Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1079920 | XP_013450065.1 | 99.387 | 163 | 1 | 0 | 1 | 163 | 1 | 163 | 1.32e-112 | 327 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1079920 | sp|O65743|RL24_CICAR | 95.706 | 163 | 6 | 1 | 1 | 162 | 1 | 163 | 9.90e-110 | 312 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1079920 | I3SKQ8 | 99.387 | 163 | 1 | 0 | 1 | 163 | 1 | 163 | 6.33e-113 | 327 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0044890 | Msa1079920 | 0.806096 | 9.708848e-50 | -8.615850e-47 |
| Msa0068970 | Msa1079920 | 0.817853 | 2.657896e-52 | -8.615850e-47 |
| Msa0087910 | Msa1079920 | 0.862702 | 4.204207e-64 | -8.615850e-47 |
| Msa0114600 | Msa1079920 | 0.838661 | 2.518621e-57 | -8.615850e-47 |
| Msa0606050 | Msa1079920 | 0.802996 | 4.303892e-49 | -8.615850e-47 |
| Msa0608260 | Msa1079920 | 0.824609 | 7.355913e-54 | -8.615850e-47 |
| Msa0646990 | Msa1079920 | 0.816764 | 4.673586e-52 | -8.615850e-47 |
| Msa0691330 | Msa1079920 | 0.832569 | 8.771616e-56 | -8.615850e-47 |
| Msa0749000 | Msa1079920 | 0.821158 | 4.684000e-53 | -8.615850e-47 |
| Msa0796490 | Msa1079920 | 0.833839 | 4.235682e-56 | -8.615850e-47 |
| Msa0122290 | Msa1079920 | 0.805308 | 1.421229e-49 | -8.615850e-47 |
| Msa0134580 | Msa1079920 | 0.811197 | 7.895666e-51 | -8.615850e-47 |
| Msa0183090 | Msa1079920 | 0.804894 | 1.734693e-49 | -8.615850e-47 |
| Msa0184650 | Msa1079920 | 0.900510 | 6.813281e-78 | -8.615850e-47 |
| Msa0194940 | Msa1079920 | 0.816224 | 6.174976e-52 | -8.615850e-47 |
| Msa0210330 | Msa1079920 | 0.836668 | 8.175880e-57 | -8.615850e-47 |
| Msa0222730 | Msa1079920 | 0.821551 | 3.801418e-53 | -8.615850e-47 |
| Msa0223950 | Msa1079920 | 0.821446 | 4.021416e-53 | -8.615850e-47 |
| Msa0426250 | Msa1079920 | 0.841211 | 5.450873e-58 | -8.615850e-47 |
| Msa1040160 | Msa1079920 | 0.803798 | 2.935198e-49 | -8.615850e-47 |
| Msa1078870 | Msa1079920 | 0.801445 | 8.972772e-49 | -8.615850e-47 |
| Msa1078980 | Msa1079920 | 0.805269 | 1.448246e-49 | -8.615850e-47 |
| Msa1079910 | Msa1079920 | 0.895177 | 1.228024e-75 | -8.615850e-47 |
| Msa1079920 | Msa1081340 | 0.806348 | 8.591427e-50 | -8.615850e-47 |
| Msa1079920 | Msa1083370 | 0.801779 | 7.664429e-49 | -8.615850e-47 |
| Msa1079920 | Msa1093500 | 0.800167 | 1.636398e-48 | -8.615850e-47 |
| Msa1079920 | Msa1124850 | 0.919395 | 4.751554e-87 | -8.615850e-47 |
| Msa1079920 | Msa1128120 | 0.903221 | 4.340406e-79 | -8.615850e-47 |
| Msa1079920 | Msa1167540 | 0.896611 | 3.123627e-76 | -8.615850e-47 |
| Msa1079920 | Msa1167550 | 0.841193 | 5.513569e-58 | -8.615850e-47 |
| Msa1079920 | Msa1169180 | 0.817505 | 3.185471e-52 | -8.615850e-47 |
| Msa1079920 | Msa1208330 | 0.831264 | 1.841894e-55 | -8.615850e-47 |
| Msa1079920 | Msa1295150 | 0.836412 | 9.503195e-57 | -8.615850e-47 |
| Msa1079920 | Msa1295170 | 0.859432 | 4.153243e-63 | -8.615850e-47 |
| Msa1079920 | Msa1341780 | 0.811092 | 8.323882e-51 | -8.615850e-47 |
| Msa0250820 | Msa1079920 | 0.855707 | 5.266708e-62 | -8.615850e-47 |
| Msa0250870 | Msa1079920 | 0.848387 | 6.333226e-60 | -8.615850e-47 |
| Msa0264010 | Msa1079920 | 0.833010 | 6.817178e-56 | -8.615850e-47 |
| Msa0341880 | Msa1079920 | 0.804040 | 2.614474e-49 | -8.615850e-47 |
| Msa0342850 | Msa1079920 | 0.895662 | 7.748373e-76 | -8.615850e-47 |
| Msa0486070 | Msa1079920 | 0.810169 | 1.317191e-50 | -8.615850e-47 |
| Msa0529900 | Msa1079920 | 0.823840 | 1.115417e-53 | -8.615850e-47 |
| Msa0544720 | Msa1079920 | 0.833457 | 5.275196e-56 | -8.615850e-47 |
| Msa0554210 | Msa1079920 | 0.824889 | 6.321398e-54 | -8.615850e-47 |
| Msa0557720 | Msa1079920 | 0.823414 | 1.403061e-53 | -8.615850e-47 |
| Msa0848240 | Msa1079920 | 0.819119 | 1.372691e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1079920 | MtrunA17_Chr7g0265501 | 99.387 | 163 | 1 | 0 | 1 | 163 | 1 | 163 | 1.22e-116 | 327 |
| Msa1079920 | MtrunA17_Chr7g0265491 | 99.387 | 163 | 1 | 0 | 1 | 163 | 1 | 163 | 1.22e-116 | 327 |
| Msa1079920 | MtrunA17_Chr1g0179601 | 94.667 | 150 | 7 | 1 | 1 | 149 | 1 | 150 | 1.90e-89 | 258 |
| Msa1079920 | MtrunA17_Chr4g0027111 | 37.895 | 95 | 57 | 1 | 3 | 95 | 1 | 95 | 8.23e-19 | 78.6 |
| Msa1079920 | MtrunA17_Chr4g0058481 | 87.805 | 41 | 4 | 1 | 56 | 96 | 1 | 40 | 9.29e-17 | 69.7 |
| Msa1079920 | MtrunA17_Chr2g0321011 | 35.484 | 93 | 58 | 1 | 3 | 93 | 1 | 93 | 2.43e-15 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1079920 | AT2G36620.1 | 89.172 | 157 | 16 | 1 | 1 | 156 | 1 | 157 | 1.42e-88 | 256 |
| Msa1079920 | AT3G53020.1 | 89.933 | 149 | 14 | 1 | 1 | 149 | 1 | 148 | 7.66e-84 | 244 |
| Msa1079920 | AT2G44860.2 | 37.500 | 128 | 67 | 5 | 3 | 126 | 1 | 119 | 3.35e-18 | 77.0 |
| Msa1079920 | AT2G44860.1 | 37.500 | 128 | 67 | 5 | 3 | 126 | 1 | 119 | 3.35e-18 | 77.0 |
Find 73 sgRNAs with CRISPR-Local
Find 360 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCAAAATCAATTTAATATC+TGG | 0.154677 | 7_2:-79195100 | None:intergenic |
| AGATGCTACCTCGGCTTTCT+TGG | 0.251083 | 7_2:-79194860 | None:intergenic |
| CCTAAAATGGGCGGTGGTGG+TGG | 0.259183 | 7_2:+79194937 | Msa1079920:CDS |
| TATGCCCAAGGGTCCTAAAA+TGG | 0.286938 | 7_2:+79194924 | Msa1079920:CDS |
| ATCTCGAACCTCGGGCTTCT+CGG | 0.307520 | 7_2:-79194501 | None:intergenic |
| CTTGTGCTGCTTTCTGTACA+TGG | 0.329814 | 7_2:-79194144 | None:intergenic |
| CTGATCCTGGTTACAATGTT+TGG | 0.332668 | 7_2:+79198510 | Msa1079920:three_prime_UTR |
| AATCATAATAAAGATGTATT+AGG | 0.340985 | 7_2:+79198572 | Msa1079920:three_prime_UTR |
| TGATAAAACAGTAACATAAA+AGG | 0.351434 | 7_2:-79195049 | None:intergenic |
| TTTACAGCTGCCTCCATGAT+AGG | 0.356329 | 7_2:-79198551 | None:intergenic |
| GGACCTGGAGTATGGCTTCT+TGG | 0.357806 | 7_2:-79194438 | None:intergenic |
| GCAGTCCATGTGAGCTTTGA+AGG | 0.357906 | 7_2:-79194122 | None:intergenic |
| CTGCCTCCATGATAGGGAAT+AGG | 0.360134 | 7_2:-79198544 | None:intergenic |
| GAAAGCCGAGGTAGCATCTA+AGG | 0.361381 | 7_2:+79194864 | Msa1079920:CDS |
| CTCAAGAAGCGGTGAAGAAA+AGG | 0.395866 | 7_2:+79194405 | Msa1079920:CDS |
| ATAAATCTGATCCCTCTTCC+TGG | 0.395884 | 7_2:-79193891 | None:intergenic |
| GCATCTAAGGCACAAAAGTC+AGG | 0.405098 | 7_2:+79194877 | Msa1079920:CDS |
| CCAACAATGGACCTGGAGTA+TGG | 0.414209 | 7_2:-79194446 | None:intergenic |
| ATCAAGCAAACAAAATATAT+CGG | 0.421334 | 7_2:-79195023 | None:intergenic |
| ATTTATTCGTAGTGATTCTC+AGG | 0.428494 | 7_2:+79193908 | Msa1079920:CDS |
| GCAAAATCAATTTAATATCT+GGG | 0.429649 | 7_2:-79195099 | None:intergenic |
| AAGTGCCAAGCTAGGACTTT+AGG | 0.435076 | 7_2:-79198484 | None:intergenic |
| CCTAGCAGCATCTCGAACCT+CGG | 0.438375 | 7_2:-79194510 | None:intergenic |
| TGCCTCCATGATAGGGAATA+GGG | 0.443848 | 7_2:-79198543 | None:intergenic |
| GGTCCTAAAATGGGCGGTGG+TGG | 0.445895 | 7_2:+79194934 | Msa1079920:CDS |
| ATGTTCCCTATTCCCTATCA+TGG | 0.455556 | 7_2:+79198538 | Msa1079920:three_prime_UTR |
| TTGTGAACTCAAAATGTAAG+AGG | 0.457107 | 7_2:+79194078 | Msa1079920:CDS |
| TCAAAGATTTACCCAGGAAG+AGG | 0.465260 | 7_2:+79193879 | Msa1079920:CDS |
| TTGAAGGCTTCAACTTGTTG+TGG | 0.467148 | 7_2:-79194106 | None:intergenic |
| ATGCCCAAGGGTCCTAAAAT+GGG | 0.479062 | 7_2:+79194925 | Msa1079920:CDS |
| TGTGGCCTAAAGTCCTAGCT+TGG | 0.480427 | 7_2:+79198479 | Msa1079920:three_prime_UTR |
| CTGCTAGGGAAGCTGCTCTT+CGG | 0.488937 | 7_2:+79194525 | Msa1079920:CDS |
| AAACTAATATCAAAAGCTCT+TGG | 0.496634 | 7_2:-79193219 | None:intergenic |
| CCATACTCCAGGTCCATTGT+TGG | 0.499932 | 7_2:+79194446 | Msa1079920:CDS |
| TCAATCCTGCAGTGAAATCA+AGG | 0.504323 | 7_2:+79194804 | Msa1079920:intron |
| CTAGCAGCATCTCGAACCTC+GGG | 0.515819 | 7_2:-79194509 | None:intergenic |
| CTAAAATGGGCGGTGGTGGT+GGG | 0.525722 | 7_2:+79194938 | Msa1079920:CDS |
| CCGAGGTTCGAGATGCTGCT+AGG | 0.531808 | 7_2:+79194510 | Msa1079920:CDS |
| TTACAGCTGCCTCCATGATA+GGG | 0.537899 | 7_2:-79198550 | None:intergenic |
| CGAGGTTCGAGATGCTGCTA+GGG | 0.538000 | 7_2:+79194511 | Msa1079920:CDS |
| CCTGGAGTATGGCTTCTTGG+TGG | 0.554085 | 7_2:-79194435 | None:intergenic |
| TAAATCTGATCCCTCTTCCT+GGG | 0.554260 | 7_2:-79193890 | None:intergenic |
| TGAAGCCTTCAAAGCTCACA+TGG | 0.563280 | 7_2:+79194117 | Msa1079920:CDS |
| CCACATCAACGAAGCAGCCA+TGG | 0.569926 | 7_2:+79193271 | Msa1079920:exon |
| TTGTGCCTTAGATGCTACCT+CGG | 0.575585 | 7_2:-79194869 | None:intergenic |
| CCATGGCTGCTTCGTTGATG+TGG | 0.576982 | 7_2:-79193271 | None:intergenic |
| AGGGAAGGGAAATGTTCAGA+AGG | 0.577296 | 7_2:+79194897 | Msa1079920:CDS |
| TTCAAGTGTAGCACCAACAA+TGG | 0.581573 | 7_2:-79194459 | None:intergenic |
| AAGGGTCCTAAAATGGGCGG+TGG | 0.584819 | 7_2:+79194931 | Msa1079920:CDS |
| TCAGAAGGGTGCTATGCCCA+AGG | 0.589737 | 7_2:+79194912 | Msa1079920:CDS |
| TAAGGCACAAAAGTCAGGGA+AGG | 0.594983 | 7_2:+79194882 | Msa1079920:CDS |
| CAAAGATTTACCCAGGAAGA+GGG | 0.595056 | 7_2:+79193880 | Msa1079920:CDS |
| ACTGAACTCTGTCGATTCAG+TGG | 0.599671 | 7_2:+79193855 | Msa1079920:CDS |
| CCACCAAGAAGCCATACTCC+AGG | 0.600767 | 7_2:+79194435 | Msa1079920:CDS |
| TGGCTGCTTCGTTGATGTGG+TGG | 0.600894 | 7_2:-79193268 | None:intergenic |
| CAGAAGGGTGCTATGCCCAA+GGG | 0.602938 | 7_2:+79194913 | Msa1079920:CDS |
| TAAAACTTACTTTAGAACCA+TGG | 0.603222 | 7_2:-79193288 | None:intergenic |
| AGTATGGCTTCTTGGTGGCA+CGG | 0.604625 | 7_2:-79194430 | None:intergenic |
| CATCTAAGGCACAAAAGTCA+GGG | 0.612277 | 7_2:+79194878 | Msa1079920:CDS |
| TGTAGCACCAACAATGGACC+TGG | 0.616016 | 7_2:-79194453 | None:intergenic |
| ATCAGCGTAAGTGCCAAGCT+AGG | 0.620576 | 7_2:-79198492 | None:intergenic |
| AAGGCACAAAAGTCAGGGAA+GGG | 0.622311 | 7_2:+79194883 | Msa1079920:CDS |
| AGTGGCTCAAAGATTTACCC+AGG | 0.630927 | 7_2:+79193873 | Msa1079920:CDS |
| ATTTGCCAAACATTGTAACC+AGG | 0.635652 | 7_2:-79198515 | None:intergenic |
| GAAAAGAACCGAGAAGCCCG+AGG | 0.642434 | 7_2:+79194493 | Msa1079920:CDS |
| GCAGGACATTGCTCAAGAAG+CGG | 0.647206 | 7_2:+79194394 | Msa1079920:intron |
| GTACAGAAAGCAGCACAAGA+AGG | 0.650232 | 7_2:+79194148 | Msa1079920:CDS |
| CCCAAGGGTCCTAAAATGGG+CGG | 0.653433 | 7_2:+79194928 | Msa1079920:CDS |
| GGGAAGGGAAATGTTCAGAA+GGG | 0.653491 | 7_2:+79194898 | Msa1079920:CDS |
| AAAGAAAGCCAAGAAAGCCG+AGG | 0.666450 | 7_2:+79194852 | Msa1079920:CDS |
| GGAGAGGATAAAGAAAACCA+AGG | 0.682479 | 7_2:+79194825 | Msa1079920:CDS |
| CCTGCAGTGAAATCAAGGAG+AGG | 0.683831 | 7_2:+79194809 | Msa1079920:intron |
| TTCCCTATTCCCTATCATGG+AGG | 0.714859 | 7_2:+79198541 | Msa1079920:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTCTTTTTTCTTTTTTT+CGG | + | chr7_2:79194593-79194612 | Msa1079920:intron | 10.0% |
| !!! | TAAAATCAATTTTTATTGAA+TGG | + | chr7_2:79195350-79195369 | Msa1079920:intron | 10.0% |
| !! | TAGATTTAACAATAAATTTA+AGG | - | chr7_2:79196850-79196869 | None:intergenic | 10.0% |
| !!! | AATGTGTTTTAATATATAAA+GGG | - | chr7_2:79197897-79197916 | None:intergenic | 10.0% |
| !!! | AAATGTGTTTTAATATATAA+AGG | - | chr7_2:79197898-79197917 | None:intergenic | 10.0% |
| !!! | TTAATGTCTAAAAATTTGTT+TGG | + | chr7_2:79193441-79193460 | Msa1079920:intron | 15.0% |
| !! | CTAAAAATTGAAATTACAAT+AGG | - | chr7_2:79193625-79193644 | None:intergenic | 15.0% |
| !!! | ATCTTAGTTTTATTGATATA+AGG | + | chr7_2:79194020-79194039 | Msa1079920:intron | 15.0% |
| !!! | GTTTTTTTTATTGTTTTTAC+AGG | + | chr7_2:79194046-79194065 | Msa1079920:intron | 15.0% |
| !! | AAAAGAAAAAAAAAAAAGAG+AGG | - | chr7_2:79194583-79194602 | None:intergenic | 15.0% |
| !!! | GAAAACAAACTATATTTTAA+TGG | - | chr7_2:79194992-79195011 | None:intergenic | 15.0% |
| !! | CTAAGGTTAAAAATATTATT+TGG | + | chr7_2:79197356-79197375 | Msa1079920:intron | 15.0% |
| !!! | AAAAGAAAATTAAGTTTTGT+TGG | + | chr7_2:79197604-79197623 | Msa1079920:intron | 15.0% |
| !! | TAAAATTATAAGGGTAAAAA+TGG | - | chr7_2:79197857-79197876 | None:intergenic | 15.0% |
| !!! | GGTTTTAACTAAAATTATAA+GGG | - | chr7_2:79197866-79197885 | None:intergenic | 15.0% |
| !! | AAAATTCAAGTATAAAATAG+AGG | - | chr7_2:79198026-79198045 | None:intergenic | 15.0% |
| !! | TTAAAGTATAAAAATGGAAA+TGG | + | chr7_2:79198048-79198067 | Msa1079920:intron | 15.0% |
| !! | AAATGTAAAATGACATAAAA+GGG | - | chr7_2:79198199-79198218 | None:intergenic | 15.0% |
| !! | TAAATGTAAAATGACATAAA+AGG | - | chr7_2:79198200-79198219 | None:intergenic | 15.0% |
| !! | GACTTAAAAAATGTTTAATT+TGG | - | chr7_2:79198440-79198459 | None:intergenic | 15.0% |
| !! | AATCATAATAAAGATGTATT+AGG | + | chr7_2:79198572-79198591 | Msa1079920:three_prime_UTR | 15.0% |
| !!! | AGCTTTTGATATTAGTTTTT+AGG | + | chr7_2:79193224-79193243 | Msa1079920:five_prime_UTR | 20.0% |
| !!! | GCTTTTGATATTAGTTTTTA+GGG | + | chr7_2:79193225-79193244 | Msa1079920:five_prime_UTR | 20.0% |
| !! | AAAATTGAATGTGTAAATGA+TGG | - | chr7_2:79193329-79193348 | None:intergenic | 20.0% |
| !!! | TCATTTACACATTCAATTTT+AGG | + | chr7_2:79193329-79193348 | Msa1079920:intron | 20.0% |
| !!! | CATTTACACATTCAATTTTA+GGG | + | chr7_2:79193330-79193349 | Msa1079920:intron | 20.0% |
| !! | AAATCAACCAAAAATATGAT+GGG | - | chr7_2:79193539-79193558 | None:intergenic | 20.0% |
| !! | TAAATCAACCAAAAATATGA+TGG | - | chr7_2:79193540-79193559 | None:intergenic | 20.0% |
| !!! | TTGAAAATTAGACATGTTTT+TGG | + | chr7_2:79193591-79193610 | Msa1079920:intron | 20.0% |
| !!! | TAATTTCAATTTTTAGTGAG+TGG | + | chr7_2:79193629-79193648 | Msa1079920:intron | 20.0% |
| !!! | ATTTTAATGGTAACCAAAAA+TGG | - | chr7_2:79194979-79194998 | None:intergenic | 20.0% |
| !! | ATCAAGCAAACAAAATATAT+CGG | - | chr7_2:79195026-79195045 | None:intergenic | 20.0% |
| !! | TGATAAAACAGTAACATAAA+AGG | - | chr7_2:79195052-79195071 | None:intergenic | 20.0% |
| !!! | TGTTTTATCAAACTTATGTT+TGG | + | chr7_2:79195062-79195081 | Msa1079920:three_prime_UTR | 20.0% |
| !! | GCAAAATCAATTTAATATCT+GGG | - | chr7_2:79195102-79195121 | None:intergenic | 20.0% |
| !! | AGCAAAATCAATTTAATATC+TGG | - | chr7_2:79195103-79195122 | None:intergenic | 20.0% |
| !!! | TGTTTGATTATAAGTTTTAC+TGG | + | chr7_2:79195180-79195199 | Msa1079920:intron | 20.0% |
| !! | TATCATTATCTATTTAGAAG+AGG | + | chr7_2:79195873-79195892 | Msa1079920:intron | 20.0% |
| !! | GATTAAACTATGTAACATTA+CGG | + | chr7_2:79195919-79195938 | Msa1079920:intron | 20.0% |
| !! | TTAATTCTAGTGAGAAAAAT+TGG | + | chr7_2:79196034-79196053 | Msa1079920:intron | 20.0% |
| !! | TATATAAACACTTACTAGTT+GGG | - | chr7_2:79196133-79196152 | None:intergenic | 20.0% |
| !! | TTATATAAACACTTACTAGT+TGG | - | chr7_2:79196134-79196153 | None:intergenic | 20.0% |
| !! | AACTAGTAAGTGTTTATATA+AGG | + | chr7_2:79196133-79196152 | Msa1079920:intron | 20.0% |
| !! | ACTAGTAAGTGTTTATATAA+GGG | + | chr7_2:79196134-79196153 | Msa1079920:intron | 20.0% |
| !! | GTTTCTTAATTGTAAATATC+CGG | - | chr7_2:79196325-79196344 | None:intergenic | 20.0% |
| !! | TTTACTCAAAAAATAAGACT+TGG | + | chr7_2:79197143-79197162 | Msa1079920:intron | 20.0% |
| !! | CTTACAATAGAAAAATTACA+CGG | + | chr7_2:79197562-79197581 | Msa1079920:intron | 20.0% |
| !!! | GGGTTTTAACTAAAATTATA+AGG | - | chr7_2:79197867-79197886 | None:intergenic | 20.0% |
| !! | AATATATAAAGGGTAAAAGT+GGG | - | chr7_2:79197887-79197906 | None:intergenic | 20.0% |
| !! | TAATATATAAAGGGTAAAAG+TGG | - | chr7_2:79197888-79197907 | None:intergenic | 20.0% |
| !!! | GATAAACTAATTAAAGTGTT+TGG | - | chr7_2:79198248-79198267 | None:intergenic | 20.0% |
| !! | CTTCAAAAATTAACAATTGA+TGG | + | chr7_2:79198611-79198630 | Msa1079920:three_prime_UTR | 20.0% |
| !!! | TAAAACTTACTTTAGAACCA+TGG | - | chr7_2:79193291-79193310 | None:intergenic | 25.0% |
| ! | CATATCTAATGTACTTCTAA+TGG | - | chr7_2:79193690-79193709 | None:intergenic | 25.0% |
| !!! | TGTGTAACTTTTAAGAATGT+TGG | + | chr7_2:79193711-79193730 | Msa1079920:intron | 25.0% |
| !! | TTACTAACTTTTCCAAACAA+GGG | - | chr7_2:79193816-79193835 | None:intergenic | 25.0% |
| !! | ATTACTAACTTTTCCAAACA+AGG | - | chr7_2:79193817-79193836 | None:intergenic | 25.0% |
| ! | GAGATAAAAATGATTCATGT+TGG | + | chr7_2:79193932-79193951 | Msa1079920:intron | 25.0% |
| !! | AAATGATTCATGTTGGATTT+TGG | + | chr7_2:79193939-79193958 | Msa1079920:intron | 25.0% |
| ! | ACAGTAAGTAGTAAAATTAC+TGG | - | chr7_2:79194342-79194361 | None:intergenic | 25.0% |
| !! | TTCATTGAGAACTCTTTTTA+TGG | + | chr7_2:79194649-79194668 | Msa1079920:intron | 25.0% |
| ! | AAAACAGTGATGAAATTACA+TGG | - | chr7_2:79194713-79194732 | None:intergenic | 25.0% |
| !!! | GTAATTTCATCACTGTTTTT+TGG | + | chr7_2:79194714-79194733 | Msa1079920:intron | 25.0% |
| !!! | AAATTGATTTTAAGACATCC+AGG | - | chr7_2:79195342-79195361 | None:intergenic | 25.0% |
| ! | GATTGTTTAATAGCAAATCA+TGG | + | chr7_2:79195372-79195391 | Msa1079920:intron | 25.0% |
| !! | AATTTTTGTAAGTTACAACC+TGG | + | chr7_2:79195532-79195551 | Msa1079920:intron | 25.0% |
| !! | CAATATGCTGTGAATTTTAA+AGG | + | chr7_2:79195675-79195694 | Msa1079920:intron | 25.0% |
| !!! | AGGGTTTGCTTTTAATTATA+TGG | - | chr7_2:79195705-79195724 | None:intergenic | 25.0% |
| ! | CCTTTATATCATTCAAACAT+GGG | - | chr7_2:79195977-79195996 | None:intergenic | 25.0% |
| ! | TCCTTTATATCATTCAAACA+TGG | - | chr7_2:79195978-79195997 | None:intergenic | 25.0% |
| ! | ATATAAACACTTACTAGTTG+GGG | - | chr7_2:79196132-79196151 | None:intergenic | 25.0% |
| ! | AGGTTAAAATCAATTGTAGA+AGG | - | chr7_2:79196830-79196849 | None:intergenic | 25.0% |
| !!! | AGAATTGATTTTGACATGTT+TGG | + | chr7_2:79196955-79196974 | Msa1079920:intron | 25.0% |
| !! | ATTTGGCTATTTGCAATTTT+TGG | - | chr7_2:79197186-79197205 | None:intergenic | 25.0% |
| ! | GAATCTCAAAATTCTATCTA+AGG | + | chr7_2:79197339-79197358 | Msa1079920:intron | 25.0% |
| ! | CACATAACACATAGTTTAAA+GGG | - | chr7_2:79197441-79197460 | None:intergenic | 25.0% |
| ! | ATGTAAATTATTCTCTTCGT+TGG | - | chr7_2:79197467-79197486 | None:intergenic | 25.0% |
| !!! | AAAAGCTAAAAGCTCTTTTT+TGG | - | chr7_2:79197676-79197695 | None:intergenic | 25.0% |
| ! | AACAAAAAAAATAGAGGAAC+TGG | - | chr7_2:79197967-79197986 | None:intergenic | 25.0% |
| ! | AGTAGGAACAAAAAAAATAG+AGG | - | chr7_2:79197973-79197992 | None:intergenic | 25.0% |
| !! | AAAGTGTTTGGTAAAATTAG+AGG | - | chr7_2:79198236-79198255 | None:intergenic | 25.0% |
| !!! | TTTTTAGCACAAAAGTTTTG+TGG | + | chr7_2:79198461-79198480 | Msa1079920:three_prime_UTR | 25.0% |
| ! | TCAAGTACCCATCATATTTT+TGG | + | chr7_2:79193529-79193548 | Msa1079920:intron | 30.0% |
| CAAAATGCAATAACAGTGAA+TGG | - | chr7_2:79193758-79193777 | None:intergenic | 30.0% | |
| !!! | TTGCATTTTGATTGAACTAG+TGG | + | chr7_2:79193768-79193787 | Msa1079920:intron | 30.0% |
| !!! | TGCATTTTGATTGAACTAGT+GGG | + | chr7_2:79193769-79193788 | Msa1079920:intron | 30.0% |
| ATTTATTCGTAGTGATTCTC+AGG | + | chr7_2:79193908-79193927 | Msa1079920:CDS | 30.0% | |
| !!! | TACATTTTGAGTTCACAAAG+AGG | - | chr7_2:79194076-79194095 | None:intergenic | 30.0% |
| TTGTGAACTCAAAATGTAAG+AGG | + | chr7_2:79194078-79194097 | Msa1079920:CDS | 30.0% | |
| CATGTTCAGAAGCTTAATTT+AGG | - | chr7_2:79194232-79194251 | None:intergenic | 30.0% | |
| CAAGGCTATCTAATAGAATT+AGG | - | chr7_2:79194318-79194337 | None:intergenic | 30.0% | |
| AGTAGTAAAATTACTGGACA+AGG | - | chr7_2:79194336-79194355 | None:intergenic | 30.0% | |
| AATTGTGTAACAGGAAAAAC+AGG | - | chr7_2:79194758-79194777 | None:intergenic | 30.0% | |
| GTCATCAATAATTGTGTAAC+AGG | - | chr7_2:79194767-79194786 | None:intergenic | 30.0% | |
| ! | GCGTTAAGTTTTTCCATTTT+TGG | + | chr7_2:79194963-79194982 | Msa1079920:exon | 30.0% |
| !!! | AGAATATGTTGTTTTAAGCC+TGG | + | chr7_2:79195321-79195340 | Msa1079920:intron | 30.0% |
| AACCTAAGTTAACAAACACT+CGG | - | chr7_2:79195442-79195461 | None:intergenic | 30.0% | |
| !! | TTAGGTTGAAAAAAGTTGTG+CGG | + | chr7_2:79195455-79195474 | Msa1079920:intron | 30.0% |
| !! | GGAATGAACAATTTTGAAAG+AGG | + | chr7_2:79195504-79195523 | Msa1079920:intron | 30.0% |
| GGATAATGTAATCCATTAGT+TGG | - | chr7_2:79195584-79195603 | None:intergenic | 30.0% | |
| !! | AGCATATTGACTTAGAAGTT+GGG | - | chr7_2:79195664-79195683 | None:intergenic | 30.0% |
| ATAACAAACGTTGAGATGAA+AGG | + | chr7_2:79195823-79195842 | Msa1079920:intron | 30.0% | |
| TAACAAACGTTGAGATGAAA+GGG | + | chr7_2:79195824-79195843 | Msa1079920:intron | 30.0% | |
| CATTATCTATTTAGAAGAGG+AGG | + | chr7_2:79195876-79195895 | Msa1079920:intron | 30.0% | |
| ACATAGTTTAATCCCATGTA+TGG | - | chr7_2:79195912-79195931 | None:intergenic | 30.0% | |
| TAAACTATGTAACATTACGG+AGG | + | chr7_2:79195922-79195941 | Msa1079920:intron | 30.0% | |
| CCCATGTTTGAATGATATAA+AGG | + | chr7_2:79195974-79195993 | Msa1079920:intron | 30.0% | |
| AGTAAGTGTTTATATAAGGG+TGG | + | chr7_2:79196137-79196156 | Msa1079920:intron | 30.0% | |
| GTAAGTGTTTATATAAGGGT+GGG | + | chr7_2:79196138-79196157 | Msa1079920:intron | 30.0% | |
| TAAGTGTTTATATAAGGGTG+GGG | + | chr7_2:79196139-79196158 | Msa1079920:intron | 30.0% | |
| ACGATTTATTAAAATCGCAC+AGG | - | chr7_2:79196477-79196496 | None:intergenic | 30.0% | |
| TTATACCGAACGAAATTACT+GGG | - | chr7_2:79196753-79196772 | None:intergenic | 30.0% | |
| ATTATACCGAACGAAATTAC+TGG | - | chr7_2:79196754-79196773 | None:intergenic | 30.0% | |
| ! | AAAGTAAAGTGGTTTGTGTT+TGG | - | chr7_2:79196890-79196909 | None:intergenic | 30.0% |
| AAATAAGACTTGGAATCTCA+AGG | + | chr7_2:79197153-79197172 | Msa1079920:intron | 30.0% | |
| AATAAGACTTGGAATCTCAA+GGG | + | chr7_2:79197154-79197173 | Msa1079920:intron | 30.0% | |
| ! | CATCTAAAACTAAAGTGGAT+AGG | - | chr7_2:79197212-79197231 | None:intergenic | 30.0% |
| ! | GTTGTCATCTAAAACTAAAG+TGG | - | chr7_2:79197217-79197236 | None:intergenic | 30.0% |
| GGTATATTCTCTATGTCTTT+CGG | - | chr7_2:79197239-79197258 | None:intergenic | 30.0% | |
| ! | AAGAGTGATATGCACTTTTA+AGG | - | chr7_2:79197260-79197279 | None:intergenic | 30.0% |
| ACATCTCATTTCAAAGTGAA+TGG | + | chr7_2:79197298-79197317 | Msa1079920:intron | 30.0% | |
| ATGGACAATGATATCTGATT+TGG | + | chr7_2:79197317-79197336 | Msa1079920:intron | 30.0% | |
| CCACATAACACATAGTTTAA+AGG | - | chr7_2:79197442-79197461 | None:intergenic | 30.0% | |
| CCTTTAAACTATGTGTTATG+TGG | + | chr7_2:79197439-79197458 | Msa1079920:intron | 30.0% | |
| ! | TTAGGTCTTTAAACTTTTCC+CGG | - | chr7_2:79197525-79197544 | None:intergenic | 30.0% |
| TTGTAAGAAACCTCAATAGT+TGG | - | chr7_2:79197549-79197568 | None:intergenic | 30.0% | |
| ! | TGACAAAAAATAGCTCTGTT+TGG | + | chr7_2:79197719-79197738 | Msa1079920:intron | 30.0% |
| GTAGGAACAAGAAAAAATAG+AGG | - | chr7_2:79197941-79197960 | None:intergenic | 30.0% | |
| GATTCATCAACTAAACCCTA+CGG | - | chr7_2:79193388-79193407 | None:intergenic | 35.0% | |
| !!! | TAGTGAGTGGCTTTTGAAAT+CGG | + | chr7_2:79193642-79193661 | Msa1079920:intron | 35.0% |
| GAATTTATTGCACCCTTGTT+TGG | + | chr7_2:79193801-79193820 | Msa1079920:intron | 35.0% | |
| AATGTAACTAGGTTCATGGA+TGG | - | chr7_2:79194269-79194288 | None:intergenic | 35.0% | |
| CAACAATGTAACTAGGTTCA+TGG | - | chr7_2:79194273-79194292 | None:intergenic | 35.0% | |
| TGAACCTAGTTACATTGTTG+TGG | + | chr7_2:79194273-79194292 | Msa1079920:intron | 35.0% | |
| GTAACCACAACAATGTAACT+AGG | - | chr7_2:79194280-79194299 | None:intergenic | 35.0% | |
| !! | CTTTCTATTATGCTGACTCT+GGG | + | chr7_2:79194556-79194575 | Msa1079920:intron | 35.0% |
| ! | AAGTTTTACTGGTCAGTACT+TGG | + | chr7_2:79195191-79195210 | Msa1079920:intron | 35.0% |
| TTCAACTTTCCTACTAATCC+TGG | + | chr7_2:79195285-79195304 | Msa1079920:intron | 35.0% | |
| ! | TTGAAAGAACCAGGATTAGT+AGG | - | chr7_2:79195297-79195316 | None:intergenic | 35.0% |
| ATTCTGAACTTGAAAGAACC+AGG | - | chr7_2:79195306-79195325 | None:intergenic | 35.0% | |
| ! | TAGGTTGAAAAAAGTTGTGC+GGG | + | chr7_2:79195456-79195475 | Msa1079920:intron | 35.0% |
| TGTAATCCATTAGTTGGACT+TGG | - | chr7_2:79195578-79195597 | None:intergenic | 35.0% | |
| ! | TTGAATGCGTTTTCGAACTT+AGG | - | chr7_2:79195616-79195635 | None:intergenic | 35.0% |
| !! | CAGCATATTGACTTAGAAGT+TGG | - | chr7_2:79195665-79195684 | None:intergenic | 35.0% |
| ATTAAAAGCAAACCCTGCAT+TGG | + | chr7_2:79195709-79195728 | Msa1079920:intron | 35.0% | |
| TTAAAAGCAAACCCTGCATT+GGG | + | chr7_2:79195710-79195729 | Msa1079920:intron | 35.0% | |
| ATTAAAAGCAAACCCTGCAT+TGG | + | chr7_2:79195709-79195728 | Msa1079920:intron | 35.0% | |
| TTAAAAGCAAACCCTGCATT+GGG | + | chr7_2:79195710-79195729 | Msa1079920:intron | 35.0% | |
| !!! | GCTTTTGATAGTGATTCTGT+TGG | + | chr7_2:79196003-79196022 | Msa1079920:intron | 35.0% |
| ACTATGAGAAACTAGTGTGT+GGG | + | chr7_2:79196071-79196090 | Msa1079920:intron | 35.0% | |
| GACTTAAAAATGTCCCACAT+TGG | + | chr7_2:79196099-79196118 | Msa1079920:intron | 35.0% | |
| TGTAAATATCCGGAAGTTTC+TGG | - | chr7_2:79196315-79196334 | None:intergenic | 35.0% | |
| AAACAAAACGCGTTTGCTTA+AGG | + | chr7_2:79196341-79196360 | Msa1079920:intron | 35.0% | |
| TTACGAACTCTGCCTATAAA+AGG | + | chr7_2:79196402-79196421 | Msa1079920:intron | 35.0% | |
| !! | TTTTGGTGTGAAGAATGAGT+GGG | - | chr7_2:79196437-79196456 | None:intergenic | 35.0% |
| !! | ATTTTGGTGTGAAGAATGAG+TGG | - | chr7_2:79196438-79196457 | None:intergenic | 35.0% |
| ! | AAGCATCAACTGTGAGATTT+TGG | - | chr7_2:79196454-79196473 | None:intergenic | 35.0% |
| AACGATTGAACCATACTTTG+AGG | + | chr7_2:79196573-79196592 | Msa1079920:intron | 35.0% | |
| GAGAATTACACCTCAAAGTA+TGG | - | chr7_2:79196586-79196605 | None:intergenic | 35.0% | |
| ATATACTCGTAACAGTGATC+TGG | + | chr7_2:79196628-79196647 | Msa1079920:intron | 35.0% | |
| TATACTCGTAACAGTGATCT+GGG | + | chr7_2:79196629-79196648 | Msa1079920:intron | 35.0% | |
| GAACAGATTCTACTTGAAGT+TGG | + | chr7_2:79196789-79196808 | Msa1079920:intron | 35.0% | |
| GAGTTGAGTGTAAAGTAAAG+TGG | - | chr7_2:79196901-79196920 | None:intergenic | 35.0% | |
| TCTGACAGAAAGTGATTGAA+AGG | - | chr7_2:79197117-79197136 | None:intergenic | 35.0% | |
| ATAAGACTTGGAATCTCAAG+GGG | + | chr7_2:79197155-79197174 | Msa1079920:intron | 35.0% | |
| !! | CTAAAGTGGATAGGAGTATT+TGG | - | chr7_2:79197203-79197222 | None:intergenic | 35.0% |
| AAGACCTAAACCAACTATTG+AGG | + | chr7_2:79197536-79197555 | Msa1079920:intron | 35.0% | |
| ! | GAAACCTCAATAGTTGGTTT+AGG | - | chr7_2:79197543-79197562 | None:intergenic | 35.0% |
| ! | TATCCTTTTTGACCAAGGTT+TGG | - | chr7_2:79197632-79197651 | None:intergenic | 35.0% |
| CTTGGTCAAAAAGGATATGA+CGG | + | chr7_2:79197635-79197654 | Msa1079920:intron | 35.0% | |
| ACGAGCTTATAGCTTATTTC+AGG | + | chr7_2:79197756-79197775 | Msa1079920:intron | 35.0% | |
| AGATTGAAAACGTAGGAAAC+TGG | - | chr7_2:79197999-79198018 | None:intergenic | 35.0% | |
| GCTCTGTTTGGTAAAAATAG+CGG | - | chr7_2:79198343-79198362 | None:intergenic | 35.0% | |
| ATTTGCCAAACATTGTAACC+AGG | - | chr7_2:79198518-79198537 | None:intergenic | 35.0% | |
| ! | TTTCTCCATTTTGTTGCCGT+AGG | + | chr7_2:79193369-79193388 | Msa1079920:intron | 40.0% |
| ! | TTCTCCATTTTGTTGCCGTA+GGG | + | chr7_2:79193370-79193389 | Msa1079920:intron | 40.0% |
| TAAACCCTACGGCAACAAAA+TGG | - | chr7_2:79193377-79193396 | None:intergenic | 40.0% | |
| !! | GACAGAGTTCAGTTCTGAAA+TGG | - | chr7_2:79193848-79193867 | None:intergenic | 40.0% |
| TCAAAGATTTACCCAGGAAG+AGG | + | chr7_2:79193879-79193898 | Msa1079920:CDS | 40.0% | |
| CAAAGATTTACCCAGGAAGA+GGG | + | chr7_2:79193880-79193899 | Msa1079920:CDS | 40.0% | |
| TAAATCTGATCCCTCTTCCT+GGG | - | chr7_2:79193893-79193912 | None:intergenic | 40.0% | |
| ATAAATCTGATCCCTCTTCC+TGG | - | chr7_2:79193894-79193913 | None:intergenic | 40.0% | |
| !! | TTGAAGGCTTCAACTTGTTG+TGG | - | chr7_2:79194109-79194128 | None:intergenic | 40.0% |
| ATATTATGCATCTGTCGTGC+AGG | + | chr7_2:79194376-79194395 | Msa1079920:intron | 40.0% | |
| TTCAAGTGTAGCACCAACAA+TGG | - | chr7_2:79194462-79194481 | None:intergenic | 40.0% | |
| CCAGAGTCAGCATAATAGAA+AGG | - | chr7_2:79194558-79194577 | None:intergenic | 40.0% | |
| !! | CCTTTCTATTATGCTGACTC+TGG | + | chr7_2:79194555-79194574 | Msa1079920:intron | 40.0% |
| ATTTCACTGCAGGATTGACT+CGG | - | chr7_2:79194802-79194821 | None:intergenic | 40.0% | |
| TCAATCCTGCAGTGAAATCA+AGG | + | chr7_2:79194804-79194823 | Msa1079920:intron | 40.0% | |
| GGAGAGGATAAAGAAAACCA+AGG | + | chr7_2:79194825-79194844 | Msa1079920:CDS | 40.0% | |
| !! | CTTGGCTTTCTTTTCATCCT+TGG | - | chr7_2:79194845-79194864 | None:intergenic | 40.0% |
| ! | CATCTAAGGCACAAAAGTCA+GGG | + | chr7_2:79194878-79194897 | Msa1079920:CDS | 40.0% |
| TTAACAAACACTCGGCATTG+GGG | - | chr7_2:79195434-79195453 | None:intergenic | 40.0% | |
| GTTAACAAACACTCGGCATT+GGG | - | chr7_2:79195435-79195454 | None:intergenic | 40.0% | |
| AGTTAACAAACACTCGGCAT+TGG | - | chr7_2:79195436-79195455 | None:intergenic | 40.0% | |
| ! | TGCCGAGTGTTTGTTAACTT+AGG | + | chr7_2:79195437-79195456 | Msa1079920:intron | 40.0% |
| ! | AACCACGTTGGATGTTTTCA+AGG | + | chr7_2:79195483-79195502 | Msa1079920:intron | 40.0% |
| TTCCTTGAAAACATCCAACG+TGG | - | chr7_2:79195488-79195507 | None:intergenic | 40.0% | |
| TTGTAAGTTACAACCTGGCA+TGG | + | chr7_2:79195537-79195556 | Msa1079920:intron | 40.0% | |
| AGAACATTGTTATCCATGCC+AGG | - | chr7_2:79195553-79195572 | None:intergenic | 40.0% | |
| TTCTTGCCAAGTCCAACTAA+TGG | + | chr7_2:79195569-79195588 | Msa1079920:intron | 40.0% | |
| TTCGAACTTAGGAGACAAGA+AGG | - | chr7_2:79195605-79195624 | None:intergenic | 40.0% | |
| TAAAAGCAAACCCTGCATTG+GGG | + | chr7_2:79195711-79195730 | Msa1079920:intron | 40.0% | |
| TAAAAGCAAACCCTGCATTG+GGG | + | chr7_2:79195711-79195730 | Msa1079920:intron | 40.0% | |
| TTAGAAGAGGAGGAACTACT+TGG | + | chr7_2:79195886-79195905 | Msa1079920:intron | 40.0% | |
| CACTATGAGAAACTAGTGTG+TGG | + | chr7_2:79196070-79196089 | Msa1079920:intron | 40.0% | |
| GTTCACCCGTTCACAAAAAT+GGG | - | chr7_2:79196193-79196212 | None:intergenic | 40.0% | |
| ! | ATATCCGGAAGTTTCTGGAT+CGG | - | chr7_2:79196310-79196329 | None:intergenic | 40.0% |
| AACAAAAAACCGCGTGACTT+GGG | - | chr7_2:79196384-79196403 | None:intergenic | 40.0% | |
| TAACAAAAAACCGCGTGACT+TGG | - | chr7_2:79196385-79196404 | None:intergenic | 40.0% | |
| ! | TTTGGTGTGAAGAATGAGTG+GGG | - | chr7_2:79196436-79196455 | None:intergenic | 40.0% |
| TAGTCTACCTTGCACAAACT+AGG | + | chr7_2:79196681-79196700 | Msa1079920:intron | 40.0% | |
| AGTCTACCTTGCACAAACTA+GGG | + | chr7_2:79196682-79196701 | Msa1079920:intron | 40.0% | |
| !! | GCTTTCTTTAAGACGTTTCG+CGG | - | chr7_2:79196713-79196732 | None:intergenic | 40.0% |
| ACTCACCCAGTAATTTCGTT+CGG | + | chr7_2:79196745-79196764 | Msa1079920:intron | 40.0% | |
| TAAGACTTGGAATCTCAAGG+GGG | + | chr7_2:79197156-79197175 | Msa1079920:intron | 40.0% | |
| !! | AAACTTTTCCCGGCTTTGAT+TGG | - | chr7_2:79197515-79197534 | None:intergenic | 40.0% |
| !! | GTTTTGTTGGAACCAAACCT+TGG | + | chr7_2:79197617-79197636 | Msa1079920:intron | 40.0% |
| GAACCAAACCTTGGTCAAAA+AGG | + | chr7_2:79197626-79197645 | Msa1079920:intron | 40.0% | |
| ! | CGTCATATCCTTTTTGACCA+AGG | - | chr7_2:79197637-79197656 | None:intergenic | 40.0% |
| AAATAGAGGAACTGGAACGT+AGG | - | chr7_2:79197959-79197978 | None:intergenic | 40.0% | |
| ACGTAGGAAACTGGAAAAGT+AGG | - | chr7_2:79197990-79198009 | None:intergenic | 40.0% | |
| AGGCAGAAGATTGAAAACGT+AGG | - | chr7_2:79198006-79198025 | None:intergenic | 40.0% | |
| ! | GTTGGTAAAGGTGAAGATGT+CGG | - | chr7_2:79198365-79198384 | None:intergenic | 40.0% |
| TAATGTTACCATCGTCGAGT+TGG | - | chr7_2:79198383-79198402 | None:intergenic | 40.0% | |
| CTGATCCTGGTTACAATGTT+TGG | + | chr7_2:79198510-79198529 | Msa1079920:three_prime_UTR | 40.0% | |
| ATGTTCCCTATTCCCTATCA+TGG | + | chr7_2:79198538-79198557 | Msa1079920:three_prime_UTR | 40.0% | |
| !! | ACTGAACTCTGTCGATTCAG+TGG | + | chr7_2:79193855-79193874 | Msa1079920:CDS | 45.0% |
| AGTGGCTCAAAGATTTACCC+AGG | + | chr7_2:79193873-79193892 | Msa1079920:CDS | 45.0% | |
| TGAAGCCTTCAAAGCTCACA+TGG | + | chr7_2:79194117-79194136 | Msa1079920:CDS | 45.0% | |
| !! | CTTGTGCTGCTTTCTGTACA+TGG | - | chr7_2:79194147-79194166 | None:intergenic | 45.0% |
| GTACAGAAAGCAGCACAAGA+AGG | + | chr7_2:79194148-79194167 | Msa1079920:CDS | 45.0% | |
| CTCAAGAAGCGGTGAAGAAA+AGG | + | chr7_2:79194405-79194424 | Msa1079920:CDS | 45.0% | |
| AAAGAAAGCCAAGAAAGCCG+AGG | + | chr7_2:79194852-79194871 | Msa1079920:CDS | 45.0% | |
| TTGTGCCTTAGATGCTACCT+CGG | - | chr7_2:79194872-79194891 | None:intergenic | 45.0% | |
| ! | GCATCTAAGGCACAAAAGTC+AGG | + | chr7_2:79194877-79194896 | Msa1079920:CDS | 45.0% |
| TAAGGCACAAAAGTCAGGGA+AGG | + | chr7_2:79194882-79194901 | Msa1079920:CDS | 45.0% | |
| AAGGCACAAAAGTCAGGGAA+GGG | + | chr7_2:79194883-79194902 | Msa1079920:CDS | 45.0% | |
| AGGGAAGGGAAATGTTCAGA+AGG | + | chr7_2:79194897-79194916 | Msa1079920:CDS | 45.0% | |
| GGGAAGGGAAATGTTCAGAA+GGG | + | chr7_2:79194898-79194917 | Msa1079920:CDS | 45.0% | |
| TATGCCCAAGGGTCCTAAAA+TGG | + | chr7_2:79194924-79194943 | Msa1079920:CDS | 45.0% | |
| ATGCCCAAGGGTCCTAAAAT+GGG | + | chr7_2:79194925-79194944 | Msa1079920:CDS | 45.0% | |
| GTCAGTACTTGGCACTTGTT+CGG | + | chr7_2:79195202-79195221 | Msa1079920:intron | 45.0% | |
| ATTCAGAGTTCCCCAATGCA+GGG | - | chr7_2:79195724-79195743 | None:intergenic | 45.0% | |
| AGGGAGAAGCCATTGGTATT+GGG | - | chr7_2:79195790-79195809 | None:intergenic | 45.0% | |
| TGTTATCCCTCAATCGCTGA+GGG | - | chr7_2:79195809-79195828 | None:intergenic | 45.0% | |
| TTGTTATCCCTCAATCGCTG+AGG | - | chr7_2:79195810-79195829 | None:intergenic | 45.0% | |
| AGGAACTACTTGGCCATACA+TGG | + | chr7_2:79195896-79195915 | Msa1079920:intron | 45.0% | |
| GGAACTACTTGGCCATACAT+GGG | + | chr7_2:79195897-79195916 | Msa1079920:intron | 45.0% | |
| CACAAAAATGGGTACCCCAA+GGG | - | chr7_2:79196182-79196201 | None:intergenic | 45.0% | |
| TCACAAAAATGGGTACCCCA+AGG | - | chr7_2:79196183-79196202 | None:intergenic | 45.0% | |
| !! | GGGGTACCCATTTTTGTGAA+CGG | + | chr7_2:79196184-79196203 | Msa1079920:intron | 45.0% |
| !! | GGGTACCCATTTTTGTGAAC+GGG | + | chr7_2:79196185-79196204 | Msa1079920:intron | 45.0% |
| CGTTCACCCGTTCACAAAAA+TGG | - | chr7_2:79196194-79196213 | None:intergenic | 45.0% | |
| ! | TATCCGGAAGTTTCTGGATC+GGG | - | chr7_2:79196309-79196328 | None:intergenic | 45.0% |
| ACAAAAAACCGCGTGACTTG+GGG | - | chr7_2:79196383-79196402 | None:intergenic | 45.0% | |
| TCTACTCCTTTCTGTCCCAT+CGG | + | chr7_2:79196506-79196525 | Msa1079920:intron | 45.0% | |
| !! | TGATCTGGGCTGTTTTATCC+TGG | + | chr7_2:79196643-79196662 | Msa1079920:intron | 45.0% |
| ACGTCTTAAAGAAAGCGACC+TGG | + | chr7_2:79196717-79196736 | Msa1079920:intron | 45.0% | |
| CAAGAGATGCATCCCAACAA+AGG | + | chr7_2:79197387-79197406 | Msa1079920:intron | 45.0% | |
| CTCTAAGTCGCACCTTTGTT+GGG | - | chr7_2:79197402-79197421 | None:intergenic | 45.0% | |
| TCTCTAAGTCGCACCTTTGT+TGG | - | chr7_2:79197403-79197422 | None:intergenic | 45.0% | |
| AAGGTGCGACTTAGAGAGAA+AGG | + | chr7_2:79197406-79197425 | Msa1079920:intron | 45.0% | |
| CTAGCAGTTCCAATCAAAGC+CGG | + | chr7_2:79197503-79197522 | Msa1079920:intron | 45.0% | |
| TAGCAGTTCCAATCAAAGCC+GGG | + | chr7_2:79197504-79197523 | Msa1079920:intron | 45.0% | |
| AAGGATATGACGGCTCTGTT+TGG | + | chr7_2:79197645-79197664 | Msa1079920:intron | 45.0% | |
| !! | TACCATCGTCGAGTTGGTAA+AGG | - | chr7_2:79198377-79198396 | None:intergenic | 45.0% |
| AAGTGCCAAGCTAGGACTTT+AGG | - | chr7_2:79198487-79198506 | None:intergenic | 45.0% | |
| TTCCCTATTCCCTATCATGG+AGG | + | chr7_2:79198541-79198560 | Msa1079920:three_prime_UTR | 45.0% | |
| TGCCTCCATGATAGGGAATA+GGG | - | chr7_2:79198546-79198565 | None:intergenic | 45.0% | |
| TTACAGCTGCCTCCATGATA+GGG | - | chr7_2:79198553-79198572 | None:intergenic | 45.0% | |
| TTTACAGCTGCCTCCATGAT+AGG | - | chr7_2:79198554-79198573 | None:intergenic | 45.0% | |
| !!! | TTTTTTTTAAAGTATAAAAA+TGG | + | chr7_2:79198042-79198061 | Msa1079920:intron | 5.0% |
| ! | GCAGTCCATGTGAGCTTTGA+AGG | - | chr7_2:79194125-79194144 | None:intergenic | 50.0% |
| GCAGGACATTGCTCAAGAAG+CGG | + | chr7_2:79194394-79194413 | Msa1079920:intron | 50.0% | |
| ! | AGTATGGCTTCTTGGTGGCA+CGG | - | chr7_2:79194433-79194452 | None:intergenic | 50.0% |
| CCAACAATGGACCTGGAGTA+TGG | - | chr7_2:79194449-79194468 | None:intergenic | 50.0% | |
| CCATACTCCAGGTCCATTGT+TGG | + | chr7_2:79194446-79194465 | Msa1079920:CDS | 50.0% | |
| TGTAGCACCAACAATGGACC+TGG | - | chr7_2:79194456-79194475 | None:intergenic | 50.0% | |
| CCTCTCCTTGATTTCACTGC+AGG | - | chr7_2:79194812-79194831 | None:intergenic | 50.0% | |
| CCTGCAGTGAAATCAAGGAG+AGG | + | chr7_2:79194809-79194828 | Msa1079920:intron | 50.0% | |
| AGATGCTACCTCGGCTTTCT+TGG | - | chr7_2:79194863-79194882 | None:intergenic | 50.0% | |
| GAAAGCCGAGGTAGCATCTA+AGG | + | chr7_2:79194864-79194883 | Msa1079920:CDS | 50.0% | |
| GATTCAGAGTTCCCCAATGC+AGG | - | chr7_2:79195725-79195744 | None:intergenic | 50.0% | |
| TCCGAAGAGCCCAATACCAA+TGG | + | chr7_2:79195778-79195797 | Msa1079920:intron | 50.0% | |
| ! | GCCATTGGTATTGGGCTCTT+CGG | - | chr7_2:79195782-79195801 | None:intergenic | 50.0% |
| GAGGGAGAAGCCATTGGTAT+TGG | - | chr7_2:79195791-79195810 | None:intergenic | 50.0% | |
| TTGGGGTGACTCTCCAATGT+GGG | - | chr7_2:79196115-79196134 | None:intergenic | 50.0% | |
| TATATATCACGCGCGACGAC+CGG | + | chr7_2:79196225-79196244 | Msa1079920:intron | 50.0% | |
| GACTTAATCCCCAAGTCACG+CGG | + | chr7_2:79196372-79196391 | Msa1079920:intron | 50.0% | |
| TCGAAACCGATGGGACAGAA+AGG | - | chr7_2:79196515-79196534 | None:intergenic | 50.0% | |
| CCGCTCTATTCGAAACCGAT+GGG | - | chr7_2:79196524-79196543 | None:intergenic | 50.0% | |
| !! | CCCATCGGTTTCGAATAGAG+CGG | + | chr7_2:79196521-79196540 | Msa1079920:intron | 50.0% |
| ACCGCTCTATTCGAAACCGA+TGG | - | chr7_2:79196525-79196544 | None:intergenic | 50.0% | |
| TCGATCGAAGCCACTCGATA+CGG | - | chr7_2:79196554-79196573 | None:intergenic | 50.0% | |
| !! | GGGCTGTTTTATCCTGGAGA+CGG | + | chr7_2:79196649-79196668 | Msa1079920:intron | 50.0% |
| ! | GCACTACCCTAGTTTGTGCA+AGG | - | chr7_2:79196691-79196710 | None:intergenic | 50.0% |
| !! | GTGAAGATGTCGGCTCTGTT+TGG | - | chr7_2:79198355-79198374 | None:intergenic | 50.0% |
| CACCTTTACCAACTCGACGA+TGG | + | chr7_2:79198372-79198391 | Msa1079920:intron | 50.0% | |
| TGTGGCCTAAAGTCCTAGCT+TGG | + | chr7_2:79198479-79198498 | Msa1079920:three_prime_UTR | 50.0% | |
| ATCAGCGTAAGTGCCAAGCT+AGG | - | chr7_2:79198495-79198514 | None:intergenic | 50.0% | |
| CTGCCTCCATGATAGGGAAT+AGG | - | chr7_2:79198547-79198566 | None:intergenic | 50.0% | |
| TGGCTGCTTCGTTGATGTGG+TGG | - | chr7_2:79193271-79193290 | None:intergenic | 55.0% | |
| CCATGGCTGCTTCGTTGATG+TGG | - | chr7_2:79193274-79193293 | None:intergenic | 55.0% | |
| CCACATCAACGAAGCAGCCA+TGG | + | chr7_2:79193271-79193290 | Msa1079920:exon | 55.0% | |
| CCTGGAGTATGGCTTCTTGG+TGG | - | chr7_2:79194438-79194457 | None:intergenic | 55.0% | |
| CCACCAAGAAGCCATACTCC+AGG | + | chr7_2:79194435-79194454 | Msa1079920:CDS | 55.0% | |
| GGACCTGGAGTATGGCTTCT+TGG | - | chr7_2:79194441-79194460 | None:intergenic | 55.0% | |
| GAAAAGAACCGAGAAGCCCG+AGG | + | chr7_2:79194493-79194512 | Msa1079920:CDS | 55.0% | |
| ATCTCGAACCTCGGGCTTCT+CGG | - | chr7_2:79194504-79194523 | None:intergenic | 55.0% | |
| CTAGCAGCATCTCGAACCTC+GGG | - | chr7_2:79194512-79194531 | None:intergenic | 55.0% | |
| CCTAGCAGCATCTCGAACCT+CGG | - | chr7_2:79194513-79194532 | None:intergenic | 55.0% | |
| CGAGGTTCGAGATGCTGCTA+GGG | + | chr7_2:79194511-79194530 | Msa1079920:CDS | 55.0% | |
| CTGCTAGGGAAGCTGCTCTT+CGG | + | chr7_2:79194525-79194544 | Msa1079920:CDS | 55.0% | |
| !! | TCAGAAGGGTGCTATGCCCA+AGG | + | chr7_2:79194912-79194931 | Msa1079920:CDS | 55.0% |
| !! | CAGAAGGGTGCTATGCCCAA+GGG | + | chr7_2:79194913-79194932 | Msa1079920:CDS | 55.0% |
| !!! | CCGCCCATTTTAGGACCCTT+GGG | - | chr7_2:79194931-79194950 | None:intergenic | 55.0% |
| CCCAAGGGTCCTAAAATGGG+CGG | + | chr7_2:79194928-79194947 | Msa1079920:CDS | 55.0% | |
| !!! | ACCGCCCATTTTAGGACCCT+TGG | - | chr7_2:79194932-79194951 | None:intergenic | 55.0% |
| AAGGGTCCTAAAATGGGCGG+TGG | + | chr7_2:79194931-79194950 | Msa1079920:CDS | 55.0% | |
| ! | CTAAAATGGGCGGTGGTGGT+GGG | + | chr7_2:79194938-79194957 | Msa1079920:CDS | 55.0% |
| TGTGCGGGAGTTAACCACGT+TGG | + | chr7_2:79195471-79195490 | Msa1079920:intron | 55.0% | |
| CTTCGGAGTTCCCCAATGCA+GGG | - | chr7_2:79195765-79195784 | None:intergenic | 55.0% | |
| TCTTCGGAGTTCCCCAATGC+AGG | - | chr7_2:79195766-79195785 | None:intergenic | 55.0% | |
| ATCGCTGAGGGAGAAGCCAT+TGG | - | chr7_2:79195797-79195816 | None:intergenic | 55.0% | |
| GCTTCTCCCTCAGCGATTGA+GGG | + | chr7_2:79195800-79195819 | Msa1079920:intron | 55.0% | |
| GTTGGGGTGACTCTCCAATG+TGG | - | chr7_2:79196116-79196135 | None:intergenic | 55.0% | |
| ! | CGGAAGTTTCTGGATCGGGT+CGG | - | chr7_2:79196305-79196324 | None:intergenic | 55.0% |
| CGACCCGATCCAGAAACTTC+CGG | + | chr7_2:79196303-79196322 | Msa1079920:intron | 55.0% | |
| ! | GGGGCGAGCTCTCCTTTTAT+AGG | - | chr7_2:79196417-79196436 | None:intergenic | 55.0% |
| CGGTTACGTACCGTATCGAG+TGG | + | chr7_2:79196541-79196560 | Msa1079920:intron | 55.0% | |
| ! | GTTTTATCCTGGAGACGGCG+TGG | + | chr7_2:79196654-79196673 | Msa1079920:intron | 55.0% |
| TTACTGGGTGAGTCACGACC+AGG | - | chr7_2:79196738-79196757 | None:intergenic | 55.0% | |
| CTTGGCACTTACGCTGATCC+TGG | + | chr7_2:79198497-79198516 | Msa1079920:three_prime_UTR | 55.0% | |
| CCGAGGTTCGAGATGCTGCT+AGG | + | chr7_2:79194510-79194529 | Msa1079920:CDS | 60.0% | |
| GGTCCTAAAATGGGCGGTGG+TGG | + | chr7_2:79194934-79194953 | Msa1079920:CDS | 60.0% | |
| ! | CCACCACCACCGCCCATTTT+AGG | - | chr7_2:79194940-79194959 | None:intergenic | 60.0% |
| ! | CCTAAAATGGGCGGTGGTGG+TGG | + | chr7_2:79194937-79194956 | Msa1079920:CDS | 60.0% |
| GGCTTCTCCCTCAGCGATTG+AGG | + | chr7_2:79195799-79195818 | Msa1079920:intron | 60.0% | |
| TAAGGGTGGGGTGACCTCCA+AGG | + | chr7_2:79196151-79196170 | Msa1079920:intron | 60.0% | |
| AAGGGTGGGGTGACCTCCAA+GGG | + | chr7_2:79196152-79196171 | Msa1079920:intron | 60.0% | |
| ! | ACCTCCAAGGGTGTGCCCTT+GGG | + | chr7_2:79196164-79196183 | Msa1079920:intron | 60.0% |
| CTATCAACCACGCCGTCTCC+AGG | - | chr7_2:79196664-79196683 | None:intergenic | 60.0% | |
| ! | GACCTCCAAGGGTGTGCCCT+TGG | + | chr7_2:79196163-79196182 | Msa1079920:intron | 65.0% |
| ! | CCTCCAAGGGTGTGCCCTTG+GGG | + | chr7_2:79196165-79196184 | Msa1079920:intron | 65.0% |
| ! | GTACCCCAAGGGCACACCCT+TGG | - | chr7_2:79196171-79196190 | None:intergenic | 65.0% |
| ! | CCCCAAGGGCACACCCTTGG+AGG | - | chr7_2:79196168-79196187 | None:intergenic | 70.0% |
| TATCACGCGCGACGACCGGC+CGG | + | chr7_2:79196229-79196248 | Msa1079920:intron | 70.0% | |
| ATCACGCGCGACGACCGGCC+GGG | + | chr7_2:79196230-79196249 | Msa1079920:intron | 75.0% | |
| CCCACGCCCAAGCCCAAGCC+CGG | - | chr7_2:79196256-79196275 | None:intergenic | 75.0% | |
| CCGGGCTTGGGCTTGGGCGT+GGG | + | chr7_2:79196253-79196272 | Msa1079920:intron | 75.0% | |
| ! | AAGCCCAAGCCCGGCCCGGC+CGG | - | chr7_2:79196247-79196266 | None:intergenic | 80.0% |
| ! | GCCGGGCCGGGCTTGGGCTT+GGG | + | chr7_2:79196247-79196266 | Msa1079920:intron | 80.0% |
| ! | GCCCAAGCCCAAGCCCGGCC+CGG | - | chr7_2:79196251-79196270 | None:intergenic | 80.0% |
| ! | GCCGGGCTTGGGCTTGGGCG+TGG | + | chr7_2:79196252-79196271 | Msa1079920:intron | 80.0% |
| ! | ACGACCGGCCGGGCCGGGCT+TGG | + | chr7_2:79196240-79196259 | Msa1079920:intron | 85.0% |
| ! | CGACCGGCCGGGCCGGGCTT+GGG | + | chr7_2:79196241-79196260 | Msa1079920:intron | 85.0% |
| ! | GGCCGGGCCGGGCTTGGGCT+TGG | + | chr7_2:79196246-79196265 | Msa1079920:intron | 85.0% |
| ! | CGCGCGACGACCGGCCGGGC+CGG | + | chr7_2:79196234-79196253 | Msa1079920:intron | 90.0% |
| ! | GCGCGACGACCGGCCGGGCC+GGG | + | chr7_2:79196235-79196254 | Msa1079920:intron | 90.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 79193220 | 79198649 | 79193220 | ID=Msa1079920;Name=Msa1079920 |
| chr7_2 | mRNA | 79193220 | 79198649 | 79193220 | ID=Msa1079920-mRNA-1;Parent=Msa1079920;Name=Msa1079920-mRNA-1;_AED=0.31;_eAED=0.31;_QI=70|1|1|1|0.8|0.66|6|391|163 |
| chr7_2 | exon | 79193220 | 79193300 | 79193220 | ID=Msa1079920-mRNA-1:exon:19895;Parent=Msa1079920-mRNA-1 |
| chr7_2 | exon | 79193854 | 79193929 | 79193854 | ID=Msa1079920-mRNA-1:exon:19896;Parent=Msa1079920-mRNA-1 |
| chr7_2 | exon | 79194068 | 79194169 | 79194068 | ID=Msa1079920-mRNA-1:exon:19897;Parent=Msa1079920-mRNA-1 |
| chr7_2 | exon | 79194398 | 79194546 | 79194398 | ID=Msa1079920-mRNA-1:exon:19898;Parent=Msa1079920-mRNA-1 |
| chr7_2 | exon | 79194816 | 79195167 | 79194816 | ID=Msa1079920-mRNA-1:exon:19899;Parent=Msa1079920-mRNA-1 |
| chr7_2 | exon | 79198457 | 79198649 | 79198457 | ID=Msa1079920-mRNA-1:exon:19900;Parent=Msa1079920-mRNA-1 |
| chr7_2 | five_prime_UTR | 79193220 | 79193289 | 79193220 | ID=Msa1079920-mRNA-1:five_prime_utr;Parent=Msa1079920-mRNA-1 |
| chr7_2 | CDS | 79193290 | 79193300 | 79193290 | ID=Msa1079920-mRNA-1:cds;Parent=Msa1079920-mRNA-1 |
| chr7_2 | CDS | 79193854 | 79193929 | 79193854 | ID=Msa1079920-mRNA-1:cds;Parent=Msa1079920-mRNA-1 |
| chr7_2 | CDS | 79194068 | 79194169 | 79194068 | ID=Msa1079920-mRNA-1:cds;Parent=Msa1079920-mRNA-1 |
| chr7_2 | CDS | 79194398 | 79194546 | 79194398 | ID=Msa1079920-mRNA-1:cds;Parent=Msa1079920-mRNA-1 |
| chr7_2 | CDS | 79194816 | 79194969 | 79194816 | ID=Msa1079920-mRNA-1:cds;Parent=Msa1079920-mRNA-1 |
| chr7_2 | three_prime_UTR | 79194970 | 79195167 | 79194970 | ID=Msa1079920-mRNA-1:three_prime_utr;Parent=Msa1079920-mRNA-1 |
| chr7_2 | three_prime_UTR | 79198457 | 79198649 | 79198457 | ID=Msa1079920-mRNA-1:three_prime_utr;Parent=Msa1079920-mRNA-1 |
| Gene Sequence |
| Protein sequence |
