 | -0.805900 | 1.067470e-49 | -8.615850e-47 |
| Msa0480320 | Msa1231930 | 0.809383 | 1.944138e-50 | -8.615850e-47 |
| Msa0986920 | Msa1231930 | 0.806577 | 7.689210e-50 | -8.615850e-47 |
| Msa0993530 | Msa1231930 | 0.814989 | 1.162975e-51 | -8.615850e-47 |
| Msa0996080 | Msa1231930 | 0.803122 | 4.052959e-49 | -8.615850e-47 |
| Msa1046300 | Msa1231930 | 0.820032 | 8.499570e-53 | -8.615850e-47 |
| Msa1101580 | Msa1231930 | 0.801817 | 7.529025e-49 | -8.615850e-47 |
| Msa0264350 | Msa1231930 | 0.811703 | 6.130764e-51 | -8.615850e-47 |
| Msa0315240 | Msa1231930 | 0.812763 | 3.599480e-51 | -8.615850e-47 |
| Msa0334040 | Msa1231930 | 0.805950 | 1.042129e-49 | -8.615850e-47 |
| Msa0335040 | Msa1231930 | 0.805329 | 1.406974e-49 | -8.615850e-47 |
| Msa0356890 | Msa1231930 | -0.813955 | 1.969222e-51 | -8.615850e-47 |
| Msa1127830 | Msa1231930 | 0.809532 | 1.806497e-50 | -8.615850e-47 |
| Msa1143620 | Msa1231930 | 0.823082 | 1.677268e-53 | -8.615850e-47 |
| Msa1185540 | Msa1231930 | 0.801109 | 1.051337e-48 | -8.615850e-47 |
| Msa0521880 | Msa1231930 | 0.835677 | 1.459578e-56 | -8.615850e-47 |
| Msa0526890 | Msa1231930 | 0.813027 | 3.150683e-51 | -8.615850e-47 |
| Msa0574890 | Msa1231930 | 0.806660 | 7.383941e-50 | -8.615850e-47 |
| Msa0863370 | Msa1231930 | 0.800142 | 1.655806e-48 | -8.615850e-47 |
| Msa0863800 | Msa1231930 | 0.832970 | 6.976434e-56 | -8.615850e-47 |
| Msa0930780 | Msa1231930 | 0.829342 | 5.431968e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1231930 | MtrunA17_Chr8g0340841 | 93.056 | 576 | 25 | 1 | 1 | 576 | 1 | 561 | 0.0 | 1070 |
| Msa1231930 | MtrunA17_Chr2g0330801 | 69.094 | 508 | 130 | 4 | 73 | 568 | 111 | 603 | 0.0 | 696 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1231930 | AT5G50340.3 | 59.307 | 548 | 199 | 6 | 28 | 568 | 95 | 625 | 0.0 | 641 |
| Msa1231930 | AT5G50340.1 | 59.307 | 548 | 199 | 6 | 28 | 568 | 95 | 625 | 0.0 | 641 |
| Msa1231930 | AT5G50340.2 | 59.307 | 548 | 199 | 6 | 28 | 568 | 55 | 585 | 0.0 | 640 |
Find 130 sgRNAs with CRISPR-Local
Find 469 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTAGATCTTGTAGTGTTTC+TGG | 0.148562 | 8_2:-8207253 | Msa1231930:CDS |
| AACATTTCTTATTGAAATTC+AGG | 0.199096 | 8_2:-8203020 | Msa1231930:intron |
| TGAGATTGTCTGAGGTTAAT+AGG | 0.207867 | 8_2:-8207117 | Msa1231930:CDS |
| GGTACACACAGTGGCGAAAT+TGG | 0.208362 | 8_2:-8200005 | Msa1231930:CDS |
| AATGATGAAGGTGTTGTATT+TGG | 0.212340 | 8_2:-8207358 | Msa1231930:CDS |
| TGGATGATGGGTTGGGGTCT+TGG | 0.212450 | 8_2:-8207171 | Msa1231930:CDS |
| TAAAACATCTTACATGTTCT+TGG | 0.218674 | 8_2:+8202337 | None:intergenic |
| GATTTCAGGTCTGGTCCTTT+TGG | 0.232200 | 8_2:-8206366 | Msa1231930:intron |
| ATTGCATTCATAGGTGAAAT+TGG | 0.236148 | 8_2:-8200618 | Msa1231930:CDS |
| TTGTTGTTGGTGATGGGTTA+TGG | 0.285491 | 8_2:+8207497 | None:intergenic |
| ACAGGATCAAGGCAATTTAA+TGG | 0.295845 | 8_2:-8202545 | Msa1231930:CDS |
| ATTTGGAAGAAAGAAGAAAA+AGG | 0.297814 | 8_2:-8207341 | Msa1231930:CDS |
| TCTCTCTACCATGCTGTATA+TGG | 0.300321 | 8_2:-8199573 | Msa1231930:CDS |
| TGGGTTGGGGTCTTGGCTTC+CGG | 0.301477 | 8_2:-8207164 | Msa1231930:CDS |
| GAGATTGTCTGAGGTTAATA+GGG | 0.312923 | 8_2:-8207116 | Msa1231930:CDS |
| CCAAATGATATTGCATTCAT+AGG | 0.313660 | 8_2:-8200627 | Msa1231930:CDS |
| GCAGATTATAAGAGAGATTC+TGG | 0.314918 | 8_2:+8199600 | None:intergenic |
| TCGGTTATGGATGATGGGTT+GGG | 0.320680 | 8_2:-8207178 | Msa1231930:CDS |
| CCTTCATCATTACCCTCAAT+TGG | 0.324522 | 8_2:+8207370 | None:intergenic |
| ATATCAAAGTTGTTGGTTGC+AGG | 0.333948 | 8_2:-8199919 | Msa1231930:CDS |
| TGCAAGATCTCCTGCAGTTT+CGG | 0.337705 | 8_2:+8201447 | None:intergenic |
| GAAGAGTACTCTGTTGTTGC+AGG | 0.337955 | 8_2:-8205595 | Msa1231930:intron |
| AACAAACATCCCGGTTCTAT+TGG | 0.352005 | 8_2:-8204532 | Msa1231930:intron |
| CCTATGAATGCAATATCATT+TGG | 0.353885 | 8_2:+8200627 | None:intergenic |
| TCGTAGGCGCTTTGTCTCTC+TGG | 0.371535 | 8_2:-8202572 | Msa1231930:intron |
| TTCGGTTATGGATGATGGGT+TGG | 0.374519 | 8_2:-8207179 | Msa1231930:CDS |
| ATTGGACATGTGACAAAATC+TGG | 0.374703 | 8_2:-8204268 | Msa1231930:CDS |
| TAGCAGCTGCAATTTGCAGC+AGG | 0.379890 | 8_2:-8201423 | Msa1231930:intron |
| CTTTGTCTCTCTGGTTCAAC+AGG | 0.382037 | 8_2:-8202563 | Msa1231930:CDS |
| GAAGGTTCATTGACTTTAGT+TGG | 0.383185 | 8_2:-8205636 | Msa1231930:intron |
| GATGTCACATTCAGGACTTC+AGG | 0.386674 | 8_2:-8203140 | Msa1231930:CDS |
| CAGCTAAAACATCTGAATCT+AGG | 0.387183 | 8_2:+8203077 | None:intergenic |
| ACTTTAGTTGGCGGGGATCC+TGG | 0.387235 | 8_2:-8205624 | Msa1231930:CDS |
| AATTTCAATAAGAAATGTTC+GGG | 0.388189 | 8_2:+8203024 | None:intergenic |
| CATTTGTGTTATGTTTGTTA+TGG | 0.388968 | 8_2:+8207567 | None:intergenic |
| GAATTTCAATAAGAAATGTT+CGG | 0.397085 | 8_2:+8203023 | None:intergenic |
| TTCGTGGCCTTCGGCGAGTA+TGG | 0.401302 | 8_2:+8205442 | None:intergenic |
| TTAGAAAATATCAAAGTTGT+TGG | 0.403745 | 8_2:-8199926 | Msa1231930:CDS |
| ACTGGGTTTGTAGCAATTGT+GGG | 0.404318 | 8_2:-8207303 | Msa1231930:CDS |
| CTTGGTGGTGGTCTTGTACC+AGG | 0.411423 | 8_2:-8206324 | Msa1231930:intron |
| AAATATCTGATCCAATTGTT+AGG | 0.420436 | 8_2:+8205206 | None:intergenic |
| TTGGCGGGGATCCTGGTGTT+GGG | 0.421471 | 8_2:-8205617 | Msa1231930:CDS |
| TGGGAGAAGATGAAGCGTTT+TGG | 0.425175 | 8_2:+8207446 | None:intergenic |
| AATATGCTCACCAATAGAAC+CGG | 0.429568 | 8_2:+8204522 | None:intergenic |
| GTTGGCGGGGATCCTGGTGT+TGG | 0.436178 | 8_2:-8205618 | Msa1231930:CDS |
| GCTGCGTTTGTTGTTGGTGA+TGG | 0.439178 | 8_2:+8207490 | None:intergenic |
| AGAGCAGACCGCCTAACAAT+TGG | 0.441533 | 8_2:-8205217 | Msa1231930:CDS |
| TACTGGGTTTGTAGCAATTG+TGG | 0.444634 | 8_2:-8207304 | Msa1231930:CDS |
| TTCACCATCTTCGTGGCCTT+CGG | 0.448098 | 8_2:+8205433 | None:intergenic |
| ACTCGCTGTAGCTGTAATAA+TGG | 0.450275 | 8_2:-8203053 | Msa1231930:CDS |
| AAAAGTAGTGATAAGGTAAG+TGG | 0.450295 | 8_2:-8207205 | Msa1231930:CDS |
| AATGCAATATCATTTGGAAT+CGG | 0.457468 | 8_2:+8200633 | None:intergenic |
| TCTCCAGTTGTGTATGTCTC+TGG | 0.459449 | 8_2:-8205407 | Msa1231930:CDS |
| GTACAAACTGTTTATTTGAA+AGG | 0.459630 | 8_2:-8204949 | Msa1231930:CDS |
| TGGAAAGCTGCGTTTGTTGT+TGG | 0.461637 | 8_2:+8207484 | None:intergenic |
| CTTCATCATTACCCTCAATT+GGG | 0.461985 | 8_2:+8207371 | None:intergenic |
| CGGTTATGGATGATGGGTTG+GGG | 0.465646 | 8_2:-8207177 | Msa1231930:CDS |
| TCATATCGGCTCTATTTGCT+TGG | 0.468210 | 8_2:+8202519 | None:intergenic |
| GTACACACAGTGGCGAAATT+GGG | 0.468293 | 8_2:-8200004 | Msa1231930:CDS |
| CGCAACTCGCCACTCTTCTC+CGG | 0.468772 | 8_2:+8207145 | None:intergenic |
| CTAGAAACTTCATTTCCAAA+AGG | 0.471348 | 8_2:+8206351 | None:intergenic |
| TTTGGTGTGGTGGGTTGGTG+TGG | 0.480382 | 8_2:+8207464 | None:intergenic |
| CATAGCAGGACCTCGTGTCT+TGG | 0.486847 | 8_2:-8204242 | Msa1231930:CDS |
| TGAAGTGAAAAGTAGTGATA+AGG | 0.486910 | 8_2:-8207212 | Msa1231930:CDS |
| GTTTCTAGAGTGCTTGGTGG+TGG | 0.488724 | 8_2:-8206336 | Msa1231930:CDS |
| AGCAATTGTGGGTATAGTAC+TGG | 0.489188 | 8_2:-8207292 | Msa1231930:CDS |
| TGACAGAGTGTTGAGCAAAT+TGG | 0.490269 | 8_2:-8205244 | Msa1231930:intron |
| TTTATTTGAAAGGAATAATG+AGG | 0.491539 | 8_2:-8204939 | Msa1231930:CDS |
| TCACCAGAGACATACACAAC+TGG | 0.498987 | 8_2:+8205404 | None:intergenic |
| TTCATAGGTGAAATTGGTCT+TGG | 0.502802 | 8_2:-8200612 | Msa1231930:CDS |
| ACTCACAGATATGATCATAT+CGG | 0.504034 | 8_2:+8202505 | None:intergenic |
| ATGCAATATCATTTGGAATC+GGG | 0.506149 | 8_2:+8200634 | None:intergenic |
| GGGGAGTTGATCATTTGCAT+TGG | 0.507922 | 8_2:-8207096 | Msa1231930:CDS |
| GATGTTACAGGTTACTAGAA+TGG | 0.508458 | 8_2:-8200035 | Msa1231930:intron |
| GTTCATTGACTTTAGTTGGC+GGG | 0.513328 | 8_2:-8205632 | Msa1231930:CDS |
| CTGCGTTTGTTGTTGGTGAT+GGG | 0.514262 | 8_2:+8207491 | None:intergenic |
| ATAGGTGAAATTGGTCTTGG+TGG | 0.515119 | 8_2:-8200609 | Msa1231930:CDS |
| AGCAGAGTAAACCCAATTGA+GGG | 0.515872 | 8_2:-8207382 | Msa1231930:CDS |
| AAAGGAATAATGAGGAGTCC+TGG | 0.516606 | 8_2:-8204931 | Msa1231930:CDS |
| AGTGACAATGATTGTGTTGA+AGG | 0.520288 | 8_2:+8207520 | None:intergenic |
| TAGCAGAGTAAACCCAATTG+AGG | 0.525056 | 8_2:-8207383 | Msa1231930:CDS |
| TCTCTGGTTCAACAGGATCA+AGG | 0.527053 | 8_2:-8202556 | Msa1231930:CDS |
| CTCACTAAGAAACATTTCAC+TGG | 0.528014 | 8_2:+8203105 | None:intergenic |
| GTATAGTACTGGACAATGGT+GGG | 0.532179 | 8_2:-8207281 | Msa1231930:CDS |
| GAGATGCTTCACCATCTTCG+TGG | 0.533205 | 8_2:+8205426 | None:intergenic |
| CCAATTGAGGGTAATGATGA+AGG | 0.533787 | 8_2:-8207370 | Msa1231930:CDS |
| CTCACCTGCATAATCCCTCC+AGG | 0.539190 | 8_2:+8204913 | None:intergenic |
| TTCATTGACTTTAGTTGGCG+GGG | 0.542678 | 8_2:-8205631 | Msa1231930:CDS |
| GGTATAGTACTGGACAATGG+TGG | 0.554733 | 8_2:-8207282 | Msa1231930:CDS |
| TTGCTTCTTCTCATCACACT+AGG | 0.554766 | 8_2:+8199866 | None:intergenic |
| AGATTGTCTGAGGTTAATAG+GGG | 0.555911 | 8_2:-8207115 | Msa1231930:CDS |
| CTCGCCGAAGGCCACGAAGA+TGG | 0.557369 | 8_2:-8205437 | Msa1231930:CDS |
| GCTGTAGCTGTAATAATGGA+TGG | 0.562135 | 8_2:-8203049 | Msa1231930:CDS |
| TCTTGGTGGCGAGCTTCGCA+TGG | 0.568250 | 8_2:-8200595 | Msa1231930:intron |
| AATGAAGTTTCTAGAGTGCT+TGG | 0.574087 | 8_2:-8206342 | Msa1231930:CDS |
| TGCAAAGACAACAAACATCC+CGG | 0.575808 | 8_2:-8204541 | Msa1231930:CDS |
| GCGTCCTTTGAGATTGTCTG+AGG | 0.576352 | 8_2:-8207125 | Msa1231930:CDS |
| TTGTTCTTACTCTGAAAACA+TGG | 0.576537 | 8_2:+8203654 | None:intergenic |
| ACAAAATCTGGAGACATAGC+AGG | 0.580533 | 8_2:-8204256 | Msa1231930:CDS |
| CAGAATGTGTATAGTACCAA+AGG | 0.580803 | 8_2:-8199978 | Msa1231930:CDS |
| TTGACAGTGACCGAAACTGC+AGG | 0.582537 | 8_2:-8201457 | Msa1231930:CDS |
| CACAGCTCGAAGCATACGAT+GGG | 0.590867 | 8_2:+8203294 | None:intergenic |
| AGTTCAGTATATCTCCCCTC+GGG | 0.592618 | 8_2:-8204989 | Msa1231930:CDS |
| TGTGTATGTCTCTGGTGAAG+AGG | 0.594608 | 8_2:-8205399 | Msa1231930:intron |
| AAGTTCAGTATATCTCCCCT+CGG | 0.596535 | 8_2:-8204990 | Msa1231930:CDS |
| GGTTCATTGACTTTAGTTGG+CGG | 0.596632 | 8_2:-8205633 | Msa1231930:CDS |
| AGAGTACTCTTCCCAACACC+AGG | 0.598012 | 8_2:+8205606 | None:intergenic |
| TAGGTTCTTATCAAGCAAGC+AGG | 0.605238 | 8_2:-8202369 | Msa1231930:CDS |
| GAGTCCTGGAGGGATTATGC+AGG | 0.607708 | 8_2:-8204917 | Msa1231930:intron |
| TCTTGGCTTCCGGAGAAGAG+TGG | 0.607727 | 8_2:-8207154 | Msa1231930:CDS |
| TATAGTACTGGACAATGGTG+GGG | 0.608013 | 8_2:-8207280 | Msa1231930:CDS |
| TCACAGCTCGAAGCATACGA+TGG | 0.610220 | 8_2:+8203293 | None:intergenic |
| ATATTCAAGTACTGATATCG+AGG | 0.619389 | 8_2:-8205179 | Msa1231930:intron |
| ATTGTAGCATACCTCATCAG+TGG | 0.623344 | 8_2:+8203255 | None:intergenic |
| GGAATAATGAGGAGTCCTGG+AGG | 0.625850 | 8_2:-8204928 | Msa1231930:CDS |
| GTGACAATGATTGTGTTGAA+GGG | 0.638970 | 8_2:+8207521 | None:intergenic |
| TGATTCTTCCATATACAGCA+TGG | 0.640595 | 8_2:+8199565 | None:intergenic |
| TTAACCTCAGACAATCTCAA+AGG | 0.643622 | 8_2:+8207121 | None:intergenic |
| GAAGTTTCTAGAGTGCTTGG+TGG | 0.646743 | 8_2:-8206339 | Msa1231930:CDS |
| AATCAACAACTAGTGCCCGA+GGG | 0.649411 | 8_2:+8204974 | None:intergenic |
| GAATCAACAACTAGTGCCCG+AGG | 0.649815 | 8_2:+8204973 | None:intergenic |
| GAATAATGAGGAGTCCTGGA+GGG | 0.650739 | 8_2:-8204927 | Msa1231930:CDS |
| ATATGCTCACCAATAGAACC+GGG | 0.656121 | 8_2:+8204523 | None:intergenic |
| TCGATTTGGATCCACTGATG+AGG | 0.657073 | 8_2:-8203266 | Msa1231930:intron |
| ATTGCTTCCATACTCGCCGA+AGG | 0.657218 | 8_2:-8205449 | Msa1231930:CDS |
| TATCTGATCCAATTGTTAGG+CGG | 0.678965 | 8_2:+8205209 | None:intergenic |
| ATCAACAACTAGTGCCCGAG+GGG | 0.683816 | 8_2:+8204975 | None:intergenic |
| TTGTGTTGAAGGGAAACGAG+AGG | 0.703585 | 8_2:+8207531 | None:intergenic |
| ACGATATGCTCCAAGACACG+AGG | 0.716833 | 8_2:+8204232 | None:intergenic |
| GTGGGTATAGTACTGGACAA+TGG | 0.731319 | 8_2:-8207285 | Msa1231930:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATTTAAAAAATATAAAT+AGG | + | chr8_2:8202678-8202697 | None:intergenic | 0.0% |
| !! | TATTAATATAGATAAGAAAA+TGG | + | chr8_2:8200857-8200876 | None:intergenic | 10.0% |
| !!! | GTAACTTTATTTATTATTTT+GGG | - | chr8_2:8201487-8201506 | Msa1231930:CDS | 10.0% |
| !!! | AATTATTTAGTTATTTTGTA+TGG | - | chr8_2:8201581-8201600 | Msa1231930:intron | 10.0% |
| !!! | CTAAATTATAGTTTTTTTTA+TGG | - | chr8_2:8202117-8202136 | Msa1231930:intron | 10.0% |
| !!! | TTTTTTTACATTAAAATACT+TGG | - | chr8_2:8203642-8203661 | Msa1231930:intron | 10.0% |
| !!! | ATAAATGATGTATTTTTATA+CGG | - | chr8_2:8205167-8205186 | Msa1231930:intron | 10.0% |
| !! | TTATGATATTCATTATTTAA+AGG | - | chr8_2:8206609-8206628 | Msa1231930:intron | 10.0% |
| !! | ACACATTTAAAAATTTAAAA+AGG | + | chr8_2:8207352-8207371 | None:intergenic | 10.0% |
| !!! | TGTTCTAACAATTTTATTAT+TGG | - | chr8_2:8200630-8200649 | Msa1231930:CDS | 15.0% |
| !!! | GTTCTAACAATTTTATTATT+GGG | - | chr8_2:8200631-8200650 | Msa1231930:CDS | 15.0% |
| !! | TAAATTGTGTTTAGATATTA+TGG | - | chr8_2:8200706-8200725 | Msa1231930:intron | 15.0% |
| !! | AGTATACAGTATAAAAATTA+AGG | + | chr8_2:8200756-8200775 | None:intergenic | 15.0% |
| !!! | TAATTTTTATACTGTATACT+TGG | - | chr8_2:8200756-8200775 | Msa1231930:intron | 15.0% |
| !!! | CATTAAAATGAGTTTAATTT+TGG | + | chr8_2:8201388-8201407 | None:intergenic | 15.0% |
| !!! | GGTAACTTTATTTATTATTT+TGG | - | chr8_2:8201486-8201505 | Msa1231930:CDS | 15.0% |
| !! | TGAATTCCATTATAAATAAA+GGG | + | chr8_2:8203059-8203078 | None:intergenic | 15.0% |
| !! | TTGAATTCCATTATAAATAA+AGG | + | chr8_2:8203060-8203079 | None:intergenic | 15.0% |
| !! | TAGAAATAGAAATATTGTAT+TGG | + | chr8_2:8203131-8203150 | None:intergenic | 15.0% |
| !! | TATTTATTTAGAAATGTAAC+TGG | + | chr8_2:8203221-8203240 | None:intergenic | 15.0% |
| !! | TTACTATGAAAATAAATTGT+GGG | + | chr8_2:8203414-8203433 | None:intergenic | 15.0% |
| !! | TTTACTATGAAAATAAATTG+TGG | + | chr8_2:8203415-8203434 | None:intergenic | 15.0% |
| !!! | TGTAAAACTAATTTTGAAAA+TGG | + | chr8_2:8203697-8203716 | None:intergenic | 15.0% |
| !!! | ATGTCTTTTAAATTAAAATC+TGG | - | chr8_2:8203717-8203736 | Msa1231930:intron | 15.0% |
| !!! | ATATCTTTATTTTCTTAGAA+TGG | + | chr8_2:8204311-8204330 | None:intergenic | 15.0% |
| !!! | TAAATTTGATTTATCCTTTT+TGG | - | chr8_2:8204835-8204854 | Msa1231930:intron | 15.0% |
| !!! | TTTTCTCTATAAAAGTTATT+TGG | - | chr8_2:8205046-8205065 | Msa1231930:intron | 15.0% |
| !!! | CTTTAAAGTTCTTATTATTA+GGG | + | chr8_2:8206391-8206410 | None:intergenic | 15.0% |
| !!! | ACTTTAAAGTTCTTATTATT+AGG | + | chr8_2:8206392-8206411 | None:intergenic | 15.0% |
| !!! | AATAATAAGAACTTTAAAGT+TGG | - | chr8_2:8206392-8206411 | Msa1231930:intron | 15.0% |
| !! | AGTTAAATCATGAATTATAA+TGG | + | chr8_2:8207049-8207068 | None:intergenic | 15.0% |
| !!! | TTTGATTTGTATATTACTTC+TGG | - | chr8_2:8201136-8201155 | Msa1231930:intron | 20.0% |
| !!! | CTTTAAAATATTAGGATCAT+GGG | + | chr8_2:8201200-8201219 | None:intergenic | 20.0% |
| !!! | TCTTTAAAATATTAGGATCA+TGG | + | chr8_2:8201201-8201220 | None:intergenic | 20.0% |
| !!! | TAGCGTAATTTTTTTTTACA+CGG | + | chr8_2:8201357-8201376 | None:intergenic | 20.0% |
| !! | GTAAAAAAAAATTACGCTAA+CGG | - | chr8_2:8201358-8201377 | Msa1231930:intron | 20.0% |
| !!! | ATTTATTATTTTGGGTTTGA+AGG | - | chr8_2:8201495-8201514 | Msa1231930:intron | 20.0% |
| !! | AAATAAAGCAAGTATTAATG+GGG | + | chr8_2:8201660-8201679 | None:intergenic | 20.0% |
| !! | CAAATAAAGCAAGTATTAAT+GGG | + | chr8_2:8201661-8201680 | None:intergenic | 20.0% |
| !! | ACAAATAAAGCAAGTATTAA+TGG | + | chr8_2:8201662-8201681 | None:intergenic | 20.0% |
| !!! | TTTGATTTACATGTGTTATT+TGG | - | chr8_2:8201818-8201837 | Msa1231930:intron | 20.0% |
| !!! | TTGATTTACATGTGTTATTT+GGG | - | chr8_2:8201819-8201838 | Msa1231930:intron | 20.0% |
| !! | ATGTAAAGAAGTAATAATGT+AGG | + | chr8_2:8202007-8202026 | None:intergenic | 20.0% |
| !! | TTTATTTGAAAGGAATAATG+AGG | - | chr8_2:8202210-8202229 | Msa1231930:intron | 20.0% |
| !! | TTTACTGTTATTGAAAATGT+TGG | - | chr8_2:8202694-8202713 | Msa1231930:intron | 20.0% |
| !!! | CTATGTGTATTTCTTTAAAA+TGG | - | chr8_2:8202816-8202835 | Msa1231930:intron | 20.0% |
| !!! | ATTTTTTCTTTATCACAGAT+TGG | - | chr8_2:8202863-8202882 | Msa1231930:intron | 20.0% |
| !!! | TTTTACCCCTTTATTTATAA+TGG | - | chr8_2:8203050-8203069 | Msa1231930:CDS | 20.0% |
| !! | GAATTCCATTATAAATAAAG+GGG | + | chr8_2:8203058-8203077 | None:intergenic | 20.0% |
| !! | GAGCACTTATATTATATATA+GGG | + | chr8_2:8203193-8203212 | None:intergenic | 20.0% |
| !!! | AGAGCACTTATATTATATAT+AGG | + | chr8_2:8203194-8203213 | None:intergenic | 20.0% |
| !! | ATCTATTCTCTTTCAAAAAT+CGG | + | chr8_2:8203325-8203344 | None:intergenic | 20.0% |
| !!! | ACTAATTTTGAAAATGGAAT+GGG | + | chr8_2:8203691-8203710 | None:intergenic | 20.0% |
| !!! | AACTAATTTTGAAAATGGAA+TGG | + | chr8_2:8203692-8203711 | None:intergenic | 20.0% |
| !! | ATAAGTGAAAAATAAATGCA+AGG | + | chr8_2:8203760-8203779 | None:intergenic | 20.0% |
| !! | AATTTCAATAAGAAATGTTC+GGG | + | chr8_2:8204128-8204147 | None:intergenic | 20.0% |
| !! | GAATTTCAATAAGAAATGTT+CGG | + | chr8_2:8204129-8204148 | None:intergenic | 20.0% |
| !! | AACATTTCTTATTGAAATTC+AGG | - | chr8_2:8204129-8204148 | Msa1231930:intron | 20.0% |
| !! | CAATATAGTATCAATAAGAA+GGG | + | chr8_2:8204263-8204282 | None:intergenic | 20.0% |
| !! | TCAATATAGTATCAATAAGA+AGG | + | chr8_2:8204264-8204283 | None:intergenic | 20.0% |
| !!! | ATTTTAGCTGATATGAAATA+TGG | + | chr8_2:8204713-8204732 | None:intergenic | 20.0% |
| !! | ACAAAAATAACAAACCAAAA+AGG | + | chr8_2:8204852-8204871 | None:intergenic | 20.0% |
| !! | TCCAACTTTATCTATTTATT+CGG | + | chr8_2:8204969-8204988 | None:intergenic | 20.0% |
| !! | TAAAGTTGGAAATATAACTA+AGG | - | chr8_2:8204979-8204998 | Msa1231930:CDS | 20.0% |
| !! | ACAATATATAAATACGTTGT+TGG | + | chr8_2:8205088-8205107 | None:intergenic | 20.0% |
| !! | GAATTAATAATATTCACATC+TGG | - | chr8_2:8205426-8205445 | Msa1231930:CDS | 20.0% |
| !! | AACATGAAAAAAATATTTGC+TGG | + | chr8_2:8205597-8205616 | None:intergenic | 20.0% |
| !!! | TACTAGTTGAATACTATTTT+AGG | - | chr8_2:8205913-8205932 | Msa1231930:intron | 20.0% |
| !!! | ATCTTTTTGAAATCTTGATA+TGG | - | chr8_2:8205948-8205967 | Msa1231930:intron | 20.0% |
| !!! | TATAGACTCTAATTTGTTAA+AGG | - | chr8_2:8206432-8206451 | Msa1231930:intron | 20.0% |
| !!! | AAAAGCATCAATACTTTATT+TGG | + | chr8_2:8206674-8206693 | None:intergenic | 20.0% |
| !!! | ATTTTCAGATTTCTAATTAC+TGG | - | chr8_2:8206793-8206812 | Msa1231930:intron | 20.0% |
| !!! | AAAAACACAATAAAGAGTAT+TGG | + | chr8_2:8206998-8207017 | None:intergenic | 20.0% |
| !! | TTAGAAAATATCAAAGTTGT+TGG | - | chr8_2:8207223-8207242 | Msa1231930:CDS | 20.0% |
| !!! | AAAATTTAAAAAGGTATCTC+CGG | + | chr8_2:8207343-8207362 | None:intergenic | 20.0% |
| !! | CATTTGTGTTATGTTTGTTA+TGG | + | chr8_2:8199585-8199604 | None:intergenic | 25.0% |
| ! | ATTTGGAAGAAAGAAGAAAA+AGG | - | chr8_2:8199808-8199827 | Msa1231930:intron | 25.0% |
| ! | TTTGGAAGAAAGAAGAAAAA+GGG | - | chr8_2:8199809-8199828 | Msa1231930:intron | 25.0% |
| !! | TTATACTATATCTCTTTTCC+TGG | - | chr8_2:8200112-8200131 | Msa1231930:intron | 25.0% |
| ! | TGTATATGATTCATAATAGC+AGG | + | chr8_2:8200221-8200240 | None:intergenic | 25.0% |
| !! | ACATTGGTAATAGTTTGAAA+AGG | - | chr8_2:8200271-8200290 | Msa1231930:intron | 25.0% |
| !! | CATTGGTAATAGTTTGAAAA+GGG | - | chr8_2:8200272-8200291 | Msa1231930:intron | 25.0% |
| !!! | TTGTCTATCTTCTTTAGAAT+TGG | - | chr8_2:8200601-8200620 | Msa1231930:CDS | 25.0% |
| !! | GATTTGCTTTATTACTAAGT+TGG | - | chr8_2:8200653-8200672 | Msa1231930:intron | 25.0% |
| !!! | ATAAGAAAATGGATTAAACC+TGG | + | chr8_2:8200846-8200865 | None:intergenic | 25.0% |
| ! | AACAACATAATCTCTTGATT+TGG | - | chr8_2:8200992-8201011 | Msa1231930:intron | 25.0% |
| ! | ACAACATAATCTCTTGATTT+GGG | - | chr8_2:8200993-8201012 | Msa1231930:intron | 25.0% |
| ! | TTTGATGGAAATAGATTAGA+GGG | + | chr8_2:8201061-8201080 | None:intergenic | 25.0% |
| ! | ATTTGATGGAAATAGATTAG+AGG | + | chr8_2:8201062-8201081 | None:intergenic | 25.0% |
| ! | TAATCTATTTCCATCAAATG+TGG | - | chr8_2:8201063-8201082 | Msa1231930:intron | 25.0% |
| ! | TTATTTGTAAACATTTGCGT+TGG | - | chr8_2:8201674-8201693 | Msa1231930:intron | 25.0% |
| ! | AAATATCTGATCCAATTGTT+AGG | + | chr8_2:8201946-8201965 | None:intergenic | 25.0% |
| !!! | ATAGTTTTTTTTATGGTGTC+AGG | - | chr8_2:8202124-8202143 | Msa1231930:intron | 25.0% |
| ! | GTACAAACTGTTTATTTGAA+AGG | - | chr8_2:8202200-8202219 | Msa1231930:intron | 25.0% |
| !! | TTAAGCATTTTTGACAGATT+TGG | + | chr8_2:8202487-8202506 | None:intergenic | 25.0% |
| !!! | CTTAAGCTATACCTTTTTTA+TGG | - | chr8_2:8202502-8202521 | Msa1231930:intron | 25.0% |
| ! | CAATTCTTTCACCATAAAAA+AGG | + | chr8_2:8202516-8202535 | None:intergenic | 25.0% |
| !! | TTTTATGGTGAAAGAATTGT+TGG | - | chr8_2:8202517-8202536 | Msa1231930:CDS | 25.0% |
| ! | AAATAGGTATATTCACACAA+TGG | + | chr8_2:8202662-8202681 | None:intergenic | 25.0% |
| !! | ACTTGTATGCATTTGATTTA+AGG | - | chr8_2:8202788-8202807 | Msa1231930:intron | 25.0% |
| ! | ACGAAATATTGTAAAGAAGA+TGG | - | chr8_2:8203524-8203543 | Msa1231930:intron | 25.0% |
| ! | CGAAATATTGTAAAGAAGAT+GGG | - | chr8_2:8203525-8203544 | Msa1231930:intron | 25.0% |
| ! | AATTGTTAACATTAATGCTC+AGG | - | chr8_2:8203817-8203836 | Msa1231930:intron | 25.0% |
| ! | ATTGTTAACATTAATGCTCA+GGG | - | chr8_2:8203818-8203837 | Msa1231930:intron | 25.0% |
| ! | GACACTAAATAGTGTATTAT+TGG | + | chr8_2:8204362-8204381 | None:intergenic | 25.0% |
| ! | TTAAAAAACAGTGTAGTTCA+TGG | + | chr8_2:8204420-8204439 | None:intergenic | 25.0% |
| ! | ATCCTTCAGTAGAATTATTT+AGG | - | chr8_2:8204536-8204555 | Msa1231930:CDS | 25.0% |
| ! | TAAAACATCTTACATGTTCT+TGG | + | chr8_2:8204815-8204834 | None:intergenic | 25.0% |
| ! | CAACTTTATCTATTTATTCG+GGG | + | chr8_2:8204967-8204986 | None:intergenic | 25.0% |
| ! | CCAACTTTATCTATTTATTC+GGG | + | chr8_2:8204968-8204987 | None:intergenic | 25.0% |
| ! | AAATTCTCAAAAGGATAGAT+GGG | + | chr8_2:8205361-8205380 | None:intergenic | 25.0% |
| ! | TAAATTCTCAAAAGGATAGA+TGG | + | chr8_2:8205362-8205381 | None:intergenic | 25.0% |
| ! | TGCATTTCTAAATTCTCAAA+AGG | + | chr8_2:8205370-8205389 | None:intergenic | 25.0% |
| ! | AATTTAGAAATGCAGTAATG+TGG | - | chr8_2:8205376-8205395 | Msa1231930:intron | 25.0% |
| !! | TAATAAAGCTTTTACGAAAC+AGG | - | chr8_2:8205849-8205868 | Msa1231930:intron | 25.0% |
| !! | CATTTAGCTTACTTTGATAT+AGG | + | chr8_2:8206006-8206025 | None:intergenic | 25.0% |
| ! | AAGTAAGCTAAATGACTAAT+AGG | - | chr8_2:8206012-8206031 | Msa1231930:intron | 25.0% |
| ! | AATCTTAATCAAAGAGATCA+AGG | + | chr8_2:8206318-8206337 | None:intergenic | 25.0% |
| !! | AATGCAATATCATTTGGAAT+CGG | + | chr8_2:8206519-8206538 | None:intergenic | 25.0% |
| !! | ATCAATACTTTATTTGGAGT+TGG | + | chr8_2:8206668-8206687 | None:intergenic | 25.0% |
| !! | AATAGAAAGTTTTCATACCT+AGG | + | chr8_2:8206722-8206741 | None:intergenic | 25.0% |
| !!! | TGGTTTTGAATTATATAGAC+CGG | + | chr8_2:8206978-8206997 | None:intergenic | 25.0% |
| !! | TCTTATTTATGTGATGTTAC+AGG | - | chr8_2:8207102-8207121 | Msa1231930:CDS | 25.0% |
| ! | TACGTGCATATTAATCATAA+TGG | + | chr8_2:8207390-8207409 | None:intergenic | 25.0% |
| !! | TGGTATGATTTTCCTTTTTA+TGG | - | chr8_2:8207471-8207490 | Msa1231930:CDS | 25.0% |
| !!! | AACAAGTTTTGTCCATAAAA+AGG | + | chr8_2:8207486-8207505 | None:intergenic | 25.0% |
| !!! | TTTTATGGACAAAACTTGTT+TGG | - | chr8_2:8207486-8207505 | Msa1231930:CDS | 25.0% |
| !!! | TTTTCAGCTTTGTTGTTGTT+GGG | + | chr8_2:8199725-8199744 | None:intergenic | 30.0% |
| !! | AATGATGAAGGTGTTGTATT+TGG | - | chr8_2:8199791-8199810 | Msa1231930:intron | 30.0% |
| AAGAAAGAAGAAAAAGGGTA+AGG | - | chr8_2:8199814-8199833 | Msa1231930:intron | 30.0% | |
| !! | TATCACTACTTTTCACTTCA+TGG | + | chr8_2:8199937-8199956 | None:intergenic | 30.0% |
| TGAAGTGAAAAGTAGTGATA+AGG | - | chr8_2:8199937-8199956 | Msa1231930:CDS | 30.0% | |
| AAAAGTAGTGATAAGGTAAG+TGG | - | chr8_2:8199944-8199963 | Msa1231930:CDS | 30.0% | |
| !! | TGATAAGGTAAGTGGATTTT+CGG | - | chr8_2:8199952-8199971 | Msa1231930:CDS | 30.0% |
| ATAAACTACCAAACTAAACC+AGG | + | chr8_2:8200133-8200152 | None:intergenic | 30.0% | |
| ACCTAACAAATGAATGAGTA+AGG | + | chr8_2:8200398-8200417 | None:intergenic | 30.0% | |
| TCAGGAATAATCTTGTAATC+TGG | - | chr8_2:8200450-8200469 | Msa1231930:intron | 30.0% | |
| ACAAGATTGATCACGTATTT+CGG | + | chr8_2:8200580-8200599 | None:intergenic | 30.0% | |
| GTAGACATAATCAAGTGATA+TGG | - | chr8_2:8200728-8200747 | Msa1231930:intron | 30.0% | |
| CTAGAAACTTCATTTCCAAA+AGG | + | chr8_2:8200801-8200820 | None:intergenic | 30.0% | |
| ACCTCAATGAATATTGTTTC+TGG | + | chr8_2:8200882-8200901 | None:intergenic | 30.0% | |
| GAGATTATGTTGTTAGACTT+AGG | + | chr8_2:8200986-8201005 | None:intergenic | 30.0% | |
| AATAGAAGAACCACATTTGA+TGG | + | chr8_2:8201076-8201095 | None:intergenic | 30.0% | |
| ATCAAACCGCATAAAATAAC+AGG | + | chr8_2:8201845-8201864 | None:intergenic | 30.0% | |
| !! | ATATTCAAGTACTGATATCG+AGG | - | chr8_2:8201970-8201989 | Msa1231930:intron | 30.0% |
| ATCTAGCTATGATCATTACT+AGG | + | chr8_2:8202304-8202323 | None:intergenic | 30.0% | |
| !! | ATTTTTGACAGATTTGGTAG+AGG | + | chr8_2:8202481-8202500 | None:intergenic | 30.0% |
| TGATTACATGTCATAAACCA+TGG | + | chr8_2:8202545-8202564 | None:intergenic | 30.0% | |
| !!! | CGTTGATGTTGTTTTGTATA+TGG | - | chr8_2:8202937-8202956 | Msa1231930:intron | 30.0% |
| CTAGAAAGAAAGATGTAAGA+AGG | + | chr8_2:8202972-8202991 | None:intergenic | 30.0% | |
| ! | CTTACATCTTTCTTTCTAGT+TGG | - | chr8_2:8202973-8202992 | Msa1231930:intron | 30.0% |
| ACAGCATATAATTGAATGTC+TGG | - | chr8_2:8203280-8203299 | Msa1231930:CDS | 30.0% | |
| CAGCATATAATTGAATGTCT+GGG | - | chr8_2:8203281-8203300 | Msa1231930:CDS | 30.0% | |
| AGTAGTACTATTAAACTTCC+AGG | + | chr8_2:8203384-8203403 | None:intergenic | 30.0% | |
| ! | TTGTTCTTACTCTGAAAACA+TGG | + | chr8_2:8203498-8203517 | None:intergenic | 30.0% |
| AAAATACTTGGATTGATTGC+AGG | - | chr8_2:8203654-8203673 | Msa1231930:intron | 30.0% | |
| ATGCTACAATAACTATACCA+TGG | - | chr8_2:8203907-8203926 | Msa1231930:intron | 30.0% | |
| !! | TGCGTTTTCTTTGATTTATG+TGG | - | chr8_2:8203968-8203987 | Msa1231930:intron | 30.0% |
| !!! | AAGATATTTTTAGAGAGCAC+CGG | - | chr8_2:8204324-8204343 | Msa1231930:intron | 30.0% |
| ACTATTTAGTGTCTGTACTT+TGG | - | chr8_2:8204369-8204388 | Msa1231930:intron | 30.0% | |
| ACATAGTAGAAAAAGTCAGA+CGG | + | chr8_2:8204515-8204534 | None:intergenic | 30.0% | |
| AGCCTAAATAATTCTACTGA+AGG | + | chr8_2:8204541-8204560 | None:intergenic | 30.0% | |
| ACTCACAGATATGATCATAT+CGG | + | chr8_2:8204647-8204666 | None:intergenic | 30.0% | |
| TGAAATATGGTATGAAAGCA+GGG | + | chr8_2:8204700-8204719 | None:intergenic | 30.0% | |
| ATGAAATATGGTATGAAAGC+AGG | + | chr8_2:8204701-8204720 | None:intergenic | 30.0% | |
| TTGTTCATTGATCATCTTTC+TGG | - | chr8_2:8204746-8204765 | Msa1231930:intron | 30.0% | |
| GATAAGAACCTATAGTTCAA+GGG | + | chr8_2:8204772-8204791 | None:intergenic | 30.0% | |
| TGATAAGAACCTATAGTTCA+AGG | + | chr8_2:8204773-8204792 | None:intergenic | 30.0% | |
| TTCTACTCAAAGTTTGTGAA+TGG | - | chr8_2:8204874-8204893 | Msa1231930:intron | 30.0% | |
| TTGACAGAATGTACGTATAA+CGG | + | chr8_2:8204918-8204937 | None:intergenic | 30.0% | |
| CCCGAATAAATAGATAAAGT+TGG | - | chr8_2:8204965-8204984 | Msa1231930:CDS | 30.0% | |
| !! | ATAACTATTGATTTGACTCG+AGG | + | chr8_2:8205149-8205168 | None:intergenic | 30.0% |
| ! | TCAAATACGTTGTCAAGTTT+TGG | - | chr8_2:8205193-8205212 | Msa1231930:CDS | 30.0% |
| ! | TGCTGTTTGAGATAATTGAA+CGG | + | chr8_2:8205253-8205272 | None:intergenic | 30.0% |
| AATTCTCAAAAGGATAGATG+GGG | + | chr8_2:8205360-8205379 | None:intergenic | 30.0% | |
| ! | TTTTGCCGGTAATTTTCAAA+CGG | + | chr8_2:8205471-8205490 | None:intergenic | 30.0% |
| ! | TAATTCACATGAAGTTTTGC+CGG | + | chr8_2:8205485-8205504 | None:intergenic | 30.0% |
| !! | GTGTTTTTAAACGTTGTTAG+TGG | - | chr8_2:8205668-8205687 | Msa1231930:intron | 30.0% |
| AAAATATTGCTGTCCTGATT+TGG | - | chr8_2:8205779-8205798 | Msa1231930:intron | 30.0% | |
| AAAAACTCAAGACCTATGTT+TGG | - | chr8_2:8205885-8205904 | Msa1231930:intron | 30.0% | |
| ACTAGTAACATACCAAACAT+AGG | + | chr8_2:8205900-8205919 | None:intergenic | 30.0% | |
| AAATGACTAATAGGTCAATG+AGG | - | chr8_2:8206021-8206040 | Msa1231930:intron | 30.0% | |
| GTCAATGAGGACAAAATTTA+TGG | - | chr8_2:8206034-8206053 | Msa1231930:intron | 30.0% | |
| AGAGTTAGTTAGAACTTAGA+AGG | - | chr8_2:8206124-8206143 | Msa1231930:intron | 30.0% | |
| GAGTTAGTTAGAACTTAGAA+GGG | - | chr8_2:8206125-8206144 | Msa1231930:intron | 30.0% | |
| !! | AGACTCTAATTTGTTAAAGG+TGG | - | chr8_2:8206435-8206454 | Msa1231930:intron | 30.0% |
| GAAAAAAGGAAAAGACAACA+GGG | + | chr8_2:8206480-8206499 | None:intergenic | 30.0% | |
| ! | ATGCAATATCATTTGGAATC+GGG | + | chr8_2:8206518-8206537 | None:intergenic | 30.0% |
| CCTATGAATGCAATATCATT+TGG | + | chr8_2:8206525-8206544 | None:intergenic | 30.0% | |
| CCAAATGATATTGCATTCAT+AGG | - | chr8_2:8206522-8206541 | Msa1231930:intron | 30.0% | |
| ATTGCATTCATAGGTGAAAT+TGG | - | chr8_2:8206531-8206550 | Msa1231930:intron | 30.0% | |
| TACTACTGGATACTCTAAAT+TGG | + | chr8_2:8206635-8206654 | None:intergenic | 30.0% | |
| ! | AAAGTTTTCATCATGTACCT+AGG | - | chr8_2:8206702-8206721 | Msa1231930:intron | 30.0% |
| !! | AAGATAACTCACTTTTCTGT+TGG | - | chr8_2:8206743-8206762 | Msa1231930:intron | 30.0% |
| GCAATATTGAACTATGTTGT+CGG | - | chr8_2:8206842-8206861 | Msa1231930:intron | 30.0% | |
| ! | TTTTGAATTATATAGACCGG+AGG | + | chr8_2:8206975-8206994 | None:intergenic | 30.0% |
| ATGCAATGTGGAATTCTTTA+GGG | + | chr8_2:8207022-8207041 | None:intergenic | 30.0% | |
| !! | TATAATGGATACATGCAATG+TGG | + | chr8_2:8207034-8207053 | None:intergenic | 30.0% |
| AGGTTACTAGAATGGAAAAA+AGG | - | chr8_2:8207122-8207141 | Msa1231930:CDS | 30.0% | |
| GGTTACTAGAATGGAAAAAA+GGG | - | chr8_2:8207123-8207142 | Msa1231930:CDS | 30.0% | |
| GTGTGAAGAAACTTGTATAT+AGG | - | chr8_2:8207426-8207445 | Msa1231930:CDS | 30.0% | |
| ACATATCGTTAGATACATAC+TGG | - | chr8_2:8207451-8207470 | Msa1231930:CDS | 30.0% | |
| ! | GATTCTGGAAAAAGAGAAAT+TGG | + | chr8_2:8207537-8207556 | None:intergenic | 30.0% |
| GTGACAATGATTGTGTTGAA+GGG | + | chr8_2:8199631-8199650 | None:intergenic | 35.0% | |
| AGTGACAATGATTGTGTTGA+AGG | + | chr8_2:8199632-8199651 | None:intergenic | 35.0% | |
| !!! | GTTTTCAGCTTTGTTGTTGT+TGG | + | chr8_2:8199726-8199745 | None:intergenic | 35.0% |
| CTTCATCATTACCCTCAATT+GGG | + | chr8_2:8199781-8199800 | None:intergenic | 35.0% | |
| AGGGTAAGGAAAAAGTTTAC+TGG | - | chr8_2:8199828-8199847 | Msa1231930:intron | 35.0% | |
| GGGTAAGGAAAAAGTTTACT+GGG | - | chr8_2:8199829-8199848 | Msa1231930:intron | 35.0% | |
| TGTAGATCTTGTAGTGTTTC+TGG | - | chr8_2:8199896-8199915 | Msa1231930:CDS | 35.0% | |
| ! | GATTTTCGGTTATGGATGAT+GGG | - | chr8_2:8199966-8199985 | Msa1231930:CDS | 35.0% |
| TTAACCTCAGACAATCTCAA+AGG | + | chr8_2:8200031-8200050 | None:intergenic | 35.0% | |
| ! | TGAGATTGTCTGAGGTTAAT+AGG | - | chr8_2:8200032-8200051 | Msa1231930:intron | 35.0% |
| ! | GAGATTGTCTGAGGTTAATA+GGG | - | chr8_2:8200033-8200052 | Msa1231930:intron | 35.0% |
| ! | AGATTGTCTGAGGTTAATAG+GGG | - | chr8_2:8200034-8200053 | Msa1231930:intron | 35.0% |
| GGAGAATTCGTTTGTAAGTT+TGG | - | chr8_2:8200074-8200093 | Msa1231930:intron | 35.0% | |
| ! | TCTCTTTTCCTGGTTTAGTT+TGG | - | chr8_2:8200122-8200141 | Msa1231930:intron | 35.0% |
| CTGATTGTAATCACATGTGT+TGG | - | chr8_2:8200301-8200320 | Msa1231930:intron | 35.0% | |
| ATGAATGAGTAAGGCTCAAA+GGG | + | chr8_2:8200389-8200408 | None:intergenic | 35.0% | |
| AATGAATGAGTAAGGCTCAA+AGG | + | chr8_2:8200390-8200409 | None:intergenic | 35.0% | |
| GCCTTACTCATTCATTTGTT+AGG | - | chr8_2:8200394-8200413 | Msa1231930:intron | 35.0% | |
| ! | CATTCATTTGTTAGGTAGAG+TGG | - | chr8_2:8200402-8200421 | Msa1231930:intron | 35.0% |
| !! | GTATACTTGGCTTTGATTTC+AGG | - | chr8_2:8200769-8200788 | Msa1231930:intron | 35.0% |
| !! | AATGAAGTTTCTAGAGTGCT+TGG | - | chr8_2:8200807-8200826 | Msa1231930:intron | 35.0% |
| GCCAGAAACAATATTCATTG+AGG | - | chr8_2:8200878-8200897 | Msa1231930:intron | 35.0% | |
| ! | TTTAAAGTCCCACGTATGAT+TGG | - | chr8_2:8201317-8201336 | Msa1231930:intron | 35.0% |
| AATCACTACCAATCATACGT+GGG | + | chr8_2:8201328-8201347 | None:intergenic | 35.0% | |
| AAATCACTACCAATCATACG+TGG | + | chr8_2:8201329-8201348 | None:intergenic | 35.0% | |
| CAAAGCGTATTGAGTGTTAA+TGG | - | chr8_2:8201465-8201484 | Msa1231930:CDS | 35.0% | |
| !! | GAAGGTTCATTGACTTTAGT+TGG | - | chr8_2:8201513-8201532 | Msa1231930:intron | 35.0% |
| AGATGATTAACTTTCTCCTG+TGG | - | chr8_2:8201624-8201643 | Msa1231930:intron | 35.0% | |
| !!! | TTTGGGCCTGTTATTTTATG+CGG | - | chr8_2:8201836-8201855 | Msa1231930:intron | 35.0% |
| TATCTGATCCAATTGTTAGG+CGG | + | chr8_2:8201943-8201962 | None:intergenic | 35.0% | |
| TAGGATGATGCAAGTCAATA+TGG | + | chr8_2:8202285-8202304 | None:intergenic | 35.0% | |
| !! | TGAAAGAATTGTTGGTTCCA+TGG | - | chr8_2:8202525-8202544 | Msa1231930:CDS | 35.0% |
| ACATGTAATCAGTGTGAAAC+AGG | - | chr8_2:8202554-8202573 | Msa1231930:CDS | 35.0% | |
| AATATGCTCACCAATAGAAC+CGG | + | chr8_2:8202630-8202649 | None:intergenic | 35.0% | |
| AATTGCAGTCAAGAATGTGA+AGG | + | chr8_2:8202842-8202861 | None:intergenic | 35.0% | |
| ATTGGACATGTGACAAAATC+TGG | - | chr8_2:8202881-8202900 | Msa1231930:intron | 35.0% | |
| TATAATTGAATGTCTGGGAG+AGG | - | chr8_2:8203286-8203305 | Msa1231930:CDS | 35.0% | |
| TATTAAACTTCCAGGAAAGC+AGG | + | chr8_2:8203376-8203395 | None:intergenic | 35.0% | |
| AGATCACAATAGTAGATCCA+TGG | + | chr8_2:8203927-8203946 | None:intergenic | 35.0% | |
| TGGATCTACTATTGTGATCT+AGG | - | chr8_2:8203927-8203946 | Msa1231930:intron | 35.0% | |
| GGATCTACTATTGTGATCTA+GGG | - | chr8_2:8203928-8203947 | Msa1231930:intron | 35.0% | |
| ! | TTTGATTTATGTGGTCAGCT+TGG | - | chr8_2:8203977-8203996 | Msa1231930:intron | 35.0% |
| !!! | GTTTTTGAGATGTCACATTC+AGG | - | chr8_2:8204001-8204020 | Msa1231930:intron | 35.0% |
| CTCACTAAGAAACATTTCAC+TGG | + | chr8_2:8204047-8204066 | None:intergenic | 35.0% | |
| CAGCTAAAACATCTGAATCT+AGG | + | chr8_2:8204075-8204094 | None:intergenic | 35.0% | |
| !!! | CTAGATTCAGATGTTTTAGC+TGG | - | chr8_2:8204073-8204092 | Msa1231930:intron | 35.0% |
| TGAAAATGTCAAGCCTAGTA+TGG | - | chr8_2:8204187-8204206 | Msa1231930:intron | 35.0% | |
| GAAAATGTCAAGCCTAGTAT+GGG | - | chr8_2:8204188-8204207 | Msa1231930:intron | 35.0% | |
| AAAGAACTTTCCAGCATAGT+AGG | + | chr8_2:8204217-8204236 | None:intergenic | 35.0% | |
| !!! | AGATATTTTTAGAGAGCACC+GGG | - | chr8_2:8204325-8204344 | Msa1231930:intron | 35.0% |
| ACAGGATCAAGGCAATTTAA+TGG | - | chr8_2:8204604-8204623 | Msa1231930:intron | 35.0% | |
| ATTCTCAAAAGGATAGATGG+GGG | + | chr8_2:8205359-8205378 | None:intergenic | 35.0% | |
| !!! | AGGTCTTGAGTTTTTAGAAC+AGG | + | chr8_2:8205880-8205899 | None:intergenic | 35.0% |
| TTTGATATAGGTCAGATGAC+GGG | + | chr8_2:8205994-8206013 | None:intergenic | 35.0% | |
| CTTTGATATAGGTCAGATGA+CGG | + | chr8_2:8205995-8206014 | None:intergenic | 35.0% | |
| GTTCTAACTAACTCTTATGC+TGG | + | chr8_2:8206119-8206138 | None:intergenic | 35.0% | |
| GGAAAAAAGGAAAAGACAAC+AGG | + | chr8_2:8206481-8206500 | None:intergenic | 35.0% | |
| !!! | TTTCCTTTTTTCCAGTTGCT+TGG | - | chr8_2:8206488-8206507 | Msa1231930:intron | 35.0% |
| ! | TTCATAGGTGAAATTGGTCT+TGG | - | chr8_2:8206537-8206556 | Msa1231930:intron | 35.0% |
| TTGGTACACTCTTATACTAC+TGG | + | chr8_2:8206649-8206668 | None:intergenic | 35.0% | |
| AAATGACATAAAGACACACC+AGG | + | chr8_2:8206777-8206796 | None:intergenic | 35.0% | |
| !! | AAAAAGACTAGCCGAGATTT+TGG | - | chr8_2:8206894-8206913 | Msa1231930:intron | 35.0% |
| TGCAATGTGGAATTCTTTAG+GGG | + | chr8_2:8207021-8207040 | None:intergenic | 35.0% | |
| CATGCAATGTGGAATTCTTT+AGG | + | chr8_2:8207023-8207042 | None:intergenic | 35.0% | |
| GATGTTACAGGTTACTAGAA+TGG | - | chr8_2:8207114-8207133 | Msa1231930:CDS | 35.0% | |
| CAGAATGTGTATAGTACCAA+AGG | - | chr8_2:8207171-8207190 | Msa1231930:CDS | 35.0% | |
| !!! | AAAACTTTTTCAGCTGCCTT+TGG | + | chr8_2:8207190-8207209 | None:intergenic | 35.0% |
| ! | AAAGGCAGCTGAAAAAGTTT+TGG | - | chr8_2:8207189-8207208 | Msa1231930:CDS | 35.0% |
| ! | AAGGCAGCTGAAAAAGTTTT+GGG | - | chr8_2:8207190-8207209 | Msa1231930:CDS | 35.0% |
| !!! | GAAAAAGTTTTGGGAACTGA+AGG | - | chr8_2:8207199-8207218 | Msa1231930:CDS | 35.0% |
| ! | ATATCAAAGTTGTTGGTTGC+AGG | - | chr8_2:8207230-8207249 | Msa1231930:CDS | 35.0% |
| AGCAAGTAAATTGTCACACT+AGG | - | chr8_2:8207301-8207320 | Msa1231930:CDS | 35.0% | |
| GCAAGTAAATTGTCACACTA+GGG | - | chr8_2:8207302-8207321 | Msa1231930:CDS | 35.0% | |
| ! | CACGTAGTGTTTCTTCTTTT+TGG | - | chr8_2:8207404-8207423 | Msa1231930:CDS | 35.0% |
| GCAGATTATAAGAGAGATTC+TGG | + | chr8_2:8207552-8207571 | None:intergenic | 35.0% | |
| TGATTCTTCCATATACAGCA+TGG | + | chr8_2:8207587-8207606 | None:intergenic | 35.0% | |
| !! | TTGTTGTTGGTGATGGGTTA+TGG | + | chr8_2:8199655-8199674 | None:intergenic | 40.0% |
| TAGCAGAGTAAACCCAATTG+AGG | - | chr8_2:8199766-8199785 | Msa1231930:intron | 40.0% | |
| AGCAGAGTAAACCCAATTGA+GGG | - | chr8_2:8199767-8199786 | Msa1231930:intron | 40.0% | |
| CCTTCATCATTACCCTCAAT+TGG | + | chr8_2:8199782-8199801 | None:intergenic | 40.0% | |
| CCAATTGAGGGTAATGATGA+AGG | - | chr8_2:8199779-8199798 | Msa1231930:intron | 40.0% | |
| TACTGGGTTTGTAGCAATTG+TGG | - | chr8_2:8199845-8199864 | Msa1231930:intron | 40.0% | |
| ACTGGGTTTGTAGCAATTGT+GGG | - | chr8_2:8199846-8199865 | Msa1231930:intron | 40.0% | |
| AGCAATTGTGGGTATAGTAC+TGG | - | chr8_2:8199857-8199876 | Msa1231930:intron | 40.0% | |
| ! | GTATAGTACTGGACAATGGT+GGG | - | chr8_2:8199868-8199887 | Msa1231930:CDS | 40.0% |
| ! | TATAGTACTGGACAATGGTG+GGG | - | chr8_2:8199869-8199888 | Msa1231930:CDS | 40.0% |
| !! | GGTAAGTGGATTTTCGGTTA+TGG | - | chr8_2:8199958-8199977 | Msa1231930:CDS | 40.0% |
| ! | GGATTTTCGGTTATGGATGA+TGG | - | chr8_2:8199965-8199984 | Msa1231930:CDS | 40.0% |
| ! | GTAATCACATGTGTTGGTGT+CGG | - | chr8_2:8200307-8200326 | Msa1231930:intron | 40.0% |
| ! | TCATTTGTTAGGTAGAGTGG+AGG | - | chr8_2:8200405-8200424 | Msa1231930:intron | 40.0% |
| ! | CATTTGTTAGGTAGAGTGGA+GGG | - | chr8_2:8200406-8200425 | Msa1231930:intron | 40.0% |
| ! | CTACGTCTTTGATAGCATAC+TGG | + | chr8_2:8200547-8200566 | None:intergenic | 40.0% |
| CAGTATGCTATCAAAGACGT+AGG | - | chr8_2:8200545-8200564 | Msa1231930:intron | 40.0% | |
| TAGTGCGTGTATTAGTGAAC+TGG | + | chr8_2:8201445-8201464 | None:intergenic | 40.0% | |
| !! | GGTTCATTGACTTTAGTTGG+CGG | - | chr8_2:8201516-8201535 | Msa1231930:intron | 40.0% |
| !! | GTTCATTGACTTTAGTTGGC+GGG | - | chr8_2:8201517-8201536 | Msa1231930:intron | 40.0% |
| !! | TTCATTGACTTTAGTTGGCG+GGG | - | chr8_2:8201518-8201537 | Msa1231930:intron | 40.0% |
| !! | TGACAGAGTGTTGAGCAAAT+TGG | - | chr8_2:8201905-8201924 | Msa1231930:intron | 40.0% |
| !! | CAAGTACTGATATCGAGGTT+CGG | - | chr8_2:8201975-8201994 | Msa1231930:intron | 40.0% |
| AAGTTCAGTATATCTCCCCT+CGG | - | chr8_2:8202159-8202178 | Msa1231930:intron | 40.0% | |
| AAAGGAATAATGAGGAGTCC+TGG | - | chr8_2:8202218-8202237 | Msa1231930:intron | 40.0% | |
| ! | TTTGACAGATTTGGTAGAGG+AGG | + | chr8_2:8202478-8202497 | None:intergenic | 40.0% |
| AATCAGTGTGAAACAGGTGA+AGG | - | chr8_2:8202560-8202579 | Msa1231930:CDS | 40.0% | |
| TGCAAAGACAACAAACATCC+CGG | - | chr8_2:8202608-8202627 | Msa1231930:intron | 40.0% | |
| AACAAACATCCCGGTTCTAT+TGG | - | chr8_2:8202617-8202636 | Msa1231930:intron | 40.0% | |
| ATATGCTCACCAATAGAACC+GGG | + | chr8_2:8202629-8202648 | None:intergenic | 40.0% | |
| GTTAGATGATACAGCAAAGC+TGG | - | chr8_2:8202742-8202761 | Msa1231930:intron | 40.0% | |
| ACAAAATCTGGAGACATAGC+AGG | - | chr8_2:8202893-8202912 | Msa1231930:intron | 40.0% | |
| !! | AATGCTAAAGAGTGCCCTTA+GGG | + | chr8_2:8203169-8203188 | None:intergenic | 40.0% |
| !! | AAATGCTAAAGAGTGCCCTT+AGG | + | chr8_2:8203170-8203189 | None:intergenic | 40.0% |
| ACAAATTCTACCTGCTTTCC+TGG | - | chr8_2:8203363-8203382 | Msa1231930:intron | 40.0% | |
| GTAAAGAAGATGGGATGAAG+TGG | - | chr8_2:8203534-8203553 | Msa1231930:intron | 40.0% | |
| CGAGCTGTGAAAAATCGATT+TGG | - | chr8_2:8203869-8203888 | Msa1231930:intron | 40.0% | |
| ATTGTAGCATACCTCATCAG+TGG | + | chr8_2:8203897-8203916 | None:intergenic | 40.0% | |
| ACTCGCTGTAGCTGTAATAA+TGG | - | chr8_2:8204096-8204115 | Msa1231930:intron | 40.0% | |
| ! | GCTGTAGCTGTAATAATGGA+TGG | - | chr8_2:8204100-8204119 | Msa1231930:intron | 40.0% |
| CATAGTAGGAAACCCATACT+AGG | + | chr8_2:8204203-8204222 | None:intergenic | 40.0% | |
| TTATTGGCAATCACTAAGCC+CGG | + | chr8_2:8204346-8204365 | None:intergenic | 40.0% | |
| !! | TCATATCGGCTCTATTTGCT+TGG | + | chr8_2:8204633-8204652 | None:intergenic | 40.0% |
| TAGGTTCTTATCAAGCAAGC+AGG | - | chr8_2:8204780-8204799 | Msa1231930:intron | 40.0% | |
| AATAGGGTGAATTTGGCACT+TGG | + | chr8_2:8205304-8205323 | None:intergenic | 40.0% | |
| CCAAATTCACCCTATTCTGT+GGG | - | chr8_2:8205308-8205327 | Msa1231930:intron | 40.0% | |
| CAAATTCACCCTATTCTGTG+GGG | - | chr8_2:8205309-8205328 | Msa1231930:intron | 40.0% | |
| TTCTCAAAAGGATAGATGGG+GGG | + | chr8_2:8205358-8205377 | None:intergenic | 40.0% | |
| ATCGGCCGTTTGAAAATTAC+CGG | - | chr8_2:8205463-8205482 | Msa1231930:intron | 40.0% | |
| TATGAAGTCCATCGCATGTT+CGG | - | chr8_2:8205557-8205576 | Msa1231930:intron | 40.0% | |
| TTCTTGTGCCTTTGTTGAAC+AGG | - | chr8_2:8205643-8205662 | Msa1231930:intron | 40.0% | |
| AAACACAGCCTGTTCAACAA+AGG | + | chr8_2:8205654-8205673 | None:intergenic | 40.0% | |
| CATGAGACATTCACCAAATC+AGG | + | chr8_2:8205795-8205814 | None:intergenic | 40.0% | |
| !! | GATTTGGTGAATGTCTCATG+AGG | - | chr8_2:8205795-8205814 | Msa1231930:intron | 40.0% |
| GTGAATGTCTCATGAGGATT+GGG | - | chr8_2:8205801-8205820 | Msa1231930:intron | 40.0% | |
| ! | TGGTCTGTTAGTCTGTTGAA+AGG | - | chr8_2:8205968-8205987 | Msa1231930:intron | 40.0% |
| GAGTTGCAATCAGTTTAAGC+TGG | + | chr8_2:8206219-8206238 | None:intergenic | 40.0% | |
| !! | TGATTGCAACTCTCTGAAGT+TGG | - | chr8_2:8206227-8206246 | Msa1231930:intron | 40.0% |
| !! | TCTCTGAAGTTGGTTATCAG+TGG | - | chr8_2:8206237-8206256 | Msa1231930:intron | 40.0% |
| !! | CTCTGAAGTTGGTTATCAGT+GGG | - | chr8_2:8206238-8206257 | Msa1231930:intron | 40.0% |
| TGTAGGATAAACACCACTGT+TGG | - | chr8_2:8206261-8206280 | Msa1231930:intron | 40.0% | |
| !! | ATAGGTGAAATTGGTCTTGG+TGG | - | chr8_2:8206540-8206559 | Msa1231930:intron | 40.0% |
| TTTCTGTTGGATTTGATGCC+TGG | - | chr8_2:8206756-8206775 | Msa1231930:intron | 40.0% | |
| AGATGAAGCAGCCAAAATCT+CGG | + | chr8_2:8206908-8206927 | None:intergenic | 40.0% | |
| ! | TAACTGAAGCAATTAGCCTC+CGG | - | chr8_2:8206956-8206975 | Msa1231930:intron | 40.0% |
| TTGCTTCTTCTCATCACACT+AGG | + | chr8_2:8207286-8207305 | None:intergenic | 40.0% | |
| TCTCTCTACCATGCTGTATA+TGG | - | chr8_2:8207576-8207595 | Msa1231930:five_prime_UTR | 40.0% | |
| TTGTGTTGAAGGGAAACGAG+AGG | + | chr8_2:8199621-8199640 | None:intergenic | 45.0% | |
| !! | CTGCGTTTGTTGTTGGTGAT+GGG | + | chr8_2:8199661-8199680 | None:intergenic | 45.0% |
| !! | TGGAAAGCTGCGTTTGTTGT+TGG | + | chr8_2:8199668-8199687 | None:intergenic | 45.0% |
| !! | ATGAAGCGTTTTGGTGTGGT+GGG | + | chr8_2:8199697-8199716 | None:intergenic | 45.0% |
| !! | GAAGATGAAGCGTTTTGGTG+TGG | + | chr8_2:8199701-8199720 | None:intergenic | 45.0% |
| !! | TGGGAGAAGATGAAGCGTTT+TGG | + | chr8_2:8199706-8199725 | None:intergenic | 45.0% |
| ! | GTGGGTATAGTACTGGACAA+TGG | - | chr8_2:8199864-8199883 | Msa1231930:intron | 45.0% |
| ! | GGTATAGTACTGGACAATGG+TGG | - | chr8_2:8199867-8199886 | Msa1231930:CDS | 45.0% |
| !! | TTCGGTTATGGATGATGGGT+TGG | - | chr8_2:8199970-8199989 | Msa1231930:CDS | 45.0% |
| !! | TCGGTTATGGATGATGGGTT+GGG | - | chr8_2:8199971-8199990 | Msa1231930:CDS | 45.0% |
| ! | GGGGAGTTGATCATTTGCAT+TGG | - | chr8_2:8200053-8200072 | Msa1231930:intron | 45.0% |
| !! | CTTGGCTTTGATTTCAGGTC+TGG | - | chr8_2:8200774-8200793 | Msa1231930:intron | 45.0% |
| !! | GATTTCAGGTCTGGTCCTTT+TGG | - | chr8_2:8200783-8200802 | Msa1231930:intron | 45.0% |
| !! | GAAGTTTCTAGAGTGCTTGG+TGG | - | chr8_2:8200810-8200829 | Msa1231930:intron | 45.0% |
| ! | ACTTCTGGCGCTTTTAGTGA+TGG | - | chr8_2:8201151-8201170 | Msa1231930:intron | 45.0% |
| !! | GAAGAGTACTCTGTTGTTGC+AGG | - | chr8_2:8201554-8201573 | Msa1231930:intron | 45.0% |
| TTAACTTTCTCCTGTGGACG+TGG | - | chr8_2:8201630-8201649 | Msa1231930:intron | 45.0% | |
| TCTCCAGTTGTGTATGTCTC+TGG | - | chr8_2:8201742-8201761 | Msa1231930:intron | 45.0% | |
| TCACCAGAGACATACACAAC+TGG | + | chr8_2:8201748-8201767 | None:intergenic | 45.0% | |
| TGTGTATGTCTCTGGTGAAG+AGG | - | chr8_2:8201750-8201769 | Msa1231930:intron | 45.0% | |
| AGTTCAGTATATCTCCCCTC+GGG | - | chr8_2:8202160-8202179 | Msa1231930:intron | 45.0% | |
| AATCAACAACTAGTGCCCGA+GGG | + | chr8_2:8202178-8202197 | None:intergenic | 45.0% | |
| GAATAATGAGGAGTCCTGGA+GGG | - | chr8_2:8202222-8202241 | Msa1231930:intron | 45.0% | |
| TCCCTTTAACCAATGCCCTA+AGG | - | chr8_2:8203151-8203170 | Msa1231930:CDS | 45.0% | |
| !! | CCCTTAGGGCATTGGTTAAA+GGG | + | chr8_2:8203155-8203174 | None:intergenic | 45.0% |
| CCCTTTAACCAATGCCCTAA+GGG | - | chr8_2:8203152-8203171 | Msa1231930:CDS | 45.0% | |
| !! | TCGATTTGGATCCACTGATG+AGG | - | chr8_2:8203883-8203902 | Msa1231930:intron | 45.0% |
| GATGTCACATTCAGGACTTC+AGG | - | chr8_2:8204009-8204028 | Msa1231930:intron | 45.0% | |
| GTATGGGTTTCCTACTATGC+TGG | - | chr8_2:8204204-8204223 | Msa1231930:intron | 45.0% | |
| ! | CTTTGTCTCTCTGGTTCAAC+AGG | - | chr8_2:8204586-8204605 | Msa1231930:intron | 45.0% |
| ! | TCTCTGGTTCAACAGGATCA+AGG | - | chr8_2:8204593-8204612 | Msa1231930:intron | 45.0% |
| ! | CTTTCTGGCCCTTGAACTAT+AGG | - | chr8_2:8204761-8204780 | Msa1231930:intron | 45.0% |
| GCCAAATTCACCCTATTCTG+TGG | - | chr8_2:8205307-8205326 | Msa1231930:intron | 45.0% | |
| CCCACAGAATAGGGTGAATT+TGG | + | chr8_2:8205311-8205330 | None:intergenic | 45.0% | |
| CTGGCTCCTCTCATTGATAT+CGG | - | chr8_2:8205445-8205464 | Msa1231930:CDS | 45.0% | |
| AAACGGCCGATATCAATGAG+AGG | + | chr8_2:8205454-8205473 | None:intergenic | 45.0% | |
| !! | TATAAGCACCGAACATGCGA+TGG | + | chr8_2:8205568-8205587 | None:intergenic | 45.0% |
| TGCAAGATCTCCTGCAGTTT+CGG | + | chr8_2:8205705-8205724 | None:intergenic | 45.0% | |
| GGTGAATGTCTCATGAGGAT+TGG | - | chr8_2:8205800-8205819 | Msa1231930:intron | 45.0% | |
| ATGTCTCATGAGGATTGGGA+AGG | - | chr8_2:8205805-8205824 | Msa1231930:intron | 45.0% | |
| TGTCTCATGAGGATTGGGAA+GGG | - | chr8_2:8205806-8205825 | Msa1231930:intron | 45.0% | |
| TATTGCGAGACACACTACTC+AGG | + | chr8_2:8206166-8206185 | None:intergenic | 45.0% | |
| GCAATCAGTTTAAGCTGGTG+TGG | + | chr8_2:8206214-8206233 | None:intergenic | 45.0% | |
| AGTTGGTTATCAGTGGGTGT+AGG | - | chr8_2:8206244-8206263 | Msa1231930:intron | 45.0% | |
| CACCACTGTTGGTGCAAAAT+TGG | - | chr8_2:8206272-8206291 | Msa1231930:intron | 45.0% | |
| ! | TGCCAATTTTGCACCAACAG+TGG | + | chr8_2:8206277-8206296 | None:intergenic | 45.0% |
| GCTCCAAGCAACTGGAAAAA+AGG | + | chr8_2:8206494-8206513 | None:intergenic | 45.0% | |
| ! | GGAAAAAAGGGTACACACAG+TGG | - | chr8_2:8207135-8207154 | Msa1231930:CDS | 45.0% |
| GTACACACAGTGGCGAAATT+GGG | - | chr8_2:8207145-8207164 | Msa1231930:CDS | 45.0% | |
| ! | ACACTAGGGTGTTTGTGTTG+TGG | - | chr8_2:8207316-8207335 | Msa1231930:CDS | 45.0% |
| !! | ATATATTTATACAAAAAATT+TGG | - | chr8_2:8201103-8201122 | Msa1231930:intron | 5.0% |
| !!! | AATTAAATCTTTAAAATATT+AGG | + | chr8_2:8201208-8201227 | None:intergenic | 5.0% |
| !! | GCTGCGTTTGTTGTTGGTGA+TGG | + | chr8_2:8199662-8199681 | None:intergenic | 50.0% |
| !! | GATGAAGCGTTTTGGTGTGG+TGG | + | chr8_2:8199698-8199717 | None:intergenic | 50.0% |
| !! | CGGTTATGGATGATGGGTTG+GGG | - | chr8_2:8199972-8199991 | Msa1231930:CDS | 50.0% |
| !! | GCGTCCTTTGAGATTGTCTG+AGG | - | chr8_2:8200024-8200043 | Msa1231930:CDS | 50.0% |
| AGACGTGTCTGTCTCATGTC+TGG | + | chr8_2:8200250-8200269 | None:intergenic | 50.0% | |
| GAGACAGACACGTCTGACAT+TGG | - | chr8_2:8200255-8200274 | Msa1231930:intron | 50.0% | |
| ACACCGACACTGACATGTGT+AGG | - | chr8_2:8200330-8200349 | Msa1231930:intron | 50.0% | |
| GCACCTACACATGTCAGTGT+CGG | + | chr8_2:8200336-8200355 | None:intergenic | 50.0% | |
| ! | GACATGTGTAGGTGCTACAG+AGG | - | chr8_2:8200341-8200360 | Msa1231930:intron | 50.0% |
| TTGTTAGGTAGAGTGGAGGG+CGG | - | chr8_2:8200409-8200428 | Msa1231930:intron | 50.0% | |
| TTCCTGAACCGTCCAGCAAA+GGG | + | chr8_2:8200437-8200456 | None:intergenic | 50.0% | |
| ATTCCTGAACCGTCCAGCAA+AGG | + | chr8_2:8200438-8200457 | None:intergenic | 50.0% | |
| !! | GTTTCTAGAGTGCTTGGTGG+TGG | - | chr8_2:8200813-8200832 | Msa1231930:intron | 50.0% |
| TCAGATGCACGATGCAGTGT+AGG | - | chr8_2:8200958-8200977 | Msa1231930:intron | 50.0% | |
| ! | AGAGTACTCTTCCCAACACC+AGG | + | chr8_2:8201546-8201565 | None:intergenic | 50.0% |
| ATTGCTTCCATACTCGCCGA+AGG | - | chr8_2:8201700-8201719 | Msa1231930:intron | 50.0% | |
| TTCACCATCTTCGTGGCCTT+CGG | + | chr8_2:8201719-8201738 | None:intergenic | 50.0% | |
| GAGATGCTTCACCATCTTCG+TGG | + | chr8_2:8201726-8201745 | None:intergenic | 50.0% | |
| AGAGCAGACCGCCTAACAAT+TGG | - | chr8_2:8201932-8201951 | Msa1231930:intron | 50.0% | |
| ATCAACAACTAGTGCCCGAG+GGG | + | chr8_2:8202177-8202196 | None:intergenic | 50.0% | |
| GAATCAACAACTAGTGCCCG+AGG | + | chr8_2:8202179-8202198 | None:intergenic | 50.0% | |
| GGAATAATGAGGAGTCCTGG+AGG | - | chr8_2:8202221-8202240 | Msa1231930:intron | 50.0% | |
| GAGGGATTATGCAGGTGAGA+GGG | - | chr8_2:8202240-8202259 | Msa1231930:intron | 50.0% | |
| ACGATATGCTCCAAGACACG+AGG | + | chr8_2:8202920-8202939 | None:intergenic | 50.0% | |
| !! | GCCCTTAGGGCATTGGTTAA+AGG | + | chr8_2:8203156-8203175 | None:intergenic | 50.0% |
| !! | AAAGAGTGCCCTTAGGGCAT+TGG | + | chr8_2:8203163-8203182 | None:intergenic | 50.0% |
| CACAGCTCGAAGCATACGAT+GGG | + | chr8_2:8203858-8203877 | None:intergenic | 50.0% | |
| TCACAGCTCGAAGCATACGA+TGG | + | chr8_2:8203859-8203878 | None:intergenic | 50.0% | |
| CACCTTCTCCCCACAGAATA+GGG | + | chr8_2:8205320-8205339 | None:intergenic | 50.0% | |
| ACACCTTCTCCCCACAGAAT+AGG | + | chr8_2:8205321-8205340 | None:intergenic | 50.0% | |
| CAAAAGGATAGATGGGGGGA+GGG | + | chr8_2:8205354-8205373 | None:intergenic | 50.0% | |
| TCAAAAGGATAGATGGGGGG+AGG | + | chr8_2:8205355-8205374 | None:intergenic | 50.0% | |
| TTGACAGTGACCGAAACTGC+AGG | - | chr8_2:8205692-8205711 | Msa1231930:intron | 50.0% | |
| TAGCAGCTGCAATTTGCAGC+AGG | - | chr8_2:8205726-8205745 | Msa1231930:intron | 50.0% | |
| GTCTCATGAGGATTGGGAAG+GGG | - | chr8_2:8205807-8205826 | Msa1231930:intron | 50.0% | |
| TCTCATGAGGATTGGGAAGG+GGG | - | chr8_2:8205808-8205827 | Msa1231930:intron | 50.0% | |
| CTCTTATGCTGGCAATGAGC+TGG | + | chr8_2:8206108-8206127 | None:intergenic | 50.0% | |
| GGTACACACAGTGGCGAAAT+TGG | - | chr8_2:8207144-8207163 | Msa1231930:CDS | 50.0% | |
| ! | AGGGTGTTTGTGTTGTGGAC+CGG | - | chr8_2:8207321-8207340 | Msa1231930:CDS | 50.0% |
| !! | TTTGGTGTGGTGGGTTGGTG+TGG | + | chr8_2:8199688-8199707 | None:intergenic | 55.0% |
| !!! | AGCGTTTTGGTGTGGTGGGT+TGG | + | chr8_2:8199693-8199712 | None:intergenic | 55.0% |
| !! | TGGATGATGGGTTGGGGTCT+TGG | - | chr8_2:8199978-8199997 | Msa1231930:CDS | 55.0% |
| TCTTGGCTTCCGGAGAAGAG+TGG | - | chr8_2:8199995-8200014 | Msa1231930:CDS | 55.0% | |
| CTACAGAGGTAGCCAGTCAC+TGG | - | chr8_2:8200355-8200374 | Msa1231930:intron | 55.0% | |
| !! | CTTGGTGGTGGTCTTGTACC+AGG | - | chr8_2:8200825-8200844 | Msa1231930:intron | 55.0% |
| ACTTTAGTTGGCGGGGATCC+TGG | - | chr8_2:8201525-8201544 | Msa1231930:intron | 55.0% | |
| GAGTCCTGGAGGGATTATGC+AGG | - | chr8_2:8202232-8202251 | Msa1231930:intron | 55.0% | |
| CTCACCTGCATAATCCCTCC+AGG | + | chr8_2:8202239-8202258 | None:intergenic | 55.0% | |
| GGAGGGATTATGCAGGTGAG+AGG | - | chr8_2:8202239-8202258 | Msa1231930:intron | 55.0% | |
| CATAGCAGGACCTCGTGTCT+TGG | - | chr8_2:8202907-8202926 | Msa1231930:intron | 55.0% | |
| ! | AGAGAGACAAAGCGCCTACG+AGG | + | chr8_2:8204578-8204597 | None:intergenic | 55.0% |
| TCGTAGGCGCTTTGTCTCTC+TGG | - | chr8_2:8204577-8204596 | Msa1231930:intron | 55.0% | |
| CACCCTATTCTGTGGGGAGA+AGG | - | chr8_2:8205315-8205334 | Msa1231930:intron | 55.0% | |
| ATGAGGATTGGGAAGGGGGT+TGG | - | chr8_2:8205812-8205831 | Msa1231930:intron | 55.0% | |
| TTGGGAAGGGGGTTGGAAGT+AGG | - | chr8_2:8205819-8205838 | Msa1231930:intron | 55.0% | |
| AAGGGGGTTGGAAGTAGGCT+GGG | - | chr8_2:8205824-8205843 | Msa1231930:intron | 55.0% | |
| TGCTGGCAATGAGCTGGCAA+AGG | + | chr8_2:8206102-8206121 | None:intergenic | 55.0% | |
| AATCGGGAGCTCCAAGCAAC+TGG | + | chr8_2:8206502-8206521 | None:intergenic | 55.0% | |
| ! | TGGGTTGGGGTCTTGGCTTC+CGG | - | chr8_2:8199985-8200004 | Msa1231930:CDS | 60.0% |
| CGCAACTCGCCACTCTTCTC+CGG | + | chr8_2:8200007-8200026 | None:intergenic | 60.0% | |
| AGGGCAGACACTCCAGTGAC+TGG | + | chr8_2:8200370-8200389 | None:intergenic | 60.0% | |
| AGCCCTTTGCTGGACGGTTC+AGG | - | chr8_2:8200432-8200451 | Msa1231930:intron | 60.0% | |
| TTGGCGGGGATCCTGGTGTT+GGG | - | chr8_2:8201532-8201551 | Msa1231930:intron | 60.0% | |
| ATGGGGATGACCACGTCCAC+AGG | + | chr8_2:8201643-8201662 | None:intergenic | 60.0% | |
| TTCGTGGCCTTCGGCGAGTA+TGG | + | chr8_2:8201710-8201729 | None:intergenic | 60.0% | |
| GAAGGGGGTTGGAAGTAGGC+TGG | - | chr8_2:8205823-8205842 | Msa1231930:intron | 60.0% | |
| !! | TCTTGGTGGCGAGCTTCGCA+TGG | - | chr8_2:8206554-8206573 | Msa1231930:intron | 60.0% |
| GTTGGCGGGGATCCTGGTGT+TGG | - | chr8_2:8201531-8201550 | Msa1231930:intron | 65.0% | |
| CTCGCCGAAGGCCACGAAGA+TGG | - | chr8_2:8201712-8201731 | Msa1231930:intron | 65.0% | |
| TGGAGGGCGGAGCCCTTTGC+TGG | - | chr8_2:8200422-8200441 | Msa1231930:intron | 70.0% | |
| GGGCGGAGCCCTTTGCTGGA+CGG | - | chr8_2:8200426-8200445 | Msa1231930:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 8199562 | 8207609 | 8199562 | ID=Msa1231930;Name=Msa1231930 |
| chr8_2 | mRNA | 8199562 | 8207609 | 8199562 | ID=Msa1231930-mRNA-1;Parent=Msa1231930;Name=Msa1231930-mRNA-1;_AED=0.20;_eAED=0.20;_QI=40|0.81|0.82|0.94|0.93|0.94|17|0|603 |
| chr8_2 | exon | 8199562 | 8199646 | 8199562 | ID=Msa1231930-mRNA-1:exon:3195;Parent=Msa1231930-mRNA-1 |
| chr8_2 | exon | 8199866 | 8200047 | 8199866 | ID=Msa1231930-mRNA-1:exon:3194;Parent=Msa1231930-mRNA-1 |
| chr8_2 | exon | 8200596 | 8200668 | 8200596 | ID=Msa1231930-mRNA-1:exon:3193;Parent=Msa1231930-mRNA-1 |
| chr8_2 | exon | 8201424 | 8201506 | 8201424 | ID=Msa1231930-mRNA-1:exon:3192;Parent=Msa1231930-mRNA-1 |
| chr8_2 | exon | 8202350 | 8202388 | 8202350 | ID=Msa1231930-mRNA-1:exon:3191;Parent=Msa1231930-mRNA-1 |
| chr8_2 | exon | 8202511 | 8202588 | 8202511 | ID=Msa1231930-mRNA-1:exon:3190;Parent=Msa1231930-mRNA-1 |
| chr8_2 | exon | 8203021 | 8203176 | 8203021 | ID=Msa1231930-mRNA-1:exon:3189;Parent=Msa1231930-mRNA-1 |
| chr8_2 | exon | 8203267 | 8203332 | 8203267 | ID=Msa1231930-mRNA-1:exon:3188;Parent=Msa1231930-mRNA-1 |
| chr8_2 | exon | 8203664 | 8203708 | 8203664 | ID=Msa1231930-mRNA-1:exon:3187;Parent=Msa1231930-mRNA-1 |
| chr8_2 | exon | 8204210 | 8204290 | 8204210 | ID=Msa1231930-mRNA-1:exon:3186;Parent=Msa1231930-mRNA-1 |
| chr8_2 | exon | 8204533 | 8204595 | 8204533 | ID=Msa1231930-mRNA-1:exon:3185;Parent=Msa1231930-mRNA-1 |
| chr8_2 | exon | 8204918 | 8205025 | 8204918 | ID=Msa1231930-mRNA-1:exon:3184;Parent=Msa1231930-mRNA-1 |
| chr8_2 | exon | 8205180 | 8205260 | 8205180 | ID=Msa1231930-mRNA-1:exon:3183;Parent=Msa1231930-mRNA-1 |
| chr8_2 | exon | 8205400 | 8205471 | 8205400 | ID=Msa1231930-mRNA-1:exon:3182;Parent=Msa1231930-mRNA-1 |
| chr8_2 | exon | 8205596 | 8205654 | 8205596 | ID=Msa1231930-mRNA-1:exon:3181;Parent=Msa1231930-mRNA-1 |
| chr8_2 | exon | 8206325 | 8206380 | 8206325 | ID=Msa1231930-mRNA-1:exon:3180;Parent=Msa1231930-mRNA-1 |
| chr8_2 | exon | 8207085 | 8207609 | 8207085 | ID=Msa1231930-mRNA-1:exon:3179;Parent=Msa1231930-mRNA-1 |
| chr8_2 | five_prime_UTR | 8207570 | 8207609 | 8207570 | ID=Msa1231930-mRNA-1:five_prime_utr;Parent=Msa1231930-mRNA-1 |
| chr8_2 | CDS | 8207085 | 8207569 | 8207085 | ID=Msa1231930-mRNA-1:cds;Parent=Msa1231930-mRNA-1 |
| chr8_2 | CDS | 8206325 | 8206380 | 8206325 | ID=Msa1231930-mRNA-1:cds;Parent=Msa1231930-mRNA-1 |
| chr8_2 | CDS | 8205596 | 8205654 | 8205596 | ID=Msa1231930-mRNA-1:cds;Parent=Msa1231930-mRNA-1 |
| chr8_2 | CDS | 8205400 | 8205471 | 8205400 | ID=Msa1231930-mRNA-1:cds;Parent=Msa1231930-mRNA-1 |
| chr8_2 | CDS | 8205180 | 8205260 | 8205180 | ID=Msa1231930-mRNA-1:cds;Parent=Msa1231930-mRNA-1 |
| chr8_2 | CDS | 8204918 | 8205025 | 8204918 | ID=Msa1231930-mRNA-1:cds;Parent=Msa1231930-mRNA-1 |
| chr8_2 | CDS | 8204533 | 8204595 | 8204533 | ID=Msa1231930-mRNA-1:cds;Parent=Msa1231930-mRNA-1 |
| chr8_2 | CDS | 8204210 | 8204290 | 8204210 | ID=Msa1231930-mRNA-1:cds;Parent=Msa1231930-mRNA-1 |
| chr8_2 | CDS | 8203664 | 8203708 | 8203664 | ID=Msa1231930-mRNA-1:cds;Parent=Msa1231930-mRNA-1 |
| chr8_2 | CDS | 8203267 | 8203332 | 8203267 | ID=Msa1231930-mRNA-1:cds;Parent=Msa1231930-mRNA-1 |
| chr8_2 | CDS | 8203021 | 8203176 | 8203021 | ID=Msa1231930-mRNA-1:cds;Parent=Msa1231930-mRNA-1 |
| chr8_2 | CDS | 8202511 | 8202588 | 8202511 | ID=Msa1231930-mRNA-1:cds;Parent=Msa1231930-mRNA-1 |
| chr8_2 | CDS | 8202350 | 8202388 | 8202350 | ID=Msa1231930-mRNA-1:cds;Parent=Msa1231930-mRNA-1 |
| chr8_2 | CDS | 8201424 | 8201506 | 8201424 | ID=Msa1231930-mRNA-1:cds;Parent=Msa1231930-mRNA-1 |
| chr8_2 | CDS | 8200596 | 8200668 | 8200596 | ID=Msa1231930-mRNA-1:cds;Parent=Msa1231930-mRNA-1 |
| chr8_2 | CDS | 8199866 | 8200047 | 8199866 | ID=Msa1231930-mRNA-1:cds;Parent=Msa1231930-mRNA-1 |
| chr8_2 | CDS | 8199562 | 8199646 | 8199562 | ID=Msa1231930-mRNA-1:cds;Parent=Msa1231930-mRNA-1 |
| Gene Sequence |
| Protein sequence |
