AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0975440

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0975440 MtrunA17_Chr6g0454291 90.311 289 28 0 1 289 191 479 0.0 551
Msa0975440 MtrunA17_Chr6g0454331 87.372 293 37 0 1 293 193 485 0.0 541
Msa0975440 MtrunA17_Chr6g0454211 86.689 293 39 0 1 293 481 773 0.0 530
Msa0975440 MtrunA17_Chr6g0454211 52.098 286 55 3 1 286 64 267 1.07e-88 280
Msa0975440 MtrunA17_Chr6g0454271 81.570 293 54 0 1 293 1 293 0.0 504
Msa0975440 MtrunA17_Chr6g0454201 77.663 291 65 0 1 291 195 485 1.68e-172 486
Msa0975440 MtrunA17_Chr6g0454181 76.976 291 67 0 1 291 194 484 2.44e-171 483
Msa0975440 MtrunA17_Chr5g0423981 77.586 290 65 0 1 290 159 448 5.95e-171 481
Msa0975440 MtrunA17_Chr6g0454191 78.007 291 64 0 1 291 195 485 7.54e-171 482
Msa0975440 MtrunA17_Chr6g0453961 77.241 290 66 0 1 290 204 493 1.17e-170 481
Msa0975440 MtrunA17_Chr6g0454401 77.586 290 65 0 1 290 195 484 5.76e-170 479
Msa0975440 MtrunA17_Chr8g0359821 76.109 293 70 0 1 293 192 484 1.18e-169 479
Msa0975440 MtrunA17_Chr6g0454121 76.632 291 68 0 1 291 193 483 6.64e-169 477
Msa0975440 MtrunA17_Chr6g0454131 77.931 290 64 0 1 290 193 482 2.24e-168 475
Msa0975440 MtrunA17_Chr6g0452771 75.517 290 71 0 1 290 194 483 1.28e-164 466
Msa0975440 MtrunA17_Chr6g0454261 73.720 293 77 0 1 293 194 486 1.01e-163 464
Msa0975440 MtrunA17_Chr6g0454141 73.540 291 77 0 1 291 194 484 1.94e-163 463
Msa0975440 MtrunA17_Chr6g0453951 73.103 290 78 0 1 290 241 530 2.89e-163 464
Msa0975440 MtrunA17_Chr6g0454341 73.973 292 75 1 1 291 191 482 3.77e-163 462
Msa0975440 MtrunA17_Chr6g0454361 73.103 290 78 0 1 290 195 484 2.76e-161 457
Msa0975440 MtrunA17_Chr8g0336331 74.315 292 74 1 1 291 190 481 3.47e-161 457
Msa0975440 MtrunA17_Chr3g0078841 73.630 292 76 1 1 291 191 482 4.51e-161 457
Msa0975440 MtrunA17_Chr7g0217881 73.103 290 78 0 1 290 176 465 1.28e-160 455
Msa0975440 MtrunA17_Chr6g0454301 74.138 290 74 1 1 289 444 733 5.77e-157 455
Msa0975440 MtrunA17_Chr6g0454301 82.609 230 40 0 59 288 2 231 6.56e-135 399
Msa0975440 MtrunA17_Chr6g0454151 73.010 289 76 1 1 289 194 480 3.53e-156 444
Msa0975440 MtrunA17_Chr6g0454351 67.931 290 76 1 1 290 196 468 5.15e-149 426
Msa0975440 MtrunA17_Chr6g0454321 68.512 289 90 1 1 288 191 479 2.49e-146 425
Msa0975440 MtrunA17_Chr8g0355011 70.990 293 43 2 1 293 118 368 1.07e-145 414
Msa0975440 MtrunA17_Chr6g0454171 68.641 287 69 3 9 290 43 313 2.16e-139 395
Msa0975440 MtrunA17_Chr6g0454221 82.018 228 40 1 59 285 2 229 2.97e-137 390
Msa0975440 MtrunA17_Chr6g0454251 84.390 205 32 0 1 205 191 395 5.81e-127 367
Msa0975440 MtrunA17_Chr3g0092641 57.439 289 121 2 1 288 192 479 4.08e-119 350
Msa0975440 MtrunA17_Chr5g0426431 56.552 290 124 2 1 289 192 480 2.56e-117 345
Msa0975440 MtrunA17_Chr5g0426401 53.952 291 130 3 1 288 23 312 3.87e-113 329
Msa0975440 MtrunA17_Chr2g0278711 54.795 292 128 3 1 288 187 478 1.54e-109 325
Msa0975440 MtrunA17_Chr3g0118721 52.414 290 135 2 1 287 1 290 1.84e-107 314
Msa0975440 MtrunA17_Chr3g0118711 53.448 290 132 2 1 287 192 481 6.61e-107 319
Msa0975440 MtrunA17_Chr3g0118771 52.069 290 136 2 1 287 200 489 2.12e-106 318
Msa0975440 MtrunA17_Chr4g0050341 52.431 288 132 2 1 283 200 487 2.36e-105 315
Msa0975440 MtrunA17_Chr6g0454231 62.500 256 57 3 33 287 2 219 4.09e-105 314
Msa0975440 MtrunA17_Chr3g0118691 51.379 290 138 2 1 287 194 483 2.26e-104 313
Msa0975440 MtrunA17_Chr3g0118701 50.000 290 142 2 1 287 194 483 8.04e-104 311
Msa0975440 MtrunA17_Chr3g0118671 51.034 290 139 2 1 287 185 474 9.90e-103 308
Msa0975440 MtrunA17_Chr6g0454371 75.287 174 43 0 117 290 1 174 4.10e-97 283
Msa0975440 MtrunA17_Chr3g0118661 50.519 289 139 3 1 286 192 479 5.63e-90 276
Msa0975440 MtrunA17_Chr3g0118751 46.713 289 124 3 1 287 185 445 4.45e-87 267
Msa0975440 MtrunA17_Chr8g0336261 81.022 137 26 0 117 253 1 137 9.86e-81 240
Msa0975440 MtrunA17_Chr6g0453981 68.452 168 53 0 1 168 64 231 1.23e-80 243
Msa0975440 MtrunA17_Chr6g0453941 69.375 160 48 1 1 159 116 275 2.67e-74 229
Msa0975440 MtrunA17_Chr5g0412111 40.071 282 167 2 5 286 182 461 1.52e-72 230
Msa0975440 MtrunA17_Chr3g0112771 37.884 293 171 5 4 293 174 458 1.59e-68 219
Msa0975440 MtrunA17_Chr5g0412131 39.510 286 167 4 4 286 187 469 2.27e-66 214
Msa0975440 MtrunA17_Chr5g0412101 38.112 286 172 3 4 286 187 470 1.02e-65 213
Msa0975440 MtrunA17_Chr6g0454111 67.153 137 45 0 1 137 47 183 3.13e-64 200
Msa0975440 MtrunA17_Chr1g0207981 34.708 291 180 4 4 288 188 474 1.02e-60 200
Msa0975440 MtrunA17_Chr4g0032331 36.879 282 158 7 4 278 175 443 4.61e-57 189
Msa0975440 MtrunA17_Chr3g0112761 35.069 288 177 6 4 287 169 450 2.53e-55 185
Msa0975440 MtrunA17_Chr8g0365811 35.473 296 175 6 4 286 665 957 8.56e-54 188
Msa0975440 MtrunA17_Chr8g0365811 35.793 271 156 5 4 260 183 449 1.91e-48 172
Msa0975440 MtrunA17_Chr3g0098111 34.589 292 179 4 4 286 181 469 2.09e-53 181
Msa0975440 MtrunA17_Chr1g0207931 37.891 256 149 3 39 286 244 497 9.30e-53 179
Msa0975440 MtrunA17_Chr7g0218831 38.211 246 129 5 42 283 210 436 4.60e-50 171
Msa0975440 MtrunA17_Chr6g0462571 33.333 291 163 6 7 282 183 457 6.28e-50 171
Msa0975440 MtrunA17_Chr1g0161351 34.708 291 180 3 4 286 209 497 1.42e-49 171
Msa0975440 MtrunA17_Chr7g0218841 38.211 246 129 5 42 283 211 437 4.06e-49 169
Msa0975440 MtrunA17_Chr1g0207951 33.564 289 177 4 4 286 291 570 9.81e-49 173
Msa0975440 MtrunA17_Chr1g0207951 38.976 254 135 5 42 286 866 1108 9.57e-47 168
Msa0975440 MtrunA17_Chr7g0218791 40.244 246 122 8 42 283 217 441 1.94e-48 167
Msa0975440 MtrunA17_Chr1g0207971 34.007 297 166 8 4 286 173 453 2.04e-48 167
Msa0975440 MtrunA17_Chr6g0462521 34.364 291 161 6 4 279 168 443 9.82e-48 165
Msa0975440 MtrunA17_Chr4g0053501 31.208 298 191 6 4 291 176 469 1.01e-47 166
Msa0975440 MtrunA17_Chr4g0053321 33.984 256 156 5 46 291 232 484 1.75e-47 166
Msa0975440 MtrunA17_Chr6g0462541 32.095 296 170 6 2 282 180 459 2.45e-47 165
Msa0975440 MtrunA17_Chr5g0401721 33.333 261 163 4 39 291 218 475 3.63e-47 164
Msa0975440 MtrunA17_Chr1g0207861 34.021 291 182 3 4 286 180 468 5.46e-47 164
Msa0975440 MtrunA17_Chr7g0232311 34.667 300 162 8 4 283 175 460 2.55e-46 162
Msa0975440 MtrunA17_Chr5g0427561 78.652 89 19 0 203 291 1 89 3.07e-46 150
Msa0975440 MtrunA17_Chr8g0377941 33.898 295 164 8 7 287 185 462 5.90e-46 161
Msa0975440 MtrunA17_Chr1g0207831 35.798 257 147 5 39 286 216 463 7.27e-46 160
Msa0975440 MtrunA17_Chr7g0250001 30.375 293 192 5 1 287 162 448 8.05e-46 160
Msa0975440 MtrunA17_Chr5g0414321 33.681 288 178 8 7 287 171 452 8.72e-46 160
Msa0975440 MtrunA17_Chr7g0218821 35.931 231 120 5 42 260 221 435 9.82e-46 160
Msa0975440 MtrunA17_Chr7g0243631 33.670 297 175 5 9 286 193 486 1.13e-45 160
Msa0975440 MtrunA17_Chr5g0414331 33.451 284 176 7 7 283 173 450 1.59e-45 159
Msa0975440 MtrunA17_Chr8g0377921 32.890 301 181 8 4 287 168 464 1.77e-45 159
Msa0975440 MtrunA17_Chr6g0462531 31.579 304 178 6 2 291 180 467 2.21e-45 159
Msa0975440 MtrunA17_Chr7g0249981 32.292 288 183 6 6 287 186 467 3.68e-45 159
Msa0975440 MtrunA17_Chr4g0044511 38.208 212 116 3 90 286 293 504 4.75e-45 159
Msa0975440 MtrunA17_Chr7g0218811 35.366 246 136 6 42 283 220 446 1.55e-44 157
Msa0975440 MtrunA17_Chr7g0243931 34.672 274 158 7 33 286 218 490 2.23e-44 157
Msa0975440 MtrunA17_Chr6g0449931 33.559 295 159 8 8 279 180 460 4.69e-44 156
Msa0975440 MtrunA17_Chr6g0464871 32.292 288 171 7 8 283 188 463 5.88e-44 155
Msa0975440 MtrunA17_Chr8g0347281 34.146 287 158 8 7 275 188 461 6.07e-44 155
Msa0975440 MtrunA17_Chr8g0373301 33.333 279 152 8 4 262 178 442 1.60e-43 154
Msa0975440 MtrunA17_Chr7g0232401 31.142 289 172 7 8 279 182 460 4.27e-43 153
Msa0975440 MtrunA17_Chr8g0347271 33.448 290 162 8 4 275 186 462 7.42e-43 153
Msa0975440 MtrunA17_Chr6g0462551 31.741 293 166 8 8 282 184 460 8.41e-43 152
Msa0975440 MtrunA17_Chr7g0243801 33.108 296 174 8 9 286 187 476 9.72e-43 152
Msa0975440 MtrunA17_Chr6g0464841 31.802 283 179 6 8 283 176 451 4.02e-42 150
Msa0975440 MtrunA17_Chr6g0464881 30.479 292 189 7 8 292 176 460 4.66e-42 150
Msa0975440 MtrunA17_Chr4g0060511 33.221 298 175 8 9 286 194 487 5.55e-42 150
Msa0975440 MtrunA17_Chr7g0243951 33.942 274 159 8 33 286 212 483 6.30e-42 150
Msa0975440 MtrunA17_Chr8g0336741 31.908 304 168 9 7 289 185 470 8.56e-42 150
Msa0975440 MtrunA17_Chr8g0339601 41.667 192 92 4 94 265 118 309 1.03e-41 146
Msa0975440 MtrunA17_Chr1g0173121 31.930 285 161 6 22 286 191 462 1.15e-41 149
Msa0975440 MtrunA17_Chr5g0393591 32.500 280 151 5 9 286 192 435 1.44e-41 149
Msa0975440 MtrunA17_Chr7g0243771 32.770 296 175 8 9 286 186 475 1.58e-41 149
Msa0975440 MtrunA17_Chr7g0235051 31.419 296 180 7 9 285 161 452 2.19e-41 149
Msa0975440 MtrunA17_Chr4g0014061 33.333 297 168 7 6 283 184 469 3.06e-41 148
Msa0975440 MtrunA17_Chr8g0336731 30.070 286 171 5 17 283 212 487 3.44e-41 149
Msa0975440 MtrunA17_Chr8g0339461 41.667 192 92 4 94 265 259 450 3.73e-41 148
Msa0975440 MtrunA17_Chr7g0243681 31.650 297 176 7 9 286 191 479 4.09e-41 148
Msa0975440 MtrunA17_Chr8g0380531 30.584 291 188 7 4 286 173 457 6.51e-41 147
Msa0975440 MtrunA17_Chr8g0339451 41.667 192 92 4 94 265 251 442 7.54e-41 147
Msa0975440 MtrunA17_Chr6g0464921 31.010 287 187 5 8 288 176 457 8.42e-41 147
Msa0975440 MtrunA17_Chr7g0232391 28.912 294 185 7 8 285 179 464 8.94e-41 147
Msa0975440 MtrunA17_Chr5g0431441 31.773 299 181 8 3 292 187 471 1.03e-40 147
Msa0975440 MtrunA17_Chr6g0459311 31.935 310 170 11 4 292 184 473 1.09e-40 147
Msa0975440 MtrunA17_Chr1g0153451 30.392 306 175 7 4 289 175 462 1.49e-40 146
Msa0975440 MtrunA17_Chr8g0336651 37.788 217 111 5 93 289 1030 1242 1.89e-40 149
Msa0975440 MtrunA17_Chr8g0336651 30.479 292 173 6 11 282 179 460 6.26e-40 148
Msa0975440 MtrunA17_Chr8g0336651 35.644 202 102 4 93 289 595 773 1.91e-34 132
Msa0975440 MtrunA17_Chr8g0339441 40.625 192 94 4 94 265 217 408 1.92e-40 145
Msa0975440 MtrunA17_Chr8g0335141 33.103 290 164 10 4 275 180 457 3.67e-40 145
Msa0975440 MtrunA17_Chr7g0249961 33.984 256 155 7 32 279 3 252 4.64e-40 140
Msa0975440 MtrunA17_Chr1g0159551 30.662 287 167 6 20 286 185 459 4.66e-40 145
Msa0975440 MtrunA17_Chr4g0011051 31.595 326 179 9 4 293 177 494 4.84e-40 145
Msa0975440 MtrunA17_Chr6g0464861 31.560 282 181 6 8 283 175 450 6.79e-40 144
Msa0975440 MtrunA17_Chr7g0265041 30.312 320 185 10 4 291 180 493 9.55e-40 145
Msa0975440 MtrunA17_Chr7g0232411 29.811 265 162 6 38 285 207 464 1.20e-39 144
Msa0975440 MtrunA17_Chr3g0121991 31.250 304 185 9 3 286 246 545 1.45e-39 145
Msa0975440 MtrunA17_Chr8g0336691 38.308 201 106 3 93 275 1168 1368 1.53e-39 147
Msa0975440 MtrunA17_Chr8g0336691 29.054 296 175 6 15 289 191 472 1.19e-37 141
Msa0975440 MtrunA17_Chr8g0336691 36.634 202 104 5 93 289 729 911 4.01e-35 134
Msa0975440 MtrunA17_Chr7g0243851 32.740 281 169 7 33 293 170 450 1.89e-39 143
Msa0975440 MtrunA17_Chr6g0486251 31.034 290 169 9 4 275 177 453 2.06e-39 143
Msa0975440 MtrunA17_Chr6g0486201 31.034 290 169 9 4 275 177 453 2.06e-39 143
Msa0975440 MtrunA17_Chr5g0431401 29.630 297 181 6 1 286 169 448 2.07e-39 143
Msa0975440 MtrunA17_Chr5g0431361 30.466 279 168 5 19 286 190 453 2.08e-39 143
Msa0975440 MtrunA17_Chr5g0432731 31.864 295 168 9 9 287 20 297 2.42e-39 139
Msa0975440 MtrunA17_Chr7g0243781 29.866 298 178 7 9 286 189 475 3.07e-39 143
Msa0975440 MtrunA17_Chr8g0366391 34.286 315 165 12 4 286 173 477 3.19e-39 143
Msa0975440 MtrunA17_Chr8g0339631 36.893 206 111 5 92 279 257 461 4.79e-39 142
Msa0975440 MtrunA17_Chr1g0165701 32.313 294 179 7 9 286 194 483 4.97e-39 143
Msa0975440 MtrunA17_Chr8g0335161 32.069 290 167 9 4 275 178 455 4.97e-39 142
Msa0975440 MtrunA17_Chr4g0044501 31.949 313 172 10 4 286 174 475 9.77e-39 142
Msa0975440 MtrunA17_Chr3g0122001 33.457 269 162 6 34 286 206 473 1.15e-38 144
Msa0975440 MtrunA17_Chr3g0122001 30.743 296 189 6 7 286 657 952 2.36e-38 143
Msa0975440 MtrunA17_Chr7g0243871 32.959 267 148 8 40 286 217 472 1.63e-38 141
Msa0975440 MtrunA17_Chr8g0382021 33.459 266 149 7 40 286 232 488 1.98e-38 141
Msa0975440 MtrunA17_Chr7g0265101 31.804 327 168 11 4 289 177 489 2.35e-38 141
Msa0975440 MtrunA17_Chr4g0044521 35.000 220 111 5 90 284 252 464 2.62e-38 140
Msa0975440 MtrunA17_Chr5g0431421 29.866 298 181 6 1 287 169 449 5.85e-38 139
Msa0975440 MtrunA17_Chr7g0265151 29.747 316 185 9 4 287 174 484 6.20e-38 139
Msa0975440 MtrunA17_Chr7g0275511 30.108 279 170 6 15 275 193 464 6.54e-38 139
Msa0975440 MtrunA17_Chr7g0243861 31.387 274 167 7 33 286 215 487 8.34e-38 139
Msa0975440 MtrunA17_Chr8g0334851 29.455 275 169 7 8 265 182 448 1.02e-37 139
Msa0975440 MtrunA17_Chr8g0355221 29.630 297 186 7 9 286 194 486 1.03e-37 139
Msa0975440 MtrunA17_Chr7g0275681 31.646 316 172 12 4 287 178 481 1.78e-37 138
Msa0975440 MtrunA17_Chr5g0442541 29.861 288 168 5 25 287 188 466 2.53e-37 137
Msa0975440 MtrunA17_Chr5g0442521 29.066 289 163 6 25 283 196 472 3.31e-37 137
Msa0975440 MtrunA17_Chr7g0249931 27.778 288 194 7 7 287 204 484 3.56e-37 137
Msa0975440 MtrunA17_Chr5g0448521 30.634 284 157 7 33 287 196 468 3.80e-37 137
Msa0975440 MtrunA17_Chr5g0442601 29.758 289 167 7 25 287 598 876 3.86e-37 140
Msa0975440 MtrunA17_Chr5g0442601 34.078 179 101 2 61 227 160 333 3.20e-25 105
Msa0975440 MtrunA17_Chr7g0265141 33.829 269 159 5 38 287 218 486 4.88e-37 137
Msa0975440 MtrunA17_Chr1g0179901 30.935 278 164 7 34 287 221 494 4.89e-37 137
Msa0975440 MtrunA17_Chr5g0442581 28.669 293 175 6 25 291 197 481 5.62e-37 137
Msa0975440 MtrunA17_Chr8g0374931 31.818 308 183 9 4 286 176 481 7.43e-37 137
Msa0975440 MtrunA17_Chr2g0294921 32.362 309 182 9 3 286 324 630 7.45e-37 138
Msa0975440 MtrunA17_Chr4g0066131 35.814 215 113 5 93 283 258 471 8.51e-37 136
Msa0975440 MtrunA17_Chr7g0243611 33.043 230 147 4 9 234 52 278 9.84e-37 132
Msa0975440 MtrunA17_Chr3g0079731 30.662 287 151 7 32 284 206 478 1.19e-36 136
Msa0975440 MtrunA17_Chr1g0153461 35.749 207 116 4 93 282 2 208 1.25e-36 130
Msa0975440 MtrunA17_Chr7g0243761 31.915 282 170 8 9 286 191 454 1.47e-36 135
Msa0975440 MtrunA17_Chr7g0265051 32.482 274 159 7 38 289 218 487 2.30e-36 135
Msa0975440 MtrunA17_Chr5g0431371 29.630 297 181 7 1 286 169 448 2.34e-36 135
Msa0975440 MtrunA17_Chr5g0403641 35.211 213 116 5 95 285 289 501 2.89e-36 135
Msa0975440 MtrunA17_Chr5g0440421 28.155 309 190 10 4 287 193 494 2.93e-36 135
Msa0975440 MtrunA17_Chr4g0072761 30.986 284 179 5 4 286 185 452 3.01e-36 134
Msa0975440 MtrunA17_Chr5g0442561 30.325 277 155 6 38 287 208 473 3.17e-36 135
Msa0975440 MtrunA17_Chr5g0419771 31.915 282 158 8 35 287 237 513 3.26e-36 135
Msa0975440 MtrunA17_Chr7g0232341 29.508 244 150 5 38 265 207 444 5.06e-36 134
Msa0975440 MtrunA17_Chr5g0429711 32.836 268 153 8 32 286 208 461 5.37e-36 134
Msa0975440 MtrunA17_Chr4g0066261 31.629 313 179 10 3 286 175 481 6.03e-36 134
Msa0975440 MtrunA17_Chr8g0374901 30.333 300 174 8 16 286 185 478 1.17e-35 133
Msa0975440 MtrunA17_Chr7g0232331 29.508 244 150 5 38 265 207 444 1.30e-35 133
Msa0975440 MtrunA17_Chr5g0442491 30.000 290 158 8 27 287 202 475 1.44e-35 133
Msa0975440 MtrunA17_Chr3g0106251 28.374 289 181 6 9 287 22 294 1.88e-35 129
Msa0975440 MtrunA17_Chr7g0218311 34.545 220 122 5 89 286 264 483 1.94e-35 133
Msa0975440 MtrunA17_Chr4g0066151 34.529 223 123 4 93 292 263 485 2.09e-35 133
Msa0975440 MtrunA17_Chr4g0072771 31.765 255 158 4 33 286 226 465 3.75e-35 132
Msa0975440 MtrunA17_Chr5g0442511 28.819 288 169 7 25 286 216 493 4.10e-35 132
Msa0975440 MtrunA17_Chr7g0243711 31.439 264 156 8 41 286 60 316 4.39e-35 129
Msa0975440 MtrunA17_Chr5g0401851 28.283 297 191 6 9 286 190 483 5.33e-35 132
Msa0975440 MtrunA17_Chr5g0419761 33.333 222 128 5 90 291 269 490 7.63e-35 131
Msa0975440 MtrunA17_Chr4g0066201 36.111 216 113 5 93 286 262 474 1.08e-34 130
Msa0975440 MtrunA17_Chr2g0294931 32.014 278 163 8 33 286 206 481 1.49e-34 130
Msa0975440 MtrunA17_Chr8g0374971 33.641 217 121 4 93 286 264 480 2.02e-34 130
Msa0975440 MtrunA17_Chr4g0066221 29.841 315 193 8 3 291 173 485 2.33e-34 130
Msa0975440 MtrunA17_Chr8g0361371 27.451 306 181 8 3 283 178 467 2.57e-34 129
Msa0975440 MtrunA17_Chr8g0374941 35.000 220 114 4 93 286 1201 1417 4.50e-34 131
Msa0975440 MtrunA17_Chr8g0374941 29.260 311 178 10 3 283 637 935 2.84e-32 126
Msa0975440 MtrunA17_Chr8g0374941 34.328 201 103 4 93 267 263 460 4.89e-31 122
Msa0975440 MtrunA17_Chr4g0066281 35.185 216 115 4 93 286 254 466 4.90e-34 129
Msa0975440 MtrunA17_Chr8g0369341 29.333 300 184 9 4 290 186 470 5.82e-34 129
Msa0975440 MtrunA17_Chr4g0042891 28.912 294 178 8 9 285 185 464 7.28e-34 128
Msa0975440 MtrunA17_Chr2g0294941 31.507 292 167 10 4 267 74 360 1.54e-33 126
Msa0975440 MtrunA17_Chr5g0428081 30.847 295 178 8 16 286 187 479 1.74e-33 127
Msa0975440 MtrunA17_Chr5g0416741 28.231 294 192 5 9 286 193 483 1.83e-33 127
Msa0975440 MtrunA17_Chr8g0334861 27.148 291 174 8 19 285 186 462 2.74e-33 127
Msa0975440 MtrunA17_Chr8g0370941 28.328 293 156 8 35 284 205 486 3.80e-33 127
Msa0975440 MtrunA17_Chr3g0106231 28.669 293 184 7 5 287 175 452 4.56e-33 126
Msa0975440 MtrunA17_Chr2g0307961 29.845 258 166 8 38 288 221 470 9.38e-33 125
Msa0975440 MtrunA17_Chr8g0350881 33.641 217 121 4 93 286 264 480 1.21e-32 125
Msa0975440 MtrunA17_Chr7g0243911 36.757 185 100 3 90 257 17 201 2.01e-32 119
Msa0975440 MtrunA17_Chr5g0409591 31.679 262 139 8 33 266 207 456 2.26e-32 124
Msa0975440 MtrunA17_Chr5g0410941 31.596 307 178 10 9 286 186 489 2.72e-32 124
Msa0975440 MtrunA17_Chr6g0463891 28.904 301 194 7 9 292 193 490 8.29e-32 123
Msa0975440 MtrunA17_Chr6g0463851 32.258 217 124 4 93 286 266 482 1.19e-31 122
Msa0975440 MtrunA17_Chr5g0448551 33.036 224 126 6 46 254 204 418 1.74e-31 122
Msa0975440 MtrunA17_Chr8g0334831 27.645 293 163 9 3 262 177 453 2.68e-31 121
Msa0975440 MtrunA17_Chr5g0429681 33.209 268 151 9 32 283 241 496 2.81e-31 122
Msa0975440 MtrunA17_Chr2g0302991 28.571 301 178 7 9 286 176 462 3.37e-31 121
Msa0975440 MtrunA17_Chr5g0420801 27.027 296 191 8 3 286 176 458 3.89e-31 120
Msa0975440 MtrunA17_Chr6g0463861 27.937 315 193 8 1 286 164 473 4.52e-31 120
Msa0975440 MtrunA17_Chr6g0454391 59.770 87 34 1 179 265 11 96 2.23e-30 110
Msa0975440 MtrunA17_Chr7g0241801 39.306 173 94 5 95 263 241 406 2.54e-30 118
Msa0975440 MtrunA17_Chr1g0207881 41.860 129 69 1 164 286 256 384 4.06e-30 117
Msa0975440 MtrunA17_Chr2g0302961 28.417 278 162 6 32 286 202 465 4.49e-30 118
Msa0975440 MtrunA17_Chr4g0066171 33.636 220 119 5 93 290 264 478 7.15e-30 117
Msa0975440 MtrunA17_Chr7g0241781 39.884 173 93 5 95 263 241 406 7.18e-30 117
Msa0975440 MtrunA17_Chr5g0416821 29.153 295 188 9 9 292 195 479 9.91e-30 117
Msa0975440 MtrunA17_Chr4g0042931 29.286 280 169 8 25 285 193 462 3.84e-29 115
Msa0975440 MtrunA17_Chr4g0044481 33.065 248 131 10 4 229 165 399 4.87e-29 114
Msa0975440 MtrunA17_Chr7g0265111 32.314 229 125 5 83 287 294 516 6.14e-29 115
Msa0975440 MtrunA17_Chr7g0243811 32.995 197 120 4 42 234 194 382 2.02e-28 112
Msa0975440 MtrunA17_Chr8g0336321 37.356 174 104 3 92 260 266 439 2.14e-28 113
Msa0975440 MtrunA17_Chr2g0329111 29.502 261 145 10 38 273 217 463 2.49e-28 113
Msa0975440 MtrunA17_Chr5g0427571 36.782 174 105 3 92 260 100 273 3.94e-28 110
Msa0975440 MtrunA17_Chr3g0079711 33.152 184 103 4 121 284 3 186 1.03e-27 106
Msa0975440 MtrunA17_Chr7g0231631 30.682 264 169 6 31 286 2 259 1.14e-27 108
Msa0975440 MtrunA17_Chr8g0361411 31.660 259 160 9 38 286 202 453 1.36e-27 111
Msa0975440 MtrunA17_Chr5g0431431 31.600 250 150 7 5 252 123 353 1.76e-27 109
Msa0975440 MtrunA17_Chr8g0336251 36.782 174 105 3 92 260 266 439 3.86e-27 110
Msa0975440 MtrunA17_Chr2g0278721 37.931 174 99 5 97 264 785 955 4.98e-27 110
Msa0975440 MtrunA17_Chr2g0278721 32.022 178 112 4 92 263 269 443 1.40e-21 94.7
Msa0975440 MtrunA17_Chr3g0092031 33.526 173 106 4 97 263 6 175 3.66e-26 102
Msa0975440 MtrunA17_Chr6g0482061 27.241 290 180 8 15 285 201 478 9.44e-25 103
Msa0975440 MtrunA17_Chr6g0454381 54.430 79 36 0 1 79 64 142 8.33e-24 94.4
Msa0975440 MtrunA17_Chr6g0466831 31.034 232 145 7 39 263 218 441 1.71e-23 99.8
Msa0975440 MtrunA17_Chr8g0337381 39.535 129 68 3 165 289 2 124 3.04e-23 92.8
Msa0975440 MtrunA17_Chr4g0069611 34.857 175 101 5 97 263 269 438 3.38e-23 99.0
Msa0975440 MtrunA17_Chr7g0232351 32.995 197 93 7 33 204 196 378 4.53e-23 97.4
Msa0975440 MtrunA17_Chr4g0066141 37.500 136 71 2 165 286 216 351 2.28e-22 95.5
Msa0975440 MtrunA17_Chr6g0466841 30.043 233 146 8 39 263 218 441 2.64e-22 96.3
Msa0975440 MtrunA17_Chr8g0357361 36.879 141 80 3 93 229 116 251 1.37e-21 91.7
Msa0975440 MtrunA17_Chr8g0367221 33.146 178 104 5 96 262 1057 1230 6.13e-21 93.2
Msa0975440 MtrunA17_Chr8g0367221 31.461 178 107 5 96 262 270 443 1.40e-20 92.0
Msa0975440 MtrunA17_Chr8g0367221 31.609 174 110 4 97 262 1548 1720 6.70e-20 90.1
Msa0975440 MtrunA17_Chr2g0302851 32.022 178 112 4 92 263 265 439 7.15e-21 92.0
Msa0975440 MtrunA17_Chr1g0196851 27.843 255 153 10 27 263 235 476 7.88e-21 92.0
Msa0975440 MtrunA17_Chr4g0039881 30.899 178 114 4 92 263 241 415 2.86e-20 90.1
Msa0975440 MtrunA17_Chr6g0464091 28.085 235 146 7 40 263 226 448 1.13e-19 88.6
Msa0975440 MtrunA17_Chr6g0454241 90.244 41 4 0 246 286 1 41 1.24e-19 81.3
Msa0975440 MtrunA17_Chr4g0040691 28.839 267 161 10 38 291 212 462 1.45e-19 88.2
Msa0975440 MtrunA17_Chr2g0278741 30.899 178 114 4 92 263 351 525 1.90e-19 88.2
Msa0975440 MtrunA17_Chr4g0040711 28.704 216 136 6 38 246 212 416 8.06e-18 83.2
Msa0975440 MtrunA17_Chr2g0283041 26.957 230 141 8 38 255 211 425 1.10e-17 82.8
Msa0975440 MtrunA17_Chr4g0029131 28.902 173 110 5 97 256 257 429 3.09e-16 79.0
Msa0975440 MtrunA17_Chr7g0243731 39.474 76 45 1 161 235 4 79 4.54e-15 68.9
Msa0975440 MtrunA17_Chr4g0029151 27.746 173 112 5 97 256 265 437 2.82e-14 72.8
Msa0975440 MtrunA17_Chr2g0319751 27.542 236 147 8 38 262 689 911 1.87e-13 70.9
Msa0975440 MtrunA17_Chr2g0319761 27.311 238 147 9 38 263 212 435 4.03e-13 69.3
Msa0975440 MtrunA17_Chr2g0319791 29.348 184 116 6 91 262 253 434 6.28e-13 68.6
Msa0975440 MtrunA17_Chr7g0250021 29.787 141 87 3 7 141 176 310 6.87e-13 68.2
Msa0975440 MtrunA17_Chr2g0319731 31.034 145 93 4 91 230 270 412 1.44e-12 67.8
Msa0975440 MtrunA17_Chr8g0336271 54.545 55 25 0 1 55 190 244 3.86e-12 65.5
Msa0975440 MtrunA17_Chr2g0319801 31.250 144 92 4 91 229 253 394 5.90e-12 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0975440 AT1G22380.1 52.218 293 137 2 1 290 192 484 5.24e-113 335
Msa0975440 AT1G22400.1 50.853 293 141 2 1 290 193 485 7.55e-112 332
Msa0975440 AT1G22340.1 52.218 293 136 3 1 289 192 484 3.10e-109 325
Msa0975440 AT1G22360.1 51.536 293 139 2 1 290 189 481 1.83e-108 323
Msa0975440 AT1G78270.1 50.859 291 139 3 1 287 191 481 3.51e-106 318
Msa0975440 AT1G22370.1 51.536 293 139 2 1 290 17 309 8.50e-106 310
Msa0975440 AT1G22370.2 51.536 293 139 2 1 290 187 479 2.03e-103 310
Msa0975440 AT1G22360.2 49.147 293 134 3 1 290 189 469 8.61e-100 301
Msa0975440 AT5G59590.1 39.024 287 158 6 1 283 173 446 1.49e-65 212
Msa0975440 AT5G59580.1 38.328 287 160 6 1 283 171 444 9.09e-64 207
Msa0975440 AT3G46660.1 37.676 284 161 5 4 283 181 452 5.50e-61 200
Msa0975440 AT3G11340.1 38.676 287 163 5 4 287 169 445 5.50e-61 200
Msa0975440 AT3G46680.1 38.676 287 159 6 1 283 173 446 8.92e-61 199
Msa0975440 AT5G05880.1 36.396 283 162 5 11 286 177 448 1.04e-60 199
Msa0975440 AT3G46670.1 41.036 251 134 4 37 283 205 445 4.66e-60 197
Msa0975440 AT5G38010.1 37.282 287 165 6 1 284 177 451 9.14e-60 197
Msa0975440 AT5G38040.1 36.749 283 164 6 5 284 177 447 2.35e-58 193
Msa0975440 AT3G46690.1 37.716 289 162 6 1 284 172 447 2.49e-58 193
Msa0975440 AT5G05860.1 37.868 272 155 4 20 288 189 449 3.42e-58 193
Msa0975440 AT3G46700.1 38.431 255 142 4 37 286 200 444 7.16e-58 192
Msa0975440 AT5G05900.1 35.461 282 160 6 11 286 182 447 8.01e-57 189
Msa0975440 AT5G05890.1 35.000 280 170 4 11 286 181 452 2.17e-55 186
Msa0975440 AT3G46650.1 35.943 281 165 6 4 281 159 427 5.11e-55 184
Msa0975440 AT3G46720.1 41.827 208 116 1 76 283 235 437 5.38e-55 184
Msa0975440 AT2G28080.1 37.847 288 163 7 7 289 198 474 4.70e-54 183
Msa0975440 AT3G21560.1 32.082 293 188 4 1 286 184 472 2.56e-53 181
Msa0975440 AT5G05870.1 34.965 286 176 4 4 286 176 454 2.63e-53 180
Msa0975440 AT3G55700.1 36.897 290 162 10 4 287 177 451 9.87e-53 179
Msa0975440 AT4G15500.1 33.681 288 177 4 8 287 182 463 1.20e-52 179
Msa0975440 AT1G05680.1 36.823 277 158 6 8 275 173 441 4.67e-52 177
Msa0975440 AT2G36970.1 34.602 289 168 7 7 286 194 470 5.99e-52 177
Msa0975440 AT4G15490.1 32.082 293 183 5 8 290 184 470 3.21e-51 175
Msa0975440 AT4G15480.1 33.218 289 177 6 8 286 196 478 8.69e-51 174
Msa0975440 AT1G05675.1 35.439 285 167 6 8 283 173 449 1.13e-50 173
Msa0975440 AT2G26480.1 32.414 290 182 6 4 289 169 448 3.56e-49 169
Msa0975440 AT2G31750.1 34.459 296 179 7 1 287 166 455 3.77e-49 169
Msa0975440 AT2G31750.2 34.459 296 179 7 1 287 166 455 5.49e-49 169
Msa0975440 AT3G55710.1 36.426 291 168 9 4 287 175 455 2.46e-48 167
Msa0975440 AT4G01070.1 35.316 269 144 5 17 265 188 446 3.52e-48 167
Msa0975440 AT2G31790.1 33.684 285 175 6 8 283 174 453 5.16e-46 161
Msa0975440 AT1G01420.1 32.986 288 158 8 17 282 188 462 1.69e-45 160
Msa0975440 AT1G01420.2 32.986 288 158 8 17 282 191 465 1.91e-45 160
Msa0975440 AT3G50740.1 32.558 301 156 9 17 285 187 472 1.99e-45 160
Msa0975440 AT2G15480.1 40.000 235 123 6 65 286 251 480 3.11e-45 159
Msa0975440 AT4G34131.1 33.550 307 169 8 4 285 182 478 4.39e-45 159
Msa0975440 AT5G66690.1 31.615 291 156 8 24 285 190 466 2.97e-44 157
Msa0975440 AT5G17040.2 30.796 289 186 5 1 287 62 338 7.29e-44 152
Msa0975440 AT5G17050.1 32.526 289 179 5 1 287 183 457 7.33e-44 155
Msa0975440 AT5G26310.1 29.032 310 176 8 5 285 172 466 8.39e-44 155
Msa0975440 AT3G53160.1 34.579 321 172 11 4 292 175 489 1.98e-43 155
Msa0975440 AT5G17040.1 31.488 289 184 6 1 287 164 440 3.60e-43 153
Msa0975440 AT2G15490.3 37.931 232 132 4 65 286 248 477 3.73e-43 154
Msa0975440 AT2G15490.1 37.447 235 132 4 65 286 248 480 6.18e-43 153
Msa0975440 AT3G16520.3 33.564 289 166 9 8 284 183 457 1.03e-42 152
Msa0975440 AT2G15480.2 37.959 245 124 7 65 286 251 490 1.21e-42 153
Msa0975440 AT3G16520.2 34.686 271 151 9 8 266 183 439 5.61e-42 150
Msa0975440 AT3G16520.1 34.686 271 151 9 8 266 183 439 6.36e-42 150
Msa0975440 AT5G17030.1 31.488 289 184 6 1 287 180 456 6.42e-42 150
Msa0975440 AT4G36770.1 40.104 192 97 3 94 267 253 444 1.68e-41 149
Msa0975440 AT2G36770.1 30.573 314 183 9 4 287 181 489 3.55e-41 149
Msa0975440 AT1G01390.1 33.557 298 167 8 11 289 181 466 4.06e-41 148
Msa0975440 AT1G01390.2 33.557 298 167 8 11 289 198 483 4.70e-41 149
Msa0975440 AT1G30530.1 29.514 288 189 3 1 287 177 451 6.59e-41 147
Msa0975440 AT2G36780.1 33.457 269 158 7 38 287 223 489 1.54e-40 147
Msa0975440 AT2G16890.2 32.867 286 162 10 16 286 197 467 3.10e-40 146
Msa0975440 AT2G43840.2 30.169 295 190 7 4 289 162 449 3.44e-40 145
Msa0975440 AT5G14860.1 32.632 285 161 8 17 286 207 475 6.95e-40 145
Msa0975440 AT4G34138.1 32.188 320 169 11 4 292 182 484 8.76e-40 145
Msa0975440 AT1G05560.1 29.393 313 173 9 1 286 160 451 1.36e-39 144
Msa0975440 AT2G23260.1 29.310 290 193 5 4 286 169 453 2.03e-39 143
Msa0975440 AT2G43820.1 30.928 291 183 8 6 286 164 446 2.11e-39 143
Msa0975440 AT1G05560.2 29.393 313 173 9 1 286 210 501 2.25e-39 144
Msa0975440 AT2G23250.1 32.677 254 157 5 39 286 190 435 2.45e-39 143
Msa0975440 AT2G43840.1 29.831 295 191 7 4 289 162 449 4.71e-39 142
Msa0975440 AT2G36760.1 31.868 273 157 8 38 287 223 489 6.65e-39 143
Msa0975440 AT1G10400.1 32.414 290 169 9 6 285 189 461 6.95e-39 142
Msa0975440 AT2G29710.1 29.492 295 177 8 7 287 186 463 1.21e-38 142
Msa0975440 AT2G30140.2 31.395 258 151 6 38 286 210 450 1.30e-38 141
Msa0975440 AT2G30140.1 31.395 258 151 6 38 286 211 451 1.38e-38 141
Msa0975440 AT2G36750.1 31.310 313 181 9 4 287 177 484 2.60e-38 141
Msa0975440 AT2G36800.1 32.390 318 173 11 4 287 179 488 3.26e-38 141
Msa0975440 AT2G29730.1 29.066 289 181 8 9 287 189 463 4.85e-38 140
Msa0975440 AT2G30150.1 30.943 265 157 6 31 286 189 436 1.94e-37 138
Msa0975440 AT2G36790.1 33.648 318 168 11 4 287 180 488 2.25e-37 139
Msa0975440 AT2G30150.2 30.943 265 157 6 31 286 205 452 2.60e-37 138
Msa0975440 AT3G21790.1 33.696 276 143 6 38 286 216 478 8.88e-37 137
Msa0975440 AT4G34135.1 29.900 301 189 6 4 285 183 480 1.64e-36 136
Msa0975440 AT3G02100.1 32.714 269 153 7 21 283 210 456 2.24e-36 135
Msa0975440 AT2G18560.1 37.019 208 102 7 95 279 168 369 2.57e-36 134
Msa0975440 AT4G15550.1 28.904 301 173 9 6 285 192 472 4.01e-36 135
Msa0975440 AT1G07250.1 30.389 283 172 6 19 287 202 473 8.54e-36 134
Msa0975440 AT5G03490.1 31.496 254 150 7 40 285 224 461 1.78e-35 133
Msa0975440 AT5G37950.2 36.893 206 117 5 1 204 143 337 3.06e-35 130
Msa0975440 AT1G05530.1 28.713 303 193 7 1 287 160 455 3.46e-35 132
Msa0975440 AT5G37950.1 36.893 206 117 5 1 204 149 343 4.60e-35 130
Msa0975440 AT4G14090.1 31.488 289 173 9 8 285 180 454 5.12e-35 132
Msa0975440 AT1G73880.1 34.804 204 119 5 93 287 269 467 1.67e-34 130
Msa0975440 AT4G15280.1 30.909 275 153 5 38 287 212 474 2.38e-34 130
Msa0975440 AT4G15260.1 29.032 310 180 8 2 287 62 355 2.71e-34 128
Msa0975440 AT4G15280.2 30.909 275 153 5 38 287 244 506 3.03e-34 130
Msa0975440 AT3G22250.1 34.615 208 120 6 60 259 242 441 4.15e-34 129
Msa0975440 AT3G53150.1 30.000 280 166 6 38 287 231 510 6.38e-34 129
Msa0975440 AT3G21780.1 30.070 286 165 6 25 286 194 468 1.45e-33 128
Msa0975440 AT2G29740.1 29.259 270 167 6 27 283 213 471 1.56e-33 128
Msa0975440 AT3G21750.1 29.066 289 162 6 29 287 194 469 2.97e-33 127
Msa0975440 AT1G24100.1 33.190 232 138 5 65 286 234 458 3.53e-33 127
Msa0975440 AT2G18570.1 35.294 204 111 6 95 279 258 459 1.21e-32 125
Msa0975440 AT3G21760.1 28.369 282 167 5 30 286 209 480 1.83e-32 125
Msa0975440 AT3G21800.1 30.357 280 160 7 32 286 206 475 7.83e-32 123
Msa0975440 AT1G07260.1 28.629 248 158 4 50 287 234 472 8.56e-32 123
Msa0975440 AT2G16890.3 32.287 223 129 8 16 231 197 404 4.51e-30 117
Msa0975440 AT1G51210.1 30.508 236 128 7 40 261 219 432 1.90e-29 116
Msa0975440 AT2G29750.1 27.206 272 177 5 27 287 213 474 7.48e-29 115
Msa0975440 AT1G07240.1 27.941 272 171 7 32 287 214 476 9.04e-29 115
Msa0975440 AT5G12890.1 31.502 273 155 10 38 290 225 485 1.70e-28 114
Msa0975440 AT5G65550.1 35.227 176 103 5 96 264 269 440 4.31e-26 107
Msa0975440 AT5G49690.1 33.908 174 98 5 97 262 267 431 4.49e-26 107
Msa0975440 AT1G06000.1 30.112 269 160 9 38 288 177 435 1.08e-25 105
Msa0975440 AT2G22590.1 35.057 174 104 4 97 262 274 446 8.41e-20 89.4
Msa0975440 AT4G27570.1 31.655 139 89 3 95 229 248 384 3.22e-18 84.7
Msa0975440 AT4G27560.1 30.935 139 90 3 95 229 248 384 4.53e-17 81.3
Msa0975440 AT4G09500.1 32.117 137 87 3 97 229 219 353 1.98e-16 79.3
Msa0975440 AT4G09500.2 32.117 137 87 3 97 229 244 378 2.14e-16 79.3
Msa0975440 AT3G29630.1 32.653 147 89 4 96 238 245 385 3.45e-16 79.0
Msa0975440 AT3G29630.2 32.653 147 89 4 96 238 219 359 3.49e-16 78.6
Msa0975440 AT2G22930.1 32.117 137 87 3 97 229 244 378 5.37e-16 78.2
Msa0975440 AT1G64910.1 31.387 137 88 3 97 229 244 378 2.22e-15 76.3
Msa0975440 AT5G53990.1 29.927 137 90 3 97 229 244 378 2.63e-15 76.3
Msa0975440 AT5G54010.1 29.487 156 100 4 97 248 250 399 3.21e-15 75.9
Msa0975440 AT4G01070.2 30.822 146 88 2 17 159 188 323 3.29e-14 72.4
Msa0975440 AT5G54060.1 32.768 177 106 6 91 256 262 436 8.74e-14 71.6
Msa0975440 AT1G50580.1 25.510 196 129 5 76 260 230 419 1.70e-13 70.9
Msa0975440 AT4G34135.2 30.822 146 91 3 4 141 183 326 1.25e-12 67.8
Msa0975440 AT1G64920.1 28.369 141 91 4 97 229 244 382 6.72e-11 63.2

Find 73 sgRNAs with CRISPR-Local

Find 174 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGGCCAATAGCACAAATATT+AGG 0.156458 6_4:+9227310 None:intergenic
CATCTTTAAGTACAAATCTT+TGG 0.236383 6_4:-9227246 Msa0975440:CDS
TCCGTTGTTTATGTGAATTT+TGG 0.238962 6_4:-9227175 Msa0975440:CDS
TTCCCTAATATTTGTGCTAT+TGG 0.262532 6_4:-9227313 Msa0975440:CDS
AGGATTTGCCCGACTTTATA+AGG 0.271314 6_4:-9227468 Msa0975440:CDS
ATTTGCAATGAATGGGAGAT+TGG 0.344403 6_4:-9226833 Msa0975440:CDS
ATCGTAGAATTTATCATTGA+AGG 0.352263 6_4:-9227424 Msa0975440:CDS
GCCCGACTTTATAAGGATTA+CGG 0.355198 6_4:-9227461 Msa0975440:CDS
ATTAGAGTTTGCTTGGGGTT+TGG 0.376179 6_4:-9227122 Msa0975440:CDS
ATGTTGTGTTGGCCATTCTT+TGG 0.384970 6_4:-9226881 Msa0975440:CDS
GGCCAATAGCACAAATATTA+GGG 0.385967 6_4:+9227311 None:intergenic
GTAGATTTATTTGCAATGAA+TGG 0.392511 6_4:-9226841 Msa0975440:CDS
CTTAGGCCTGATCTTGTCAT+TGG 0.397286 6_4:-9227070 Msa0975440:CDS
AAAACTATTAGAGTTTGCTT+GGG 0.398810 6_4:-9227128 Msa0975440:CDS
AAGAATGAAATTTCAGATAG+AGG 0.408729 6_4:-9227019 Msa0975440:CDS
AATTCTACGATCGAATCATT+TGG 0.410815 6_4:+9227436 None:intergenic
TAGATTTATTTGCAATGAAT+GGG 0.416950 6_4:-9226840 Msa0975440:CDS
AAGATACCAAGTGTCTTGAT+TGG 0.419804 6_4:-9227219 Msa0975440:CDS
GTATTGAACCATCCTTCAAT+TGG 0.448564 6_4:-9226965 Msa0975440:CDS
GGTTCAATACTTGCTCTTGT+GGG 0.457586 6_4:+9226978 None:intergenic
CAGAGATGAGGTGGAGAAGT+TGG 0.458489 6_4:-9226786 Msa0975440:CDS
TCTTGATTGGCTTGAATCAA+AGG 0.471398 6_4:-9227206 Msa0975440:CDS
GAACCGCCAATGACAAGATC+AGG 0.472867 6_4:+9227064 None:intergenic
GAATTGATGGTGGGAGAGAA+AGG 0.475632 6_4:-9226758 Msa0975440:CDS
AGGCCTGATCTTGTCATTGG+CGG 0.477893 6_4:-9227067 Msa0975440:CDS
TTTGCAATGAATGGGAGATT+GGG 0.479301 6_4:-9226832 Msa0975440:CDS
GTCAAGAATCCACCAATTGA+AGG 0.479366 6_4:+9226953 None:intergenic
TCTTGTCATTGGCGGTTCCA+TGG 0.479634 6_4:-9227059 Msa0975440:CDS
TCCGTAATCCTTATAAAGTC+GGG 0.492836 6_4:+9227460 None:intergenic
TTGAACCATCCTTCAATTGG+TGG 0.493739 6_4:-9226962 Msa0975440:CDS
GAAGTTGGTCAATGAATTGA+TGG 0.500986 6_4:-9226771 Msa0975440:CDS
GTTGTCTGATCACCAAAGAA+TGG 0.501643 6_4:+9226869 None:intergenic
GTGGGCACCAACCCGCGATT+AGG 0.503563 6_4:+9226996 None:intergenic
TGGTTCAATACTTGCTCTTG+TGG 0.517078 6_4:+9226977 None:intergenic
GAATTTATCATTGAAGGCAC+AGG 0.519340 6_4:-9227418 Msa0975440:CDS
TACTTCTGATGAACTTGAGA+AGG 0.523156 6_4:-9227362 Msa0975440:CDS
ATTGCAGAACTTTCGACTGA+AGG 0.525666 6_4:-9227488 Msa0975440:intron
GATAATTGAGATGAAGAAGA+AGG 0.531263 6_4:-9226717 Msa0975440:CDS
CTGGAGTGCCAATGTTGTGT+TGG 0.543796 6_4:-9226892 Msa0975440:CDS
ATCCGTAATCCTTATAAAGT+CGG 0.544773 6_4:+9227459 None:intergenic
GCCGAGGAGGACACGAGACC+TGG 0.545740 6_4:-9226695 Msa0975440:CDS
ACCAGGTCTCGTGTCCTCCT+CGG 0.547642 6_4:+9226694 None:intergenic
ACAACTGAAAGCATATGTGC+TGG 0.554534 6_4:-9226911 Msa0975440:CDS
TTCAAGCCAATCAAGACACT+TGG 0.557095 6_4:+9227213 None:intergenic
TTGTACTTAAAGATGCTAAG+TGG 0.558301 6_4:+9227254 None:intergenic
CAATGACAAGATCAGGCCTA+AGG 0.563385 6_4:+9227071 None:intergenic
TCAGATAGAGGCCTAATCGC+GGG 0.564559 6_4:-9227007 Msa0975440:CDS
GAGAGAAAGGAAAGAAGATG+AGG 0.567553 6_4:-9226745 Msa0975440:CDS
GATTCTTGACTCATTGTGGA+TGG 0.573721 6_4:-9226940 Msa0975440:CDS
CAATGAATGGGAGATTGGGA+TGG 0.579933 6_4:-9226828 Msa0975440:CDS
CACCTCATCTCTGTTCACAT+TGG 0.585032 6_4:+9226796 None:intergenic
TGGTTGTTCATACATGAACT+TGG 0.585259 6_4:-9226672 Msa0975440:CDS
TTCACATAAACAACGGACCT+CGG 0.589766 6_4:+9227181 None:intergenic
GGTGGATTCTTGACTCATTG+TGG 0.591311 6_4:-9226944 Msa0975440:CDS
AAGAATGGCCAACACAACAT+TGG 0.591327 6_4:+9226884 None:intergenic
TATCATTGAAGGCACAGGAA+GGG 0.601331 6_4:-9227413 Msa0975440:CDS
TGAGATGAAGAAGAAGGCCG+AGG 0.601491 6_4:-9226711 Msa0975440:CDS
AGAATCCACCAATTGAAGGA+TGG 0.606785 6_4:+9226957 None:intergenic
TTCAGATAGAGGCCTAATCG+CGG 0.614526 6_4:-9227008 Msa0975440:CDS
AAACTATTAGAGTTTGCTTG+GGG 0.622826 6_4:-9227127 Msa0975440:CDS
GTTGGTCAATGAATTGATGG+TGG 0.628703 6_4:-9226768 Msa0975440:CDS
TTCATGTATGAACAACCACC+AGG 0.629091 6_4:+9226677 None:intergenic
CCCAAAATTCACATAAACAA+CGG 0.630077 6_4:+9227174 None:intergenic
TTATCATTGAAGGCACAGGA+AGG 0.630574 6_4:-9227414 Msa0975440:CDS
CAATGTGAACAGAGATGAGG+TGG 0.635907 6_4:-9226795 Msa0975440:CDS
AAACTCAGATGACAAAACCA+TGG 0.644316 6_4:+9227042 None:intergenic
ATAGAGGCCTAATCGCGGGT+TGG 0.645679 6_4:-9227003 Msa0975440:CDS
TTGGTCAATGAATTGATGGT+GGG 0.653223 6_4:-9226767 Msa0975440:CDS
GATGAAGAAGAAGGCCGAGG+AGG 0.660350 6_4:-9226708 Msa0975440:CDS
GGCTTGAATCAAAGGAACCG+AGG 0.679964 6_4:-9227198 Msa0975440:CDS
ACAAATATTAGGGAACGTAG+TGG 0.693539 6_4:+9227321 None:intergenic
GAGGAGGACACGAGACCTGG+TGG 0.694761 6_4:-9226692 Msa0975440:CDS
CGCCAATGTGAACAGAGATG+AGG 0.705179 6_4:-9226798 Msa0975440:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GATTTAAAAATGATGATAAA+GGG + chr6_4:9226884-9226903 None:intergenic 15.0%
!! TGATTTAAAAATGATGATAA+AGG + chr6_4:9226885-9226904 None:intergenic 15.0%
!! GATTTAAAAATGATGATAAA+GGG + chr6_4:9226884-9226903 None:intergenic 15.0%
!! TGATTTAAAAATGATGATAA+AGG + chr6_4:9226885-9226904 None:intergenic 15.0%
!! TAGATTTATTTGCAATGAAT+GGG - chr6_4:9227331-9227350 Msa0975440:CDS 20.0%
!! TAGATTTATTTGCAATGAAT+GGG - chr6_4:9227331-9227350 Msa0975440:CDS 20.0%
! ATCGTAGAATTTATCATTGA+AGG - chr6_4:9226747-9226766 Msa0975440:CDS 25.0%
! CATCTTTAAGTACAAATCTT+TGG - chr6_4:9226925-9226944 Msa0975440:CDS 25.0%
!! AAAAACTATTAGAGTTTGCT+TGG - chr6_4:9227042-9227061 Msa0975440:CDS 25.0%
!! AAAACTATTAGAGTTTGCTT+GGG - chr6_4:9227043-9227062 Msa0975440:CDS 25.0%
!!! TAAAAAATGTTGCTTGCTAT+TGG + chr6_4:9227075-9227094 None:intergenic 25.0%
!!! ATAGCAAGCAACATTTTTTA+TGG - chr6_4:9227075-9227094 Msa0975440:CDS 25.0%
!!! AACATTTTTTATGGATCCTT+AGG - chr6_4:9227084-9227103 Msa0975440:CDS 25.0%
! AAGAATGAAATTTCAGATAG+AGG - chr6_4:9227152-9227171 Msa0975440:CDS 25.0%
! GTAGATTTATTTGCAATGAA+TGG - chr6_4:9227330-9227349 Msa0975440:CDS 25.0%
! ATCGTAGAATTTATCATTGA+AGG - chr6_4:9226747-9226766 Msa0975440:CDS 25.0%
! CATCTTTAAGTACAAATCTT+TGG - chr6_4:9226925-9226944 Msa0975440:CDS 25.0%
!! AAAAACTATTAGAGTTTGCT+TGG - chr6_4:9227042-9227061 Msa0975440:CDS 25.0%
!! AAAACTATTAGAGTTTGCTT+GGG - chr6_4:9227043-9227062 Msa0975440:CDS 25.0%
!!! TAAAAAATGTTGCTTGCTAT+TGG + chr6_4:9227075-9227094 None:intergenic 25.0%
!!! ATAGCAAGCAACATTTTTTA+TGG - chr6_4:9227075-9227094 Msa0975440:CDS 25.0%
!!! AACATTTTTTATGGATCCTT+AGG - chr6_4:9227084-9227103 Msa0975440:CDS 25.0%
! AAGAATGAAATTTCAGATAG+AGG - chr6_4:9227152-9227171 Msa0975440:CDS 25.0%
! GTAGATTTATTTGCAATGAA+TGG - chr6_4:9227330-9227349 Msa0975440:CDS 25.0%
TTATCTGTCAAACGGATATT+TGG - chr6_4:9226635-9226654 Msa0975440:CDS 30.0%
ATCCGTAATCCTTATAAAGT+CGG + chr6_4:9226715-9226734 None:intergenic 30.0%
AATTCTACGATCGAATCATT+TGG + chr6_4:9226738-9226757 None:intergenic 30.0%
TTCCCTAATATTTGTGCTAT+TGG - chr6_4:9226858-9226877 Msa0975440:CDS 30.0%
TTGTACTTAAAGATGCTAAG+TGG + chr6_4:9226920-9226939 None:intergenic 30.0%
! TCCGTTGTTTATGTGAATTT+TGG - chr6_4:9226996-9227015 Msa0975440:CDS 30.0%
CCCAAAATTCACATAAACAA+CGG + chr6_4:9227000-9227019 None:intergenic 30.0%
! CCGTTGTTTATGTGAATTTT+GGG - chr6_4:9226997-9227016 Msa0975440:CDS 30.0%
! AAACTATTAGAGTTTGCTTG+GGG - chr6_4:9227044-9227063 Msa0975440:CDS 30.0%
GATAATTGAGATGAAGAAGA+AGG - chr6_4:9227454-9227473 Msa0975440:CDS 30.0%
GAACTTGGAAAAAGTGATTA+AGG - chr6_4:9227514-9227533 Msa0975440:intron 30.0%
TTATCTGTCAAACGGATATT+TGG - chr6_4:9226635-9226654 Msa0975440:CDS 30.0%
ATCCGTAATCCTTATAAAGT+CGG + chr6_4:9226715-9226734 None:intergenic 30.0%
AATTCTACGATCGAATCATT+TGG + chr6_4:9226738-9226757 None:intergenic 30.0%
TTCCCTAATATTTGTGCTAT+TGG - chr6_4:9226858-9226877 Msa0975440:CDS 30.0%
TTGTACTTAAAGATGCTAAG+TGG + chr6_4:9226920-9226939 None:intergenic 30.0%
! TCCGTTGTTTATGTGAATTT+TGG - chr6_4:9226996-9227015 Msa0975440:CDS 30.0%
CCCAAAATTCACATAAACAA+CGG + chr6_4:9227000-9227019 None:intergenic 30.0%
! CCGTTGTTTATGTGAATTTT+GGG - chr6_4:9226997-9227016 Msa0975440:CDS 30.0%
! AAACTATTAGAGTTTGCTTG+GGG - chr6_4:9227044-9227063 Msa0975440:CDS 30.0%
GATAATTGAGATGAAGAAGA+AGG - chr6_4:9227454-9227473 Msa0975440:CDS 30.0%
GAACTTGGAAAAAGTGATTA+AGG - chr6_4:9227514-9227533 Msa0975440:intron 30.0%
TCCGTAATCCTTATAAAGTC+GGG + chr6_4:9226714-9226733 None:intergenic 35.0%
! GAATTTATCATTGAAGGCAC+AGG - chr6_4:9226753-9226772 Msa0975440:CDS 35.0%
TACTTCTGATGAACTTGAGA+AGG - chr6_4:9226809-9226828 Msa0975440:CDS 35.0%
ACAAATATTAGGGAACGTAG+TGG + chr6_4:9226853-9226872 None:intergenic 35.0%
GGCCAATAGCACAAATATTA+GGG + chr6_4:9226863-9226882 None:intergenic 35.0%
!! AAAGATGCTAAGTGGTTTTG+TGG + chr6_4:9226912-9226931 None:intergenic 35.0%
AAGATACCAAGTGTCTTGAT+TGG - chr6_4:9226952-9226971 Msa0975440:CDS 35.0%
!! TCTTGATTGGCTTGAATCAA+AGG - chr6_4:9226965-9226984 Msa0975440:CDS 35.0%
AAACTCAGATGACAAAACCA+TGG + chr6_4:9227132-9227151 None:intergenic 35.0%
GTATTGAACCATCCTTCAAT+TGG - chr6_4:9227206-9227225 Msa0975440:CDS 35.0%
ATTTGCAATGAATGGGAGAT+TGG - chr6_4:9227338-9227357 Msa0975440:CDS 35.0%
TTTGCAATGAATGGGAGATT+GGG - chr6_4:9227339-9227358 Msa0975440:CDS 35.0%
! GAAGTTGGTCAATGAATTGA+TGG - chr6_4:9227400-9227419 Msa0975440:CDS 35.0%
! TTGGTCAATGAATTGATGGT+GGG - chr6_4:9227404-9227423 Msa0975440:CDS 35.0%
TGGTTGTTCATACATGAACT+TGG - chr6_4:9227499-9227518 Msa0975440:intron 35.0%
CTTGGAAAAAGTGATTAAGG+AGG - chr6_4:9227517-9227536 Msa0975440:intron 35.0%
TCCGTAATCCTTATAAAGTC+GGG + chr6_4:9226714-9226733 None:intergenic 35.0%
! GAATTTATCATTGAAGGCAC+AGG - chr6_4:9226753-9226772 Msa0975440:CDS 35.0%
TACTTCTGATGAACTTGAGA+AGG - chr6_4:9226809-9226828 Msa0975440:CDS 35.0%
ACAAATATTAGGGAACGTAG+TGG + chr6_4:9226853-9226872 None:intergenic 35.0%
GGCCAATAGCACAAATATTA+GGG + chr6_4:9226863-9226882 None:intergenic 35.0%
!! AAAGATGCTAAGTGGTTTTG+TGG + chr6_4:9226912-9226931 None:intergenic 35.0%
AAGATACCAAGTGTCTTGAT+TGG - chr6_4:9226952-9226971 Msa0975440:CDS 35.0%
!! TCTTGATTGGCTTGAATCAA+AGG - chr6_4:9226965-9226984 Msa0975440:CDS 35.0%
AAACTCAGATGACAAAACCA+TGG + chr6_4:9227132-9227151 None:intergenic 35.0%
GTATTGAACCATCCTTCAAT+TGG - chr6_4:9227206-9227225 Msa0975440:CDS 35.0%
ATTTGCAATGAATGGGAGAT+TGG - chr6_4:9227338-9227357 Msa0975440:CDS 35.0%
TTTGCAATGAATGGGAGATT+GGG - chr6_4:9227339-9227358 Msa0975440:CDS 35.0%
! GAAGTTGGTCAATGAATTGA+TGG - chr6_4:9227400-9227419 Msa0975440:CDS 35.0%
! TTGGTCAATGAATTGATGGT+GGG - chr6_4:9227404-9227423 Msa0975440:CDS 35.0%
TGGTTGTTCATACATGAACT+TGG - chr6_4:9227499-9227518 Msa0975440:intron 35.0%
CTTGGAAAAAGTGATTAAGG+AGG - chr6_4:9227517-9227536 Msa0975440:intron 35.0%
CGGATATTTGGACACTAAAG+TGG - chr6_4:9226647-9226666 Msa0975440:CDS 40.0%
!! ACTAAAGTGGACTGTATTCC+AGG - chr6_4:9226660-9226679 Msa0975440:CDS 40.0%
ATTGCAGAACTTTCGACTGA+AGG - chr6_4:9226683-9226702 Msa0975440:CDS 40.0%
AGGATTTGCCCGACTTTATA+AGG - chr6_4:9226703-9226722 Msa0975440:CDS 40.0%
GCCCGACTTTATAAGGATTA+CGG - chr6_4:9226710-9226729 Msa0975440:CDS 40.0%
! TTATCATTGAAGGCACAGGA+AGG - chr6_4:9226757-9226776 Msa0975440:CDS 40.0%
! TATCATTGAAGGCACAGGAA+GGG - chr6_4:9226758-9226777 Msa0975440:CDS 40.0%
GGGCCAATAGCACAAATATT+AGG + chr6_4:9226864-9226883 None:intergenic 40.0%
TTCAAGCCAATCAAGACACT+TGG + chr6_4:9226961-9226980 None:intergenic 40.0%
TTCACATAAACAACGGACCT+CGG + chr6_4:9226993-9227012 None:intergenic 40.0%
! ATTAGAGTTTGCTTGGGGTT+TGG - chr6_4:9227049-9227068 Msa0975440:CDS 40.0%
GGTTCAATACTTGCTCTTGT+GGG + chr6_4:9227196-9227215 None:intergenic 40.0%
TGGTTCAATACTTGCTCTTG+TGG + chr6_4:9227197-9227216 None:intergenic 40.0%
TTGAACCATCCTTCAATTGG+TGG - chr6_4:9227209-9227228 Msa0975440:CDS 40.0%
AGAATCCACCAATTGAAGGA+TGG + chr6_4:9227217-9227236 None:intergenic 40.0%
GTCAAGAATCCACCAATTGA+AGG + chr6_4:9227221-9227240 None:intergenic 40.0%
GATTCTTGACTCATTGTGGA+TGG - chr6_4:9227231-9227250 Msa0975440:CDS 40.0%
! ACAACTGAAAGCATATGTGC+TGG - chr6_4:9227260-9227279 Msa0975440:CDS 40.0%
AAGAATGGCCAACACAACAT+TGG + chr6_4:9227290-9227309 None:intergenic 40.0%
! ATGTTGTGTTGGCCATTCTT+TGG - chr6_4:9227290-9227309 Msa0975440:CDS 40.0%
GTTGTCTGATCACCAAAGAA+TGG + chr6_4:9227305-9227324 None:intergenic 40.0%
GTTGGTCAATGAATTGATGG+TGG - chr6_4:9227403-9227422 Msa0975440:CDS 40.0%
GAGAGAAAGGAAAGAAGATG+AGG - chr6_4:9227426-9227445 Msa0975440:CDS 40.0%
TTCATGTATGAACAACCACC+AGG + chr6_4:9227497-9227516 None:intergenic 40.0%
CGGATATTTGGACACTAAAG+TGG - chr6_4:9226647-9226666 Msa0975440:CDS 40.0%
!! ACTAAAGTGGACTGTATTCC+AGG - chr6_4:9226660-9226679 Msa0975440:CDS 40.0%
ATTGCAGAACTTTCGACTGA+AGG - chr6_4:9226683-9226702 Msa0975440:CDS 40.0%
AGGATTTGCCCGACTTTATA+AGG - chr6_4:9226703-9226722 Msa0975440:CDS 40.0%
GCCCGACTTTATAAGGATTA+CGG - chr6_4:9226710-9226729 Msa0975440:CDS 40.0%
! TTATCATTGAAGGCACAGGA+AGG - chr6_4:9226757-9226776 Msa0975440:CDS 40.0%
! TATCATTGAAGGCACAGGAA+GGG - chr6_4:9226758-9226777 Msa0975440:CDS 40.0%
GGGCCAATAGCACAAATATT+AGG + chr6_4:9226864-9226883 None:intergenic 40.0%
TTCAAGCCAATCAAGACACT+TGG + chr6_4:9226961-9226980 None:intergenic 40.0%
TTCACATAAACAACGGACCT+CGG + chr6_4:9226993-9227012 None:intergenic 40.0%
! ATTAGAGTTTGCTTGGGGTT+TGG - chr6_4:9227049-9227068 Msa0975440:CDS 40.0%
GGTTCAATACTTGCTCTTGT+GGG + chr6_4:9227196-9227215 None:intergenic 40.0%
TGGTTCAATACTTGCTCTTG+TGG + chr6_4:9227197-9227216 None:intergenic 40.0%
TTGAACCATCCTTCAATTGG+TGG - chr6_4:9227209-9227228 Msa0975440:CDS 40.0%
AGAATCCACCAATTGAAGGA+TGG + chr6_4:9227217-9227236 None:intergenic 40.0%
GTCAAGAATCCACCAATTGA+AGG + chr6_4:9227221-9227240 None:intergenic 40.0%
GATTCTTGACTCATTGTGGA+TGG - chr6_4:9227231-9227250 Msa0975440:CDS 40.0%
! ACAACTGAAAGCATATGTGC+TGG - chr6_4:9227260-9227279 Msa0975440:CDS 40.0%
AAGAATGGCCAACACAACAT+TGG + chr6_4:9227290-9227309 None:intergenic 40.0%
! ATGTTGTGTTGGCCATTCTT+TGG - chr6_4:9227290-9227309 Msa0975440:CDS 40.0%
GTTGTCTGATCACCAAAGAA+TGG + chr6_4:9227305-9227324 None:intergenic 40.0%
GTTGGTCAATGAATTGATGG+TGG - chr6_4:9227403-9227422 Msa0975440:CDS 40.0%
GAGAGAAAGGAAAGAAGATG+AGG - chr6_4:9227426-9227445 Msa0975440:CDS 40.0%
TTCATGTATGAACAACCACC+AGG + chr6_4:9227497-9227516 None:intergenic 40.0%
AGTCGAAAGTTCTGCAATCC+TGG + chr6_4:9226681-9226700 None:intergenic 45.0%
CAATGACAAGATCAGGCCTA+AGG + chr6_4:9227103-9227122 None:intergenic 45.0%
CTTAGGCCTGATCTTGTCAT+TGG - chr6_4:9227101-9227120 Msa0975440:CDS 45.0%
TTCAGATAGAGGCCTAATCG+CGG - chr6_4:9227163-9227182 Msa0975440:CDS 45.0%
! GGTGGATTCTTGACTCATTG+TGG - chr6_4:9227227-9227246 Msa0975440:CDS 45.0%
CAATGAATGGGAGATTGGGA+TGG - chr6_4:9227343-9227362 Msa0975440:CDS 45.0%
CACCTCATCTCTGTTCACAT+TGG + chr6_4:9227378-9227397 None:intergenic 45.0%
CAATGTGAACAGAGATGAGG+TGG - chr6_4:9227376-9227395 Msa0975440:CDS 45.0%
!! GAATTGATGGTGGGAGAGAA+AGG - chr6_4:9227413-9227432 Msa0975440:CDS 45.0%
AGTCGAAAGTTCTGCAATCC+TGG + chr6_4:9226681-9226700 None:intergenic 45.0%
CAATGACAAGATCAGGCCTA+AGG + chr6_4:9227103-9227122 None:intergenic 45.0%
CTTAGGCCTGATCTTGTCAT+TGG - chr6_4:9227101-9227120 Msa0975440:CDS 45.0%
TTCAGATAGAGGCCTAATCG+CGG - chr6_4:9227163-9227182 Msa0975440:CDS 45.0%
! GGTGGATTCTTGACTCATTG+TGG - chr6_4:9227227-9227246 Msa0975440:CDS 45.0%
CAATGAATGGGAGATTGGGA+TGG - chr6_4:9227343-9227362 Msa0975440:CDS 45.0%
CACCTCATCTCTGTTCACAT+TGG + chr6_4:9227378-9227397 None:intergenic 45.0%
CAATGTGAACAGAGATGAGG+TGG - chr6_4:9227376-9227395 Msa0975440:CDS 45.0%
!! GAATTGATGGTGGGAGAGAA+AGG - chr6_4:9227413-9227432 Msa0975440:CDS 45.0%
GGCTTGAATCAAAGGAACCG+AGG - chr6_4:9226973-9226992 Msa0975440:CDS 50.0%
AGGCCTGATCTTGTCATTGG+CGG - chr6_4:9227104-9227123 Msa0975440:CDS 50.0%
GAACCGCCAATGACAAGATC+AGG + chr6_4:9227110-9227129 None:intergenic 50.0%
TCTTGTCATTGGCGGTTCCA+TGG - chr6_4:9227112-9227131 Msa0975440:CDS 50.0%
TCAGATAGAGGCCTAATCGC+GGG - chr6_4:9227164-9227183 Msa0975440:CDS 50.0%
! CTGGAGTGCCAATGTTGTGT+TGG - chr6_4:9227279-9227298 Msa0975440:CDS 50.0%
CGCCAATGTGAACAGAGATG+AGG - chr6_4:9227373-9227392 Msa0975440:CDS 50.0%
CAGAGATGAGGTGGAGAAGT+TGG - chr6_4:9227385-9227404 Msa0975440:CDS 50.0%
TGAGATGAAGAAGAAGGCCG+AGG - chr6_4:9227460-9227479 Msa0975440:CDS 50.0%
GGCTTGAATCAAAGGAACCG+AGG - chr6_4:9226973-9226992 Msa0975440:CDS 50.0%
AGGCCTGATCTTGTCATTGG+CGG - chr6_4:9227104-9227123 Msa0975440:CDS 50.0%
GAACCGCCAATGACAAGATC+AGG + chr6_4:9227110-9227129 None:intergenic 50.0%
TCTTGTCATTGGCGGTTCCA+TGG - chr6_4:9227112-9227131 Msa0975440:CDS 50.0%
TCAGATAGAGGCCTAATCGC+GGG - chr6_4:9227164-9227183 Msa0975440:CDS 50.0%
! CTGGAGTGCCAATGTTGTGT+TGG - chr6_4:9227279-9227298 Msa0975440:CDS 50.0%
CGCCAATGTGAACAGAGATG+AGG - chr6_4:9227373-9227392 Msa0975440:CDS 50.0%
CAGAGATGAGGTGGAGAAGT+TGG - chr6_4:9227385-9227404 Msa0975440:CDS 50.0%
TGAGATGAAGAAGAAGGCCG+AGG - chr6_4:9227460-9227479 Msa0975440:CDS 50.0%
ATAGAGGCCTAATCGCGGGT+TGG - chr6_4:9227168-9227187 Msa0975440:CDS 55.0%
GATGAAGAAGAAGGCCGAGG+AGG - chr6_4:9227463-9227482 Msa0975440:CDS 55.0%
ATAGAGGCCTAATCGCGGGT+TGG - chr6_4:9227168-9227187 Msa0975440:CDS 55.0%
GATGAAGAAGAAGGCCGAGG+AGG - chr6_4:9227463-9227482 Msa0975440:CDS 55.0%
ACCAGGTCTCGTGTCCTCCT+CGG + chr6_4:9227480-9227499 None:intergenic 60.0%
ACCAGGTCTCGTGTCCTCCT+CGG + chr6_4:9227480-9227499 None:intergenic 60.0%
GTGGGCACCAACCCGCGATT+AGG + chr6_4:9227178-9227197 None:intergenic 65.0%
GAGGAGGACACGAGACCTGG+TGG - chr6_4:9227479-9227498 Msa0975440:CDS 65.0%
GTGGGCACCAACCCGCGATT+AGG + chr6_4:9227178-9227197 None:intergenic 65.0%
GAGGAGGACACGAGACCTGG+TGG - chr6_4:9227479-9227498 Msa0975440:CDS 65.0%
GCCGAGGAGGACACGAGACC+TGG - chr6_4:9227476-9227495 Msa0975440:CDS 70.0%
GCCGAGGAGGACACGAGACC+TGG - chr6_4:9227476-9227495 Msa0975440:CDS 70.0%
Chromosome Type Strat End Strand Name
chr6_4 gene 9226628 9227565 9226628 ID=Msa0975440;Name=Msa0975440
chr6_4 mRNA 9226628 9227565 9226628 ID=Msa0975440-mRNA-1;Parent=Msa0975440;Name=Msa0975440-mRNA-1;_AED=0.42;_eAED=0.42;_QI=0|0|0|1|1|1|2|0|293
chr6_4 exon 9227560 9227565 9227560 ID=Msa0975440-mRNA-1:exon:3302;Parent=Msa0975440-mRNA-1
chr6_4 exon 9226628 9227503 9226628 ID=Msa0975440-mRNA-1:exon:3301;Parent=Msa0975440-mRNA-1
chr6_4 CDS 9227560 9227565 9227560 ID=Msa0975440-mRNA-1:cds;Parent=Msa0975440-mRNA-1
chr6_4 CDS 9226628 9227503 9226628 ID=Msa0975440-mRNA-1:cds;Parent=Msa0975440-mRNA-1
Gene Sequence

>Msa0975440

ATGAGAAACTTTCGACTGAAGGATTTGCCCGACTTTATAAGGATTACGGATCCAAATGATTCGATCGTAGAATTTATCATTGAAGGCACAGGAAGGGTTCAAAGAGACTCTGCTCTTATTTTTAATACTTCTGATGAACTTGAGAAGGATGTAATCAATGTTCTCTCCACTACGTTCCCTAATATTTGTGCTATTGGCCCTTTATCATCATTTTTAAATCAAAGTCCACAAAACCACTTAGCATCTTTAAGTACAAATCTTTGGAAAGAAGATACCAAGTGTCTTGATTGGCTTGAATCAAAGGAACCGAGGTCCGTTGTTTATGTGAATTTTGGGAGCTCAACAGTTATGACTACAGAAAAACTATTAGAGTTTGCTTGGGGTTTGGCCAATAGCAAGCAACATTTTTTATGGATCCTTAGGCCTGATCTTGTCATTGGCGGTTCCATGGTTTTGTCATCTGAGTTTAAGAATGAAATTTCAGATAGAGGCCTAATCGCGGGTTGGTGCCCACAAGAGCAAGTATTGAACCATCCTTCAATTGGTGGATTCTTGACTCATTGTGGATGGAACTCAACAACTGAAAGCATATGTGCTGGAGTGCCAATGTTGTGTTGGCCATTCTTTGGTGATCAGACAACAAACTGTAGATTTATTTGCAATGAATGGGAGATTGGGATGGAAATTGACGCCAATGTGAACAGAGATGAGGTGGAGAAGTTGGTCAATGAATTGATGGTGGGAGAGAAAGGAAAGAAGATGAGGAAAAAGATAATTGAGATGAAGAAGAAGGCCGAGGAGGACACGAGACCTGGTGGTTGTTCATACATGAACTTGGAAAAAGTGATTAAGGAGGTTTTGCTAAAACAAAATCAAACCTAA
Protein sequence

>Msa0975440

MRNFRLKDLPDFIRITDPNDSIVEFIIEGTGRVQRDSALIFNTSDELEKDVINVLSTTFPNICAIGPLSSFLNQSPQNHLASLSTNLWKEDTKCLDWLESKEPRSVVYVNFGSSTVMTTEKLLEFAWGLANSKQHFLWILRPDLVIGGSMVLSSEFKNEISDRGLIAGWCPQEQVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFGDQTTNCRFICNEWEIGMEIDANVNRDEVEKLVNELMVGEKGKKMRKKIIEMKKKAEEDTRPGGCSYMNLEKVIKEVLLKQNQT*