AlfalfaGEDB | Msa1459390

M. sativa cultivar zhongmu-4 / Msa1459390

KEGG: K20241
GO: GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0005829 GO:0010008 GO:0012505 GO:0016020 GO:0031090 GO:0031410 GO:0031982 GO:0031984 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0048471 GO:0097708 GO:0098588 GO:0098791 GO:0098805
PFAM: PF00400.35

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1459390	XP_024628045.1	96.752	431	14	0	1	431	149	579	0.0	867

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1459390	sp\|Q6LA54\|YF48_SCHPO	37.809	283	154	4	19	281	319	599	7.00e-54	196

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1459390	A0A0C3Y5Y4	96.752	431	14	0	1	431	215	645	0.0	865

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0008830	Msa1459390	0.803355	3.626833e-49	-8.615850e-47
Msa0011850	Msa1459390	0.819562	1.087891e-52	-8.615850e-47
Msa0018220	Msa1459390	0.816646	4.968257e-52	-8.615850e-47
Msa0024680	Msa1459390	0.826756	2.277732e-54	-8.615850e-47
Msa0029540	Msa1459390	-0.818736	1.677825e-52	-8.615850e-47
Msa0030590	Msa1459390	0.808208	3.466818e-50	-8.615850e-47
Msa0032370	Msa1459390	0.810804	9.606970e-51	-8.615850e-47
Msa0032840	Msa1459390	-0.816131	6.475949e-52	-8.615850e-47
Msa0036430	Msa1459390	0.807849	4.135102e-50	-8.615850e-47
Msa0051230	Msa1459390	-0.857123	2.022486e-62	-8.615850e-47
Msa0051430	Msa1459390	-0.877719	5.015403e-69	-8.615850e-47
Msa0052020	Msa1459390	0.804642	1.958469e-49	-8.615850e-47
Msa0052460	Msa1459390	0.823778	1.153166e-53	-8.615850e-47
Msa0094420	Msa1459390	0.812288	4.571316e-51	-8.615850e-47
Msa0096670	Msa1459390	0.817834	2.684363e-52	-8.615850e-47
Msa0097050	Msa1459390	0.818641	1.762738e-52	-8.615850e-47
Msa0098430	Msa1459390	0.800283	1.549956e-48	-8.615850e-47
Msa0101810	Msa1459390	-0.804440	2.157712e-49	-8.615850e-47
Msa0105420	Msa1459390	0.836703	8.010810e-57	-8.615850e-47
Msa0114540	Msa1459390	-0.839228	1.796667e-57	-8.615850e-47
Msa0115830	Msa1459390	0.800751	1.244154e-48	-8.615850e-47
Msa0120330	Msa1459390	0.820659	6.103940e-53	-8.615850e-47
Msa1360890	Msa1459390	-0.833043	6.690788e-56	-8.615850e-47
Msa1362510	Msa1459390	0.828560	8.400280e-55	-8.615850e-47
Msa1364470	Msa1459390	-0.826999	1.992793e-54	-8.615850e-47
Msa1367940	Msa1459390	0.816654	4.945900e-52	-8.615850e-47
Msa1377100	Msa1459390	-0.862646	4.372376e-64	-8.615850e-47
Msa1390310	Msa1459390	0.844444	7.531013e-59	-8.615850e-47
Msa1398860	Msa1459390	0.861846	7.696798e-64	-8.615850e-47
Msa1429360	Msa1459390	-0.842122	3.136405e-58	-8.615850e-47
Msa1442220	Msa1459390	-0.829197	5.889821e-55	-8.615850e-47
Msa1442300	Msa1459390	0.819607	1.062463e-52	-8.615850e-47
Msa1445790	Msa1459390	0.803122	4.053250e-49	-8.615850e-47
Msa1458390	Msa1459390	-0.802490	5.472867e-49	-8.615850e-47
Msa1459390	Msa1465900	0.803300	3.722929e-49	-8.615850e-47
Msa0604360	Msa1459390	0.817783	2.756671e-52	-8.615850e-47
Msa0642650	Msa1459390	0.810042	1.403420e-50	-8.615850e-47
Msa0648520	Msa1459390	0.801228	9.942536e-49	-8.615850e-47
Msa0681890	Msa1459390	0.811666	6.245351e-51	-8.615850e-47
Msa0691050	Msa1459390	0.801600	8.342916e-49	-8.615850e-47
Msa0702590	Msa1459390	0.800606	1.331824e-48	-8.615850e-47
Msa0705430	Msa1459390	0.881892	1.645267e-70	-8.615850e-47
Msa0730270	Msa1459390	0.805428	1.341113e-49	-8.615850e-47
Msa0740420	Msa1459390	0.817122	3.884427e-52	-8.615850e-47
Msa0743680	Msa1459390	0.833929	4.020334e-56	-8.615850e-47
Msa0754720	Msa1459390	-0.848997	4.289684e-60	-8.615850e-47
Msa0756630	Msa1459390	-0.835762	1.389063e-56	-8.615850e-47
Msa0761580	Msa1459390	0.818726	1.686465e-52	-8.615850e-47
Msa0784620	Msa1459390	0.852472	4.513284e-61	-8.615850e-47
Msa0802470	Msa1459390	-0.802248	6.138579e-49	-8.615850e-47
Msa0820670	Msa1459390	0.817798	2.735502e-52	-8.615850e-47
Msa0822990	Msa1459390	0.802197	6.289185e-49	-8.615850e-47
Msa0824730	Msa1459390	0.822963	1.788328e-53	-8.615850e-47
Msa0829620	Msa1459390	0.805082	1.585169e-49	-8.615850e-47
Msa0128370	Msa1459390	0.804763	1.847666e-49	-8.615850e-47
Msa0138970	Msa1459390	-0.826523	2.588774e-54	-8.615850e-47
Msa0139900	Msa1459390	0.802644	5.087259e-49	-8.615850e-47
Msa0142470	Msa1459390	0.973678	7.752206e-137	-8.615850e-47
Msa0145980	Msa1459390	-0.844858	5.825349e-59	-8.615850e-47
Msa0172350	Msa1459390	0.842187	3.013587e-58	-8.615850e-47
Msa0174560	Msa1459390	0.801020	1.096655e-48	-8.615850e-47
Msa0175850	Msa1459390	-0.802795	4.735992e-49	-8.615850e-47
Msa0189950	Msa1459390	0.833471	5.234151e-56	-8.615850e-47
Msa0190830	Msa1459390	0.813223	2.853481e-51	-8.615850e-47
Msa0193650	Msa1459390	0.809162	2.168458e-50	-8.615850e-47
Msa0222920	Msa1459390	0.825517	4.489160e-54	-8.615850e-47
Msa0227510	Msa1459390	0.827134	1.850553e-54	-8.615850e-47
Msa0230550	Msa1459390	-0.809435	1.895034e-50	-8.615850e-47
Msa0233190	Msa1459390	0.804645	1.955549e-49	-8.615850e-47
Msa1224830	Msa1459390	0.805016	1.636216e-49	-8.615850e-47
Msa1224840	Msa1459390	0.802207	6.260793e-49	-8.615850e-47
Msa1231930	Msa1459390	0.813770	2.163476e-51	-8.615850e-47
Msa1237030	Msa1459390	0.803882	2.818988e-49	-8.615850e-47
Msa1246530	Msa1459390	-0.808172	3.529430e-50	-8.615850e-47
Msa1249920	Msa1459390	0.800170	1.634386e-48	-8.615850e-47
Msa1254770	Msa1459390	0.808708	2.712624e-50	-8.615850e-47
Msa1254800	Msa1459390	0.803126	4.044384e-49	-8.615850e-47
Msa1269580	Msa1459390	-0.844453	7.489972e-59	-8.615850e-47
Msa1337730	Msa1459390	0.832189	1.089395e-55	-8.615850e-47
Msa0371610	Msa1459390	0.806512	7.933555e-50	-8.615850e-47
Msa0380920	Msa1459390	0.809597	1.749179e-50	-8.615850e-47
Msa0393680	Msa1459390	0.810567	1.081208e-50	-8.615850e-47
Msa0398060	Msa1459390	0.806480	8.061477e-50	-8.615850e-47
Msa0414950	Msa1459390	-0.810982	8.789903e-51	-8.615850e-47
Msa0423360	Msa1459390	-0.835019	2.141243e-56	-8.615850e-47
Msa0429520	Msa1459390	-0.848212	7.076687e-60	-8.615850e-47
Msa0429530	Msa1459390	-0.811036	8.558105e-51	-8.615850e-47
Msa0430820	Msa1459390	0.815011	1.150007e-51	-8.615850e-47
Msa0436280	Msa1459390	-0.844817	5.975453e-59	-8.615850e-47
Msa0467920	Msa1459390	-0.819122	1.371099e-52	-8.615850e-47
Msa0469910	Msa1459390	-0.841237	5.366579e-58	-8.615850e-47
Msa0990520	Msa1459390	0.803426	3.506810e-49	-8.615850e-47
Msa0996080	Msa1459390	0.801255	9.816362e-49	-8.615850e-47
Msa1008490	Msa1459390	0.808010	3.819990e-50	-8.615850e-47
Msa1009000	Msa1459390	0.808741	2.668687e-50	-8.615850e-47
Msa1012810	Msa1459390	0.800877	1.172656e-48	-8.615850e-47
Msa1014270	Msa1459390	0.809174	2.155362e-50	-8.615850e-47
Msa1015060	Msa1459390	0.803088	4.118255e-49	-8.615850e-47
Msa1020710	Msa1459390	0.831091	2.031183e-55	-8.615850e-47
Msa1040120	Msa1459390	0.838127	3.459257e-57	-8.615850e-47
Msa1044340	Msa1459390	0.816268	6.036912e-52	-8.615850e-47
Msa1055260	Msa1459390	0.806332	8.659724e-50	-8.615850e-47
Msa1099030	Msa1459390	0.803555	3.295981e-49	-8.615850e-47
Msa0259560	Msa1459390	0.808624	2.825972e-50	-8.615850e-47
Msa0260820	Msa1459390	-0.808770	2.630598e-50	-8.615850e-47
Msa0264350	Msa1459390	0.845606	3.655846e-59	-8.615850e-47
Msa0266000	Msa1459390	-0.810135	1.340133e-50	-8.615850e-47
Msa0267760	Msa1459390	0.840408	8.855291e-58	-8.615850e-47
Msa0275400	Msa1459390	-0.830461	2.898241e-55	-8.615850e-47
Msa0280900	Msa1459390	0.801115	1.048210e-48	-8.615850e-47
Msa0282850	Msa1459390	0.843358	1.472150e-58	-8.615850e-47
Msa0302450	Msa1459390	0.839033	2.018121e-57	-8.615850e-47
Msa0311580	Msa1459390	0.806672	7.340744e-50	-8.615850e-47
Msa0312750	Msa1459390	-0.809703	1.659888e-50	-8.615850e-47
Msa0315150	Msa1459390	0.816985	4.170506e-52	-8.615850e-47
Msa0315480	Msa1459390	0.805756	1.144572e-49	-8.615850e-47
Msa0356890	Msa1459390	-0.812162	4.869765e-51	-8.615850e-47
Msa1143620	Msa1459390	0.969881	8.870895e-131	-8.615850e-47
Msa1149760	Msa1459390	0.816063	6.706996e-52	-8.615850e-47
Msa1167400	Msa1459390	0.835873	1.302270e-56	-8.615850e-47
Msa1193950	Msa1459390	-0.804267	2.344515e-49	-8.615850e-47
Msa1215460	Msa1459390	0.850692	1.440442e-60	-8.615850e-47
Msa1221900	Msa1459390	0.820007	8.609712e-53	-8.615850e-47
Msa0526700	Msa1459390	0.805785	1.128909e-49	-8.615850e-47
Msa0526710	Msa1459390	0.834685	2.597877e-56	-8.615850e-47
Msa0546380	Msa1459390	0.802970	4.357105e-49	-8.615850e-47
Msa0569020	Msa1459390	0.955389	3.395698e-113	-8.615850e-47
Msa0575250	Msa1459390	0.808569	2.903824e-50	-8.615850e-47
Msa0601710	Msa1459390	0.806587	7.650749e-50	-8.615850e-47
Msa0849330	Msa1459390	0.828642	8.026316e-55	-8.615850e-47
Msa0863800	Msa1459390	0.840901	6.574677e-58	-8.615850e-47
Msa0881480	Msa1459390	0.832807	7.657316e-56	-8.615850e-47
Msa0890250	Msa1459390	0.806853	6.721353e-50	-8.615850e-47
Msa0907700	Msa1459390	0.809300	2.025196e-50	-8.615850e-47
Msa0938430	Msa1459390	0.819386	1.193631e-52	-8.615850e-47
Msa0947530	Msa1459390	-0.806762	7.028055e-50	-8.615850e-47
Msa0959010	Msa1459390	0.808768	2.633048e-50	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1459390	MtrunA17_Chr8g0384061	96.752	431	14	0	1	431	215	645	0.0	865
Msa1459390	MtrunA17_Chr3g0129821	65.646	457	122	6	2	431	180	628	0.0	551
Msa1459390	MtrunA17_Chr1g0146771	41.260	492	200	10	2	431	245	709	7.31e-122	370
Msa1459390	MtrunA17_Chr3g0127171	44.025	477	208	10	2	429	234	700	1.34e-121	369
Msa1459390	MtrunA17_Chr8g0388841	39.579	475	229	7	2	431	253	714	6.00e-109	337
Msa1459390	MtrunA17_Chr2g0317931	35.630	508	238	8	2	431	362	858	3.41e-91	294
Msa1459390	MtrunA17_Chr7g0238321	32.902	541	246	7	2	431	405	939	9.91e-82	270
Msa1459390	MtrunA17_Chr4g0067151	27.273	286	179	9	8	285	19	283	3.89e-26	107
Msa1459390	MtrunA17_Chr1g0185501	24.911	281	171	10	10	281	21	270	1.10e-18	86.7
Msa1459390	MtrunA17_Chr3g0136971	26.554	177	107	6	13	186	458	614	1.16e-13	73.2
Msa1459390	MtrunA17_Chr8g0352351	22.000	250	176	6	62	293	208	456	2.06e-11	65.9
Msa1459390	MtrunA17_Chr3g0099061	23.358	274	180	11	23	285	221	475	5.36e-11	64.3

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1459390	AT1G48870.2	44.170	446	193	9	1	428	183	590	1.53e-118	358
Msa1459390	AT1G48870.3	44.170	446	193	9	1	428	183	590	1.53e-118	358
Msa1459390	AT1G48870.1	44.170	446	193	9	1	428	183	590	1.53e-118	358
Msa1459390	AT5G53500.2	41.684	475	201	12	2	429	207	652	4.96e-110	338
Msa1459390	AT5G53500.1	41.684	475	201	12	2	429	207	652	4.96e-110	338
Msa1459390	AT5G24320.1	39.583	480	214	9	2	429	237	692	5.47e-109	337
Msa1459390	AT5G24320.2	39.256	484	214	10	2	429	237	696	2.72e-107	332
Msa1459390	AT5G42010.1	39.200	500	201	14	2	431	243	709	2.76e-100	314
Msa1459390	AT1G64610.2	39.832	477	207	12	2	431	204	647	6.80e-100	311
Msa1459390	AT1G64610.1	39.832	477	207	12	2	431	204	647	6.80e-100	311
Msa1459390	AT3G15470.1	37.980	495	232	10	2	431	399	883	6.59e-96	307
Msa1459390	AT5G54200.1	38.017	484	239	10	2	431	349	825	4.98e-92	295
Msa1459390	AT5G42010.2	43.607	305	126	2	2	260	243	547	3.29e-79	256
Msa1459390	AT5G02430.1	34.714	507	249	9	2	431	397	898	1.74e-78	261
Msa1459390	AT2G37670.1	39.155	355	171	4	2	314	390	741	2.90e-74	249
Msa1459390	AT2G37670.2	39.155	355	171	4	2	314	391	742	3.00e-74	249
Msa1459390	AT3G49660.1	25.086	291	185	9	3	285	11	276	1.34e-22	98.2
Msa1459390	AT4G02730.1	27.660	282	163	11	10	281	37	287	1.72e-19	89.4
Msa1459390	AT2G43770.1	24.731	279	173	9	12	280	49	300	1.85e-16	80.9
Msa1459390	AT2G16405.1	31.356	118	80	1	66	182	205	322	1.00e-12	70.1
Msa1459390	AT5G25150.1	27.684	177	105	6	13	186	457	613	1.17e-12	70.5
Msa1459390	AT5G25150.2	27.684	177	105	6	13	186	457	613	1.18e-12	70.5

Find 162 sgRNAs with CRISPR-Local

Find 526 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCGATCCAATATGCAGATTT+TGG	0.140444	tig0040221:+4098	Msa1459390:intergenic
ATCAAGACATTCCACAATTT+TGG	0.147050	tig0040221:-3325	Msa1459390:CDS
GTGAGGCAAAAGAAGAATTT+TGG	0.149020	tig0040221:-5550	Msa1459390:five_prime_UTR
TAATAAGTTGCTTAGAATTT+TGG	0.155363	tig0040221:-3190	Msa1459390:three_prime_UTR
TCACCTTCTGGTAAAGTATC+TGG	0.167154	tig0040221:-5692	Msa1459390:five_prime_UTR
AGGACTCGCGCGTGTATATT+TGG	0.192771	tig0040221:-3765	Msa1459390:CDS
CAGTCCCAATGGTCAGTATT+TGG	0.195556	tig0040221:-5307	Msa1459390:CDS
TTTGTAGTTGGTTCTCTTAC+AGG	0.204905	tig0040221:-4484	Msa1459390:CDS
AGAGTAAGTGGTTAATTAAT+TGG	0.226469	tig0040221:+2891	Msa1459390:intergenic
TTGATGGTAAAGTTCGAATA+TGG	0.250806	tig0040221:-4710	Msa1459390:CDS
TGGCTTGCCTGTTAGGCTTT+AGG	0.253307	tig0040221:-3305	Msa1459390:exon
GCCTTCAATGTCGTGAATTT+AGG	0.264692	tig0040221:-3048	Msa1459390:three_prime_UTR
CAACAAGATTACTGGCATTC+AGG	0.268264	tig0040221:-4283	Msa1459390:intron
TCTTGTTGGAAGATCTTAAA+AGG	0.284736	tig0040221:-5625	Msa1459390:five_prime_UTR
TAAAATTCCTCTCTAGAAAA+AGG	0.287150	tig0040221:-6566	Msa1459390:five_prime_UTR
TTCCAGTGATATCTTGGATT+TGG	0.289851	tig0040221:-5151	Msa1459390:CDS
TAATTCTCTGACAGTTGTTT+TGG	0.290037	tig0040221:+4139	Msa1459390:intergenic
CTTCTTTCCTTCACACTAAT+AGG	0.297940	tig0040221:+5863	Msa1459390:intergenic
GGTAATTGGTTCTTCATTGA+TGG	0.304868	tig0040221:-3526	Msa1459390:CDS
CTTATTATACTTAGAATCTA+AGG	0.306553	tig0040221:+3206	Msa1459390:intergenic
AATGCAAGCATTTCACCTTC+TGG	0.331414	tig0040221:-5704	Msa1459390:five_prime_UTR
TCGATAATGGTAAAGCTAAT+AGG	0.334017	tig0040221:-5523	Msa1459390:five_prime_UTR
TTATTGACTGGGCAGATATA+CGG	0.336332	tig0040221:-4668	Msa1459390:CDS
GATTTGTATATTTACACTTT+AGG	0.337337	tig0040221:-3074	Msa1459390:three_prime_UTR
GATGACTGGTCGGTCACATT+GGG	0.337398	tig0040221:-5764	Msa1459390:five_prime_UTR
GCATATTCATTCATGGCTTA+AGG	0.339710	tig0040221:+6900	Msa1459390:intergenic
TCTTTACTCTATGGTCTGTT+AGG	0.339958	tig0040221:+6940	Msa1459390:intergenic
GAGCTATGCATATTCATTCA+TGG	0.343670	tig0040221:+6893	Msa1459390:intergenic
GAGCTCACAAAGGACTAATA+TGG	0.353947	tig0040221:-5341	Msa1459390:CDS
TATTCGAACTTTACCATCAA+TGG	0.358267	tig0040221:+4713	Msa1459390:intergenic
AGCGATAACTCTTTACTCTA+TGG	0.371177	tig0040221:+6931	Msa1459390:intergenic
ATTTAGCTTACACTTCTTCC+AGG	0.372892	tig0040221:-5817	Msa1459390:five_prime_UTR
TTTATCAGTGGATCCATTGA+TGG	0.375545	tig0040221:-4726	Msa1459390:CDS
TAATTGGTGAGAGAGATATT+TGG	0.377259	tig0040221:-6144	Msa1459390:five_prime_UTR
TTCTGAAGCTGAAGTCTTGT+TGG	0.380038	tig0040221:-5639	Msa1459390:five_prime_UTR
TGATCTATTCTATGACTCAT+TGG	0.384024	tig0040221:-5981	Msa1459390:five_prime_UTR
ATCAACTAACAAAATGTTAG+AGG	0.387196	tig0040221:+2989	Msa1459390:intergenic
AGATTCCAAAATCTGCATAT+TGG	0.388192	tig0040221:-4103	Msa1459390:CDS
GATTAAATATGTGATTTGTA+TGG	0.392101	tig0040221:-2925	Msa1459390:three_prime_UTR
ACTCTACTACACTATTAGTT+AGG	0.394557	tig0040221:+6800	Msa1459390:intergenic
TGGTCATTCCAGTGATATCT+TGG	0.395337	tig0040221:-5157	Msa1459390:CDS
TAATAGTGTAGTAGAGTAAC+TGG	0.396285	tig0040221:-6794	Msa1459390:intron
GCATTAGGCAACAAGATTAC+TGG	0.396820	tig0040221:-4291	Msa1459390:CDS
GCATTGTCCTAAAGCCTAAC+AGG	0.399732	tig0040221:+3298	Msa1459390:intergenic
TCAAGTTCTTGACAAATTCC+AGG	0.401016	tig0040221:-3096	Msa1459390:three_prime_UTR
TCGCCACTTCAAGAATTGTT+TGG	0.405306	tig0040221:-5177	Msa1459390:CDS
TCTGGGAAGTTGGTTCTCTC+TGG	0.410316	tig0040221:-5674	Msa1459390:five_prime_UTR
TTCAGAACCAAACCCTTCTT+CGG	0.411107	tig0040221:+5928	Msa1459390:intergenic
GATTTGGATTTACAATTTCA+AGG	0.415822	tig0040221:-6115	Msa1459390:five_prime_UTR
CATGGAAAGAAGAAAGCATT+AGG	0.419424	tig0040221:-4306	Msa1459390:CDS
CCCACTTGATGTAAATGAAC+CGG	0.420329	tig0040221:+3810	Msa1459390:intergenic
AAGTGTAAATATACAAATCC+TGG	0.424976	tig0040221:+3078	Msa1459390:intergenic
TGGATAAAACTGTTCGCGCT+TGG	0.427183	tig0040221:-4992	Msa1459390:CDS
CATGTGCAGGGATTTGTAGT+TGG	0.427358	tig0040221:-4496	Msa1459390:intron
CTAATGCTTTCTTCTTTCCA+TGG	0.431274	tig0040221:+4307	Msa1459390:intergenic
TGCAACAGTTACGCCCTTGA+AGG	0.436499	tig0040221:+3675	Msa1459390:intergenic
GATTCTTCTTTCGTCTTCGA+TGG	0.446992	tig0040221:-5012	Msa1459390:CDS
CAAATCAAACCTAGAGTAAG+TGG	0.447205	tig0040221:+2879	Msa1459390:intergenic
ATGGTCTGTTAGGTGGTCAT+AGG	0.451535	tig0040221:+6950	Msa1459390:intergenic
CACCTTCTGGTAAAGTATCT+GGG	0.458891	tig0040221:-5691	Msa1459390:five_prime_UTR
TCCGGTTCATTTACATCAAG+TGG	0.463250	tig0040221:-3811	Msa1459390:CDS
TGAGAAGCATTGATGGCTAA+TGG	0.463686	tig0040221:+6843	Msa1459390:intergenic
TGATGGTAAAGTTCGAATAT+GGG	0.463939	tig0040221:-4709	Msa1459390:CDS
GTGATATCTTGGATTTGGCC+TGG	0.468041	tig0040221:-5146	Msa1459390:CDS
AAGATGGCGTTGTGCGCATA+TGG	0.468274	tig0040221:-5272	Msa1459390:CDS
TGATGACTGGTCGGTCACAT+TGG	0.471379	tig0040221:-5765	Msa1459390:five_prime_UTR
ATTAATTAACCACTTACTCT+AGG	0.471804	tig0040221:-2888	None:intergenic
CTCAGAAGTAACCTCTAGCT+TGG	0.473947	tig0040221:+3576	Msa1459390:intergenic
TGTTTACCTCTGCATATGCT+TGG	0.476404	tig0040221:+6523	Msa1459390:intergenic
TTCAAGGCGTTGAAAAGTAG+TGG	0.478516	tig0040221:-6099	Msa1459390:five_prime_UTR
CAAGAACTTGACATCCATCA+TGG	0.481303	tig0040221:+3108	Msa1459390:intergenic
CATGTTGGAAGTTTCTCCTC+AGG	0.483782	tig0040221:+3472	Msa1459390:intergenic
CTATCAGGCCTTCCATGGTC+AGG	0.488291	tig0040221:-3844	Msa1459390:intron
GGGAAACATATCATTTCAGT+TGG	0.490890	tig0040221:-3790	Msa1459390:CDS
AGTGGATTGAAGTGGTAAAG+TGG	0.491768	tig0040221:-6081	Msa1459390:five_prime_UTR
TATTTATCTGCGCCTCAAGC+TGG	0.494606	tig0040221:+4331	Msa1459390:intergenic
TCGTTCTATCAGGCCTTCCA+TGG	0.502364	tig0040221:-3849	Msa1459390:intron
TGGTTATATCATCTGCGTAC+AGG	0.505824	tig0040221:-3148	Msa1459390:three_prime_UTR
TTCATTGATGGTACATGTCG+AGG	0.508863	tig0040221:-3514	Msa1459390:CDS
CTAGCCAAATACTGACCATT+GGG	0.509035	tig0040221:+5303	Msa1459390:intergenic
AACTTCAATGACTTCAAAAG+TGG	0.509136	tig0040221:-3742	Msa1459390:CDS
TATTGACTGGGCAGATATAC+GGG	0.510784	tig0040221:-4667	Msa1459390:CDS
TTGGCTAGTGGAGGTGAAGA+TGG	0.511823	tig0040221:-5288	Msa1459390:CDS
TTACTCTATGGTCTGTTAGG+TGG	0.513137	tig0040221:+6943	Msa1459390:intergenic
GCTATAAGTTATCAACAAGA+TGG	0.514520	tig0040221:-4633	Msa1459390:CDS
GTGGATTGAAGTGGTAAAGT+GGG	0.514543	tig0040221:-6080	Msa1459390:five_prime_UTR
GGAAGTTGGTTCTCTCTGGA+TGG	0.518254	tig0040221:-5670	Msa1459390:five_prime_UTR
GCCTAAATTCACGACATTGA+AGG	0.519406	tig0040221:+3047	Msa1459390:intergenic
ATGTCGTGAATTTAGGCCAC+AGG	0.520700	tig0040221:-3041	Msa1459390:three_prime_UTR
ATAGTAGCAGCTGGCAGTGA+TGG	0.524175	tig0040221:-3352	Msa1459390:CDS
CTATTAGTGTGAAGGAAAGA+AGG	0.531509	tig0040221:-5862	Msa1459390:five_prime_UTR
AATCATTGTCAAATCCATGA+TGG	0.532182	tig0040221:-3122	Msa1459390:three_prime_UTR
TGGTAAAGTATCTGGGAAGT+TGG	0.533172	tig0040221:-5684	Msa1459390:five_prime_UTR
ACTAGCCAAATACTGACCAT+TGG	0.537399	tig0040221:+5302	Msa1459390:intergenic
GTGAAGAACGAGTTATTGAC+TGG	0.539351	tig0040221:-4680	Msa1459390:CDS
ATCATTTGGAAGGGAAACAA+AGG	0.543245	tig0040221:+5218	Msa1459390:intergenic
TTTCTCTTGTGAACAAACCC+TGG	0.543560	tig0040221:+5799	Msa1459390:intergenic
AGGAAAATATTTCCAGCTTG+AGG	0.544685	tig0040221:-4343	Msa1459390:CDS
TGTCACGAAGATAGTAGCTA+TGG	0.545197	tig0040221:-3406	Msa1459390:CDS
GAGAGGATCGTGGCAAGCAG+TGG	0.545339	tig0040221:-5737	Msa1459390:five_prime_UTR
TTTAGCTTACACTTCTTCCA+GGG	0.546525	tig0040221:-5816	Msa1459390:five_prime_UTR
TGGTCAGGAAGTCAGATGTC+CGG	0.560460	tig0040221:-3829	Msa1459390:CDS
GGGTTTGGTTCTGAAAGGAG+AGG	0.560825	tig0040221:-5920	Msa1459390:five_prime_UTR
AATGAAAATTACTTTATCAG+TGG	0.560882	tig0040221:-4738	Msa1459390:CDS
GGCCAAATCCAAGATATCAC+TGG	0.565834	tig0040221:+5149	Msa1459390:intergenic
CTGAGGAGAAACTTCCAACA+TGG	0.568255	tig0040221:-3471	Msa1459390:CDS
TATTAGTGTGAAGGAAAGAA+GGG	0.568848	tig0040221:-5861	Msa1459390:five_prime_UTR
CAAGAGCACAGACAGAGAGA+AGG	0.571987	tig0040221:-5572	Msa1459390:five_prime_UTR
AAGAAGGGTTTGGTTCTGAA+AGG	0.572573	tig0040221:-5925	Msa1459390:five_prime_UTR
AAGGAATATATCAGAAACAT+GGG	0.572905	tig0040221:-3383	Msa1459390:CDS
GAAGGGAAACAAAGGGAGGA+CGG	0.573342	tig0040221:+5226	Msa1459390:intergenic
CAAGCTAGAGGTTACTTCTG+AGG	0.574127	tig0040221:-3575	Msa1459390:CDS
TCTGACTTCCTGACCATGGA+AGG	0.577834	tig0040221:+3836	Msa1459390:intergenic
AATGGTCAGTATTTGGCTAG+TGG	0.581244	tig0040221:-5300	Msa1459390:CDS
GCACAGACAGAGAGAAGGTG+AGG	0.583206	tig0040221:-5567	Msa1459390:five_prime_UTR
AACATCAGGAAAGGCGACAA+AGG	0.583659	tig0040221:-5476	Msa1459390:five_prime_UTR
TCATTTGGAAGGGAAACAAA+GGG	0.585294	tig0040221:+5219	Msa1459390:intergenic
TACTTACCAAAGCCTTTGTG+AGG	0.587036	tig0040221:+4936	Msa1459390:intergenic
GAAGGAATATATCAGAAACA+TGG	0.587961	tig0040221:-3384	Msa1459390:CDS
GAATGAGCCTATTAGTGTGA+AGG	0.589021	tig0040221:-5870	Msa1459390:five_prime_UTR
ACATATCATTTCAGTTGGAG+AGG	0.592725	tig0040221:-3785	Msa1459390:CDS
TGACCAAACAATTCTTGAAG+TGG	0.593619	tig0040221:+5174	Msa1459390:intergenic
TTCCCAGATACTTTACCAGA+AGG	0.594322	tig0040221:+5689	Msa1459390:intergenic
ACAAGAGGTAAATCCCATGT+TGG	0.595289	tig0040221:+3457	Msa1459390:intergenic
AGGATTCTTTGCATGGCCTG+TGG	0.596299	tig0040221:+3025	Msa1459390:intergenic
CGGTCACATTGGGGTCGGAG+AGG	0.600622	tig0040221:-5754	Msa1459390:five_prime_UTR
ATGACTGGTCGGTCACATTG+GGG	0.606700	tig0040221:-5763	Msa1459390:five_prime_UTR
CTGGTCGGTCACATTGGGGT+CGG	0.607068	tig0040221:-5759	Msa1459390:five_prime_UTR
GCGTAACTGTTGCAATACCT+TGG	0.607882	tig0040221:-3666	Msa1459390:CDS
GAAGGTGGATTTGAAGCTTG+TGG	0.612799	tig0040221:-3168	Msa1459390:three_prime_UTR
AAGGCGGCGTGAGTATGAAG+TGG	0.612912	tig0040221:-5606	Msa1459390:five_prime_UTR
GAGTTCAGTGAGGTATACAT+TGG	0.614698	tig0040221:-5375	Msa1459390:CDS
TCACATTCATCTTCTACAAG+AGG	0.615378	tig0040221:+3442	Msa1459390:intergenic
TGTTAGTTGATTTATATACC+AGG	0.615971	tig0040221:-2977	Msa1459390:three_prime_UTR
GGTCTAACGATAGTAGCAGC+TGG	0.616322	tig0040221:-3361	Msa1459390:CDS
CCGGTTCATTTACATCAAGT+GGG	0.623114	tig0040221:-3810	Msa1459390:CDS
TACTTCTATGACATGGCCTG+AGG	0.623220	tig0040221:-3488	Msa1459390:CDS
TAACAGGCAAGCCAAAATTG+TGG	0.625636	tig0040221:+3314	Msa1459390:intergenic
ACTTACCAAAGCCTTTGTGA+GGG	0.626300	tig0040221:+4937	Msa1459390:intergenic
GACATCTGACTTCCTGACCA+TGG	0.626991	tig0040221:+3832	Msa1459390:intergenic
GATGGTAAAGTTCGAATATG+GGG	0.630516	tig0040221:-4708	Msa1459390:CDS
ACTATGAAATTCAGTCCCAA+TGG	0.634522	tig0040221:-5318	Msa1459390:CDS
GAGGCGCAGATAAATATCCA+TGG	0.635034	tig0040221:-4324	Msa1459390:CDS
GAATAAAACTCGTAGAGTGA+AGG	0.636114	tig0040221:-5424	Msa1459390:five_prime_UTR
ACGAAGATAGTAGCTATGGA+AGG	0.636891	tig0040221:-3402	Msa1459390:CDS
TGGTTACCAAGCATATGCAG+AGG	0.639701	tig0040221:-6529	Msa1459390:intron
TGAAAAGTAGTGGATTGAAG+TGG	0.641471	tig0040221:-6089	Msa1459390:five_prime_UTR
GAGATTGTTCAGAAATACAA+AGG	0.642821	tig0040221:-4072	Msa1459390:intron
ATTGGGGTCGGAGAGGATCG+TGG	0.644123	tig0040221:-5747	Msa1459390:five_prime_UTR
TGAGGAGAAACTTCCAACAT+GGG	0.648751	tig0040221:-3470	Msa1459390:CDS
GAGGTGGATGGAGTTCAGTG+AGG	0.649416	tig0040221:-5385	Msa1459390:exon
GGTCAGTATTTGGCTAGTGG+AGG	0.649574	tig0040221:-5297	Msa1459390:CDS
GAGGTTCTACTTCTATGACA+TGG	0.678336	tig0040221:-3495	Msa1459390:CDS
ACTCACATCTGAATTAGACC+AGG	0.684342	tig0040221:+5128	Msa1459390:intergenic
AAAATTGAAAACAATCAACA+TGG	0.686103	tig0040221:+3276	Msa1459390:intergenic
TGTTGGAAGATCTTAAAAGG+CGG	0.697921	tig0040221:-5622	Msa1459390:five_prime_UTR
CAAGAAATTAGAGCTCACAA+AGG	0.699622	tig0040221:-5351	Msa1459390:CDS
TGAAGAACGAGTTATTGACT+GGG	0.701967	tig0040221:-4679	Msa1459390:CDS
ACTGTTGCAATACCTTGGTG+TGG	0.716842	tig0040221:-3661	Msa1459390:CDS
AGGAATATATCAGAAACATG+GGG	0.726541	tig0040221:-3382	Msa1459390:CDS
TTTGGAAGGGAAACAAAGGG+AGG	0.738048	tig0040221:+5222	Msa1459390:intergenic
GGCATGAAAACAGATAGACG+TGG	0.825232	tig0040221:-3640	Msa1459390:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATTAATATGAGTATAAATCA+TGG	+	tig0040221:3172-3191	Msa1459390:intergenic	15.0%
!!	TATAATAATCTATAGTCTAT+TGG	-	tig0040221:3531-3550	Msa1459390:CDS	15.0%
!!	ATAATAATCTATAGTCTATT+GGG	-	tig0040221:3532-3551	Msa1459390:CDS	15.0%
!!!	TTTTGTTTATGATGAAATTT+GGG	-	tig0040221:3953-3972	Msa1459390:intron	15.0%
!!	TCAATTTGAAAAATATCATT+TGG	+	tig0040221:4646-4665	Msa1459390:intergenic	15.0%
!!!	AAATGATATTTTTCAAATTG+AGG	-	tig0040221:4645-4664	Msa1459390:CDS	15.0%
!!!	TTTAGAAACTATTTTATCTT+CGG	+	tig0040221:5465-5484	Msa1459390:intergenic	15.0%
!!	TTAGAGGATAAAAAAAAAAA+AGG	+	tig0040221:6845-6864	Msa1459390:intergenic	15.0%
!!	ATTAATATGAGTATAAATCA+TGG	+	tig0040221:3172-3191	Msa1459390:intergenic	15.0%
!!	TATAATAATCTATAGTCTAT+TGG	-	tig0040221:3531-3550	Msa1459390:CDS	15.0%
!!	ATAATAATCTATAGTCTATT+GGG	-	tig0040221:3532-3551	Msa1459390:CDS	15.0%
!!!	TTTTGTTTATGATGAAATTT+GGG	-	tig0040221:3953-3972	Msa1459390:intron	15.0%
!!	TCAATTTGAAAAATATCATT+TGG	+	tig0040221:4646-4665	Msa1459390:intergenic	15.0%
!!!	AAATGATATTTTTCAAATTG+AGG	-	tig0040221:4645-4664	Msa1459390:CDS	15.0%
!!!	TTTAGAAACTATTTTATCTT+CGG	+	tig0040221:5465-5484	Msa1459390:intergenic	15.0%
!!	TTAGAGGATAAAAAAAAAAA+AGG	+	tig0040221:6845-6864	Msa1459390:intergenic	15.0%
!!	TAATAATCTATAGTCTATTG+GGG	-	tig0040221:3533-3552	Msa1459390:CDS	20.0%
!!!	GTTTTGTTTATGATGAAATT+TGG	-	tig0040221:3952-3971	Msa1459390:intron	20.0%
!!	TTGAAAAATATCATTTGGAA+GGG	+	tig0040221:4641-4660	Msa1459390:intergenic	20.0%
!!	TTTGAAAAATATCATTTGGA+AGG	+	tig0040221:4642-4661	Msa1459390:intergenic	20.0%
!!!	TAAAGTAATTTTCATTGACA+GGG	+	tig0040221:5105-5124	Msa1459390:intergenic	20.0%
!!!	ATAAAGTAATTTTCATTGAC+AGG	+	tig0040221:5106-5125	Msa1459390:intergenic	20.0%
!!	AATGAAAATTACTTTATCAG+TGG	-	tig0040221:5109-5128	Msa1459390:intron	20.0%
!!!	ATCAGATTTCTAATGATTTT+AGG	-	tig0040221:5484-5503	Msa1459390:five_prime_UTR	20.0%
!!!	AAGCATTTTAATTTGTATTC+CGG	-	tig0040221:5614-5633	Msa1459390:five_prime_UTR	20.0%
!!	AACAATTGAAGTACAAAATA+AGG	+	tig0040221:5655-5674	Msa1459390:intergenic	20.0%
!!	TTCTTCGAAAAAAATGAAAT+CGG	-	tig0040221:6128-6147	Msa1459390:five_prime_UTR	20.0%
!!	AAAATTGAAAACAATCAACA+TGG	+	tig0040221:6574-6593	Msa1459390:intergenic	20.0%
!!!	CAATTTTTCATGAAAAGTTT+TGG	-	tig0040221:6587-6606	Msa1459390:intron	20.0%
!!	CTTATTATACTTAGAATCTA+AGG	+	tig0040221:6644-6663	Msa1459390:intergenic	20.0%
!!!	TAATAAGTTGCTTAGAATTT+TGG	-	tig0040221:6657-6676	Msa1459390:intron	20.0%
!!	GATTTGTATATTTACACTTT+AGG	-	tig0040221:6773-6792	Msa1459390:intron	20.0%
!!!	GATTAAATATGTGATTTGTA+TGG	-	tig0040221:6922-6941	Msa1459390:five_prime_UTR	20.0%
!!	TAATAATCTATAGTCTATTG+GGG	-	tig0040221:3533-3552	Msa1459390:CDS	20.0%
!!!	GTTTTGTTTATGATGAAATT+TGG	-	tig0040221:3952-3971	Msa1459390:intron	20.0%
!!	TTGAAAAATATCATTTGGAA+GGG	+	tig0040221:4641-4660	Msa1459390:intergenic	20.0%
!!	TTTGAAAAATATCATTTGGA+AGG	+	tig0040221:4642-4661	Msa1459390:intergenic	20.0%
!!!	TAAAGTAATTTTCATTGACA+GGG	+	tig0040221:5105-5124	Msa1459390:intergenic	20.0%
!!!	ATAAAGTAATTTTCATTGAC+AGG	+	tig0040221:5106-5125	Msa1459390:intergenic	20.0%
!!	AATGAAAATTACTTTATCAG+TGG	-	tig0040221:5109-5128	Msa1459390:intron	20.0%
!!!	ATCAGATTTCTAATGATTTT+AGG	-	tig0040221:5484-5503	Msa1459390:five_prime_UTR	20.0%
!!!	AAGCATTTTAATTTGTATTC+CGG	-	tig0040221:5614-5633	Msa1459390:five_prime_UTR	20.0%
!!	AACAATTGAAGTACAAAATA+AGG	+	tig0040221:5655-5674	Msa1459390:intergenic	20.0%
!!	TTCTTCGAAAAAAATGAAAT+CGG	-	tig0040221:6128-6147	Msa1459390:five_prime_UTR	20.0%
!!	AAAATTGAAAACAATCAACA+TGG	+	tig0040221:6574-6593	Msa1459390:intergenic	20.0%
!!!	CAATTTTTCATGAAAAGTTT+TGG	-	tig0040221:6587-6606	Msa1459390:intron	20.0%
!!	CTTATTATACTTAGAATCTA+AGG	+	tig0040221:6644-6663	Msa1459390:intergenic	20.0%
!!!	TAATAAGTTGCTTAGAATTT+TGG	-	tig0040221:6657-6676	Msa1459390:intron	20.0%
!!	GATTTGTATATTTACACTTT+AGG	-	tig0040221:6773-6792	Msa1459390:intron	20.0%
!!!	GATTAAATATGTGATTTGTA+TGG	-	tig0040221:6922-6941	Msa1459390:five_prime_UTR	20.0%
!!	ATGAAATAAGAGAGAGTATA+TGG	+	tig0040221:3218-3237	Msa1459390:intergenic	25.0%
!!	TAAAATTCCTCTCTAGAAAA+AGG	-	tig0040221:3281-3300	Msa1459390:three_prime_UTR	25.0%
!	ATTATTCTATTAGTGTTGTG+AGG	-	tig0040221:3571-3590	Msa1459390:CDS	25.0%
!	TGCAAATAAATCATTGTCAA+TGG	-	tig0040221:3602-3621	Msa1459390:CDS	25.0%
!!	ACTAGATTTTGTTGCATAAT+TGG	-	tig0040221:3687-3706	Msa1459390:CDS	25.0%
!!!	AGATATTTGGTCTTTTGATT+TGG	-	tig0040221:3716-3735	Msa1459390:CDS	25.0%
!	GATTTGGATTTACAATTTCA+AGG	-	tig0040221:3732-3751	Msa1459390:CDS	25.0%
!	TATAAAACAGATTGCAACAT+TGG	+	tig0040221:4758-4777	Msa1459390:intergenic	25.0%
!	TAACTAACTAAACATAGTTG+TGG	+	tig0040221:4969-4988	Msa1459390:intergenic	25.0%
!	AATGTTATGAACAAAGCATA+TGG	+	tig0040221:5003-5022	Msa1459390:intergenic	25.0%
!	CAAAAAATCGTGAAAATCAT+TGG	+	tig0040221:5265-5284	Msa1459390:intergenic	25.0%
!	TAATAGATTCATCAATCTCA+TGG	+	tig0040221:5324-5343	Msa1459390:intergenic	25.0%
!!	TATTACATTTTACATGTGCA+GGG	-	tig0040221:5339-5358	Msa1459390:CDS	25.0%
!!!	AAGGTTTTTTTCTTTCTTTC+CGG	+	tig0040221:5636-5655	Msa1459390:intergenic	25.0%
!	CTAAACAAGGTTTAAATTTG+TGG	+	tig0040221:5831-5850	Msa1459390:intergenic	25.0%
!!!	ATGTTTCTATTGATAGTGTT+TGG	-	tig0040221:5942-5961	Msa1459390:five_prime_UTR	25.0%
!	AAGGAATATATCAGAAACAT+GGG	-	tig0040221:6464-6483	Msa1459390:intron	25.0%
!	AAGTGTAAATATACAAATCC+TGG	+	tig0040221:6772-6791	Msa1459390:intergenic	25.0%
!	AAAAAAAAGGATTCTTTGCA+TGG	+	tig0040221:6832-6851	Msa1459390:intergenic	25.0%
!	ATCAACTAACAAAATGTTAG+AGG	+	tig0040221:6861-6880	Msa1459390:intergenic	25.0%
!!	TGTTAGTTGATTTATATACC+AGG	-	tig0040221:6870-6889	Msa1459390:five_prime_UTR	25.0%
!	AGAGTAAGTGGTTAATTAAT+TGG	+	tig0040221:6959-6978	Msa1459390:intergenic	25.0%
!!	ATGAAATAAGAGAGAGTATA+TGG	+	tig0040221:3218-3237	Msa1459390:intergenic	25.0%
!!	TAAAATTCCTCTCTAGAAAA+AGG	-	tig0040221:3281-3300	Msa1459390:three_prime_UTR	25.0%
!	ATTATTCTATTAGTGTTGTG+AGG	-	tig0040221:3571-3590	Msa1459390:CDS	25.0%
!	TGCAAATAAATCATTGTCAA+TGG	-	tig0040221:3602-3621	Msa1459390:CDS	25.0%
!!	ACTAGATTTTGTTGCATAAT+TGG	-	tig0040221:3687-3706	Msa1459390:CDS	25.0%
!!!	AGATATTTGGTCTTTTGATT+TGG	-	tig0040221:3716-3735	Msa1459390:CDS	25.0%
!	GATTTGGATTTACAATTTCA+AGG	-	tig0040221:3732-3751	Msa1459390:CDS	25.0%
!	TATAAAACAGATTGCAACAT+TGG	+	tig0040221:4758-4777	Msa1459390:intergenic	25.0%
!	TAACTAACTAAACATAGTTG+TGG	+	tig0040221:4969-4988	Msa1459390:intergenic	25.0%
!	AATGTTATGAACAAAGCATA+TGG	+	tig0040221:5003-5022	Msa1459390:intergenic	25.0%
!	CAAAAAATCGTGAAAATCAT+TGG	+	tig0040221:5265-5284	Msa1459390:intergenic	25.0%
!	TAATAGATTCATCAATCTCA+TGG	+	tig0040221:5324-5343	Msa1459390:intergenic	25.0%
!!	TATTACATTTTACATGTGCA+GGG	-	tig0040221:5339-5358	Msa1459390:CDS	25.0%
!!!	AAGGTTTTTTTCTTTCTTTC+CGG	+	tig0040221:5636-5655	Msa1459390:intergenic	25.0%
!	CTAAACAAGGTTTAAATTTG+TGG	+	tig0040221:5831-5850	Msa1459390:intergenic	25.0%
!!!	ATGTTTCTATTGATAGTGTT+TGG	-	tig0040221:5942-5961	Msa1459390:five_prime_UTR	25.0%
!	AAGGAATATATCAGAAACAT+GGG	-	tig0040221:6464-6483	Msa1459390:intron	25.0%
!	AAGTGTAAATATACAAATCC+TGG	+	tig0040221:6772-6791	Msa1459390:intergenic	25.0%
!	AAAAAAAAGGATTCTTTGCA+TGG	+	tig0040221:6832-6851	Msa1459390:intergenic	25.0%
!	ATCAACTAACAAAATGTTAG+AGG	+	tig0040221:6861-6880	Msa1459390:intergenic	25.0%
!!	TGTTAGTTGATTTATATACC+AGG	-	tig0040221:6870-6889	Msa1459390:five_prime_UTR	25.0%
!	AGAGTAAGTGGTTAATTAAT+TGG	+	tig0040221:6959-6978	Msa1459390:intergenic	25.0%
	ACTCTACTACACTATTAGTT+AGG	+	tig0040221:3050-3069	None:intergenic	30.0%
	TAATAGTGTAGTAGAGTAAC+TGG	-	tig0040221:3053-3072	Msa1459390:three_prime_UTR	30.0%
!	CTGTTTTGTAGGAATAGAAA+AGG	+	tig0040221:3112-3131	Msa1459390:intergenic	30.0%
!	AAAAGGAAACCGTTTCTTTT+TGG	-	tig0040221:3298-3317	Msa1459390:exon	30.0%
!	CATGCTTTTGAATTCAAAAG+TGG	+	tig0040221:3463-3482	Msa1459390:intergenic	30.0%
!	CACTTTTGAATTCAAAAGCA+TGG	-	tig0040221:3461-3480	Msa1459390:CDS	30.0%
	CCATATACTTAACATGAGAA+AGG	+	tig0040221:3641-3660	Msa1459390:intergenic	30.0%
	CCTTTCTCATGTTAAGTATA+TGG	-	tig0040221:3638-3657	Msa1459390:CDS	30.0%
	TAATTGGTGAGAGAGATATT+TGG	-	tig0040221:3703-3722	Msa1459390:CDS	30.0%
	TGATCTATTCTATGACTCAT+TGG	-	tig0040221:3866-3885	Msa1459390:intron	30.0%
	TATTAGTGTGAAGGAAAGAA+GGG	-	tig0040221:3986-4005	Msa1459390:intron	30.0%
	TCTTGTTGGAAGATCTTAAA+AGG	-	tig0040221:4222-4241	Msa1459390:intron	30.0%
!	TGAGGCAAAAGAAGAATTTT+GGG	-	tig0040221:4298-4317	Msa1459390:CDS	30.0%
!!!	GAATTTTGGGATTTCGATAA+TGG	-	tig0040221:4311-4330	Msa1459390:CDS	30.0%
!	TCGATAATGGTAAAGCTAAT+AGG	-	tig0040221:4324-4343	Msa1459390:CDS	30.0%
	GTAAAGCTAATAGGAAAAAC+TGG	-	tig0040221:4333-4352	Msa1459390:CDS	30.0%
	AGGTAAAGCAGAATAAAAAG+AGG	-	tig0040221:4443-4462	Msa1459390:intron	30.0%
	TAAAGCAGAATAAAAAGAGG+TGG	-	tig0040221:4446-4465	Msa1459390:intron	30.0%
	AACATAGTTGTGGAAAATAC+AGG	+	tig0040221:4959-4978	Msa1459390:intergenic	30.0%
	CTGTATCCAATTATAGAAGA+GGG	+	tig0040221:5063-5082	Msa1459390:intergenic	30.0%
	ACTGTATCCAATTATAGAAG+AGG	+	tig0040221:5064-5083	Msa1459390:intergenic	30.0%
	TATTCGAACTTTACCATCAA+TGG	+	tig0040221:5137-5156	Msa1459390:intergenic	30.0%
!	TTGATGGTAAAGTTCGAATA+TGG	-	tig0040221:5137-5156	Msa1459390:CDS	30.0%
	TGATGGTAAAGTTCGAATAT+GGG	-	tig0040221:5138-5157	Msa1459390:CDS	30.0%
	GCTATAAGTTATCAACAAGA+TGG	-	tig0040221:5214-5233	Msa1459390:CDS	30.0%
	ACTTTGACAAAGAAATCTTG+CGG	-	tig0040221:5298-5317	Msa1459390:CDS	30.0%
!	CTATTACATTTTACATGTGC+AGG	-	tig0040221:5338-5357	Msa1459390:CDS	30.0%
	TACCTGAAGCAACATAAAAA+CGG	+	tig0040221:5395-5414	Msa1459390:intergenic	30.0%
!	TAATTCTCTGACAGTTGTTT+TGG	+	tig0040221:5711-5730	Msa1459390:intergenic	30.0%
	AGATTCCAAAATCTGCATAT+TGG	-	tig0040221:5744-5763	Msa1459390:five_prime_UTR	30.0%
	GAGATTGTTCAGAAATACAA+AGG	-	tig0040221:5775-5794	Msa1459390:five_prime_UTR	30.0%
!	TACAAAGGTACAACACTTAA+TGG	-	tig0040221:5790-5809	Msa1459390:five_prime_UTR	30.0%
!!	CCTAAACAAAGTTCTAAACA+AGG	+	tig0040221:5844-5863	Msa1459390:intergenic	30.0%
!	CCTTGTTTAGAACTTTGTTT+AGG	-	tig0040221:5841-5860	Msa1459390:five_prime_UTR	30.0%
	AACTTCAATGACTTCAAAAG+TGG	-	tig0040221:6105-6124	Msa1459390:five_prime_UTR	30.0%
!	TAACTTTTCTCACTATTCTC+TGG	-	tig0040221:6239-6258	Msa1459390:intron	30.0%
!!	AACGATTTTCTCTTGGTAAT+TGG	-	tig0040221:6307-6326	Msa1459390:intron	30.0%
	GAAGGAATATATCAGAAACA+TGG	-	tig0040221:6463-6482	Msa1459390:intron	30.0%
	AGGAATATATCAGAAACATG+GGG	-	tig0040221:6465-6484	Msa1459390:intron	30.0%
!	ATCAAGACATTCCACAATTT+TGG	-	tig0040221:6522-6541	Msa1459390:intron	30.0%
!!!	TTTCATGAAAAGTTTTGGCT+CGG	-	tig0040221:6592-6611	Msa1459390:intron	30.0%
!!	TAAAGGTGTAAATTTTCACG+TGG	-	tig0040221:6615-6634	Msa1459390:intron	30.0%
!	AAGTTGCTTAGAATTTTGGA+AGG	-	tig0040221:6661-6680	Msa1459390:intron	30.0%
	AATCATTGTCAAATCCATGA+TGG	-	tig0040221:6725-6744	Msa1459390:intron	30.0%
	ACTCTACTACACTATTAGTT+AGG	+	tig0040221:3050-3069	Msa0071240:intergenic	30.0%
	TAATAGTGTAGTAGAGTAAC+TGG	-	tig0040221:3053-3072	Msa1459390:three_prime_UTR	30.0%
!	CTGTTTTGTAGGAATAGAAA+AGG	+	tig0040221:3112-3131	Msa1459390:intergenic	30.0%
!	AAAAGGAAACCGTTTCTTTT+TGG	-	tig0040221:3298-3317	Msa1459390:exon	30.0%
!	CATGCTTTTGAATTCAAAAG+TGG	+	tig0040221:3463-3482	Msa1459390:intergenic	30.0%
!	CACTTTTGAATTCAAAAGCA+TGG	-	tig0040221:3461-3480	Msa1459390:CDS	30.0%
	CCATATACTTAACATGAGAA+AGG	+	tig0040221:3641-3660	Msa1459390:intergenic	30.0%
	CCTTTCTCATGTTAAGTATA+TGG	-	tig0040221:3638-3657	Msa1459390:CDS	30.0%
	TAATTGGTGAGAGAGATATT+TGG	-	tig0040221:3703-3722	Msa1459390:CDS	30.0%
	TGATCTATTCTATGACTCAT+TGG	-	tig0040221:3866-3885	Msa1459390:intron	30.0%
	TATTAGTGTGAAGGAAAGAA+GGG	-	tig0040221:3986-4005	Msa1459390:intron	30.0%
	TCTTGTTGGAAGATCTTAAA+AGG	-	tig0040221:4222-4241	Msa1459390:intron	30.0%
!	TGAGGCAAAAGAAGAATTTT+GGG	-	tig0040221:4298-4317	Msa1459390:CDS	30.0%
!!!	GAATTTTGGGATTTCGATAA+TGG	-	tig0040221:4311-4330	Msa1459390:CDS	30.0%
!	TCGATAATGGTAAAGCTAAT+AGG	-	tig0040221:4324-4343	Msa1459390:CDS	30.0%
	GTAAAGCTAATAGGAAAAAC+TGG	-	tig0040221:4333-4352	Msa1459390:CDS	30.0%
	AGGTAAAGCAGAATAAAAAG+AGG	-	tig0040221:4443-4462	Msa1459390:intron	30.0%
	TAAAGCAGAATAAAAAGAGG+TGG	-	tig0040221:4446-4465	Msa1459390:intron	30.0%
	AACATAGTTGTGGAAAATAC+AGG	+	tig0040221:4959-4978	Msa1459390:intergenic	30.0%
	CTGTATCCAATTATAGAAGA+GGG	+	tig0040221:5063-5082	Msa1459390:intergenic	30.0%
	ACTGTATCCAATTATAGAAG+AGG	+	tig0040221:5064-5083	Msa1459390:intergenic	30.0%
	TATTCGAACTTTACCATCAA+TGG	+	tig0040221:5137-5156	Msa1459390:intergenic	30.0%
!	TTGATGGTAAAGTTCGAATA+TGG	-	tig0040221:5137-5156	Msa1459390:CDS	30.0%
	TGATGGTAAAGTTCGAATAT+GGG	-	tig0040221:5138-5157	Msa1459390:CDS	30.0%
	GCTATAAGTTATCAACAAGA+TGG	-	tig0040221:5214-5233	Msa1459390:CDS	30.0%
	ACTTTGACAAAGAAATCTTG+CGG	-	tig0040221:5298-5317	Msa1459390:CDS	30.0%
!	CTATTACATTTTACATGTGC+AGG	-	tig0040221:5338-5357	Msa1459390:CDS	30.0%
	TACCTGAAGCAACATAAAAA+CGG	+	tig0040221:5395-5414	Msa1459390:intergenic	30.0%
!	TAATTCTCTGACAGTTGTTT+TGG	+	tig0040221:5711-5730	Msa1459390:intergenic	30.0%
	AGATTCCAAAATCTGCATAT+TGG	-	tig0040221:5744-5763	Msa1459390:five_prime_UTR	30.0%
	GAGATTGTTCAGAAATACAA+AGG	-	tig0040221:5775-5794	Msa1459390:five_prime_UTR	30.0%
!	TACAAAGGTACAACACTTAA+TGG	-	tig0040221:5790-5809	Msa1459390:five_prime_UTR	30.0%
!!	CCTAAACAAAGTTCTAAACA+AGG	+	tig0040221:5844-5863	Msa1459390:intergenic	30.0%
!	CCTTGTTTAGAACTTTGTTT+AGG	-	tig0040221:5841-5860	Msa1459390:five_prime_UTR	30.0%
	AACTTCAATGACTTCAAAAG+TGG	-	tig0040221:6105-6124	Msa1459390:five_prime_UTR	30.0%
!	TAACTTTTCTCACTATTCTC+TGG	-	tig0040221:6239-6258	Msa1459390:intron	30.0%
!!	AACGATTTTCTCTTGGTAAT+TGG	-	tig0040221:6307-6326	Msa1459390:intron	30.0%
	GAAGGAATATATCAGAAACA+TGG	-	tig0040221:6463-6482	Msa1459390:intron	30.0%
	AGGAATATATCAGAAACATG+GGG	-	tig0040221:6465-6484	Msa1459390:intron	30.0%
!	ATCAAGACATTCCACAATTT+TGG	-	tig0040221:6522-6541	Msa1459390:intron	30.0%
!!!	TTTCATGAAAAGTTTTGGCT+CGG	-	tig0040221:6592-6611	Msa1459390:intron	30.0%
!!	TAAAGGTGTAAATTTTCACG+TGG	-	tig0040221:6615-6634	Msa1459390:intron	30.0%
!	AAGTTGCTTAGAATTTTGGA+AGG	-	tig0040221:6661-6680	Msa1459390:intron	30.0%
	AATCATTGTCAAATCCATGA+TGG	-	tig0040221:6725-6744	Msa1459390:intron	30.0%
	TCTTTACTCTATGGTCTGTT+AGG	+	tig0040221:2910-2929	None:intergenic	35.0%
	AGCGATAACTCTTTACTCTA+TGG	+	tig0040221:2919-2938	None:intergenic	35.0%
	GCATATTCATTCATGGCTTA+AGG	+	tig0040221:2950-2969	None:intergenic	35.0%
	GAGCTATGCATATTCATTCA+TGG	+	tig0040221:2957-2976	None:intergenic	35.0%
!!!	GTTTTGATGAGAAGCATTGA+TGG	+	tig0040221:3014-3033	None:intergenic	35.0%
	TTGTAGGAATAGAAAAGGCA+AGG	+	tig0040221:3107-3126	Msa1459390:intergenic	35.0%
!	GCTTGGTAACCAAAAAGAAA+CGG	+	tig0040221:3310-3329	Msa1459390:intergenic	35.0%
	AATCTATAGTCTATTGGGGT+TGG	-	tig0040221:3537-3556	Msa1459390:CDS	35.0%
!!	TGAAAAGTAGTGGATTGAAG+TGG	-	tig0040221:3758-3777	Msa1459390:CDS	35.0%
!	GACTCATTGGATATTTTGTC+TGG	-	tig0040221:3879-3898	Msa1459390:intron	35.0%
!!!	ATTCTGTTTTAGCCGAAGAA+GGG	-	tig0040221:3907-3926	Msa1459390:intron	35.0%
	CTTCTTTCCTTCACACTAAT+AGG	+	tig0040221:3987-4006	Msa1459390:intergenic	35.0%
	CTATTAGTGTGAAGGAAAGA+AGG	-	tig0040221:3985-4004	Msa1459390:intron	35.0%
!	ATTTAGCTTACACTTCTTCC+AGG	-	tig0040221:4030-4049	Msa1459390:intron	35.0%
!	TTTAGCTTACACTTCTTCCA+GGG	-	tig0040221:4031-4050	Msa1459390:intron	35.0%
!!	AAACAACGAGTTTTGATGAC+TGG	-	tig0040221:4069-4088	Msa1459390:intron	35.0%
	TGTTGGAAGATCTTAAAAGG+CGG	-	tig0040221:4225-4244	Msa1459390:intron	35.0%
!	GTGAGGCAAAAGAAGAATTT+TGG	-	tig0040221:4297-4316	Msa1459390:CDS	35.0%
	GAATAAAACTCGTAGAGTGA+AGG	-	tig0040221:4423-4442	Msa1459390:intron	35.0%
	CAAGAAATTAGAGCTCACAA+AGG	-	tig0040221:4496-4515	Msa1459390:intron	35.0%
	ACTATGAAATTCAGTCCCAA+TGG	-	tig0040221:4529-4548	Msa1459390:intron	35.0%
	TCATTTGGAAGGGAAACAAA+GGG	+	tig0040221:4631-4650	Msa1459390:intergenic	35.0%
	ATCATTTGGAAGGGAAACAA+AGG	+	tig0040221:4632-4651	Msa1459390:intergenic	35.0%
	TGACCAAACAATTCTTGAAG+TGG	+	tig0040221:4676-4695	Msa1459390:intergenic	35.0%
	TTCCAGTGATATCTTGGATT+TGG	-	tig0040221:4696-4715	Msa1459390:CDS	35.0%
	ATGTTCAATGTCTAAGAGCA+TGG	+	tig0040221:5027-5046	Msa1459390:intergenic	35.0%
	ATTGTGCCCTCTTCTATAAT+TGG	-	tig0040221:5054-5073	Msa1459390:intron	35.0%
	TTTATCAGTGGATCCATTGA+TGG	-	tig0040221:5121-5140	Msa1459390:intron	35.0%
	GATGGTAAAGTTCGAATATG+GGG	-	tig0040221:5139-5158	Msa1459390:CDS	35.0%
!	TGAAGAACGAGTTATTGACT+GGG	-	tig0040221:5168-5187	Msa1459390:CDS	35.0%
!	TTATTGACTGGGCAGATATA+CGG	-	tig0040221:5179-5198	Msa1459390:CDS	35.0%
!	TTTGTAGTTGGTTCTCTTAC+AGG	-	tig0040221:5363-5382	Msa1459390:CDS	35.0%
	AGGAAAATATTTCCAGCTTG+AGG	-	tig0040221:5504-5523	Msa1459390:five_prime_UTR	35.0%
	CTAATGCTTTCTTCTTTCCA+TGG	+	tig0040221:5543-5562	Msa1459390:intergenic	35.0%
!!	CATGGAAAGAAGAAAGCATT+AGG	-	tig0040221:5541-5560	Msa1459390:five_prime_UTR	35.0%
!	TCGATCCAATATGCAGATTT+TGG	+	tig0040221:5752-5771	Msa1459390:intergenic	35.0%
	ACTTAATGGTTGTCACAATC+TGG	-	tig0040221:5804-5823	Msa1459390:five_prime_UTR	35.0%
	GGGAAACATATCATTTCAGT+TGG	-	tig0040221:6057-6076	Msa1459390:five_prime_UTR	35.0%
	ACATATCATTTCAGTTGGAG+AGG	-	tig0040221:6062-6081	Msa1459390:five_prime_UTR	35.0%
!	TTGTGAGTACTTTTCCTTCA+AGG	-	tig0040221:6158-6177	Msa1459390:five_prime_UTR	35.0%
!	TGTGAGTACTTTTCCTTCAA+GGG	-	tig0040221:6159-6178	Msa1459390:intron	35.0%
!	GATACAGAACGATTTTCTCT+TGG	-	tig0040221:6300-6319	Msa1459390:intron	35.0%
!	GGTAATTGGTTCTTCATTGA+TGG	-	tig0040221:6321-6340	Msa1459390:intron	35.0%
	TCACATTCATCTTCTACAAG+AGG	+	tig0040221:6408-6427	Msa1459390:intergenic	35.0%
!!	TTGCTTAGAATTTTGGAAGG+TGG	-	tig0040221:6664-6683	Msa1459390:intron	35.0%
	TCAAGTTCTTGACAAATTCC+AGG	-	tig0040221:6751-6770	Msa1459390:intron	35.0%
!	TGCACTTTTCATTATGTACC+TGG	+	tig0040221:6891-6910	Msa1459390:intergenic	35.0%
	TCTTTACTCTATGGTCTGTT+AGG	+	tig0040221:2910-2929	Msa0071240:intergenic	35.0%
	AGCGATAACTCTTTACTCTA+TGG	+	tig0040221:2919-2938	Msa0071240:intergenic	35.0%
	GCATATTCATTCATGGCTTA+AGG	+	tig0040221:2950-2969	Msa0071240:intergenic	35.0%
	GAGCTATGCATATTCATTCA+TGG	+	tig0040221:2957-2976	Msa0071240:intergenic	35.0%
!!!	GTTTTGATGAGAAGCATTGA+TGG	+	tig0040221:3014-3033	Msa0071240:intergenic	35.0%
	TTGTAGGAATAGAAAAGGCA+AGG	+	tig0040221:3107-3126	Msa1459390:intergenic	35.0%
!	GCTTGGTAACCAAAAAGAAA+CGG	+	tig0040221:3310-3329	Msa1459390:intergenic	35.0%
	AATCTATAGTCTATTGGGGT+TGG	-	tig0040221:3537-3556	Msa1459390:CDS	35.0%
!!	TGAAAAGTAGTGGATTGAAG+TGG	-	tig0040221:3758-3777	Msa1459390:CDS	35.0%
!	GACTCATTGGATATTTTGTC+TGG	-	tig0040221:3879-3898	Msa1459390:intron	35.0%
!!!	ATTCTGTTTTAGCCGAAGAA+GGG	-	tig0040221:3907-3926	Msa1459390:intron	35.0%
	CTTCTTTCCTTCACACTAAT+AGG	+	tig0040221:3987-4006	Msa1459390:intergenic	35.0%
	CTATTAGTGTGAAGGAAAGA+AGG	-	tig0040221:3985-4004	Msa1459390:intron	35.0%
!	ATTTAGCTTACACTTCTTCC+AGG	-	tig0040221:4030-4049	Msa1459390:intron	35.0%
!	TTTAGCTTACACTTCTTCCA+GGG	-	tig0040221:4031-4050	Msa1459390:intron	35.0%
!!	AAACAACGAGTTTTGATGAC+TGG	-	tig0040221:4069-4088	Msa1459390:intron	35.0%
	TGTTGGAAGATCTTAAAAGG+CGG	-	tig0040221:4225-4244	Msa1459390:intron	35.0%
!	GTGAGGCAAAAGAAGAATTT+TGG	-	tig0040221:4297-4316	Msa1459390:CDS	35.0%
	GAATAAAACTCGTAGAGTGA+AGG	-	tig0040221:4423-4442	Msa1459390:intron	35.0%
	CAAGAAATTAGAGCTCACAA+AGG	-	tig0040221:4496-4515	Msa1459390:intron	35.0%
	ACTATGAAATTCAGTCCCAA+TGG	-	tig0040221:4529-4548	Msa1459390:intron	35.0%
	TCATTTGGAAGGGAAACAAA+GGG	+	tig0040221:4631-4650	Msa1459390:intergenic	35.0%
	ATCATTTGGAAGGGAAACAA+AGG	+	tig0040221:4632-4651	Msa1459390:intergenic	35.0%
	TGACCAAACAATTCTTGAAG+TGG	+	tig0040221:4676-4695	Msa1459390:intergenic	35.0%
	TTCCAGTGATATCTTGGATT+TGG	-	tig0040221:4696-4715	Msa1459390:CDS	35.0%
	ATGTTCAATGTCTAAGAGCA+TGG	+	tig0040221:5027-5046	Msa1459390:intergenic	35.0%
	ATTGTGCCCTCTTCTATAAT+TGG	-	tig0040221:5054-5073	Msa1459390:intron	35.0%
	TTTATCAGTGGATCCATTGA+TGG	-	tig0040221:5121-5140	Msa1459390:intron	35.0%
	GATGGTAAAGTTCGAATATG+GGG	-	tig0040221:5139-5158	Msa1459390:CDS	35.0%
!	TGAAGAACGAGTTATTGACT+GGG	-	tig0040221:5168-5187	Msa1459390:CDS	35.0%
!	TTATTGACTGGGCAGATATA+CGG	-	tig0040221:5179-5198	Msa1459390:CDS	35.0%
!	TTTGTAGTTGGTTCTCTTAC+AGG	-	tig0040221:5363-5382	Msa1459390:CDS	35.0%
	AGGAAAATATTTCCAGCTTG+AGG	-	tig0040221:5504-5523	Msa1459390:five_prime_UTR	35.0%
	CTAATGCTTTCTTCTTTCCA+TGG	+	tig0040221:5543-5562	Msa1459390:intergenic	35.0%
!!	CATGGAAAGAAGAAAGCATT+AGG	-	tig0040221:5541-5560	Msa1459390:five_prime_UTR	35.0%
!	TCGATCCAATATGCAGATTT+TGG	+	tig0040221:5752-5771	Msa1459390:intergenic	35.0%
	ACTTAATGGTTGTCACAATC+TGG	-	tig0040221:5804-5823	Msa1459390:five_prime_UTR	35.0%
	GGGAAACATATCATTTCAGT+TGG	-	tig0040221:6057-6076	Msa1459390:five_prime_UTR	35.0%
	ACATATCATTTCAGTTGGAG+AGG	-	tig0040221:6062-6081	Msa1459390:five_prime_UTR	35.0%
!	TTGTGAGTACTTTTCCTTCA+AGG	-	tig0040221:6158-6177	Msa1459390:five_prime_UTR	35.0%
!	TGTGAGTACTTTTCCTTCAA+GGG	-	tig0040221:6159-6178	Msa1459390:intron	35.0%
!	GATACAGAACGATTTTCTCT+TGG	-	tig0040221:6300-6319	Msa1459390:intron	35.0%
!	GGTAATTGGTTCTTCATTGA+TGG	-	tig0040221:6321-6340	Msa1459390:intron	35.0%
	TCACATTCATCTTCTACAAG+AGG	+	tig0040221:6408-6427	Msa1459390:intergenic	35.0%
!!	TTGCTTAGAATTTTGGAAGG+TGG	-	tig0040221:6664-6683	Msa1459390:intron	35.0%
	TCAAGTTCTTGACAAATTCC+AGG	-	tig0040221:6751-6770	Msa1459390:intron	35.0%
!	TGCACTTTTCATTATGTACC+TGG	+	tig0040221:6891-6910	Msa1459390:intergenic	35.0%
	TTACTCTATGGTCTGTTAGG+TGG	+	tig0040221:2907-2926	None:intergenic	40.0%
!!	TGAGAAGCATTGATGGCTAA+TGG	+	tig0040221:3007-3026	None:intergenic	40.0%
!!!	GCTAGTTAGTGCTGTTTTGT+AGG	+	tig0040221:3123-3142	Msa1459390:intergenic	40.0%
!!	ACGGTTTCCTTTTTCTAGAG+AGG	+	tig0040221:3291-3310	Msa1459390:intergenic	40.0%
	TGTTTACCTCTGCATATGCT+TGG	+	tig0040221:3327-3346	Msa1459390:intergenic	40.0%
	TTGACAGTGACATGTATTCC+TGG	-	tig0040221:3421-3440	Msa1459390:CDS	40.0%
	GGAGACTATACTACTATTCC+AGG	+	tig0040221:3442-3461	Msa1459390:intergenic	40.0%
!!	TTCAAGGCGTTGAAAAGTAG+TGG	-	tig0040221:3748-3767	Msa1459390:CDS	40.0%
!!	AGTGGATTGAAGTGGTAAAG+TGG	-	tig0040221:3766-3785	Msa1459390:CDS	40.0%
!	GTGGATTGAAGTGGTAAAGT+GGG	-	tig0040221:3767-3786	Msa1459390:CDS	40.0%
!	GGTAAAGTGGGATTTTCATG+TGG	-	tig0040221:3779-3798	Msa1459390:CDS	40.0%
!	AAGTGGGATTTTCATGTGGA+AGG	-	tig0040221:3783-3802	Msa1459390:CDS	40.0%
!	AGCTGTGATGATGATGATGA+TGG	-	tig0040221:3837-3856	Msa1459390:CDS	40.0%
!!!	GATTCTGTTTTAGCCGAAGA+AGG	-	tig0040221:3906-3925	Msa1459390:intron	40.0%
	TTCAGAACCAAACCCTTCTT+CGG	+	tig0040221:3922-3941	Msa1459390:intergenic	40.0%
!!	AAGAAGGGTTTGGTTCTGAA+AGG	-	tig0040221:3922-3941	Msa1459390:intron	40.0%
	GAATGAGCCTATTAGTGTGA+AGG	-	tig0040221:3977-3996	Msa1459390:intron	40.0%
	TTTCTCTTGTGAACAAACCC+TGG	+	tig0040221:4051-4070	Msa1459390:intergenic	40.0%
!!	AACGAGTTTTGATGACTGGT+CGG	-	tig0040221:4073-4092	Msa1459390:CDS	40.0%
	AATGCAAGCATTTCACCTTC+TGG	-	tig0040221:4143-4162	Msa1459390:CDS	40.0%
!	TCACCTTCTGGTAAAGTATC+TGG	-	tig0040221:4155-4174	Msa1459390:intron	40.0%
!	CACCTTCTGGTAAAGTATCT+GGG	-	tig0040221:4156-4175	Msa1459390:intron	40.0%
	TTCCCAGATACTTTACCAGA+AGG	+	tig0040221:4161-4180	Msa1459390:intergenic	40.0%
!	TGGTAAAGTATCTGGGAAGT+TGG	-	tig0040221:4163-4182	Msa1459390:intron	40.0%
!!	TTCTGAAGCTGAAGTCTTGT+TGG	-	tig0040221:4208-4227	Msa1459390:intron	40.0%
!!	TGAAGCGTTTTGTGAACATC+AGG	-	tig0040221:4357-4376	Msa1459390:intron	40.0%
!	CGTTTTGTGAACATCAGGAA+AGG	-	tig0040221:4362-4381	Msa1459390:intron	40.0%
	GCAGAATAAAAAGAGGTGGA+TGG	-	tig0040221:4450-4469	Msa1459390:intron	40.0%
	GAGTTCAGTGAGGTATACAT+TGG	-	tig0040221:4472-4491	Msa1459390:CDS	40.0%
	GAGCTCACAAAGGACTAATA+TGG	-	tig0040221:4506-4525	Msa1459390:intron	40.0%
	CTAGCCAAATACTGACCATT+GGG	+	tig0040221:4547-4566	Msa1459390:intergenic	40.0%
	ACTAGCCAAATACTGACCAT+TGG	+	tig0040221:4548-4567	Msa1459390:intergenic	40.0%
	AATGGTCAGTATTTGGCTAG+TGG	-	tig0040221:4547-4566	Msa1459390:intron	40.0%
	TCGCCACTTCAAGAATTGTT+TGG	-	tig0040221:4670-4689	Msa1459390:CDS	40.0%
	TGGTCATTCCAGTGATATCT+TGG	-	tig0040221:4690-4709	Msa1459390:CDS	40.0%
	ACTCACATCTGAATTAGACC+AGG	+	tig0040221:4722-4741	Msa1459390:intergenic	40.0%
	GATTCTTCTTTCGTCTTCGA+TGG	-	tig0040221:4835-4854	Msa1459390:intron	40.0%
!	CTAAGTGTTTTCCCTCACAA+AGG	-	tig0040221:4899-4918	Msa1459390:intron	40.0%
	ACTTACCAAAGCCTTTGTGA+GGG	+	tig0040221:4913-4932	Msa1459390:intergenic	40.0%
	TACTTACCAAAGCCTTTGTG+AGG	+	tig0040221:4914-4933	Msa1459390:intergenic	40.0%
	GTGAAGAACGAGTTATTGAC+TGG	-	tig0040221:5167-5186	Msa1459390:CDS	40.0%
!	TATTGACTGGGCAGATATAC+GGG	-	tig0040221:5180-5199	Msa1459390:CDS	40.0%
!!!	TGCCGTTTTTATGTTGCTTC+AGG	-	tig0040221:5390-5409	Msa1459390:exon	40.0%
	TTGCTTCAGGTATGTACATG+TGG	-	tig0040221:5403-5422	Msa1459390:five_prime_UTR	40.0%
	CTCATGAATGTAGCAGCAAT+TGG	+	tig0040221:5433-5452	Msa1459390:intergenic	40.0%
	GCATTAGGCAACAAGATTAC+TGG	-	tig0040221:5556-5575	Msa1459390:five_prime_UTR	40.0%
	CAACAAGATTACTGGCATTC+AGG	-	tig0040221:5564-5583	Msa1459390:five_prime_UTR	40.0%
	TGGAAGAACTGCAAACAACA+TGG	+	tig0040221:5691-5710	Msa1459390:intergenic	40.0%
!	GTCAGTTTTCTCGTTCTATC+AGG	-	tig0040221:5988-6007	Msa1459390:five_prime_UTR	40.0%
	TCCGGTTCATTTACATCAAG+TGG	-	tig0040221:6036-6055	Msa1459390:five_prime_UTR	40.0%
	CCCACTTGATGTAAATGAAC+CGG	+	tig0040221:6040-6059	Msa1459390:intergenic	40.0%
	CCGGTTCATTTACATCAAGT+GGG	-	tig0040221:6037-6056	Msa1459390:five_prime_UTR	40.0%
!	TTCATTGATGGTACATGTCG+AGG	-	tig0040221:6333-6352	Msa1459390:intron	40.0%
	GAGGTTCTACTTCTATGACA+TGG	-	tig0040221:6352-6371	Msa1459390:intron	40.0%
	TGAGGAGAAACTTCCAACAT+GGG	-	tig0040221:6377-6396	Msa1459390:intron	40.0%
	ACAAGAGGTAAATCCCATGT+TGG	+	tig0040221:6393-6412	Msa1459390:intergenic	40.0%
	TGTCACGAAGATAGTAGCTA+TGG	-	tig0040221:6441-6460	Msa1459390:intron	40.0%
	ACGAAGATAGTAGCTATGGA+AGG	-	tig0040221:6445-6464	Msa1459390:intron	40.0%
	TAACAGGCAAGCCAAAATTG+TGG	+	tig0040221:6536-6555	Msa1459390:intergenic	40.0%
!!!	ACAATTTTGGCTTGCCTGTT+AGG	-	tig0040221:6535-6554	Msa1459390:five_prime_UTR	40.0%
!!!	GAAAAGTTTTGGCTCGGTAA+AGG	-	tig0040221:6598-6617	Msa1459390:intron	40.0%
!	AGGTGTAAATTTTCACGTGG+TGG	-	tig0040221:6618-6637	Msa1459390:intron	40.0%
	TGGTTATATCATCTGCGTAC+AGG	-	tig0040221:6699-6718	Msa1459390:intron	40.0%
	CAAGAACTTGACATCCATCA+TGG	+	tig0040221:6742-6761	Msa1459390:intergenic	40.0%
	GCCTTCAATGTCGTGAATTT+AGG	-	tig0040221:6799-6818	Msa1459390:five_prime_UTR	40.0%
	GCCTAAATTCACGACATTGA+AGG	+	tig0040221:6803-6822	Msa1459390:intergenic	40.0%
	TTACTCTATGGTCTGTTAGG+TGG	+	tig0040221:2907-2926	Msa0071240:intergenic	40.0%
!!	TGAGAAGCATTGATGGCTAA+TGG	+	tig0040221:3007-3026	Msa0071240:intergenic	40.0%
!!!	GCTAGTTAGTGCTGTTTTGT+AGG	+	tig0040221:3123-3142	Msa1459390:intergenic	40.0%
!!	ACGGTTTCCTTTTTCTAGAG+AGG	+	tig0040221:3291-3310	Msa1459390:intergenic	40.0%
	TGTTTACCTCTGCATATGCT+TGG	+	tig0040221:3327-3346	Msa1459390:intergenic	40.0%
	TTGACAGTGACATGTATTCC+TGG	-	tig0040221:3421-3440	Msa1459390:CDS	40.0%
	GGAGACTATACTACTATTCC+AGG	+	tig0040221:3442-3461	Msa1459390:intergenic	40.0%
!!	TTCAAGGCGTTGAAAAGTAG+TGG	-	tig0040221:3748-3767	Msa1459390:CDS	40.0%
!!	AGTGGATTGAAGTGGTAAAG+TGG	-	tig0040221:3766-3785	Msa1459390:CDS	40.0%
!	GTGGATTGAAGTGGTAAAGT+GGG	-	tig0040221:3767-3786	Msa1459390:CDS	40.0%
!	GGTAAAGTGGGATTTTCATG+TGG	-	tig0040221:3779-3798	Msa1459390:CDS	40.0%
!	AAGTGGGATTTTCATGTGGA+AGG	-	tig0040221:3783-3802	Msa1459390:CDS	40.0%
!	AGCTGTGATGATGATGATGA+TGG	-	tig0040221:3837-3856	Msa1459390:CDS	40.0%
!!!	GATTCTGTTTTAGCCGAAGA+AGG	-	tig0040221:3906-3925	Msa1459390:intron	40.0%
	TTCAGAACCAAACCCTTCTT+CGG	+	tig0040221:3922-3941	Msa1459390:intergenic	40.0%
!!	AAGAAGGGTTTGGTTCTGAA+AGG	-	tig0040221:3922-3941	Msa1459390:intron	40.0%
	GAATGAGCCTATTAGTGTGA+AGG	-	tig0040221:3977-3996	Msa1459390:intron	40.0%
	TTTCTCTTGTGAACAAACCC+TGG	+	tig0040221:4051-4070	Msa1459390:intergenic	40.0%
!!	AACGAGTTTTGATGACTGGT+CGG	-	tig0040221:4073-4092	Msa1459390:CDS	40.0%
	AATGCAAGCATTTCACCTTC+TGG	-	tig0040221:4143-4162	Msa1459390:CDS	40.0%
!	TCACCTTCTGGTAAAGTATC+TGG	-	tig0040221:4155-4174	Msa1459390:intron	40.0%
!	CACCTTCTGGTAAAGTATCT+GGG	-	tig0040221:4156-4175	Msa1459390:intron	40.0%
	TTCCCAGATACTTTACCAGA+AGG	+	tig0040221:4161-4180	Msa1459390:intergenic	40.0%
!	TGGTAAAGTATCTGGGAAGT+TGG	-	tig0040221:4163-4182	Msa1459390:intron	40.0%
!!	TTCTGAAGCTGAAGTCTTGT+TGG	-	tig0040221:4208-4227	Msa1459390:intron	40.0%
!!	TGAAGCGTTTTGTGAACATC+AGG	-	tig0040221:4357-4376	Msa1459390:intron	40.0%
!	CGTTTTGTGAACATCAGGAA+AGG	-	tig0040221:4362-4381	Msa1459390:intron	40.0%
	GCAGAATAAAAAGAGGTGGA+TGG	-	tig0040221:4450-4469	Msa1459390:intron	40.0%
	GAGTTCAGTGAGGTATACAT+TGG	-	tig0040221:4472-4491	Msa1459390:CDS	40.0%
	GAGCTCACAAAGGACTAATA+TGG	-	tig0040221:4506-4525	Msa1459390:intron	40.0%
	CTAGCCAAATACTGACCATT+GGG	+	tig0040221:4547-4566	Msa1459390:intergenic	40.0%
	ACTAGCCAAATACTGACCAT+TGG	+	tig0040221:4548-4567	Msa1459390:intergenic	40.0%
	AATGGTCAGTATTTGGCTAG+TGG	-	tig0040221:4547-4566	Msa1459390:intron	40.0%
	TCGCCACTTCAAGAATTGTT+TGG	-	tig0040221:4670-4689	Msa1459390:CDS	40.0%
	TGGTCATTCCAGTGATATCT+TGG	-	tig0040221:4690-4709	Msa1459390:CDS	40.0%
	ACTCACATCTGAATTAGACC+AGG	+	tig0040221:4722-4741	Msa1459390:intergenic	40.0%
	GATTCTTCTTTCGTCTTCGA+TGG	-	tig0040221:4835-4854	Msa1459390:intron	40.0%
!	CTAAGTGTTTTCCCTCACAA+AGG	-	tig0040221:4899-4918	Msa1459390:intron	40.0%
	ACTTACCAAAGCCTTTGTGA+GGG	+	tig0040221:4913-4932	Msa1459390:intergenic	40.0%
	TACTTACCAAAGCCTTTGTG+AGG	+	tig0040221:4914-4933	Msa1459390:intergenic	40.0%
	GTGAAGAACGAGTTATTGAC+TGG	-	tig0040221:5167-5186	Msa1459390:CDS	40.0%
!	TATTGACTGGGCAGATATAC+GGG	-	tig0040221:5180-5199	Msa1459390:CDS	40.0%
!!!	TGCCGTTTTTATGTTGCTTC+AGG	-	tig0040221:5390-5409	Msa1459390:exon	40.0%
	TTGCTTCAGGTATGTACATG+TGG	-	tig0040221:5403-5422	Msa1459390:five_prime_UTR	40.0%
	CTCATGAATGTAGCAGCAAT+TGG	+	tig0040221:5433-5452	Msa1459390:intergenic	40.0%
	GCATTAGGCAACAAGATTAC+TGG	-	tig0040221:5556-5575	Msa1459390:five_prime_UTR	40.0%
	CAACAAGATTACTGGCATTC+AGG	-	tig0040221:5564-5583	Msa1459390:five_prime_UTR	40.0%
	TGGAAGAACTGCAAACAACA+TGG	+	tig0040221:5691-5710	Msa1459390:intergenic	40.0%
!	GTCAGTTTTCTCGTTCTATC+AGG	-	tig0040221:5988-6007	Msa1459390:five_prime_UTR	40.0%
	TCCGGTTCATTTACATCAAG+TGG	-	tig0040221:6036-6055	Msa1459390:five_prime_UTR	40.0%
	CCCACTTGATGTAAATGAAC+CGG	+	tig0040221:6040-6059	Msa1459390:intergenic	40.0%
	CCGGTTCATTTACATCAAGT+GGG	-	tig0040221:6037-6056	Msa1459390:five_prime_UTR	40.0%
!	TTCATTGATGGTACATGTCG+AGG	-	tig0040221:6333-6352	Msa1459390:intron	40.0%
	GAGGTTCTACTTCTATGACA+TGG	-	tig0040221:6352-6371	Msa1459390:intron	40.0%
	TGAGGAGAAACTTCCAACAT+GGG	-	tig0040221:6377-6396	Msa1459390:intron	40.0%
	ACAAGAGGTAAATCCCATGT+TGG	+	tig0040221:6393-6412	Msa1459390:intergenic	40.0%
	TGTCACGAAGATAGTAGCTA+TGG	-	tig0040221:6441-6460	Msa1459390:intron	40.0%
	ACGAAGATAGTAGCTATGGA+AGG	-	tig0040221:6445-6464	Msa1459390:intron	40.0%
	TAACAGGCAAGCCAAAATTG+TGG	+	tig0040221:6536-6555	Msa1459390:intergenic	40.0%
!!!	ACAATTTTGGCTTGCCTGTT+AGG	-	tig0040221:6535-6554	Msa1459390:five_prime_UTR	40.0%
!!!	GAAAAGTTTTGGCTCGGTAA+AGG	-	tig0040221:6598-6617	Msa1459390:intron	40.0%
!	AGGTGTAAATTTTCACGTGG+TGG	-	tig0040221:6618-6637	Msa1459390:intron	40.0%
	TGGTTATATCATCTGCGTAC+AGG	-	tig0040221:6699-6718	Msa1459390:intron	40.0%
	CAAGAACTTGACATCCATCA+TGG	+	tig0040221:6742-6761	Msa1459390:intergenic	40.0%
	GCCTTCAATGTCGTGAATTT+AGG	-	tig0040221:6799-6818	Msa1459390:five_prime_UTR	40.0%
	GCCTAAATTCACGACATTGA+AGG	+	tig0040221:6803-6822	Msa1459390:intergenic	40.0%
	ATGGTCTGTTAGGTGGTCAT+AGG	+	tig0040221:2900-2919	None:intergenic	45.0%
	TGGTTACCAAGCATATGCAG+AGG	-	tig0040221:3318-3337	Msa1459390:CDS	45.0%
	CTATAGTCTATTGGGGTTGG+TGG	-	tig0040221:3540-3559	Msa1459390:CDS	45.0%
!!	GTTTTAGCCGAAGAAGGGTT+TGG	-	tig0040221:3912-3931	Msa1459390:intron	45.0%
!	AAGAAGGGAACGTTTTCTGC+AGG	-	tig0040221:4001-4020	Msa1459390:intron	45.0%
!	AGAAGGGAACGTTTTCTGCA+GGG	-	tig0040221:4002-4021	Msa1459390:intron	45.0%
	AACATCAGGAAAGGCGACAA+AGG	-	tig0040221:4371-4390	Msa1459390:intron	45.0%
	CAGTCCCAATGGTCAGTATT+TGG	-	tig0040221:4540-4559	Msa1459390:intron	45.0%
	TTTGGAAGGGAAACAAAGGG+AGG	+	tig0040221:4628-4647	Msa1459390:intergenic	45.0%
	GGCCAAATCCAAGATATCAC+TGG	+	tig0040221:4701-4720	Msa1459390:intergenic	45.0%
	GTGATATCTTGGATTTGGCC+TGG	-	tig0040221:4701-4720	Msa1459390:CDS	45.0%
	TGGATAAAACTGTTCGCGCT+TGG	-	tig0040221:4855-4874	Msa1459390:intron	45.0%
!	GTTTTCCCTCACAAAGGCTT+TGG	-	tig0040221:4905-4924	Msa1459390:intron	45.0%
	CATGTGCAGGGATTTGTAGT+TGG	-	tig0040221:5351-5370	Msa1459390:CDS	45.0%
	TATTTATCTGCGCCTCAAGC+TGG	+	tig0040221:5519-5538	Msa1459390:intergenic	45.0%
	GAGGCGCAGATAAATATCCA+TGG	-	tig0040221:5523-5542	Msa1459390:five_prime_UTR	45.0%
	GCGTAACTGTTGCAATACCT+TGG	-	tig0040221:6181-6200	Msa1459390:intron	45.0%
	ACTGTTGCAATACCTTGGTG+TGG	-	tig0040221:6186-6205	Msa1459390:intron	45.0%
!	TCTGTTTTCATGCCACACCA+AGG	+	tig0040221:6201-6220	Msa1459390:intergenic	45.0%
	GGCATGAAAACAGATAGACG+TGG	-	tig0040221:6207-6226	Msa1459390:intron	45.0%
	GGAAGCAAAAACCAAGCTAG+AGG	-	tig0040221:6260-6279	Msa1459390:intron	45.0%
	CTCAGAAGTAACCTCTAGCT+TGG	+	tig0040221:6274-6293	Msa1459390:intergenic	45.0%
	CAAGCTAGAGGTTACTTCTG+AGG	-	tig0040221:6272-6291	Msa1459390:intron	45.0%
	TACTTCTATGACATGGCCTG+AGG	-	tig0040221:6359-6378	Msa1459390:intron	45.0%
	CATGTTGGAAGTTTCTCCTC+AGG	+	tig0040221:6378-6397	Msa1459390:intergenic	45.0%
	CTGAGGAGAAACTTCCAACA+TGG	-	tig0040221:6376-6395	Msa1459390:intron	45.0%
	GCATTGTCCTAAAGCCTAAC+AGG	+	tig0040221:6552-6571	Msa1459390:intergenic	45.0%
!	GAAGGTGGATTTGAAGCTTG+TGG	-	tig0040221:6679-6698	Msa1459390:intron	45.0%
	ATGTCGTGAATTTAGGCCAC+AGG	-	tig0040221:6806-6825	Msa1459390:five_prime_UTR	45.0%
	ATGGTCTGTTAGGTGGTCAT+AGG	+	tig0040221:2900-2919	Msa0071240:intergenic	45.0%
	TGGTTACCAAGCATATGCAG+AGG	-	tig0040221:3318-3337	Msa1459390:CDS	45.0%
	CTATAGTCTATTGGGGTTGG+TGG	-	tig0040221:3540-3559	Msa1459390:CDS	45.0%
!!	GTTTTAGCCGAAGAAGGGTT+TGG	-	tig0040221:3912-3931	Msa1459390:intron	45.0%
!	AAGAAGGGAACGTTTTCTGC+AGG	-	tig0040221:4001-4020	Msa1459390:intron	45.0%
!	AGAAGGGAACGTTTTCTGCA+GGG	-	tig0040221:4002-4021	Msa1459390:intron	45.0%
	AACATCAGGAAAGGCGACAA+AGG	-	tig0040221:4371-4390	Msa1459390:intron	45.0%
	CAGTCCCAATGGTCAGTATT+TGG	-	tig0040221:4540-4559	Msa1459390:intron	45.0%
	TTTGGAAGGGAAACAAAGGG+AGG	+	tig0040221:4628-4647	Msa1459390:intergenic	45.0%
	GGCCAAATCCAAGATATCAC+TGG	+	tig0040221:4701-4720	Msa1459390:intergenic	45.0%
	GTGATATCTTGGATTTGGCC+TGG	-	tig0040221:4701-4720	Msa1459390:CDS	45.0%
	TGGATAAAACTGTTCGCGCT+TGG	-	tig0040221:4855-4874	Msa1459390:intron	45.0%
!	GTTTTCCCTCACAAAGGCTT+TGG	-	tig0040221:4905-4924	Msa1459390:intron	45.0%
	CATGTGCAGGGATTTGTAGT+TGG	-	tig0040221:5351-5370	Msa1459390:CDS	45.0%
	TATTTATCTGCGCCTCAAGC+TGG	+	tig0040221:5519-5538	Msa1459390:intergenic	45.0%
	GAGGCGCAGATAAATATCCA+TGG	-	tig0040221:5523-5542	Msa1459390:five_prime_UTR	45.0%
	GCGTAACTGTTGCAATACCT+TGG	-	tig0040221:6181-6200	Msa1459390:intron	45.0%
	ACTGTTGCAATACCTTGGTG+TGG	-	tig0040221:6186-6205	Msa1459390:intron	45.0%
!	TCTGTTTTCATGCCACACCA+AGG	+	tig0040221:6201-6220	Msa1459390:intergenic	45.0%
	GGCATGAAAACAGATAGACG+TGG	-	tig0040221:6207-6226	Msa1459390:intron	45.0%
	GGAAGCAAAAACCAAGCTAG+AGG	-	tig0040221:6260-6279	Msa1459390:intron	45.0%
	CTCAGAAGTAACCTCTAGCT+TGG	+	tig0040221:6274-6293	Msa1459390:intergenic	45.0%
	CAAGCTAGAGGTTACTTCTG+AGG	-	tig0040221:6272-6291	Msa1459390:intron	45.0%
	TACTTCTATGACATGGCCTG+AGG	-	tig0040221:6359-6378	Msa1459390:intron	45.0%
	CATGTTGGAAGTTTCTCCTC+AGG	+	tig0040221:6378-6397	Msa1459390:intergenic	45.0%
	CTGAGGAGAAACTTCCAACA+TGG	-	tig0040221:6376-6395	Msa1459390:intron	45.0%
	GCATTGTCCTAAAGCCTAAC+AGG	+	tig0040221:6552-6571	Msa1459390:intergenic	45.0%
!	GAAGGTGGATTTGAAGCTTG+TGG	-	tig0040221:6679-6698	Msa1459390:intron	45.0%
	ATGTCGTGAATTTAGGCCAC+AGG	-	tig0040221:6806-6825	Msa1459390:five_prime_UTR	45.0%
!!	GGGTTTGGTTCTGAAAGGAG+AGG	-	tig0040221:3927-3946	Msa1459390:intron	50.0%
!	GGAACGTTTTCTGCAGGGTA+TGG	-	tig0040221:4007-4026	Msa1459390:intron	50.0%
!	TGATGACTGGTCGGTCACAT+TGG	-	tig0040221:4082-4101	Msa1459390:CDS	50.0%
!	GATGACTGGTCGGTCACATT+GGG	-	tig0040221:4083-4102	Msa1459390:CDS	50.0%
!	ATGACTGGTCGGTCACATTG+GGG	-	tig0040221:4084-4103	Msa1459390:CDS	50.0%
!	TCTGGGAAGTTGGTTCTCTC+TGG	-	tig0040221:4173-4192	Msa1459390:intron	50.0%
!	GGAAGTTGGTTCTCTCTGGA+TGG	-	tig0040221:4177-4196	Msa1459390:intron	50.0%
!	CAAGAGCACAGACAGAGAGA+AGG	-	tig0040221:4275-4294	Msa1459390:intron	50.0%
	GGTCAGTATTTGGCTAGTGG+AGG	-	tig0040221:4550-4569	Msa1459390:intron	50.0%
	TTGGCTAGTGGAGGTGAAGA+TGG	-	tig0040221:4559-4578	Msa1459390:intron	50.0%
	AAGATGGCGTTGTGCGCATA+TGG	-	tig0040221:4575-4594	Msa1459390:intron	50.0%
	GAAGGGAAACAAAGGGAGGA+CGG	+	tig0040221:4624-4643	Msa1459390:intergenic	50.0%
	TCGTTCTATCAGGCCTTCCA+TGG	-	tig0040221:5998-6017	Msa1459390:five_prime_UTR	50.0%
	TCTGACTTCCTGACCATGGA+AGG	+	tig0040221:6014-6033	Msa1459390:intergenic	50.0%
	GACATCTGACTTCCTGACCA+TGG	+	tig0040221:6018-6037	Msa1459390:intergenic	50.0%
	TGGTCAGGAAGTCAGATGTC+CGG	-	tig0040221:6018-6037	Msa1459390:five_prime_UTR	50.0%
	AGGACTCGCGCGTGTATATT+TGG	-	tig0040221:6082-6101	Msa1459390:five_prime_UTR	50.0%
	TGCAACAGTTACGCCCTTGA+AGG	+	tig0040221:6175-6194	Msa1459390:intergenic	50.0%
	GGTCTAACGATAGTAGCAGC+TGG	-	tig0040221:6486-6505	Msa1459390:intron	50.0%
	ATAGTAGCAGCTGGCAGTGA+TGG	-	tig0040221:6495-6514	Msa1459390:intron	50.0%
!	TGGCTTGCCTGTTAGGCTTT+AGG	-	tig0040221:6542-6561	Msa1459390:five_prime_UTR	50.0%
	AGGATTCTTTGCATGGCCTG+TGG	+	tig0040221:6825-6844	Msa1459390:intergenic	50.0%
!!	GGGTTTGGTTCTGAAAGGAG+AGG	-	tig0040221:3927-3946	Msa1459390:intron	50.0%
!	GGAACGTTTTCTGCAGGGTA+TGG	-	tig0040221:4007-4026	Msa1459390:intron	50.0%
!	TGATGACTGGTCGGTCACAT+TGG	-	tig0040221:4082-4101	Msa1459390:CDS	50.0%
!	GATGACTGGTCGGTCACATT+GGG	-	tig0040221:4083-4102	Msa1459390:CDS	50.0%
!	ATGACTGGTCGGTCACATTG+GGG	-	tig0040221:4084-4103	Msa1459390:CDS	50.0%
!	TCTGGGAAGTTGGTTCTCTC+TGG	-	tig0040221:4173-4192	Msa1459390:intron	50.0%
!	GGAAGTTGGTTCTCTCTGGA+TGG	-	tig0040221:4177-4196	Msa1459390:intron	50.0%
!	CAAGAGCACAGACAGAGAGA+AGG	-	tig0040221:4275-4294	Msa1459390:intron	50.0%
	GGTCAGTATTTGGCTAGTGG+AGG	-	tig0040221:4550-4569	Msa1459390:intron	50.0%
	TTGGCTAGTGGAGGTGAAGA+TGG	-	tig0040221:4559-4578	Msa1459390:intron	50.0%
	AAGATGGCGTTGTGCGCATA+TGG	-	tig0040221:4575-4594	Msa1459390:intron	50.0%
	GAAGGGAAACAAAGGGAGGA+CGG	+	tig0040221:4624-4643	Msa1459390:intergenic	50.0%
	TCGTTCTATCAGGCCTTCCA+TGG	-	tig0040221:5998-6017	Msa1459390:five_prime_UTR	50.0%
	TCTGACTTCCTGACCATGGA+AGG	+	tig0040221:6014-6033	Msa1459390:intergenic	50.0%
	GACATCTGACTTCCTGACCA+TGG	+	tig0040221:6018-6037	Msa1459390:intergenic	50.0%
	TGGTCAGGAAGTCAGATGTC+CGG	-	tig0040221:6018-6037	Msa1459390:five_prime_UTR	50.0%
	AGGACTCGCGCGTGTATATT+TGG	-	tig0040221:6082-6101	Msa1459390:five_prime_UTR	50.0%
	TGCAACAGTTACGCCCTTGA+AGG	+	tig0040221:6175-6194	Msa1459390:intergenic	50.0%
	GGTCTAACGATAGTAGCAGC+TGG	-	tig0040221:6486-6505	Msa1459390:intron	50.0%
	ATAGTAGCAGCTGGCAGTGA+TGG	-	tig0040221:6495-6514	Msa1459390:intron	50.0%
!	TGGCTTGCCTGTTAGGCTTT+AGG	-	tig0040221:6542-6561	Msa1459390:five_prime_UTR	50.0%
	AGGATTCTTTGCATGGCCTG+TGG	+	tig0040221:6825-6844	Msa1459390:intergenic	50.0%
	AAGGCGGCGTGAGTATGAAG+TGG	-	tig0040221:4241-4260	Msa1459390:intron	55.0%
	GCACAGACAGAGAGAAGGTG+AGG	-	tig0040221:4280-4299	Msa1459390:intron	55.0%
	GAGGTGGATGGAGTTCAGTG+AGG	-	tig0040221:4462-4481	Msa1459390:CDS	55.0%
	CTATCAGGCCTTCCATGGTC+AGG	-	tig0040221:6003-6022	Msa1459390:five_prime_UTR	55.0%
	AAGGCGGCGTGAGTATGAAG+TGG	-	tig0040221:4241-4260	Msa1459390:intron	55.0%
	GCACAGACAGAGAGAAGGTG+AGG	-	tig0040221:4280-4299	Msa1459390:intron	55.0%
	GAGGTGGATGGAGTTCAGTG+AGG	-	tig0040221:4462-4481	Msa1459390:CDS	55.0%
	CTATCAGGCCTTCCATGGTC+AGG	-	tig0040221:6003-6022	Msa1459390:five_prime_UTR	55.0%
	CTGGTCGGTCACATTGGGGT+CGG	-	tig0040221:4088-4107	Msa1459390:CDS	60.0%
	ATTGGGGTCGGAGAGGATCG+TGG	-	tig0040221:4100-4119	Msa1459390:CDS	60.0%
	GAGAGGATCGTGGCAAGCAG+TGG	-	tig0040221:4110-4129	Msa1459390:CDS	60.0%
	CTGGTCGGTCACATTGGGGT+CGG	-	tig0040221:4088-4107	Msa1459390:CDS	60.0%
	ATTGGGGTCGGAGAGGATCG+TGG	-	tig0040221:4100-4119	Msa1459390:CDS	60.0%
	GAGAGGATCGTGGCAAGCAG+TGG	-	tig0040221:4110-4129	Msa1459390:CDS	60.0%
	CGGTCACATTGGGGTCGGAG+AGG	-	tig0040221:4093-4112	Msa1459390:CDS	65.0%
	CGGTCACATTGGGGTCGGAG+AGG	-	tig0040221:4093-4112	Msa1459390:CDS	65.0%

Chromosome	Type	Strat	End	Strand	Name
tig0040221	gene	2890	6979	2890	ID=Msa1459390;Name=Msa1459390
tig0040221	mRNA	2890	6979	2890	ID=Msa1459390-mRNA-1;Parent=Msa1459390;Name=Msa1459390-mRNA-1;_AED=0.14;_eAED=0.14;_QI=1027\|1\|1\|1\|0.75\|0.66\|9\|416\|431
tig0040221	exon	2890	3859	2890	ID=Msa1459390-mRNA-1:exon:22250;Parent=Msa1459390-mRNA-1
tig0040221	exon	4073	4166	4073	ID=Msa1459390-mRNA-1:exon:22249;Parent=Msa1459390-mRNA-1
tig0040221	exon	4284	4363	4284	ID=Msa1459390-mRNA-1:exon:22248;Parent=Msa1459390-mRNA-1
tig0040221	exon	4458	4509	4458	ID=Msa1459390-mRNA-1:exon:22247;Parent=Msa1459390-mRNA-1
tig0040221	exon	4629	4786	4629	ID=Msa1459390-mRNA-1:exon:22246;Parent=Msa1459390-mRNA-1
tig0040221	exon	4943	5033	4943	ID=Msa1459390-mRNA-1:exon:22245;Parent=Msa1459390-mRNA-1
tig0040221	exon	5134	6177	5134	ID=Msa1459390-mRNA-1:exon:22244;Parent=Msa1459390-mRNA-1
tig0040221	exon	6530	6594	6530	ID=Msa1459390-mRNA-1:exon:22243;Parent=Msa1459390-mRNA-1
tig0040221	exon	6795	6979	6795	ID=Msa1459390-mRNA-1:exon:22242;Parent=Msa1459390-mRNA-1
tig0040221	five_prime_UTR	6795	6979	6795	ID=Msa1459390-mRNA-1:five_prime_utr;Parent=Msa1459390-mRNA-1
tig0040221	five_prime_UTR	6530	6594	6530	ID=Msa1459390-mRNA-1:five_prime_utr;Parent=Msa1459390-mRNA-1
tig0040221	five_prime_UTR	5401	6177	5401	ID=Msa1459390-mRNA-1:five_prime_utr;Parent=Msa1459390-mRNA-1
tig0040221	CDS	5134	5400	5134	ID=Msa1459390-mRNA-1:cds;Parent=Msa1459390-mRNA-1
tig0040221	CDS	4943	5033	4943	ID=Msa1459390-mRNA-1:cds;Parent=Msa1459390-mRNA-1
tig0040221	CDS	4629	4786	4629	ID=Msa1459390-mRNA-1:cds;Parent=Msa1459390-mRNA-1
tig0040221	CDS	4458	4509	4458	ID=Msa1459390-mRNA-1:cds;Parent=Msa1459390-mRNA-1
tig0040221	CDS	4284	4363	4284	ID=Msa1459390-mRNA-1:cds;Parent=Msa1459390-mRNA-1
tig0040221	CDS	4073	4166	4073	ID=Msa1459390-mRNA-1:cds;Parent=Msa1459390-mRNA-1
tig0040221	CDS	3306	3859	3306	ID=Msa1459390-mRNA-1:cds;Parent=Msa1459390-mRNA-1
tig0040221	three_prime_UTR	2890	3305	2890	ID=Msa1459390-mRNA-1:three_prime_utr;Parent=Msa1459390-mRNA-1

Gene Sequence

>Msa1459390

ATGGAGTTCAGTGAGGTATACATTGGACAAGAAATTAGAGCTCACAAAGGACTAATATGGACTATGAAATTCAGTCCCAATGGTCAGTATTTGGCTAGTGGAGGTGAAGATGGCGTTGTGCGCATATGGCGCGTTTTGTCACGTGACAAAAGCCGTCCTCCCTTTGTTTCCCTTCCAAATGATATTTTTCAAATTGAGGAATCGCCACTTCAAGAATTGTTTGGTCATTCCAGTGATATCTTGGATTTGGCCTGGTCTAATTCAGATATTCTTCTTTCGTCTTCGATGGATAAAACTGTTCGCGCTTGGAAAATCAGTTGTGATCAATGTCTAAGTGTTTTCCCTCACAAAGGCTTTGTGACATGCATTCAATTCAACCCTGTCAATGAAAATTACTTTATCAGTGGATCCATTGATGGTAAAGTTCGAATATGGGGAATACGTGAAGAACGAGTTATTGACTGGGCAGATATACGGGATGTCATAAGTGCTATAAGTTATCAACAAGATGGAAAAGGATTTGTAGTTGGTTCTCTTACAGGCACATGCCGTTTTTATGTTGCTTCAGGAAAATATTTCCAGCTTGAGGCGCAGATAAATATCCATGGAAAGAAGAAAGCATTAGGCAACAAGATTACTGGCATTCAGTTCTTCCAAAACAACTGTCAGAGAATTATGATCACATCTGAAGATTCCAAAATCTGCATATTGGATCGAACTGAGATTGTTCAGAAATACAAAGGCCTTCCATGGTCAGGAAGTCAGATGTCCGGTTCATTTACATCAAGTGGGAAACATATCATTTCAGTTGGAGAGGACTCGCGCGTGTATATTTGGAACTTCAATGACTTCAAAAGTGGTTCTTCGAAAAAAATGAAATCGGACTATTCTTGTGAGTACTTTTCCTTCAAGGGCGTAACTGTTGCAATACCTTGGTGTGGCATGAAAACAGATAGACGTGGCTGTAGAATTAACTTTTCTCACTATTCTCTGGAAGCAAAAACCAAGCTAGAGGTTACTTCTGAGGTTAGAGATACAGAACGATTTTCTCTTGGTAATTGGTTCTTCATTGATGGTACATGTCGAGGTTCTACTTCTATGACATGGCCTGAGGAGAAACTTCCAACATGGGATTTACCTCTTGTAGAAGATGAATGTGATCATCAAAATTTATGTCACGAAGATAGTAGCTATGGAAGGAATATATCAGAAACATGGGGTCTAACGATAGTAGCAGCTGGCAGTGATGGAACTATCAAGACATTCCACAATTTTGGCTTGCCTGTTAGGCTTTAG

Protein sequence

>Msa1459390

MEFSEVYIGQEIRAHKGLIWTMKFSPNGQYLASGGEDGVVRIWRVLSRDKSRPPFVSLPNDIFQIEESPLQELFGHSSDILDLAWSNSDILLSSSMDKTVRAWKISCDQCLSVFPHKGFVTCIQFNPVNENYFISGSIDGKVRIWGIREERVIDWADIRDVISAISYQQDGKGFVVGSLTGTCRFYVASGKYFQLEAQINIHGKKKALGNKITGIQFFQNNCQRIMITSEDSKICILDRTEIVQKYKGLPWSGSQMSGSFTSSGKHIISVGEDSRVYIWNFNDFKSGSSKKMKSDYSCEYFSFKGVTVAIPWCGMKTDRRGCRINFSHYSLEAKTKLEVTSEVRDTERFSLGNWFFIDGTCRGSTSMTWPEEKLPTWDLPLVEDECDHQNLCHEDSSYGRNISETWGLTIVAAGSDGTIKTFHNFGLPVRL*