Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0264010 | XP_003597322.1 | 100.000 | 154 | 0 | 0 | 1 | 154 | 1 | 154 | 3.58e-103 | 302 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0264010 | sp|Q9AT35|RL23A_DAUCA | 87.013 | 154 | 20 | 0 | 1 | 154 | 1 | 154 | 1.71e-83 | 245 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0264010 | B7FGR0 | 100.000 | 154 | 0 | 0 | 1 | 154 | 1 | 154 | 1.71e-103 | 302 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000100 | Msa0264010 | 0.813916 | 2.008345e-51 | -8.615850e-47 |
| Msa0002750 | Msa0264010 | 0.878117 | 3.638748e-69 | -8.615850e-47 |
| Msa0002790 | Msa0264010 | 0.866838 | 2.127900e-65 | -8.615850e-47 |
| Msa0003780 | Msa0264010 | 0.890631 | 8.271431e-74 | -8.615850e-47 |
| Msa0022970 | Msa0264010 | 0.864984 | 8.204467e-65 | -8.615850e-47 |
| Msa0032090 | Msa0264010 | 0.815835 | 7.540725e-52 | -8.615850e-47 |
| Msa0032780 | Msa0264010 | 0.851293 | 9.750721e-61 | -8.615850e-47 |
| Msa0040690 | Msa0264010 | 0.828760 | 7.513606e-55 | -8.615850e-47 |
| Msa0045730 | Msa0264010 | 0.825577 | 4.346316e-54 | -8.615850e-47 |
| Msa0074030 | Msa0264010 | 0.861176 | 1.232711e-63 | -8.615850e-47 |
| Msa0085780 | Msa0264010 | 0.827495 | 1.516211e-54 | -8.615850e-47 |
| Msa0086750 | Msa0264010 | 0.844912 | 5.635230e-59 | -8.615850e-47 |
| Msa0087910 | Msa0264010 | 0.802083 | 6.639241e-49 | -8.615850e-47 |
| Msa0091880 | Msa0264010 | 0.864121 | 1.526843e-64 | -8.615850e-47 |
| Msa0116130 | Msa0264010 | 0.803372 | 3.596942e-49 | -8.615850e-47 |
| Msa0116670 | Msa0264010 | 0.849033 | 4.192681e-60 | -8.615850e-47 |
| Msa0118710 | Msa0264010 | 0.810370 | 1.192355e-50 | -8.615850e-47 |
| Msa0133540 | Msa0264010 | 0.864914 | 8.625425e-65 | -8.615850e-47 |
| Msa0140890 | Msa0264010 | 0.819287 | 1.257288e-52 | -8.615850e-47 |
| Msa0146340 | Msa0264010 | 0.900998 | 4.177002e-78 | -8.615850e-47 |
| Msa0172900 | Msa0264010 | 0.848078 | 7.706930e-60 | -8.615850e-47 |
| Msa0173530 | Msa0264010 | 0.848455 | 6.064685e-60 | -8.615850e-47 |
| Msa0181490 | Msa0264010 | 0.846550 | 2.024012e-59 | -8.615850e-47 |
| Msa0184650 | Msa0264010 | 0.872221 | 3.757874e-67 | -8.615850e-47 |
| Msa0187930 | Msa0264010 | 0.823338 | 1.461997e-53 | -8.615850e-47 |
| Msa0189700 | Msa0264010 | 0.822959 | 1.791436e-53 | -8.615850e-47 |
| Msa0194540 | Msa0264010 | 0.813230 | 2.843390e-51 | -8.615850e-47 |
| Msa0202020 | Msa0264010 | 0.811944 | 5.433137e-51 | -8.615850e-47 |
| Msa0210330 | Msa0264010 | 0.824142 | 9.472466e-54 | -8.615850e-47 |
| Msa0210360 | Msa0264010 | 0.840290 | 9.508005e-58 | -8.615850e-47 |
| Msa0218830 | Msa0264010 | 0.805137 | 1.543581e-49 | -8.615850e-47 |
| Msa0222730 | Msa0264010 | 0.937292 | 4.393431e-98 | -8.615850e-47 |
| Msa0223950 | Msa0264010 | 0.808526 | 2.965966e-50 | -8.615850e-47 |
| Msa0230490 | Msa0264010 | 0.877873 | 4.430593e-69 | -8.615850e-47 |
| Msa0232010 | Msa0264010 | 0.821307 | 4.328633e-53 | -8.615850e-47 |
| Msa0232080 | Msa0264010 | 0.824133 | 9.519063e-54 | -8.615850e-47 |
| Msa0244780 | Msa0264010 | 0.827873 | 1.229717e-54 | -8.615850e-47 |
| Msa0250820 | Msa0264010 | 0.904336 | 1.364724e-79 | -8.615850e-47 |
| Msa0250870 | Msa0264010 | 0.852880 | 3.451970e-61 | -8.615850e-47 |
| Msa0258850 | Msa0264010 | 0.816544 | 5.236623e-52 | -8.615850e-47 |
| Msa0264010 | Msa0268130 | 0.824958 | 6.088790e-54 | -8.615850e-47 |
| Msa0264010 | Msa0289580 | 0.864511 | 1.153378e-64 | -8.615850e-47 |
| Msa0264010 | Msa0289610 | 0.867003 | 1.885232e-65 | -8.615850e-47 |
| Msa0264010 | Msa0298140 | 0.806735 | 7.120004e-50 | -8.615850e-47 |
| Msa0264010 | Msa0298200 | 0.810879 | 9.256133e-51 | -8.615850e-47 |
| Msa0264010 | Msa0298990 | 0.831590 | 1.531223e-55 | -8.615850e-47 |
| Msa0264010 | Msa0306690 | 0.823594 | 1.273369e-53 | -8.615850e-47 |
| Msa0264010 | Msa0321640 | 0.802561 | 5.292325e-49 | -8.615850e-47 |
| Msa0264010 | Msa0327300 | 0.890963 | 6.124799e-74 | -8.615850e-47 |
| Msa0264010 | Msa0327330 | 0.901542 | 2.411878e-78 | -8.615850e-47 |
| Msa0264010 | Msa0336010 | 0.858572 | 7.514871e-63 | -8.615850e-47 |
| Msa0264010 | Msa0342850 | 0.895765 | 7.022416e-76 | -8.615850e-47 |
| Msa0264010 | Msa0348830 | 0.801366 | 9.314932e-49 | -8.615850e-47 |
| Msa0264010 | Msa0393280 | 0.811453 | 6.948602e-51 | -8.615850e-47 |
| Msa0264010 | Msa0472550 | 0.805610 | 1.228390e-49 | -8.615850e-47 |
| Msa0264010 | Msa0481850 | 0.840388 | 8.962225e-58 | -8.615850e-47 |
| Msa0264010 | Msa0483110 | 0.896591 | 3.184722e-76 | -8.615850e-47 |
| Msa0264010 | Msa0526540 | 0.830404 | 2.993396e-55 | -8.615850e-47 |
| Msa0264010 | Msa0557720 | 0.844049 | 9.615836e-59 | -8.615850e-47 |
| Msa0264010 | Msa0576940 | 0.826379 | 2.802283e-54 | -8.615850e-47 |
| Msa0264010 | Msa0588360 | 0.825205 | 5.321865e-54 | -8.615850e-47 |
| Msa0264010 | Msa0603320 | 0.814849 | 1.249642e-51 | -8.615850e-47 |
| Msa0264010 | Msa0608260 | 0.804743 | 1.866111e-49 | -8.615850e-47 |
| Msa0264010 | Msa0615440 | 0.830467 | 2.889117e-55 | -8.615850e-47 |
| Msa0264010 | Msa0622750 | 0.866317 | 3.113719e-65 | -8.615850e-47 |
| Msa0264010 | Msa0623200 | 0.833750 | 4.456202e-56 | -8.615850e-47 |
| Msa0264010 | Msa0626290 | 0.808179 | 3.517463e-50 | -8.615850e-47 |
| Msa0264010 | Msa0688850 | 0.828339 | 9.496160e-55 | -8.615850e-47 |
| Msa0264010 | Msa0691330 | 0.809093 | 2.243764e-50 | -8.615850e-47 |
| Msa0264010 | Msa0698490 | 0.829210 | 5.847010e-55 | -8.615850e-47 |
| Msa0264010 | Msa0698660 | 0.831158 | 1.955540e-55 | -8.615850e-47 |
| Msa0264010 | Msa0698780 | 0.810013 | 1.423133e-50 | -8.615850e-47 |
| Msa0264010 | Msa0780490 | 0.844535 | 7.118451e-59 | -8.615850e-47 |
| Msa0264010 | Msa0785130 | 0.804552 | 2.044684e-49 | -8.615850e-47 |
| Msa0264010 | Msa0789930 | 0.839453 | 1.570155e-57 | -8.615850e-47 |
| Msa0264010 | Msa0817540 | 0.809405 | 1.923159e-50 | -8.615850e-47 |
| Msa0264010 | Msa0867060 | 0.804819 | 1.798423e-49 | -8.615850e-47 |
| Msa0264010 | Msa0881290 | 0.822584 | 2.190669e-53 | -8.615850e-47 |
| Msa0264010 | Msa0953310 | 0.831706 | 1.433565e-55 | -8.615850e-47 |
| Msa0264010 | Msa1006840 | 0.817333 | 3.481334e-52 | -8.615850e-47 |
| Msa0264010 | Msa1010310 | 0.820779 | 5.726387e-53 | -8.615850e-47 |
| Msa0264010 | Msa1012740 | 0.853395 | 2.457756e-61 | -8.615850e-47 |
| Msa0264010 | Msa1012770 | 0.822070 | 2.883176e-53 | -8.615850e-47 |
| Msa0264010 | Msa1039520 | 0.819546 | 1.097201e-52 | -8.615850e-47 |
| Msa0264010 | Msa1043690 | 0.888041 | 8.392503e-73 | -8.615850e-47 |
| Msa0264010 | Msa1078870 | 0.823588 | 1.277697e-53 | -8.615850e-47 |
| Msa0264010 | Msa1078980 | 0.809012 | 2.334736e-50 | -8.615850e-47 |
| Msa0264010 | Msa1079920 | 0.833010 | 6.817178e-56 | -8.615850e-47 |
| Msa0264010 | Msa1080350 | 0.856369 | 3.370693e-62 | -8.615850e-47 |
| Msa0264010 | Msa1081150 | 0.805720 | 1.165021e-49 | -8.615850e-47 |
| Msa0264010 | Msa1088490 | 0.828962 | 6.715440e-55 | -8.615850e-47 |
| Msa0264010 | Msa1088940 | 0.843285 | 1.539791e-58 | -8.615850e-47 |
| Msa0264010 | Msa1104140 | 0.832189 | 1.089644e-55 | -8.615850e-47 |
| Msa0264010 | Msa1104210 | 0.801088 | 1.062029e-48 | -8.615850e-47 |
| Msa0264010 | Msa1124850 | 0.849252 | 3.643700e-60 | -8.615850e-47 |
| Msa0264010 | Msa1125860 | 0.854903 | 9.026230e-62 | -8.615850e-47 |
| Msa0264010 | Msa1126060 | 0.854359 | 1.297407e-61 | -8.615850e-47 |
| Msa0264010 | Msa1128120 | 0.895630 | 7.984122e-76 | -8.615850e-47 |
| Msa0264010 | Msa1135890 | 0.819554 | 1.092853e-52 | -8.615850e-47 |
| Msa0264010 | Msa1167540 | 0.829597 | 4.709975e-55 | -8.615850e-47 |
| Msa0264010 | Msa1167550 | 0.820750 | 5.814873e-53 | -8.615850e-47 |
| Msa0264010 | Msa1169180 | 0.809056 | 2.284543e-50 | -8.615850e-47 |
| Msa0264010 | Msa1181830 | 0.803233 | 3.844881e-49 | -8.615850e-47 |
| Msa0264010 | Msa1215820 | 0.878926 | 1.891405e-69 | -8.615850e-47 |
| Msa0264010 | Msa1266060 | 0.802976 | 4.345369e-49 | -8.615850e-47 |
| Msa0264010 | Msa1273340 | 0.801319 | 9.521858e-49 | -8.615850e-47 |
| Msa0264010 | Msa1295150 | 0.855751 | 5.113827e-62 | -8.615850e-47 |
| Msa0264010 | Msa1295170 | 0.875543 | 2.836529e-68 | -8.615850e-47 |
| Msa0264010 | Msa1299590 | 0.803579 | 3.259257e-49 | -8.615850e-47 |
| Msa0264010 | Msa1332250 | 0.836460 | 9.240396e-57 | -8.615850e-47 |
| Msa0264010 | Msa1338190 | 0.858261 | 9.303308e-63 | -8.615850e-47 |
| Msa0264010 | Msa1343260 | 0.833449 | 5.298141e-56 | -8.615850e-47 |
| Msa0264010 | Msa1362210 | 0.811495 | 6.805636e-51 | -8.615850e-47 |
| Msa0264010 | Msa1362790 | 0.804076 | 2.569141e-49 | -8.615850e-47 |
| Msa0264010 | Msa1363330 | 0.833747 | 4.465902e-56 | -8.615850e-47 |
| Msa0264010 | Msa1366180 | 0.845967 | 2.917875e-59 | -8.615850e-47 |
| Msa0264010 | Msa1374120 | 0.872275 | 3.604986e-67 | -8.615850e-47 |
| Msa0264010 | Msa1382620 | 0.823668 | 1.223379e-53 | -8.615850e-47 |
| Msa0264010 | Msa1386600 | 0.834565 | 2.784480e-56 | -8.615850e-47 |
| Msa0264010 | Msa1394290 | 0.805199 | 1.497821e-49 | -8.615850e-47 |
| Msa0264010 | Msa1399530 | 0.861356 | 1.086390e-63 | -8.615850e-47 |
| Msa0264010 | Msa1405930 | 0.803391 | 3.564609e-49 | -8.615850e-47 |
| Msa0264010 | Msa1407070 | 0.878874 | 1.971862e-69 | -8.615850e-47 |
| Msa0264010 | Msa1410440 | 0.804434 | 2.164267e-49 | -8.615850e-47 |
| Msa0264010 | Msa1413500 | 0.801138 | 1.037132e-48 | -8.615850e-47 |
| Msa0264010 | Msa1418690 | 0.822462 | 2.339157e-53 | -8.615850e-47 |
| Msa0264010 | Msa1426120 | 0.830375 | 3.042605e-55 | -8.615850e-47 |
| Msa0264010 | Msa1426490 | 0.807821 | 4.191943e-50 | -8.615850e-47 |
| Msa0264010 | Msa1448690 | 0.833651 | 4.719105e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0264010 | MtrunA17_Chr2g0327781 | 100.000 | 154 | 0 | 0 | 1 | 154 | 1 | 154 | 3.29e-107 | 302 |
| Msa0264010 | MtrunA17_Chr4g0030821 | 95.364 | 151 | 6 | 1 | 4 | 154 | 3 | 152 | 4.20e-81 | 236 |
| Msa0264010 | MtrunA17_Chr7g0222741 | 93.506 | 154 | 10 | 0 | 1 | 154 | 1 | 154 | 3.56e-71 | 211 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0264010 | AT3G55280.1 | 87.662 | 154 | 19 | 0 | 1 | 154 | 1 | 154 | 1.89e-71 | 212 |
| Msa0264010 | AT3G55280.2 | 87.662 | 154 | 19 | 0 | 1 | 154 | 1 | 154 | 1.89e-71 | 212 |
| Msa0264010 | AT2G39460.1 | 87.662 | 154 | 19 | 0 | 1 | 154 | 1 | 154 | 3.05e-68 | 204 |
| Msa0264010 | AT2G39460.2 | 87.662 | 154 | 19 | 0 | 1 | 154 | 1 | 154 | 3.05e-68 | 204 |
| Msa0264010 | AT3G55280.3 | 93.220 | 118 | 8 | 0 | 37 | 154 | 31 | 148 | 4.61e-67 | 201 |
Find 92 sgRNAs with CRISPR-Local
Find 177 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACAAGATTGGGATTATTTA+AGG | 0.136899 | 2_2:-63824205 | Msa0264010:exon |
| AGTTCGATTGCAATTAAATT+TGG | 0.183176 | 2_2:-63824059 | Msa0264010:three_prime_UTR |
| CAGCCAAGTGTTCCATTTAT+AGG | 0.202696 | 2_2:+63823608 | None:intergenic |
| CTTCTTTGCCTTCTTCTTGA+TGG | 0.213233 | 2_2:+63824850 | None:intergenic |
| GCACTAATCCGAGGGTATTT+TGG | 0.229197 | 2_2:+63824773 | None:intergenic |
| GATCAAGGTGTTAACTTTCT+TGG | 0.259114 | 2_2:+63824583 | None:intergenic |
| CAACCTTACATAGGCCTTCT+TGG | 0.259824 | 2_2:+63824258 | None:intergenic |
| CATATGGTTTAGCCTATAAA+TGG | 0.287603 | 2_2:-63823620 | Msa0264010:three_prime_UTR |
| TCACGCAGATTTCACATCTA+AGG | 0.290602 | 2_2:-63826339 | Msa0264010:five_prime_UTR |
| AGATGGTAATCTTGAGAATT+AGG | 0.291366 | 2_2:+63823864 | None:intergenic |
| AAGATCTGTGCTGTCACATT+TGG | 0.315998 | 2_2:-63823808 | Msa0264010:three_prime_UTR |
| GCTTTCAAGGCCTGTGCCTT+TGG | 0.317092 | 2_2:+63824899 | None:intergenic |
| ATTAATTTCAGTAGTTCTAT+AGG | 0.318193 | 2_2:-63823502 | Msa0264010:three_prime_UTR |
| CTACGTATCATGCTGAATTC+TGG | 0.336270 | 2_2:-63823462 | Msa0264010:three_prime_UTR |
| CTATCCCTAGATAAAGTCTT+TGG | 0.341250 | 2_2:+63824800 | None:intergenic |
| CACTGCTTTCGCAGCTTTCA+AGG | 0.343655 | 2_2:+63824886 | None:intergenic |
| TTACGATGTCCTTGCACATA+TGG | 0.359904 | 2_2:-63823636 | Msa0264010:three_prime_UTR |
| CCTACTTGCTTAGCATTATG+AGG | 0.361512 | 2_2:+63823758 | None:intergenic |
| CAAGATTACCATCTCTTAAG+AGG | 0.384533 | 2_2:-63823855 | Msa0264010:three_prime_UTR |
| ACAGGCCAAAGACTTTATCT+AGG | 0.384705 | 2_2:-63824805 | Msa0264010:CDS |
| ATTGGGATTATTTAAGGTAA+TGG | 0.385537 | 2_2:-63824199 | Msa0264010:exon |
| AACAAGTAGGCAAATGGTCT+GGG | 0.408451 | 2_2:-63823688 | Msa0264010:three_prime_UTR |
| GAACAAGTAGGCAAATGGTC+TGG | 0.411419 | 2_2:-63823689 | Msa0264010:three_prime_UTR |
| GACACCTGATTATGATGCTT+TGG | 0.412386 | 2_2:-63824236 | Msa0264010:CDS |
| GAGAATTAGGTAGATGGCTT+AGG | 0.412782 | 2_2:+63823877 | None:intergenic |
| TTGGATGTTGCAAACAAGAT+TGG | 0.413392 | 2_2:-63824217 | Msa0264010:CDS |
| CCTACTTGTTCAGCATTATG+AGG | 0.414136 | 2_2:+63823701 | None:intergenic |
| AATCTTGAGAATTAGGTAGA+TGG | 0.416006 | 2_2:+63823871 | None:intergenic |
| CACAATAACAAAACACAATC+CGG | 0.420029 | 2_2:+63824088 | None:intergenic |
| AGATCTGTGCTGTCACATTT+GGG | 0.421441 | 2_2:-63823807 | Msa0264010:three_prime_UTR |
| TAGGTAGATGGCTTAGGCTT+AGG | 0.421556 | 2_2:+63823883 | None:intergenic |
| CTTCATCTTCTACGATTCAA+TGG | 0.425878 | 2_2:-63826312 | Msa0264010:exon |
| TGGATGTTGCAAACAAGATT+GGG | 0.427718 | 2_2:-63824216 | Msa0264010:CDS |
| ATAGGCCTTCTTGGTGCCAT+CGG | 0.428001 | 2_2:+63824267 | None:intergenic |
| AGAAGAAGGCAAAGAAGATC+AGG | 0.439428 | 2_2:-63824844 | Msa0264010:CDS |
| TTTGACGCAAAGTTAAATTC+CGG | 0.442084 | 2_2:-63824107 | Msa0264010:three_prime_UTR |
| TTAGGCTTAGGCTGAGTTGA+TGG | 0.447685 | 2_2:+63823901 | None:intergenic |
| CAAGGCCTGTGCCTTTGGAT+CGG | 0.452797 | 2_2:+63824904 | None:intergenic |
| AGGTGTTAACTTTCTTGGCC+TGG | 0.453520 | 2_2:+63824588 | None:intergenic |
| GGATTATTTAAGGTAATGGC+TGG | 0.458048 | 2_2:-63824195 | Msa0264010:exon |
| CACGCAGATTTCACATCTAA+GGG | 0.458062 | 2_2:-63826338 | Msa0264010:five_prime_UTR |
| ACATCCAAAGCATCATAATC+AGG | 0.461568 | 2_2:+63824232 | None:intergenic |
| GCTGCGAAAGCAGTGAAGTC+AGG | 0.467790 | 2_2:-63824878 | Msa0264010:CDS |
| GATGGCTTAGGCTTAGGCTT+AGG | 0.477823 | 2_2:+63823889 | None:intergenic |
| GTAACTGAGGTTGGTGGTCA+AGG | 0.493313 | 2_2:-63823665 | Msa0264010:three_prime_UTR |
| ATGCTGAACAAGTAGGCAAA+TGG | 0.493728 | 2_2:-63823694 | Msa0264010:three_prime_UTR |
| TAGGCCTTCTTGGTGCCATC+GGG | 0.494781 | 2_2:+63824268 | None:intergenic |
| ATGCTAAGCAAGTAGGCAAA+AGG | 0.497527 | 2_2:-63823751 | Msa0264010:three_prime_UTR |
| TAATGATCAAGTTTGTTCCT+TGG | 0.498760 | 2_2:+63824746 | None:intergenic |
| GATTCAATGGCTCCACCAAA+AGG | 0.506159 | 2_2:-63826299 | Msa0264010:intron |
| AGAAAGTTAACACCTTGATC+AGG | 0.514403 | 2_2:-63824580 | Msa0264010:intron |
| GATTGAAGACAACAACACTT+TGG | 0.518542 | 2_2:-63824678 | Msa0264010:CDS |
| CAAAGACTTTATCTAGGGAT+AGG | 0.519733 | 2_2:-63824799 | Msa0264010:CDS |
| GAAGAAAATGTACGACATCC+AGG | 0.525002 | 2_2:-63824606 | Msa0264010:CDS |
| CCTAAAGGCTTACCTGATCA+AGG | 0.532987 | 2_2:+63824568 | None:intergenic |
| TCTGGGGTAACTGAGGTTGG+TGG | 0.536382 | 2_2:-63823671 | Msa0264010:three_prime_UTR |
| GCTGAGCTAGTTTGAAAATG+TGG | 0.543049 | 2_2:-63823589 | Msa0264010:three_prime_UTR |
| CAGGCCCGATGGCACCAAGA+AGG | 0.551305 | 2_2:-63824272 | Msa0264010:CDS |
| TAGCCTATAAATGGAACACT+TGG | 0.552070 | 2_2:-63823611 | Msa0264010:three_prime_UTR |
| GCACCAAGAAGGCCTATGTA+AGG | 0.556146 | 2_2:-63824261 | Msa0264010:CDS |
| TGGTCTGGGGTAACTGAGGT+TGG | 0.557367 | 2_2:-63823674 | Msa0264010:three_prime_UTR |
| GTATGATCAGTAATTTATGT+TGG | 0.560241 | 2_2:-63823533 | Msa0264010:three_prime_UTR |
| AGGCACTGCCATCAAGAAGA+AGG | 0.565573 | 2_2:-63824858 | Msa0264010:CDS |
| CAGGCCAAAGACTTTATCTA+GGG | 0.565675 | 2_2:-63824804 | Msa0264010:CDS |
| GAAGACCGATCCAAAGGCAC+AGG | 0.567558 | 2_2:-63824909 | Msa0264010:CDS |
| ACTGTCTGCTTCCACCACAC+AGG | 0.577415 | 2_2:-63826364 | Msa0264010:five_prime_UTR |
| AACAAAGTCCTCTTAAGAGA+TGG | 0.577741 | 2_2:+63823847 | None:intergenic |
| CCTCATAATGCTAAGCAAGT+AGG | 0.580047 | 2_2:-63823758 | Msa0264010:three_prime_UTR |
| TAGATAAAGTCTTTGGCCTG+TGG | 0.590574 | 2_2:+63824807 | None:intergenic |
| ATGTGCTATGAACATAATTG+AGG | 0.592048 | 2_2:-63823950 | Msa0264010:three_prime_UTR |
| GGACAACTGTTACATTCCAC+AGG | 0.605601 | 2_2:-63824823 | Msa0264010:CDS |
| TGCAAAGAAGACCGATCCAA+AGG | 0.612710 | 2_2:-63824915 | Msa0264010:CDS |
| CCTCATAATGCTGAACAAGT+AGG | 0.614601 | 2_2:-63823701 | Msa0264010:three_prime_UTR |
| CAAAAGGTCTGCGGTAACCA+AGG | 0.622635 | 2_2:-63823735 | Msa0264010:three_prime_UTR |
| TACGTAGTATGACAACATCC+AGG | 0.622710 | 2_2:+63823553 | None:intergenic |
| ATAGGAATCCAAAATACCCT+CGG | 0.629797 | 2_2:-63824781 | Msa0264010:CDS |
| ATCAGGTGTCAACCTTACAT+AGG | 0.633043 | 2_2:+63824249 | None:intergenic |
| TAGGCTAAACCATATGTGCA+AGG | 0.641503 | 2_2:+63823627 | None:intergenic |
| CAAATGGTCTGGGGTAACTG+AGG | 0.649166 | 2_2:-63823678 | Msa0264010:three_prime_UTR |
| ATTGCTGACTCAGTTGTGAG+CGG | 0.651573 | 2_2:+63824707 | None:intergenic |
| TTGGTGTAGCACTAATCCGA+GGG | 0.658734 | 2_2:+63824765 | None:intergenic |
| CTTGGTGTAGCACTAATCCG+AGG | 0.662347 | 2_2:+63824764 | None:intergenic |
| ACGCAGATTTCACATCTAAG+GGG | 0.669567 | 2_2:-63826337 | Msa0264010:five_prime_UTR |
| TCTGCGTGAAACCTGTGTGG+TGG | 0.673550 | 2_2:+63826353 | None:intergenic |
| GCAAGTAGGCAAAAGGTCTG+CGG | 0.678922 | 2_2:-63823744 | Msa0264010:three_prime_UTR |
| ACAAGTAGGCAAATGGTCTG+GGG | 0.680323 | 2_2:-63823687 | Msa0264010:three_prime_UTR |
| GCGTCAAAATGTCTCCACAA+TGG | 0.680459 | 2_2:+63824122 | None:intergenic |
| CAGAATTCAGCATGATACGT+AGG | 0.680471 | 2_2:+63823463 | None:intergenic |
| CTCGGATTAGTGCTACACCA+AGG | 0.713270 | 2_2:-63824763 | Msa0264010:CDS |
| CATTTGGGAGATATATACCA+AGG | 0.716932 | 2_2:-63823792 | Msa0264010:three_prime_UTR |
| AAATCTGCGTGAAACCTGTG+TGG | 0.746608 | 2_2:+63826350 | None:intergenic |
| TGTGTGGTGGAAGCAGACAG+TGG | 0.760336 | 2_2:+63826366 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAATCTCATTTTTATGTTA+TGG | - | chr2_2:63823804-63823823 | Msa0264010:three_prime_UTR | 15.0% |
| !!! | AGTAGAACTTAAAATTTTAT+AGG | - | chr2_2:63823992-63824011 | Msa0264010:three_prime_UTR | 15.0% |
| !!! | TTATTTTGGATTTGTTAAAA+TGG | + | chr2_2:63824175-63824194 | None:intergenic | 15.0% |
| !!! | TTATTTTGGTTTTGTTAAAA+TGG | - | chr2_2:63824417-63824436 | Msa0264010:intron | 15.0% |
| !!! | TAAATATTGGTTTATCTACA+CGG | - | chr2_2:63823689-63823708 | Msa0264010:three_prime_UTR | 20.0% |
| !! | ATATAGCAAAAGATCTAAAT+TGG | + | chr2_2:63823962-63823981 | None:intergenic | 20.0% |
| !! | ATAATAAAGAAATGAGAATG+CGG | + | chr2_2:63824061-63824080 | None:intergenic | 20.0% |
| !!! | GTTTTGATTAAAAAAATTGC+TGG | + | chr2_2:63824216-63824235 | None:intergenic | 20.0% |
| !!! | TTTTGTTGAATAGAAGATTT+AGG | - | chr2_2:63824544-63824563 | Msa0264010:intron | 20.0% |
| !!! | AGCTATTTTGTATACATAAA+AGG | + | chr2_2:63824830-63824849 | None:intergenic | 20.0% |
| !! | CTCATGTTATTATTTACAAT+GGG | + | chr2_2:63825487-63825506 | None:intergenic | 20.0% |
| !! | TCTCATGTTATTATTTACAA+TGG | + | chr2_2:63825488-63825507 | None:intergenic | 20.0% |
| !!! | TTTAGATGTTAGTCTTTTTA+TGG | - | chr2_2:63825679-63825698 | Msa0264010:intron | 20.0% |
| !!! | ATTAATTTCAGTAGTTCTAT+AGG | - | chr2_2:63826328-63826347 | Msa0264010:five_prime_UTR | 20.0% |
| ! | GACTATTGAAAAAGAAAAGA+AGG | + | chr2_2:63823569-63823588 | None:intergenic | 25.0% |
| !!! | GATTATATAGCAATTTTAGC+TGG | + | chr2_2:63823790-63823809 | None:intergenic | 25.0% |
| ! | TAATAAAGAAATGAGAATGC+GGG | + | chr2_2:63824060-63824079 | None:intergenic | 25.0% |
| !!! | GTTTTGATTAAAAAAGTTGC+TGG | - | chr2_2:63824376-63824395 | Msa0264010:intron | 25.0% |
| ! | AATAAGTTGTTTATCCAAAC+AGG | - | chr2_2:63824803-63824822 | Msa0264010:CDS | 25.0% |
| !! | CAAATTTGTTCAGTAATTCA+TGG | - | chr2_2:63825300-63825319 | Msa0264010:intron | 25.0% |
| ! | AAACTGCTTTACAATAATGT+GGG | + | chr2_2:63825517-63825536 | None:intergenic | 25.0% |
| ! | TAAACTGCTTTACAATAATG+TGG | + | chr2_2:63825518-63825537 | None:intergenic | 25.0% |
| ! | AACAAGATTGGGATTATTTA+AGG | - | chr2_2:63825625-63825644 | Msa0264010:intron | 25.0% |
| !! | ATTGGGATTATTTAAGGTAA+TGG | - | chr2_2:63825631-63825650 | Msa0264010:intron | 25.0% |
| ! | ATCTAAACAAAAACTGTCTT+TGG | + | chr2_2:63825666-63825685 | None:intergenic | 25.0% |
| ! | AGTTCGATTGCAATTAAATT+TGG | - | chr2_2:63825771-63825790 | Msa0264010:intron | 25.0% |
| ! | AAATCTAAAAACAAACTTCG+AGG | + | chr2_2:63825836-63825855 | None:intergenic | 25.0% |
| !!! | TCGAAGTTTGTTTTTAGATT+TGG | - | chr2_2:63825835-63825854 | Msa0264010:intron | 25.0% |
| !!! | AAGTTTGTTTTTAGATTTGG+TGG | - | chr2_2:63825838-63825857 | Msa0264010:intron | 25.0% |
| ! | GTATGATCAGTAATTTATGT+TGG | - | chr2_2:63826297-63826316 | Msa0264010:intron | 25.0% |
| ! | ATAGATGAAATACCTTTTGG+TGG | + | chr2_2:63823546-63823565 | None:intergenic | 30.0% |
| ! | AGGATAGATGAAATACCTTT+TGG | + | chr2_2:63823549-63823568 | None:intergenic | 30.0% |
| ATGAAAACAGATGCAGAAAT+TGG | + | chr2_2:63823620-63823639 | None:intergenic | 30.0% | |
| ! | CGAGTTTCTGGATTAAATAT+TGG | - | chr2_2:63823676-63823695 | Msa0264010:three_prime_UTR | 30.0% |
| !! | AATAATCTGTGTTTTTGTGC+CGG | - | chr2_2:63823720-63823739 | Msa0264010:three_prime_UTR | 30.0% |
| !! | GTTGTTTTCAGAAGCAATTT+TGG | + | chr2_2:63823922-63823941 | None:intergenic | 30.0% |
| !!! | TGATTTGCTTGGTCTTATTT+TGG | + | chr2_2:63824189-63824208 | None:intergenic | 30.0% |
| !!! | TGATTTGCTTGGACTTATTT+TGG | - | chr2_2:63824403-63824422 | Msa0264010:intron | 30.0% |
| ATCTCCATGATTATTGCTTT+CGG | - | chr2_2:63824455-63824474 | Msa0264010:intron | 30.0% | |
| !! | TAGAAGATTTAGGACCTTTT+TGG | - | chr2_2:63824554-63824573 | Msa0264010:intron | 30.0% |
| !!! | ATTTGTTTTGTGAGACTGTT+TGG | - | chr2_2:63824605-63824624 | Msa0264010:CDS | 30.0% |
| !!! | TTTGTTTTGTGAGACTGTTT+GGG | - | chr2_2:63824606-63824625 | Msa0264010:CDS | 30.0% |
| TAAGCTATTCTTGTGCAAAT+GGG | + | chr2_2:63824741-63824760 | None:intergenic | 30.0% | |
| ATAAGCTATTCTTGTGCAAA+TGG | + | chr2_2:63824742-63824761 | None:intergenic | 30.0% | |
| TATACATAAAAGGTCCTGTT+TGG | + | chr2_2:63824820-63824839 | None:intergenic | 30.0% | |
| ! | GGTCATCTTTTTCTTTTTGT+AGG | - | chr2_2:63824886-63824905 | Msa0264010:CDS | 30.0% |
| ! | CTTTTTCTTTTTGTAGGTGA+TGG | - | chr2_2:63824892-63824911 | Msa0264010:CDS | 30.0% |
| ! | TAATGATCAAGTTTGTTCCT+TGG | + | chr2_2:63825087-63825106 | None:intergenic | 30.0% |
| AGCTGACAAAAAGAAAATCA+AGG | - | chr2_2:63825194-63825213 | Msa0264010:intron | 30.0% | |
| CAAAAAAGATCACAACCTAA+AGG | + | chr2_2:63825280-63825299 | None:intergenic | 30.0% | |
| GTAATAACATGTACATACAC+TGG | - | chr2_2:63825398-63825417 | Msa0264010:intron | 30.0% | |
| !!! | TGTACATACACTGGTTTTTA+TGG | - | chr2_2:63825407-63825426 | Msa0264010:intron | 30.0% |
| TATCATATCCCTTCACAATA+GGG | + | chr2_2:63825453-63825472 | None:intergenic | 30.0% | |
| TTTGACGCAAAGTTAAATTC+CGG | - | chr2_2:63825723-63825742 | Msa0264010:intron | 30.0% | |
| CACAATAACAAAACACAATC+CGG | + | chr2_2:63825745-63825764 | None:intergenic | 30.0% | |
| ATGTGCTATGAACATAATTG+AGG | - | chr2_2:63825880-63825899 | Msa0264010:intron | 30.0% | |
| AATCTTGAGAATTAGGTAGA+TGG | + | chr2_2:63825962-63825981 | None:intergenic | 30.0% | |
| AGATGGTAATCTTGAGAATT+AGG | + | chr2_2:63825969-63825988 | None:intergenic | 30.0% | |
| CATATGGTTTAGCCTATAAA+TGG | - | chr2_2:63826210-63826229 | Msa0264010:intron | 30.0% | |
| CTTCATCTTCTACGATTCAA+TGG | - | chr2_2:63823518-63823537 | Msa0264010:three_prime_UTR | 35.0% | |
| TCTACTCGAATCAAATCTAC+CGG | + | chr2_2:63823742-63823761 | None:intergenic | 35.0% | |
| !!! | AGCAATTTTAGCTGGCATTA+AGG | + | chr2_2:63823782-63823801 | None:intergenic | 35.0% |
| AACACCGAAAGCAATAATCA+TGG | + | chr2_2:63824462-63824481 | None:intergenic | 35.0% | |
| ! | AATGAAGCATCCAGAGAAAT+GGG | + | chr2_2:63824494-63824513 | None:intergenic | 35.0% |
| ! | AAATGAAGCATCCAGAGAAA+TGG | + | chr2_2:63824495-63824514 | None:intergenic | 35.0% |
| !! | TCTGGATGCTTCATTTTTCT+GGG | - | chr2_2:63824499-63824518 | Msa0264010:intron | 35.0% |
| !! | GATTTAGGACCTTTTTGGAT+TGG | - | chr2_2:63824559-63824578 | Msa0264010:intron | 35.0% |
| TGAAAGAAGCCAATCCAAAA+AGG | + | chr2_2:63824571-63824590 | None:intergenic | 35.0% | |
| CTATCCCTAGATAAAGTCTT+TGG | + | chr2_2:63825033-63825052 | None:intergenic | 35.0% | |
| CAAAGACTTTATCTAGGGAT+AGG | - | chr2_2:63825031-63825050 | Msa0264010:intron | 35.0% | |
| ATAGGAATCCAAAATACCCT+CGG | - | chr2_2:63825049-63825068 | Msa0264010:intron | 35.0% | |
| GATTGAAGACAACAACACTT+TGG | - | chr2_2:63825152-63825171 | Msa0264010:intron | 35.0% | |
| ! | GATGTCGTACATTTTCTTCA+CGG | + | chr2_2:63825223-63825242 | None:intergenic | 35.0% |
| ! | GATCAAGGTGTTAACTTTCT+TGG | + | chr2_2:63825250-63825269 | None:intergenic | 35.0% |
| AGAAAGTTAACACCTTGATC+AGG | - | chr2_2:63825250-63825269 | Msa0264010:intron | 35.0% | |
| GTATCATATCCCTTCACAAT+AGG | + | chr2_2:63825454-63825473 | None:intergenic | 35.0% | |
| ! | AACTTTGCATGTTTTCTTGC+AGG | - | chr2_2:63825539-63825558 | Msa0264010:intron | 35.0% |
| ! | ACATCCAAAGCATCATAATC+AGG | + | chr2_2:63825601-63825620 | None:intergenic | 35.0% |
| TTGGATGTTGCAAACAAGAT+TGG | - | chr2_2:63825613-63825632 | Msa0264010:intron | 35.0% | |
| TGGATGTTGCAAACAAGATT+GGG | - | chr2_2:63825614-63825633 | Msa0264010:intron | 35.0% | |
| ! | GGATTATTTAAGGTAATGGC+TGG | - | chr2_2:63825635-63825654 | Msa0264010:intron | 35.0% |
| ! | TTTTATGGTGATCACCATTG+TGG | - | chr2_2:63825694-63825713 | Msa0264010:intron | 35.0% |
| CAAGATTACCATCTCTTAAG+AGG | - | chr2_2:63825975-63825994 | Msa0264010:intron | 35.0% | |
| AACAAAGTCCTCTTAAGAGA+TGG | + | chr2_2:63825986-63826005 | None:intergenic | 35.0% | |
| CATTTGGGAGATATATACCA+AGG | - | chr2_2:63826038-63826057 | Msa0264010:intron | 35.0% | |
| !! | ATGAGGTGATTGTTTTACCT+TGG | + | chr2_2:63826115-63826134 | None:intergenic | 35.0% |
| TAGCCTATAAATGGAACACT+TGG | - | chr2_2:63826219-63826238 | Msa0264010:intron | 35.0% | |
| !!! | TGTGGTTCTTTTAAAACTCC+TGG | - | chr2_2:63826259-63826278 | Msa0264010:intron | 35.0% |
| TCACGCAGATTTCACATCTA+AGG | - | chr2_2:63823491-63823510 | Msa0264010:three_prime_UTR | 40.0% | |
| CACGCAGATTTCACATCTAA+GGG | - | chr2_2:63823492-63823511 | Msa0264010:three_prime_UTR | 40.0% | |
| ACGCAGATTTCACATCTAAG+GGG | - | chr2_2:63823493-63823512 | Msa0264010:three_prime_UTR | 40.0% | |
| GCGGGTTTAGCAAACAAATA+AGG | + | chr2_2:63824042-63824061 | None:intergenic | 40.0% | |
| GACCTCGAAAGCAATAATCA+TGG | - | chr2_2:63824130-63824149 | Msa0264010:three_prime_UTR | 40.0% | |
| CTCCATGATTATTGCTTTCG+AGG | + | chr2_2:63824457-63824476 | None:intergenic | 40.0% | |
| !! | TTGCTGGAACATGATTTGCT+TGG | + | chr2_2:63824392-63824411 | None:intergenic | 40.0% |
| !! | TTGCTGGAACATGATTTGCT+TGG | - | chr2_2:63824392-63824411 | Msa0264010:intron | 40.0% |
| TTAGAGTCATCCCATTTCTC+TGG | - | chr2_2:63824481-63824500 | Msa0264010:intron | 40.0% | |
| !! | CTCTGGATGCTTCATTTTTC+TGG | - | chr2_2:63824498-63824517 | Msa0264010:intron | 40.0% |
| GCTTCTTTCAGCTTATCTAC+CGG | - | chr2_2:63824581-63824600 | Msa0264010:CDS | 40.0% | |
| CAGTCTCACAAAACAAATGC+CGG | + | chr2_2:63824603-63824622 | None:intergenic | 40.0% | |
| ATGTTTCCACGAGTTACGTT+GGG | + | chr2_2:63824685-63824704 | None:intergenic | 40.0% | |
| TTGCTGCATGAAATGTGACT+AGG | - | chr2_2:63824865-63824884 | Msa0264010:CDS | 40.0% | |
| CTTCTTTGCCTTCTTCTTGA+TGG | + | chr2_2:63824983-63825002 | None:intergenic | 40.0% | |
| AGAAGAAGGCAAAGAAGATC+AGG | - | chr2_2:63824986-63825005 | Msa0264010:intron | 40.0% | |
| TAGATAAAGTCTTTGGCCTG+TGG | + | chr2_2:63825026-63825045 | None:intergenic | 40.0% | |
| ACAGGCCAAAGACTTTATCT+AGG | - | chr2_2:63825025-63825044 | Msa0264010:intron | 40.0% | |
| CAGGCCAAAGACTTTATCTA+GGG | - | chr2_2:63825026-63825045 | Msa0264010:intron | 40.0% | |
| GAAGAAAATGTACGACATCC+AGG | - | chr2_2:63825224-63825243 | Msa0264010:intron | 40.0% | |
| !! | AGACTTGTTGAGTTGAATGC+TGG | - | chr2_2:63825330-63825349 | Msa0264010:intron | 40.0% |
| ATCAGGTGTCAACCTTACAT+AGG | + | chr2_2:63825584-63825603 | None:intergenic | 40.0% | |
| GACACCTGATTATGATGCTT+TGG | - | chr2_2:63825594-63825613 | Msa0264010:intron | 40.0% | |
| GAGAATTAGGTAGATGGCTT+AGG | + | chr2_2:63825956-63825975 | None:intergenic | 40.0% | |
| AAGATCTGTGCTGTCACATT+TGG | - | chr2_2:63826022-63826041 | Msa0264010:intron | 40.0% | |
| AGATCTGTGCTGTCACATTT+GGG | - | chr2_2:63826023-63826042 | Msa0264010:intron | 40.0% | |
| ! | ATGAGGTGATCGTTTTACCT+TGG | + | chr2_2:63826058-63826077 | None:intergenic | 40.0% |
| CCTACTTGCTTAGCATTATG+AGG | + | chr2_2:63826075-63826094 | None:intergenic | 40.0% | |
| CCTCATAATGCTAAGCAAGT+AGG | - | chr2_2:63826072-63826091 | Msa0264010:intron | 40.0% | |
| ATGCTAAGCAAGTAGGCAAA+AGG | - | chr2_2:63826079-63826098 | Msa0264010:intron | 40.0% | |
| CCTACTTGTTCAGCATTATG+AGG | + | chr2_2:63826132-63826151 | None:intergenic | 40.0% | |
| CCTCATAATGCTGAACAAGT+AGG | - | chr2_2:63826129-63826148 | Msa0264010:intron | 40.0% | |
| ATGCTGAACAAGTAGGCAAA+TGG | - | chr2_2:63826136-63826155 | Msa0264010:intron | 40.0% | |
| AACAAGTAGGCAAATGGTCT+GGG | - | chr2_2:63826142-63826161 | Msa0264010:intron | 40.0% | |
| TTACGATGTCCTTGCACATA+TGG | - | chr2_2:63826194-63826213 | Msa0264010:intron | 40.0% | |
| TAGGCTAAACCATATGTGCA+AGG | + | chr2_2:63826206-63826225 | None:intergenic | 40.0% | |
| CAGCCAAGTGTTCCATTTAT+AGG | + | chr2_2:63826225-63826244 | None:intergenic | 40.0% | |
| ! | GCTGAGCTAGTTTGAAAATG+TGG | - | chr2_2:63826241-63826260 | Msa0264010:intron | 40.0% |
| TACGTAGTATGACAACATCC+AGG | + | chr2_2:63826280-63826299 | None:intergenic | 40.0% | |
| CAGAATTCAGCATGATACGT+AGG | + | chr2_2:63826370-63826389 | None:intergenic | 40.0% | |
| CTACGTATCATGCTGAATTC+TGG | - | chr2_2:63826368-63826387 | Msa0264010:five_prime_UTR | 40.0% | |
| AAATCTGCGTGAAACCTGTG+TGG | + | chr2_2:63823483-63823502 | None:intergenic | 45.0% | |
| GATTCAATGGCTCCACCAAA+AGG | - | chr2_2:63823531-63823550 | Msa0264010:three_prime_UTR | 45.0% | |
| TGTTTCCACGAGTTACGTTG+GGG | + | chr2_2:63824684-63824703 | None:intergenic | 45.0% | |
| GATGTTTCCACGAGTTACGT+TGG | + | chr2_2:63824686-63824705 | None:intergenic | 45.0% | |
| TGCAAAGAAGACCGATCCAA+AGG | - | chr2_2:63824915-63824934 | Msa0264010:CDS | 45.0% | |
| GGACAACTGTTACATTCCAC+AGG | - | chr2_2:63825007-63825026 | Msa0264010:intron | 45.0% | |
| !!! | GCACTAATCCGAGGGTATTT+TGG | + | chr2_2:63825060-63825079 | None:intergenic | 45.0% |
| TTGGTGTAGCACTAATCCGA+GGG | + | chr2_2:63825068-63825087 | None:intergenic | 45.0% | |
| !! | ATTGCTGACTCAGTTGTGAG+CGG | + | chr2_2:63825126-63825145 | None:intergenic | 45.0% |
| AGGTGTTAACTTTCTTGGCC+TGG | + | chr2_2:63825245-63825264 | None:intergenic | 45.0% | |
| CCTAAAGGCTTACCTGATCA+AGG | + | chr2_2:63825265-63825284 | None:intergenic | 45.0% | |
| CCTTGATCAGGTAAGCCTTT+AGG | - | chr2_2:63825262-63825281 | Msa0264010:intron | 45.0% | |
| ATGGCACACTGTTATGCTCA+CGG | - | chr2_2:63825426-63825445 | Msa0264010:intron | 45.0% | |
| CAACCTTACATAGGCCTTCT+TGG | + | chr2_2:63825575-63825594 | None:intergenic | 45.0% | |
| GCGTCAAAATGTCTCCACAA+TGG | + | chr2_2:63825711-63825730 | None:intergenic | 45.0% | |
| ! | TTAGGCTTAGGCTGAGTTGA+TGG | + | chr2_2:63825932-63825951 | None:intergenic | 45.0% |
| TAGGTAGATGGCTTAGGCTT+AGG | + | chr2_2:63825950-63825969 | None:intergenic | 45.0% | |
| GAACAAGTAGGCAAATGGTC+TGG | - | chr2_2:63826141-63826160 | Msa0264010:intron | 45.0% | |
| ACAAGTAGGCAAATGGTCTG+GGG | - | chr2_2:63826143-63826162 | Msa0264010:intron | 45.0% | |
| TCACTGCTTGCACGAGTTTC+TGG | - | chr2_2:63823664-63823683 | Msa0264010:three_prime_UTR | 50.0% | |
| GTTTCCACGAGTTACGTTGG+GGG | + | chr2_2:63824683-63824702 | None:intergenic | 50.0% | |
| CACTGCTTTCGCAGCTTTCA+AGG | + | chr2_2:63824947-63824966 | None:intergenic | 50.0% | |
| ! | AGGCACTGCCATCAAGAAGA+AGG | - | chr2_2:63824972-63824991 | Msa0264010:intron | 50.0% |
| ! | CTTGGTGTAGCACTAATCCG+AGG | + | chr2_2:63825069-63825088 | None:intergenic | 50.0% |
| !! | CTCGGATTAGTGCTACACCA+AGG | - | chr2_2:63825067-63825086 | Msa0264010:intron | 50.0% |
| TGGCACACTGTTATGCTCAC+GGG | - | chr2_2:63825427-63825446 | Msa0264010:intron | 50.0% | |
| ! | ATGTTTTCTTGCAGGCCCGA+TGG | - | chr2_2:63825547-63825566 | Msa0264010:intron | 50.0% |
| !! | ATAGGCCTTCTTGGTGCCAT+CGG | + | chr2_2:63825566-63825585 | None:intergenic | 50.0% |
| GCACCAAGAAGGCCTATGTA+AGG | - | chr2_2:63825569-63825588 | Msa0264010:intron | 50.0% | |
| GATGGCTTAGGCTTAGGCTT+AGG | + | chr2_2:63825944-63825963 | None:intergenic | 50.0% | |
| GCAAGTAGGCAAAAGGTCTG+CGG | - | chr2_2:63826086-63826105 | Msa0264010:intron | 50.0% | |
| CAAAAGGTCTGCGGTAACCA+AGG | - | chr2_2:63826095-63826114 | Msa0264010:intron | 50.0% | |
| ! | CAAATGGTCTGGGGTAACTG+AGG | - | chr2_2:63826152-63826171 | Msa0264010:intron | 50.0% |
| !! | GTAACTGAGGTTGGTGGTCA+AGG | - | chr2_2:63826165-63826184 | Msa0264010:intron | 50.0% |
| ! | TGTGTGGTGGAAGCAGACAG+TGG | + | chr2_2:63823467-63823486 | None:intergenic | 55.0% |
| ACTGTCTGCTTCCACCACAC+AGG | - | chr2_2:63823466-63823485 | Msa0264010:three_prime_UTR | 55.0% | |
| TCTGCGTGAAACCTGTGTGG+TGG | + | chr2_2:63823480-63823499 | None:intergenic | 55.0% | |
| AGTTCCCCCAACGTAACTCG+TGG | - | chr2_2:63824676-63824695 | Msa0264010:CDS | 55.0% | |
| ! | GAAGACCGATCCAAAGGCAC+AGG | - | chr2_2:63824921-63824940 | Msa0264010:CDS | 55.0% |
| CAAGGCCTGTGCCTTTGGAT+CGG | + | chr2_2:63824929-63824948 | None:intergenic | 55.0% | |
| GCTTTCAAGGCCTGTGCCTT+TGG | + | chr2_2:63824934-63824953 | None:intergenic | 55.0% | |
| GCTGCGAAAGCAGTGAAGTC+AGG | - | chr2_2:63824952-63824971 | Msa0264010:intron | 55.0% | |
| CTCACGGGCCCTATTGTGAA+GGG | - | chr2_2:63825442-63825461 | Msa0264010:intron | 55.0% | |
| !! | TAGGCCTTCTTGGTGCCATC+GGG | + | chr2_2:63825565-63825584 | None:intergenic | 55.0% |
| ! | TGGTCTGGGGTAACTGAGGT+TGG | - | chr2_2:63826156-63826175 | Msa0264010:intron | 55.0% |
| ! | TCTGGGGTAACTGAGGTTGG+TGG | - | chr2_2:63826159-63826178 | Msa0264010:intron | 55.0% |
| GCTCACGGGCCCTATTGTGA+AGG | - | chr2_2:63825441-63825460 | Msa0264010:intron | 60.0% | |
| CAGGCCCGATGGCACCAAGA+AGG | - | chr2_2:63825558-63825577 | Msa0264010:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 63823460 | 63826392 | 63823460 | ID=Msa0264010;Name=Msa0264010 |
| chr2_2 | mRNA | 63823460 | 63826392 | 63823460 | ID=Msa0264010-mRNA-1;Parent=Msa0264010;Name=Msa0264010-mRNA-1;_AED=0.01;_eAED=0.01;_QI=77|1|1|1|1|1|3|747|154 |
| chr2_2 | exon | 63823460 | 63824291 | 63823460 | ID=Msa0264010-mRNA-1:exon:19865;Parent=Msa0264010-mRNA-1 |
| chr2_2 | exon | 63824581 | 63824944 | 63824581 | ID=Msa0264010-mRNA-1:exon:19864;Parent=Msa0264010-mRNA-1 |
| chr2_2 | exon | 63826300 | 63826392 | 63826300 | ID=Msa0264010-mRNA-1:exon:19863;Parent=Msa0264010-mRNA-1 |
| chr2_2 | five_prime_UTR | 63826316 | 63826392 | 63826316 | ID=Msa0264010-mRNA-1:five_prime_utr;Parent=Msa0264010-mRNA-1 |
| chr2_2 | CDS | 63826300 | 63826315 | 63826300 | ID=Msa0264010-mRNA-1:cds;Parent=Msa0264010-mRNA-1 |
| chr2_2 | CDS | 63824581 | 63824944 | 63824581 | ID=Msa0264010-mRNA-1:cds;Parent=Msa0264010-mRNA-1 |
| chr2_2 | CDS | 63824207 | 63824291 | 63824207 | ID=Msa0264010-mRNA-1:cds;Parent=Msa0264010-mRNA-1 |
| chr2_2 | three_prime_UTR | 63823460 | 63824206 | 63823460 | ID=Msa0264010-mRNA-1:three_prime_utr;Parent=Msa0264010-mRNA-1 |
| Gene Sequence |
| Protein sequence |
