AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0208710


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0208710 MtrunA17_Chr2g0307851 95.522 670 29 1 1 669 1 670 0.0 1237
Msa0208710 MtrunA17_Chr4g0061881 78.814 590 124 1 80 668 68 657 0.0 969
Msa0208710 MtrunA17_Chr4g0061841 52.412 311 64 5 154 464 8 234 7.02e-95 292
Msa0208710 MtrunA17_Chr4g0073611 49.196 311 112 6 155 460 2 271 3.34e-89 280
Msa0208710 MtrunA17_Chr5g0408331 43.750 368 117 6 82 448 34 312 4.91e-88 277
Msa0208710 MtrunA17_Chr5g0437391 44.974 378 118 12 201 571 6 300 4.36e-82 263
Msa0208710 MtrunA17_Chr4g0076561 63.636 209 40 2 349 557 14 186 1.52e-79 250
Msa0208710 MtrunA17_Chr4g0069071 39.687 383 198 11 141 512 11 371 1.94e-68 228
Msa0208710 MtrunA17_Chr8g0344851 62.778 180 56 5 430 606 1 172 2.42e-58 194
Msa0208710 MtrunA17_Chr4g0061831 85.437 103 15 0 492 594 9 111 1.14e-53 179
Msa0208710 MtrunA17_Chr4g0064001 51.724 203 72 6 455 645 4 192 2.51e-48 169
Msa0208710 MtrunA17_Chr4g0076571 69.072 97 30 0 151 247 2 98 2.51e-44 153
Msa0208710 MtrunA17_Chr8g0344821 64.815 108 36 1 496 603 5 110 6.34e-36 131
Msa0208710 MtrunA17_Chr5g0437441 56.190 105 40 3 107 208 1 102 1.69e-28 109
Msa0208710 MtrunA17_Chr8g0344831 51.181 127 49 2 325 451 5 118 1.28e-26 105
Msa0208710 MtrunA17_Chr4g0073621 75.758 66 14 1 544 607 1 66 2.40e-25 99.8
Msa0208710 MtrunA17_Chr5g0408341 60.494 81 32 0 549 629 1 81 9.12e-25 100
Msa0208710 MtrunA17_Chr5g0437451 82.353 51 9 0 546 596 98 148 1.24e-21 92.0
Msa0208710 MtrunA17_Chr4g0069081 50.000 86 43 0 525 610 2 87 5.99e-21 88.6
Msa0208710 MtrunA17_Chr4g0063991 57.143 84 24 2 347 430 2 73 1.09e-19 84.0
Msa0208710 MtrunA17_Chr4g0063981 45.070 71 29 2 184 254 1 61 3.45e-12 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0208710 AT1G73990.1 68.976 664 180 6 15 669 30 676 0.0 910
Msa0208710 AT1G73990.2 71.650 515 133 4 41 546 43 553 0.0 752

Find 176 sgRNAs with CRISPR-Local

Find 686 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCCTATGATCCTCGAATTTC+TGG 0.156422 2_1:-44708215 Msa0208710:CDS
AAATGGACACTTGGAATTTC+AGG 0.199983 2_1:-44704150 Msa0208710:CDS
GTCTTCTTCTTGAATGAGTT+TGG 0.227850 2_1:+44709632 None:intergenic
TCTTCTTCTTGAATGAGTTT+GGG 0.270184 2_1:+44709633 None:intergenic
CATACATTAAATTTGATATA+AGG 0.278743 2_1:+44705495 None:intergenic
TTTGAATTTGAACCTATTAC+TGG 0.285214 2_1:-44709499 Msa0208710:CDS
GCAGAAAGTCTTACGTTAAC+TGG 0.296101 2_1:-44702585 Msa0208710:CDS
CTTACTCGACCATTTAATAA+TGG 0.330697 2_1:-44698998 Msa0208710:three_prime_UTR
ATATGCATTCTGTGCAGATT+TGG 0.331313 2_1:+44699866 None:intergenic
GTAGAGGGAGGTGTGGAGGG+GGG 0.333560 2_1:+44709738 None:intergenic
AACTGCCAACGGTCGATTAC+GGG 0.340728 2_1:-44705088 Msa0208710:intron
ATAGTATATCCATTATTAAA+TGG 0.346167 2_1:+44698989 None:intergenic
CATGGTTTGGTTGATGCTAT+TGG 0.357229 2_1:-44699645 Msa0208710:CDS
GCAAATAGCTCTGCTTCATC+TGG 0.360163 2_1:+44699888 None:intergenic
AAACTGCCAACGGTCGATTA+CGG 0.362185 2_1:-44705089 Msa0208710:CDS
GACAAAATGGGGTTGTCGTT+GGG 0.368893 2_1:+44699292 None:intergenic
ACGTGCTTTCAACTCCGGTT+AGG 0.374016 2_1:+44699401 None:intergenic
CACAGTTTAAACTATCAATA+TGG 0.374090 2_1:+44708183 None:intergenic
AAATTCCTCCAACCAGTAAT+AGG 0.377007 2_1:+44709487 None:intergenic
GGCGGTAGAGGGAGGTGTGG+AGG 0.383098 2_1:+44709734 None:intergenic
TAGAGGGAGGTGTGGAGGGG+GGG 0.389232 2_1:+44709739 None:intergenic
AAAACCAGTCATTGCTTCAA+TGG 0.389485 2_1:-44702664 Msa0208710:CDS
GGTAGAGGGAGGTGTGGAGG+GGG 0.392523 2_1:+44709737 None:intergenic
CTTACGTTAACTGGTTCAAT+TGG 0.395398 2_1:-44702576 Msa0208710:CDS
AGGTAGCACAGGGTAGAGTT+TGG 0.398928 2_1:-44699689 Msa0208710:CDS
TACAATGAAGCTTCGTGGCC+AGG 0.399382 2_1:-44709401 Msa0208710:intron
ATTGAATGAAATAAAATTAA+CGG 0.399687 2_1:+44709806 None:intergenic
AATGAATTATTAAAATCTAC+AGG 0.400136 2_1:+44699245 None:intergenic
ATAGCCATCATCCGGGCCTC+AGG 0.402955 2_1:-44704114 Msa0208710:CDS
AGGGAGCATTAGTCGAGTTA+AGG 0.410229 2_1:-44704094 Msa0208710:CDS
CTGTTCGTCCTGAGGTATAT+TGG 0.410992 2_1:+44699584 None:intergenic
TTCAAATTCAAATTCTCCAC+TGG 0.413968 2_1:+44709510 None:intergenic
TTGGAGGAATTTCGTCGTTA+AGG 0.417101 2_1:-44709476 Msa0208710:CDS
ATTGAGAACTTTATAAATGA+AGG 0.419440 2_1:-44705551 Msa0208710:CDS
AGATGCAGCATCACATGGTT+TGG 0.425370 2_1:-44699658 Msa0208710:CDS
CGTGCTTTCAACTCCGGTTA+GGG 0.429338 2_1:+44699402 None:intergenic
AATACTCCCGGGTTAGGAAA+TGG 0.431438 2_1:-44704167 Msa0208710:CDS
CACGTTGAAGGAACTGCTAC+AGG 0.432578 2_1:-44699383 Msa0208710:CDS
CCTATGATCCTCGAATTTCT+GGG 0.434964 2_1:-44708214 Msa0208710:CDS
CGGTAGAGGGAGGTGTGGAG+GGG 0.441743 2_1:+44709736 None:intergenic
TGTCTCATCTGGACTTCTGT+AGG 0.442944 2_1:-44699042 Msa0208710:three_prime_UTR
AGGTAGAGAGGGACTAGATC+TGG 0.444443 2_1:+44699450 None:intergenic
GCGGTAGAGGGAGGTGTGGA+GGG 0.446200 2_1:+44709735 None:intergenic
GTCTCATCTGGACTTCTGTA+GGG 0.448382 2_1:-44699041 Msa0208710:three_prime_UTR
ACAGGAAATACTCCCGGGTT+AGG 0.449319 2_1:-44704173 Msa0208710:intron
AATGGATATACTATTTCTCT+TGG 0.458430 2_1:-44698980 Msa0208710:three_prime_UTR
CAATATACCTCAGGACGAAC+AGG 0.460640 2_1:-44699583 Msa0208710:intron
AAGAACTGATAGCCATCATC+CGG 0.468277 2_1:-44704122 Msa0208710:CDS
TATGCCTGGATTGTCTCATC+TGG 0.468428 2_1:-44699053 Msa0208710:three_prime_UTR
CCCAGAAATTCGAGGATCAT+AGG 0.470601 2_1:+44708214 None:intergenic
TAGATAATATCTATACAAAC+TGG 0.471417 2_1:-44705691 Msa0208710:CDS
GGGAGCATTAGTCGAGTTAA+GGG 0.472364 2_1:-44704093 Msa0208710:CDS
TTAGGATGTGGAGAGAAATT+CGG 0.477457 2_1:-44702701 Msa0208710:intron
GAGGCAAGAGCGTCACCTCC+AGG 0.482340 2_1:+44703382 None:intergenic
CAGTTAAGTGTCTCTAGCTC+AGG 0.482587 2_1:-44704069 Msa0208710:CDS
TGACAAAATGGGGTTGTCGT+TGG 0.483685 2_1:+44699291 None:intergenic
GCAGGTTACTGACATGTTGA+AGG 0.485150 2_1:-44705138 Msa0208710:intron
AGATGCTCATTGCGTATCCA+TGG 0.485437 2_1:-44709450 Msa0208710:CDS
CAAGTGTCCATTTCCTAACC+CGG 0.488540 2_1:+44704160 None:intergenic
GGCGCACGGAGTTCCCTAAC+CGG 0.489745 2_1:-44699415 Msa0208710:CDS
GACTAATGCTCCCTGAGGCC+CGG 0.494942 2_1:+44704103 None:intergenic
TTGAACCTATTACTGGTTGG+AGG 0.497114 2_1:-44709492 Msa0208710:CDS
TTAATAAAGAAATCATATCA+AGG 0.499995 2_1:-44701104 Msa0208710:CDS
CTTCAACGTGCTTTCAACTC+CGG 0.501193 2_1:+44699396 None:intergenic
ATAAGGTGTTGCGGCGGTAG+AGG 0.501582 2_1:+44709722 None:intergenic
AGTTTGGGGAAGAGAGTGAA+AGG 0.501583 2_1:+44709648 None:intergenic
CAAGATGGAGGAGGTAGCAC+AGG 0.504381 2_1:-44699700 Msa0208710:CDS
GCTCCCTGAGGCCCGGATGA+TGG 0.505280 2_1:+44704110 None:intergenic
GCGAAACTGTATGAGAAGAT+TGG 0.507637 2_1:-44701129 Msa0208710:CDS
TTGCCAATCCTTTCCACTTG+CGG 0.509346 2_1:+44705788 None:intergenic
CGTGCGCCTAATAAAATCTC+AGG 0.511141 2_1:+44699430 None:intergenic
GTTCTTACAATGAAGCTTCG+TGG 0.512091 2_1:-44709406 Msa0208710:CDS
TTTCTGATGGAGTTCAAGCT+AGG 0.514681 2_1:-44699351 Msa0208710:CDS
AGTGAAGAGTAGATTCTCTC+CGG 0.517158 2_1:-44708279 Msa0208710:CDS
AGAACGTACAGTCATAGATC+TGG 0.517426 2_1:+44699815 None:intergenic
TGATAGTTTAAACTGTGGGT+GGG 0.519618 2_1:-44708177 Msa0208710:CDS
GATAGTTTAAACTGTGGGTG+GGG 0.519973 2_1:-44708176 Msa0208710:CDS
GGAGGATACTACATGGCAAT+GGG 0.520535 2_1:-44702624 Msa0208710:CDS
TGATGGAGTTCAAGCTAGGA+TGG 0.520543 2_1:-44699347 Msa0208710:CDS
TATTGCCATAGCAAAATTGA+AGG 0.523316 2_1:-44699607 Msa0208710:CDS
CTCAACCTAGGTGGACAAGA+TGG 0.525487 2_1:-44699715 Msa0208710:intron
ATAGTAAGAATACATATGCC+TGG 0.529719 2_1:-44699067 Msa0208710:three_prime_UTR
ATTATCAGAATTGACAGTCC+TGG 0.529856 2_1:-44703400 Msa0208710:CDS
GGTTTGGTTGATGCTATTGG+TGG 0.533991 2_1:-44699642 Msa0208710:CDS
TTGATAGTTTAAACTGTGGG+TGG 0.533991 2_1:-44708178 Msa0208710:CDS
AATTTGAACCTATTACTGGT+TGG 0.537190 2_1:-44709495 Msa0208710:CDS
TAATATCTATACAAACTGGC+TGG 0.538238 2_1:-44705687 Msa0208710:CDS
CGGAGTTGAAAGCACGTTGA+AGG 0.539872 2_1:-44699395 Msa0208710:CDS
ATTGGCAAGTACAAAAGTGC+AGG 0.541412 2_1:-44705773 Msa0208710:CDS
GGTTCAATTGGAGTGGTCAC+AGG 0.541619 2_1:-44702564 Msa0208710:intron
CGGGTTAGGAAATGGACACT+TGG 0.542638 2_1:-44704159 Msa0208710:CDS
AAAGAAAAGTAAGCACTTGG+AGG 0.543239 2_1:+44707289 None:intergenic
GAACCGCAAGTGGAAAGGAT+TGG 0.547009 2_1:-44705791 Msa0208710:CDS
TCTTCTCATACAGTTTCGCT+AGG 0.547877 2_1:+44701133 None:intergenic
AACAAAGAAAAGTAAGCACT+TGG 0.548235 2_1:+44707286 None:intergenic
CTTCTTCTTGAATGAGTTTG+GGG 0.549616 2_1:+44709634 None:intergenic
GGAGTTCAAGCTAGGATGGA+TGG 0.550073 2_1:-44699343 Msa0208710:CDS
GGAAGAATCAAAGGCGCGAA+GGG 0.550689 2_1:+44709603 None:intergenic
TTCTACCCGTAATCGACCGT+TGG 0.552327 2_1:+44705083 None:intergenic
CCTTTACGAACACGTTCCCA+TGG 0.553283 2_1:+44709433 None:intergenic
ATTGAAGGCCAATATACCTC+AGG 0.554095 2_1:-44699592 Msa0208710:CDS
CCATGGGAACGTGTTCGTAA+AGG 0.554425 2_1:-44709433 Msa0208710:CDS
TTGAACACAGGAAATACTCC+CGG 0.555818 2_1:-44704179 Msa0208710:intron
GCTTGTAGGAAAATTTGTTG+TGG 0.558144 2_1:-44707377 Msa0208710:intron
ATATTGATAGTTTAAACTGT+GGG 0.562161 2_1:-44708181 Msa0208710:CDS
AATAAAATCTCAGGTAGAGA+GGG 0.563178 2_1:+44699439 None:intergenic
TCAGCCATTGAAGCAATGAC+TGG 0.563949 2_1:+44702660 None:intergenic
TAATAAAGAAATCATATCAA+GGG 0.565337 2_1:-44701103 Msa0208710:CDS
TCAAATTCAAATTCTCCACT+GGG 0.565424 2_1:+44709511 None:intergenic
AAATTTAATGTATGATGATG+AGG 0.565513 2_1:-44705486 Msa0208710:intron
TGGAGGATACTACATGGCAA+TGG 0.566417 2_1:-44702625 Msa0208710:CDS
TACCAGAACTTACAAATCAG+AGG 0.568309 2_1:+44703363 None:intergenic
AATAGGAGTTGAACCGCAAG+TGG 0.570611 2_1:-44705801 Msa0208710:CDS
TAAGGTGTTGCGGCGGTAGA+GGG 0.571866 2_1:+44709723 None:intergenic
CAGCTTACCTCTGAGGAATG+AGG 0.572547 2_1:+44707246 None:intergenic
CATTGCTTCAATGGCTGATG+TGG 0.572578 2_1:-44702655 Msa0208710:CDS
AAGAAAAGTAAGCACTTGGA+GGG 0.573901 2_1:+44707290 None:intergenic
TGAACACAGGAAATACTCCC+GGG 0.579067 2_1:-44704178 Msa0208710:intron
GAGTTGAACCGCAAGTGGAA+AGG 0.579458 2_1:-44705796 Msa0208710:CDS
TAGCCATCATCCGGGCCTCA+GGG 0.580655 2_1:-44704113 Msa0208710:CDS
GTTAACTGGTTCAATTGGAG+TGG 0.581126 2_1:-44702571 Msa0208710:CDS
AAGTCCAGATGAGACAATCC+AGG 0.583833 2_1:+44699049 None:intergenic
AAGTGTCCATTTCCTAACCC+GGG 0.584075 2_1:+44704161 None:intergenic
GGTGTCGGAGGAAGAATCAA+AGG 0.585155 2_1:+44709594 None:intergenic
CGTTGAAGGAACTGCTACAG+GGG 0.585808 2_1:-44699381 Msa0208710:CDS
CTATGGCAATAGCTCGGGAA+AGG 0.585943 2_1:+44699619 None:intergenic
TAATAAAATCTCAGGTAGAG+AGG 0.589084 2_1:+44699438 None:intergenic
AGGAAGAATCAAAGGCGCGA+AGG 0.591397 2_1:+44709602 None:intergenic
GAGAAGATTCGCACTGTCAG+AGG 0.592913 2_1:-44704024 Msa0208710:intron
GATGCTCATTGCGTATCCAT+GGG 0.597452 2_1:-44709449 Msa0208710:CDS
GTTGATAAGCTGAAAGAAGA+GGG 0.598500 2_1:-44705518 Msa0208710:CDS
AGATAGACCCCAGAAATTCG+AGG 0.602106 2_1:+44708206 None:intergenic
ATGGCTGATGTGGCAGCAAG+TGG 0.602616 2_1:-44702645 Msa0208710:CDS
GTGAAGAGTAGATTCTCTCC+GGG 0.602919 2_1:-44708278 Msa0208710:CDS
CATATTGATAGTTTAAACTG+TGG 0.604388 2_1:-44708182 Msa0208710:CDS
ATGTACGTACAGTGATTGCG+AGG 0.604584 2_1:+44699131 None:intergenic
GATAAAGTCTCTTCTGCCAA+AGG 0.606342 2_1:-44705665 Msa0208710:intron
TGCGGCGGTAGAGGGAGGTG+TGG 0.607201 2_1:+44709731 None:intergenic
GAAAGACCAGCTTACCTCTG+AGG 0.608420 2_1:+44707239 None:intergenic
GACATGTTGAAGGAGAGACT+TGG 0.612900 2_1:-44705128 Msa0208710:CDS
GGTGTTGCGGCGGTAGAGGG+AGG 0.613375 2_1:+44709726 None:intergenic
TCTCATCTGGACTTCTGTAG+GGG 0.617749 2_1:-44699040 Msa0208710:three_prime_UTR
ACGTTGAAGGAACTGCTACA+GGG 0.618985 2_1:-44699382 Msa0208710:CDS
AGTTGATAAGCTGAAAGAAG+AGG 0.622772 2_1:-44705519 Msa0208710:CDS
AATAAAGAAATCATATCAAG+GGG 0.623523 2_1:-44701102 Msa0208710:CDS
TAACTAACCTGTTCGTCCTG+AGG 0.625627 2_1:+44699576 None:intergenic
GGTAAAGATGCAGCATCACA+TGG 0.630228 2_1:-44699663 Msa0208710:CDS
TGGACACTTGGAATTTCAGG+TGG 0.630389 2_1:-44704147 Msa0208710:CDS
AGAACTGATAGCCATCATCC+GGG 0.633122 2_1:-44704121 Msa0208710:CDS
AGTGAAGTGATGAGCTGACA+AGG 0.634549 2_1:+44709884 None:intergenic
TAGCTCAGGCATCACTGCGG+AGG 0.634924 2_1:-44704055 Msa0208710:CDS
AGAAAAGTAAGCACTTGGAG+GGG 0.636043 2_1:+44707291 None:intergenic
GTAAAGTAGAAGAAATTCGA+AGG 0.637376 2_1:-44708154 Msa0208710:CDS
AGCAAGTGGAGGATACTACA+TGG 0.638303 2_1:-44702631 Msa0208710:CDS
CTAGGTGGACAAGATGGAGG+AGG 0.639098 2_1:-44699709 Msa0208710:intron
GCACAGGGTAGAGTTTGGAC+TGG 0.644303 2_1:-44699684 Msa0208710:CDS
GCTATGCCAGGTAACTGTTG+TGG 0.645235 2_1:-44699479 Msa0208710:intron
AACCTAGGTGGACAAGATGG+AGG 0.648031 2_1:-44699712 Msa0208710:intron
CTATGATCCTCGAATTTCTG+GGG 0.650704 2_1:-44708213 Msa0208710:CDS
ATTTGAGGTAGAGAAAGTCC+CGG 0.652101 2_1:+44708260 None:intergenic
ATGAATTATTAAAATCTACA+GGG 0.660702 2_1:+44699246 None:intergenic
TTAAAATCTACAGGGAACTG+AGG 0.661779 2_1:+44699254 None:intergenic
GCTGATGTGGCAGCAAGTGG+AGG 0.665663 2_1:-44702642 Msa0208710:CDS
ATCAGAATTGACAGTCCTGG+AGG 0.668918 2_1:-44703397 Msa0208710:CDS
TGTACGTACAGTGATTGCGA+GGG 0.672180 2_1:+44699132 None:intergenic
ATATAAACAATTTCGAGACA+AGG 0.676264 2_1:-44699847 Msa0208710:CDS
AAGATGGAGGAGGTAGCACA+GGG 0.676774 2_1:-44699699 Msa0208710:CDS
TCTCTTCACATGCACACGCG+AGG 0.678266 2_1:+44707320 None:intergenic
ATGATGATGATAAGGTGTTG+CGG 0.697257 2_1:+44709713 None:intergenic
GGCTGACATAAACTAAGACG+TGG 0.702100 2_1:-44709918 None:intergenic
GTACGTACAGTGATTGCGAG+GGG 0.704083 2_1:+44699133 None:intergenic
GCTGATGAAGATTATCCCAG+TGG 0.718921 2_1:-44709526 Msa0208710:CDS
GTTCAAGCCTCATTCCTCAG+AGG 0.722696 2_1:-44707253 Msa0208710:intron
AACTCGACTAATGCTCCCTG+AGG 0.724123 2_1:+44704098 None:intergenic
CTCTAGCTCAGGCATCACTG+CGG 0.730860 2_1:-44704058 Msa0208710:CDS
ATGATGATAAGGTGTTGCGG+CGG 0.786339 2_1:+44709716 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTGAATGAAATAAAATTAA+CGG + chr2_1:44699054-44699073 None:intergenic 10.0%
!!! CTTTATTTTATTTTGTTTAA+TGG + chr2_1:44699924-44699943 None:intergenic 10.0%
!! TTGACAAAAATAAAATAAAA+TGG - chr2_1:44702139-44702158 Msa0208710:intron 10.0%
!! TTAAACACTAAATATATAAA+AGG - chr2_1:44702180-44702199 Msa0208710:intron 10.0%
!! TAAACACTAAATATATAAAA+GGG - chr2_1:44702181-44702200 Msa0208710:intron 10.0%
!! TAAAATATTATAGATGTATA+TGG - chr2_1:44702820-44702839 Msa0208710:intron 10.0%
!!! TTTAATAATTTGATTTGTAT+TGG - chr2_1:44705556-44705575 Msa0208710:CDS 10.0%
!! TATATTAATAATAATAGGTA+TGG + chr2_1:44707949-44707968 None:intergenic 10.0%
!! TAATGTAATGTAAAAAAGTT+TGG - chr2_1:44699578-44699597 Msa0208710:intron 15.0%
!! AATGTAATGTAAAAAAGTTT+GGG - chr2_1:44699579-44699598 Msa0208710:intron 15.0%
!! AACATACTATATGTATATTT+GGG + chr2_1:44700495-44700514 None:intergenic 15.0%
!!! TTTACATTTTAGAGAAAATA+TGG - chr2_1:44701408-44701427 Msa0208710:intron 15.0%
!!! CAATAAATTACCTTTTTTTT+TGG - chr2_1:44701670-44701689 Msa0208710:intron 15.0%
!!! AAATTTTCCCATTATATTTT+AGG - chr2_1:44701996-44702015 Msa0208710:intron 15.0%
!!! GTGTTTTCAAATAAAAATTA+TGG - chr2_1:44702095-44702114 Msa0208710:intron 15.0%
!!! AATTTGAAACAACAATTAAA+AGG - chr2_1:44702210-44702229 Msa0208710:intron 15.0%
!!! TTGTTTTAAAGAGAAATTAT+TGG + chr2_1:44702601-44702620 None:intergenic 15.0%
!!! ACATCTATAATATTTTAGAA+AGG + chr2_1:44702817-44702836 None:intergenic 15.0%
!! CATACATTAAATTTGATATA+AGG + chr2_1:44703365-44703384 None:intergenic 15.0%
!! GAATATATATTAATAAAAGC+TGG + chr2_1:44703449-44703468 None:intergenic 15.0%
!! AAGATAAAATTGAAACTTTA+CGG + chr2_1:44703895-44703914 None:intergenic 15.0%
!!! AATTTTACAATTAGTGTATA+CGG - chr2_1:44704430-44704449 Msa0208710:intron 15.0%
!!! ATCATCTTGATATTTTATTT+TGG + chr2_1:44704646-44704665 None:intergenic 15.0%
!! AATATTATATTGGTATTTAC+CGG - chr2_1:44704932-44704951 Msa0208710:intron 15.0%
!!! ATATGTTTATTTATTTTCTC+TGG + chr2_1:44705164-44705183 None:intergenic 15.0%
!! ATTATAATAATTAGAAGTTG+TGG + chr2_1:44705355-44705374 None:intergenic 15.0%
!!! TTTTGAAAATAAAACTAACA+TGG + chr2_1:44705530-44705549 None:intergenic 15.0%
!!! CAAAAAAATTTGTCAAATTT+TGG - chr2_1:44705787-44705806 Msa0208710:CDS 15.0%
!!! AATCTAACTAAAAAAAGTAT+AGG - chr2_1:44706374-44706393 Msa0208710:intron 15.0%
!! TTAATAAAGAAATCATATCA+AGG - chr2_1:44707753-44707772 Msa0208710:intron 15.0%
!! TAATAAAGAAATCATATCAA+GGG - chr2_1:44707754-44707773 Msa0208710:intron 15.0%
!!! TGAAACTCAAATTTTAAATT+TGG + chr2_1:44708006-44708025 None:intergenic 15.0%
!! ATTATGTAAAACTTAATTCA+TGG + chr2_1:44708318-44708337 None:intergenic 15.0%
!!! AATCTTCATAATCAATTTTT+TGG - chr2_1:44708365-44708384 Msa0208710:intron 15.0%
!! TTAATAATGGTATGAATTAT+TGG - chr2_1:44708695-44708714 Msa0208710:intron 15.0%
!! TAATAATGGTATGAATTATT+GGG - chr2_1:44708696-44708715 Msa0208710:intron 15.0%
!!! TGTTTTTAATCTTTAATTGA+CGG - chr2_1:44708911-44708930 Msa0208710:intron 15.0%
!!! TCTTTTATAATTGACAAAAT+GGG + chr2_1:44709580-44709599 None:intergenic 15.0%
!!! ATCTTTTATAATTGACAAAA+TGG + chr2_1:44709581-44709600 None:intergenic 15.0%
!! ATGAATTATTAAAATCTACA+GGG + chr2_1:44709614-44709633 None:intergenic 15.0%
!! AATGAATTATTAAAATCTAC+AGG + chr2_1:44709615-44709634 None:intergenic 15.0%
!! ATAGTATATCCATTATTAAA+TGG + chr2_1:44709871-44709890 None:intergenic 15.0%
!!! AAGAAATAGTTTGAGTTTAA+CGG + chr2_1:44699745-44699764 None:intergenic 20.0%
!! TTATGAAAATAAGCTGAATA+TGG - chr2_1:44700001-44700020 Msa0208710:intron 20.0%
!!! GAATGTGATTAAATTGTTTT+AGG - chr2_1:44700199-44700218 Msa0208710:intron 20.0%
!! GAACATACTATATGTATATT+TGG + chr2_1:44700496-44700515 None:intergenic 20.0%
!!! ATATTGATAGTTTAAACTGT+GGG - chr2_1:44700676-44700695 Msa0208710:intron 20.0%
!! ACATCATATATTATGCAAAA+AGG + chr2_1:44700801-44700820 None:intergenic 20.0%
!!! AACAGAAGATATATTGATTT+GGG + chr2_1:44701123-44701142 None:intergenic 20.0%
!! AATATATCTTCTGTTGTTAT+AGG - chr2_1:44701128-44701147 Msa0208710:CDS 20.0%
!! ATATATCTTCTGTTGTTATA+GGG - chr2_1:44701129-44701148 Msa0208710:CDS 20.0%
!!! TTTTGTTTCGTTTTTACTTT+GGG + chr2_1:44701888-44701907 None:intergenic 20.0%
!!! ATTTTGTTTCGTTTTTACTT+TGG + chr2_1:44701889-44701908 None:intergenic 20.0%
!! GAAATGTCCTAAAATATAAT+GGG + chr2_1:44702006-44702025 None:intergenic 20.0%
!! AGAAATGTCCTAAAATATAA+TGG + chr2_1:44702007-44702026 None:intergenic 20.0%
!!! TTCATTTTTCTCTCTTAATT+AGG + chr2_1:44702260-44702279 None:intergenic 20.0%
!! AAAAATGAAGTTCAGTATTT+AGG - chr2_1:44702271-44702290 Msa0208710:intron 20.0%
!! AATTTGTCTGAAAGAAAAAT+AGG + chr2_1:44702416-44702435 None:intergenic 20.0%
!! AAAACAACATAGTATTATGA+CGG - chr2_1:44702614-44702633 Msa0208710:CDS 20.0%
!! CAAATAATTCCTTTATTGTT+TGG - chr2_1:44702877-44702896 Msa0208710:intron 20.0%
!!! AAACTTTTTCCAAACAATAA+AGG + chr2_1:44702889-44702908 None:intergenic 20.0%
!! AAAAGGTTTGATTAATAATC+TGG + chr2_1:44702946-44702965 None:intergenic 20.0%
!! CTGATGCTTAAAAATTTAAA+AGG + chr2_1:44702963-44702982 None:intergenic 20.0%
!! TAGATAATATCTATACAAAC+TGG - chr2_1:44703166-44703185 Msa0208710:intron 20.0%
!! ATTGAGAACTTTATAAATGA+AGG - chr2_1:44703306-44703325 Msa0208710:intron 20.0%
!!! AAATTTAATGTATGATGATG+AGG - chr2_1:44703371-44703390 Msa0208710:intron 20.0%
!! TAAAAACAATACATTCATAC+AGG + chr2_1:44703560-44703579 None:intergenic 20.0%
!! AGAATAGATTGCAATTAAAT+AGG - chr2_1:44703666-44703685 Msa0208710:intron 20.0%
!! GAATAGATTGCAATTAAATA+GGG - chr2_1:44703667-44703686 Msa0208710:intron 20.0%
!!! AAGTATATGTGTTTTATTTG+TGG - chr2_1:44703827-44703846 Msa0208710:intron 20.0%
!!! AGCTTTAGAAATAACTAATT+TGG - chr2_1:44703862-44703881 Msa0208710:intron 20.0%
!!! GCTTTAGAAATAACTAATTT+GGG - chr2_1:44703863-44703882 Msa0208710:intron 20.0%
!!! AAGAAGTATTTACATGTTTT+AGG - chr2_1:44703981-44704000 Msa0208710:intron 20.0%
!! TAACAATCAACAGAAATTAA+TGG + chr2_1:44704065-44704084 None:intergenic 20.0%
!! CATTATTAGGAATAAAAGTT+GGG + chr2_1:44704600-44704619 None:intergenic 20.0%
!! AAAATATCAAGATGATTTCT+TGG - chr2_1:44704650-44704669 Msa0208710:intron 20.0%
!! TTTAATGATAACTGCTTTAA+TGG + chr2_1:44704881-44704900 None:intergenic 20.0%
!!! TATTTATTTTCTCTGGATTT+GGG + chr2_1:44705157-44705176 None:intergenic 20.0%
!!! TTATTTATTTTCTCTGGATT+TGG + chr2_1:44705158-44705177 None:intergenic 20.0%
!!! TTGTATTGGTTTGAAATTAT+TGG - chr2_1:44705570-44705589 Msa0208710:CDS 20.0%
!!! CAAAACATTATTTTGTATCA+CGG - chr2_1:44706130-44706149 Msa0208710:intron 20.0%
!! AAAATCATAAATCTTTGGAT+TGG - chr2_1:44706618-44706637 Msa0208710:intron 20.0%
!!! TATTAGTGATGTATTTTAGA+GGG + chr2_1:44706701-44706720 None:intergenic 20.0%
!!! TTATTAGTGATGTATTTTAG+AGG + chr2_1:44706702-44706721 None:intergenic 20.0%
!!! CAACAATAATTTTTCTTCAT+TGG + chr2_1:44706864-44706883 None:intergenic 20.0%
!! GTAAAAAACATCATTTATGA+TGG - chr2_1:44707019-44707038 Msa0208710:intron 20.0%
!! TCAAAATCATTTCCAATAAA+AGG - chr2_1:44707319-44707338 Msa0208710:CDS 20.0%
!!! TAAATACTTCTTCCTTTTAT+TGG + chr2_1:44707334-44707353 None:intergenic 20.0%
!!! AAAGGAAGAAGTATTTAAAA+AGG - chr2_1:44707337-44707356 Msa0208710:CDS 20.0%
!!! TTTTCCAAAAACAATAATGT+AGG - chr2_1:44707418-44707437 Msa0208710:intron 20.0%
!!! ATGATATAACATTTTTCTGT+AGG - chr2_1:44707692-44707711 Msa0208710:intron 20.0%
!! AATAAAGAAATCATATCAAG+GGG - chr2_1:44707755-44707774 Msa0208710:intron 20.0%
!! AAGAAGTTATGCTAAAATAT+GGG - chr2_1:44708025-44708044 Msa0208710:intron 20.0%
!!! ATACATGATGGAATTTTTAA+CGG + chr2_1:44708769-44708788 None:intergenic 20.0%
!!! CTTTTATAATTGACAAAATG+GGG + chr2_1:44709579-44709598 None:intergenic 20.0%
!!! TTGTATTTTTTTTTGTTCGA+GGG - chr2_1:44709667-44709686 Msa0208710:CDS 20.0%
! AATAAAATTAACGGAAGAGA+GGG + chr2_1:44699045-44699064 None:intergenic 25.0%
! AAATAAAATTAACGGAAGAG+AGG + chr2_1:44699046-44699065 None:intergenic 25.0%
!!! AATCACTTTTTCTTCGATTT+TGG + chr2_1:44699287-44699306 None:intergenic 25.0%
! TTTGAATTTGAACCTATTAC+TGG - chr2_1:44699358-44699377 Msa0208710:CDS 25.0%
! CTCAAATATTTACTCAACAA+AGG + chr2_1:44699518-44699537 None:intergenic 25.0%
!!! TGTTTATGTTTGAGTTGAAT+TGG - chr2_1:44699546-44699565 Msa0208710:intron 25.0%
! GTAAAAAAGTTTGGGAAAAT+AGG - chr2_1:44699587-44699606 Msa0208710:CDS 25.0%
!! ATTTTACACTAACATCCAAT+AGG + chr2_1:44699699-44699718 None:intergenic 25.0%
! CTAGTTTAATTAAGTGACAT+AGG - chr2_1:44699820-44699839 Msa0208710:intron 25.0%
!! TTATGTTGTTTATCCAAATC+AGG + chr2_1:44699846-44699865 None:intergenic 25.0%
! CAAAATAAGCCAATTCAAAT+AGG - chr2_1:44700100-44700119 Msa0208710:intron 25.0%
! ACATGGTAGTAAGATATAAT+TGG - chr2_1:44700124-44700143 Msa0208710:intron 25.0%
! TGTTCATATGATAAGCAATT+AGG + chr2_1:44700164-44700183 None:intergenic 25.0%
!!! TATGAACACTATTTCTAGAA+AGG - chr2_1:44700176-44700195 Msa0208710:intron 25.0%
!!! ATGAACACTATTTCTAGAAA+GGG - chr2_1:44700177-44700196 Msa0208710:intron 25.0%
! GTATGATTATAATTGAGCAT+GGG + chr2_1:44700428-44700447 None:intergenic 25.0%
! AGTATGATTATAATTGAGCA+TGG + chr2_1:44700429-44700448 None:intergenic 25.0%
!!! TCTGCTTTCATTTTTCAAAT+TGG - chr2_1:44700514-44700533 Msa0208710:intron 25.0%
! AAAAAATTCTCGCATATTTG+AGG + chr2_1:44700615-44700634 None:intergenic 25.0%
! CACAGTTTAAACTATCAATA+TGG + chr2_1:44700677-44700696 None:intergenic 25.0%
!! CATATTGATAGTTTAAACTG+TGG - chr2_1:44700675-44700694 Msa0208710:intron 25.0%
! ATCTTGAACTTCAAAAAATC+AGG - chr2_1:44700729-44700748 Msa0208710:intron 25.0%
! TGCATAATATATGATGTTGA+TGG - chr2_1:44700804-44700823 Msa0208710:intron 25.0%
! CTGTAGTTAGTAATTATTGA+TGG - chr2_1:44700905-44700924 Msa0208710:intron 25.0%
!! CAACAGAAGATATATTGATT+TGG + chr2_1:44701124-44701143 None:intergenic 25.0%
! TATATCTTCTGTTGTTATAG+GGG - chr2_1:44701130-44701149 Msa0208710:CDS 25.0%
!! TGATGCATGTTTAATTTACA+TGG - chr2_1:44701156-44701175 Msa0208710:intron 25.0%
! AAAATTTCATGGTTTATCCA+TGG + chr2_1:44701197-44701216 None:intergenic 25.0%
! CACTAAGTGTTAAAATTTCA+TGG + chr2_1:44701208-44701227 None:intergenic 25.0%
! AATACTTCTCGTATATCATT+TGG - chr2_1:44701229-44701248 Msa0208710:intron 25.0%
!!! TTTTTTTATCTCTGCTGAAA+TGG - chr2_1:44701286-44701305 Msa0208710:intron 25.0%
!! ATTCTTTTTCTTGACATGTA+GGG + chr2_1:44701513-44701532 None:intergenic 25.0%
!! TATTCTTTTTCTTGACATGT+AGG + chr2_1:44701514-44701533 None:intergenic 25.0%
!! TTGCATTGTTTAAAGTTTGA+CGG - chr2_1:44701647-44701666 Msa0208710:intron 25.0%
!!! TATTACACTTGCTTTTTATC+TGG - chr2_1:44701758-44701777 Msa0208710:intron 25.0%
! ACATTATACAATAGTTCATC+TGG + chr2_1:44701841-44701860 None:intergenic 25.0%
! GATGAACTATTGTATAATGT+AGG - chr2_1:44701841-44701860 Msa0208710:intron 25.0%
! GTAAAAACGAAACAAAATCA+TGG - chr2_1:44701891-44701910 Msa0208710:intron 25.0%
! TATTGAATTAGGAAAGCTTT+GGG + chr2_1:44702364-44702383 None:intergenic 25.0%
! GATGGAAAAAATATTACAAG+AGG + chr2_1:44702556-44702575 None:intergenic 25.0%
! ATAACGTTTGTACATAACTT+TGG - chr2_1:44702741-44702760 Msa0208710:intron 25.0%
!!! CTTTTTTGCCAATTTAAAAC+AGG - chr2_1:44703267-44703286 Msa0208710:intron 25.0%
!!! TTCCTTTTCCTGTTTTAAAT+TGG + chr2_1:44703278-44703297 None:intergenic 25.0%
!! GTATCTTATTTAGTGATTAG+TGG - chr2_1:44703488-44703507 Msa0208710:intron 25.0%
!!! TTTTAGTTGCTTCTTTATTG+TGG - chr2_1:44703575-44703594 Msa0208710:intron 25.0%
!! GTTGTATTCTTATTTATTGC+TGG - chr2_1:44703619-44703638 Msa0208710:intron 25.0%
! TGCAATTAAATAGGGTTATA+AGG - chr2_1:44703675-44703694 Msa0208710:intron 25.0%
!! GAAAATGTATGTTTTCAGAA+TGG + chr2_1:44704008-44704027 None:intergenic 25.0%
! TGTTAATTAGATCTAAGTAG+CGG - chr2_1:44704080-44704099 Msa0208710:CDS 25.0%
! ATAAAAGTTGGGTAAGAAAA+AGG + chr2_1:44704589-44704608 None:intergenic 25.0%
! GCATTATTAGGAATAAAAGT+TGG + chr2_1:44704601-44704620 None:intergenic 25.0%
!! TGTATTTTATTCACCAAAAG+GGG + chr2_1:44704623-44704642 None:intergenic 25.0%
!! GTGTATTTTATTCACCAAAA+GGG + chr2_1:44704624-44704643 None:intergenic 25.0%
!!! ATTGCTATTGTTTTTCTAGT+AGG - chr2_1:44704906-44704925 Msa0208710:intron 25.0%
!!! TTGCTATTGTTTTTCTAGTA+GGG - chr2_1:44704907-44704926 Msa0208710:intron 25.0%
! TAGTAGGGGAAATATTATAT+TGG - chr2_1:44704922-44704941 Msa0208710:intron 25.0%
!! TAAGATTAATGAGAAGCATA+GGG - chr2_1:44704961-44704980 Msa0208710:intron 25.0%
! TTTATGAGATCTATGAATCT+CGG - chr2_1:44705122-44705141 Msa0208710:CDS 25.0%
! ATTACTAAAAGAGAATAGAC+AGG + chr2_1:44705283-44705302 None:intergenic 25.0%
!!! CTTAAATTTTTTTGACTCTG+AGG + chr2_1:44705431-44705450 None:intergenic 25.0%
! CTCAGAGTCAAAAAAATTTA+AGG - chr2_1:44705429-44705448 Msa0208710:intron 25.0%
! TGAAAATAAAACTAACATGG+AGG + chr2_1:44705527-44705546 None:intergenic 25.0%
!!! ATTGGTTTGAAATTATTGGT+TGG - chr2_1:44705574-44705593 Msa0208710:intron 25.0%
!!! TGTTTTTATTCCCCAAAATA+CGG - chr2_1:44705739-44705758 Msa0208710:CDS 25.0%
!! ATAGTTAGTTACCGTATTTT+GGG + chr2_1:44705753-44705772 None:intergenic 25.0%
!! AATAGTTAGTTACCGTATTT+TGG + chr2_1:44705754-44705773 None:intergenic 25.0%
!! ATTGTTATCATTTTCAGTAG+AGG + chr2_1:44705814-44705833 None:intergenic 25.0%
! CTACTGAAAATGATAACAAT+TGG - chr2_1:44705814-44705833 Msa0208710:CDS 25.0%
! AAAAGGGTAATAATTGCATT+TGG + chr2_1:44705930-44705949 None:intergenic 25.0%
! CAAATTTAACTGGACTATAA+GGG + chr2_1:44706016-44706035 None:intergenic 25.0%
! TCAAATTTAACTGGACTATA+AGG + chr2_1:44706017-44706036 None:intergenic 25.0%
! AGATGCATTTCAAATTTAAC+TGG + chr2_1:44706026-44706045 None:intergenic 25.0%
!! AGTTAAATTTGAAATGCATC+TGG - chr2_1:44706025-44706044 Msa0208710:intron 25.0%
! ATTAAAATCATTCATGCACA+TGG - chr2_1:44706401-44706420 Msa0208710:intron 25.0%
! TTTCTATGTTACAATCTACT+TGG - chr2_1:44706454-44706473 Msa0208710:intron 25.0%
!! ATGTTACTTATAGTCAAGAT+AGG - chr2_1:44706590-44706609 Msa0208710:intron 25.0%
!! TGTTACTTATAGTCAAGATA+GGG - chr2_1:44706591-44706610 Msa0208710:intron 25.0%
! GGATGAAAATCATAAATCTT+TGG - chr2_1:44706613-44706632 Msa0208710:intron 25.0%
!!! ATTAGTGATGTATTTTAGAG+GGG + chr2_1:44706700-44706719 None:intergenic 25.0%
! ACTTCAATTCATAATCCATA+AGG - chr2_1:44706732-44706751 Msa0208710:intron 25.0%
!! ATTTATGATGGAGATAAACA+TGG - chr2_1:44707031-44707050 Msa0208710:intron 25.0%
!! TTTATGATGGAGATAAACAT+GGG - chr2_1:44707032-44707051 Msa0208710:intron 25.0%
!! TTGCACAATCATATGATTTT+TGG + chr2_1:44707209-44707228 None:intergenic 25.0%
! TCGAATGAATAATTAGCATT+CGG + chr2_1:44707585-44707604 None:intergenic 25.0%
! CAAGAAGTTATGCTAAAATA+TGG - chr2_1:44708024-44708043 Msa0208710:intron 25.0%
! AATAATATACGTAGCAAGTT+TGG + chr2_1:44708090-44708109 None:intergenic 25.0%
!!! CTACGTATATTATTGATTTG+AGG - chr2_1:44708096-44708115 Msa0208710:intron 25.0%
! TTTGATGTAGTCAAAAAGTT+AGG + chr2_1:44708274-44708293 None:intergenic 25.0%
!! TGTTTCTTTCAAATTGCTTT+TGG - chr2_1:44708435-44708454 Msa0208710:intron 25.0%
! AATTGTACTATAAATCTTGC+AGG - chr2_1:44708655-44708674 Msa0208710:intron 25.0%
! ATTGTACTATAAATCTTGCA+GGG - chr2_1:44708656-44708675 Msa0208710:intron 25.0%
! ACCATATATGTGGTTAATAA+TGG - chr2_1:44708682-44708701 Msa0208710:intron 25.0%
! ACCATTATTAACCACATATA+TGG + chr2_1:44708686-44708705 None:intergenic 25.0%
!!! CAATCTACTTTTATACATGA+TGG + chr2_1:44708781-44708800 None:intergenic 25.0%
!! CTTGTAACTTGTAATGTATA+GGG + chr2_1:44708851-44708870 None:intergenic 25.0%
!! ACTTGTAACTTGTAATGTAT+AGG + chr2_1:44708852-44708871 None:intergenic 25.0%
! AAAGATTAAAAACACGTAAG+TGG + chr2_1:44708905-44708924 None:intergenic 25.0%
!! TTTAATTGACGGTTTTTACA+AGG - chr2_1:44708922-44708941 Msa0208710:intron 25.0%
! ATATAAACAATTTCGAGACA+AGG - chr2_1:44709010-44709029 Msa0208710:intron 25.0%
! ATGATGAATAAAAAAAGCTC+TGG + chr2_1:44709089-44709108 None:intergenic 25.0%
! CTCAAATACAACATTCATAT+TGG + chr2_1:44709325-44709344 None:intergenic 25.0%
! CTCGAACAAAAAAAAATACA+AGG + chr2_1:44709668-44709687 None:intergenic 25.0%
!!! CTTGTATTTTTTTTTGTTCG+AGG - chr2_1:44709666-44709685 Msa0208710:CDS 25.0%
!! AATGGATATACTATTTCTCT+TGG - chr2_1:44709877-44709896 Msa0208710:five_prime_UTR 25.0%
! TGATGATGATGATGATGATA+AGG + chr2_1:44699155-44699174 None:intergenic 30.0%
TCTTCTTCTTGAATGAGTTT+GGG + chr2_1:44699227-44699246 None:intergenic 30.0%
!! TTTTTCTTCGATTTTGGTGT+CGG + chr2_1:44699281-44699300 None:intergenic 30.0%
GAAGAAAAAGTGATTCAAGA+AGG - chr2_1:44699292-44699311 Msa0208710:CDS 30.0%
TCAAATTCAAATTCTCCACT+GGG + chr2_1:44699349-44699368 None:intergenic 30.0%
TTCAAATTCAAATTCTCCAC+TGG + chr2_1:44699350-44699369 None:intergenic 30.0%
AATTTGAACCTATTACTGGT+TGG - chr2_1:44699362-44699381 Msa0208710:CDS 30.0%
!! AAGAAATGTGATGATGGTAA+AGG + chr2_1:44699493-44699512 None:intergenic 30.0%
AAGGATAAGAAATGTGATGA+TGG + chr2_1:44699499-44699518 None:intergenic 30.0%
! GAGAAATAGTTGATTCCTAT+TGG - chr2_1:44699681-44699700 Msa0208710:CDS 30.0%
! CACTATGTTTAAAATCGTAG+AGG - chr2_1:44699786-44699805 Msa0208710:intron 30.0%
! TGTTTAAAATCGTAGAGGTA+TGG - chr2_1:44699791-44699810 Msa0208710:intron 30.0%
TTTGCTTTCATGAGCTATAT+TGG - chr2_1:44699973-44699992 Msa0208710:intron 30.0%
AAGTACTTATGTGAGTAGAA+AGG - chr2_1:44700075-44700094 Msa0208710:intron 30.0%
CAAATCATGACGCAATATTA+AGG - chr2_1:44700305-44700324 Msa0208710:intron 30.0%
GTAAAGTAGAAGAAATTCGA+AGG - chr2_1:44700703-44700722 Msa0208710:intron 30.0%
TGCAAGTTTACTGAATTTCT+TGG + chr2_1:44700869-44700888 None:intergenic 30.0%
! GTAATTATTGATGGCTTCTA+TGG - chr2_1:44700914-44700933 Msa0208710:intron 30.0%
! TCTTGAACAATTTTCCTACT+TGG - chr2_1:44700976-44700995 Msa0208710:intron 30.0%
AAACTTCAGAGTTTATGCAT+TGG + chr2_1:44701005-44701024 None:intergenic 30.0%
GAATGTTCTCTATAGGATAT+AGG + chr2_1:44701057-44701076 None:intergenic 30.0%
! TATCTCCTCTTGTTATATGA+GGG - chr2_1:44701344-44701363 Msa0208710:intron 30.0%
AACAAAGAAAAGTAAGCACT+TGG + chr2_1:44701574-44701593 None:intergenic 30.0%
!! AGTGCTTACTTTTCTTTGTT+TGG - chr2_1:44701574-44701593 Msa0208710:intron 30.0%
TACACACACACCAAAAAAAA+AGG + chr2_1:44701683-44701702 None:intergenic 30.0%
TTACCATTGAAAGACCAAAT+TGG + chr2_1:44701712-44701731 None:intergenic 30.0%
!!! CTTTTTATCTGGCCTTATAT+AGG - chr2_1:44701769-44701788 Msa0208710:intron 30.0%
GAATTGATCAAGCCTATATA+AGG + chr2_1:44701784-44701803 None:intergenic 30.0%
AACTATTGTATAATGTAGGC+TGG - chr2_1:44701845-44701864 Msa0208710:intron 30.0%
ACTATTGTATAATGTAGGCT+GGG - chr2_1:44701846-44701865 Msa0208710:intron 30.0%
GTATTGAATTAGGAAAGCTT+TGG + chr2_1:44702365-44702384 None:intergenic 30.0%
AGCTTTCCTAATTCAATACT+AGG - chr2_1:44702366-44702385 Msa0208710:intron 30.0%
GCTTTCCTAATTCAATACTA+GGG - chr2_1:44702367-44702386 Msa0208710:intron 30.0%
ATGACATTGCCAATAAATGT+AGG + chr2_1:44702495-44702514 None:intergenic 30.0%
GAAAAAATATTACAAGAGGC+TGG + chr2_1:44702552-44702571 None:intergenic 30.0%
! TGCTTTAACAACTAGTTTGA+TGG + chr2_1:44702574-44702593 None:intergenic 30.0%
ACAAACGTTATATGAAGTAC+TGG + chr2_1:44702732-44702751 None:intergenic 30.0%
! ATTATTTGAGACACTAGCAT+TGG + chr2_1:44702865-44702884 None:intergenic 30.0%
!!! CAGTTGTTAATTTTTTGTCC+AGG - chr2_1:44703021-44703040 Msa0208710:intron 30.0%
TAATATCTATACAAACTGGC+TGG - chr2_1:44703170-44703189 Msa0208710:intron 30.0%
!! TTGAAAAGCAAAAGTACCTT+TGG + chr2_1:44703211-44703230 None:intergenic 30.0%
! TGCCAATTTAAAACAGGAAA+AGG - chr2_1:44703273-44703292 Msa0208710:intron 30.0%
! TCTTATTTAGTGATTAGTGG+TGG - chr2_1:44703491-44703510 Msa0208710:intron 30.0%
!! TTAGTGGTGGATATATTTGA+TGG - chr2_1:44703504-44703523 Msa0208710:intron 30.0%
CCAAACAAAAACTCTTCATT+TGG + chr2_1:44703536-44703555 None:intergenic 30.0%
! CCAAATGAAGAGTTTTTGTT+TGG - chr2_1:44703533-44703552 Msa0208710:intron 30.0%
! TGAAACATTGAATGTTTTGC+AGG - chr2_1:44703701-44703720 Msa0208710:intron 30.0%
AACAGATAAAAAACTGCCAA+CGG - chr2_1:44703758-44703777 Msa0208710:intron 30.0%
GTTCTTATTGCATAGTAGAA+CGG + chr2_1:44704193-44704212 None:intergenic 30.0%
!!! TTCACTAACTGCTTCTTTTT+TGG - chr2_1:44704222-44704241 Msa0208710:intron 30.0%
CAATTAGTGTATACGGAAAT+TGG - chr2_1:44704437-44704456 Msa0208710:intron 30.0%
ATTTCATTATCTCTTTGTCC+TGG - chr2_1:44704511-44704530 Msa0208710:intron 30.0%
! GGTGTATTTTATTCACCAAA+AGG + chr2_1:44704625-44704644 None:intergenic 30.0%
!! TGCTATTGTTTTTCTAGTAG+GGG - chr2_1:44704908-44704927 Msa0208710:intron 30.0%
! CTAAGATTAATGAGAAGCAT+AGG - chr2_1:44704960-44704979 Msa0208710:intron 30.0%
! TTTGGAATCAAAAGCTTCAA+AGG + chr2_1:44704996-44705015 None:intergenic 30.0%
!! GAAGCTTTTGATTCCAAAAA+TGG - chr2_1:44704998-44705017 Msa0208710:intron 30.0%
ACTAAGAGATACATTGACAA+AGG - chr2_1:44705047-44705066 Msa0208710:intron 30.0%
CAGGTAGATTATATTGAAAC+AGG - chr2_1:44705076-44705095 Msa0208710:intron 30.0%
TTATATTGAAACAGGATGCT+AGG - chr2_1:44705084-44705103 Msa0208710:intron 30.0%
TTATGAGATCTATGAATCTC+GGG - chr2_1:44705123-44705142 Msa0208710:CDS 30.0%
ATATAACAAACGCACTATCT+TGG - chr2_1:44705301-44705320 Msa0208710:intron 30.0%
TTGTGCTATAATTTACGTCA+TGG - chr2_1:44705386-44705405 Msa0208710:intron 30.0%
! TAGTTAGTTACCGTATTTTG+GGG + chr2_1:44705752-44705771 None:intergenic 30.0%
CGGTAACTAACTATTACTTT+CGG - chr2_1:44705759-44705778 Msa0208710:CDS 30.0%
CAAAAGGTGAAGAAACTTTA+GGG - chr2_1:44705903-44705922 Msa0208710:intron 30.0%
AAAAGGTGAAGAAACTTTAG+GGG - chr2_1:44705904-44705923 Msa0208710:intron 30.0%
!!! GCAATTATTACCCTTTTTTG+AGG - chr2_1:44705933-44705952 Msa0208710:intron 30.0%
!!! GTTTTTAGCTCCTCAAAAAA+GGG + chr2_1:44705946-44705965 None:intergenic 30.0%
!!! TGTTTTTAGCTCCTCAAAAA+AGG + chr2_1:44705947-44705966 None:intergenic 30.0%
TTCCTCTCAAGTTTAAAAGT+AGG + chr2_1:44705978-44705997 None:intergenic 30.0%
! GTTAGGCTTTCTAAGTATTT+TGG - chr2_1:44706070-44706089 Msa0208710:intron 30.0%
!! ATCACGGTGTTTTATTGTTT+CGG - chr2_1:44706318-44706337 Msa0208710:intron 30.0%
TGCTGCTCAATTTAAGAATT+TGG - chr2_1:44706477-44706496 Msa0208710:intron 30.0%
GTTACTTATAGTCAAGATAG+GGG - chr2_1:44706592-44706611 Msa0208710:intron 30.0%
ACAATGAGGAAAAAGTTGTT+TGG - chr2_1:44706963-44706982 Msa0208710:intron 30.0%
CAATGAGGAAAAAGTTGTTT+GGG - chr2_1:44706964-44706983 Msa0208710:intron 30.0%
ATCATATCCAGAATATGATC+AGG - chr2_1:44707171-44707190 Msa0208710:intron 30.0%
CATGCTTAAAGTCATTATTG+TGG - chr2_1:44707245-44707264 Msa0208710:intron 30.0%
AGAGATTTCAAAAGAAGGAA+AGG + chr2_1:44707282-44707301 None:intergenic 30.0%
TCCAAAAACAATAATGTAGG+AGG - chr2_1:44707421-44707440 Msa0208710:intron 30.0%
! TCCTCCTACATTATTGTTTT+TGG + chr2_1:44707425-44707444 None:intergenic 30.0%
CTAATGTGCATAACCTATAA+AGG + chr2_1:44707454-44707473 None:intergenic 30.0%
! TTTTCATGCTACCATTTGAA+TGG - chr2_1:44707531-44707550 Msa0208710:intron 30.0%
GCAGTTAATTACCATTCAAA+TGG + chr2_1:44707545-44707564 None:intergenic 30.0%
TAATAGGTATGGAATCATCT+AGG + chr2_1:44707938-44707957 None:intergenic 30.0%
AAGTTATGCTAAAATATGGG+TGG - chr2_1:44708028-44708047 Msa0208710:intron 30.0%
TTTATATGCCTATAGCTTGA+AGG + chr2_1:44708058-44708077 None:intergenic 30.0%
!! TGGTTCTAGAGTTGATAAAT+TGG + chr2_1:44708151-44708170 None:intergenic 30.0%
GCAAAAGAATAACAAAAGCA+AGG + chr2_1:44708462-44708481 None:intergenic 30.0%
ACTAACAACCTCGATATTAA+CGG + chr2_1:44708495-44708514 None:intergenic 30.0%
TATAGTACAATTCAACACAC+TGG + chr2_1:44708647-44708666 None:intergenic 30.0%
! TCTCTGAAGAAAAGAAATCA+AGG - chr2_1:44708733-44708752 Msa0208710:intron 30.0%
! AGAAAAGAAATCAAGGTGTT+AGG - chr2_1:44708740-44708759 Msa0208710:intron 30.0%
ATTAAAAACACGTAAGTGGA+AGG + chr2_1:44708901-44708920 None:intergenic 30.0%
GAGAAAAGTAGTTGTATGAA+AGG + chr2_1:44709125-44709144 None:intergenic 30.0%
TATTGCCATAGCAAAATTGA+AGG - chr2_1:44709250-44709269 Msa0208710:intron 30.0%
GAGTAGTACAGTTACAAAAA+TGG - chr2_1:44709342-44709361 Msa0208710:intron 30.0%
AATAAAATCTCAGGTAGAGA+GGG + chr2_1:44709421-44709440 None:intergenic 30.0%
TAATAAAATCTCAGGTAGAG+AGG + chr2_1:44709422-44709441 None:intergenic 30.0%
! TCTCTACCTGAGATTTTATT+AGG - chr2_1:44709421-44709440 Msa0208710:CDS 30.0%
!! TGGAATCATTTTTCGTTCAT+TGG - chr2_1:44709534-44709553 Msa0208710:CDS 30.0%
!! ATCATTTTTCGTTCATTGGA+AGG - chr2_1:44709538-44709557 Msa0208710:CDS 30.0%
ATAGTAAGAATACATATGCC+TGG - chr2_1:44709790-44709809 Msa0208710:five_prime_UTR 30.0%
CTTACTCGACCATTTAATAA+TGG - chr2_1:44709859-44709878 Msa0208710:intron 30.0%
!! CTATTTCTCTTGGTACTTTT+TGG - chr2_1:44709887-44709906 Msa0208710:five_prime_UTR 30.0%
!! ATGATGATGATAAGGTGTTG+CGG + chr2_1:44699147-44699166 None:intergenic 35.0%
CTTCTTCTTGAATGAGTTTG+GGG + chr2_1:44699226-44699245 None:intergenic 35.0%
GTCTTCTTCTTGAATGAGTT+TGG + chr2_1:44699228-44699247 None:intergenic 35.0%
AAATTCCTCCAACCAGTAAT+AGG + chr2_1:44699373-44699392 None:intergenic 35.0%
!! TGATGATGGTAAAGGAAAGA+AGG + chr2_1:44699485-44699504 None:intergenic 35.0%
! ACTATTTCTCCACCTCTATT+AGG + chr2_1:44699671-44699690 None:intergenic 35.0%
! TAAAATCGTAGAGGTATGGT+AGG - chr2_1:44699795-44699814 Msa0208710:intron 35.0%
TACCATGTGCCTATTTGAAT+TGG + chr2_1:44700112-44700131 None:intergenic 35.0%
! TTGATAGTTTAAACTGTGGG+TGG - chr2_1:44700679-44700698 Msa0208710:intron 35.0%
TGATAGTTTAAACTGTGGGT+GGG - chr2_1:44700680-44700699 Msa0208710:intron 35.0%
CTCTCTTGAATGTTCTCTAT+AGG + chr2_1:44701064-44701083 None:intergenic 35.0%
TTTATCCATGGCTTATGCAT+TGG + chr2_1:44701185-44701204 None:intergenic 35.0%
AAAAAGGAACCTTCTACTGA+AGG + chr2_1:44701312-44701331 None:intergenic 35.0%
!! GATACATTGATTCGGGAAAA+AGG + chr2_1:44701328-44701347 None:intergenic 35.0%
!! AAGAGGAGATACATTGATTC+GGG + chr2_1:44701335-44701354 None:intergenic 35.0%
! CAAGAGGAGATACATTGATT+CGG + chr2_1:44701336-44701355 None:intergenic 35.0%
! GTATCTCCTCTTGTTATATG+AGG - chr2_1:44701343-44701362 Msa0208710:intron 35.0%
TTCATCCCTCATATAACAAG+AGG + chr2_1:44701352-44701371 None:intergenic 35.0%
!!! GATGAAGCCTGTTATTTTCT+GGG - chr2_1:44701366-44701385 Msa0208710:intron 35.0%
TCACAATCCCAGAAAATAAC+AGG + chr2_1:44701376-44701395 None:intergenic 35.0%
AAGTATCAATGCACGTTAGA+GGG + chr2_1:44701454-44701473 None:intergenic 35.0%
! TGATACTTGAGTTTGCTTGT+AGG - chr2_1:44701466-44701485 Msa0208710:intron 35.0%
!! GCTTGTAGGAAAATTTGTTG+TGG - chr2_1:44701480-44701499 Msa0208710:intron 35.0%
AAGAAAAGTAAGCACTTGGA+GGG + chr2_1:44701570-44701589 None:intergenic 35.0%
AAAGAAAAGTAAGCACTTGG+AGG + chr2_1:44701571-44701590 None:intergenic 35.0%
TGTGTGTATGATCTCCAATT+TGG - chr2_1:44701695-44701714 Msa0208710:intron 35.0%
! TCTCCAATTTGGTCTTTCAA+TGG - chr2_1:44701706-44701725 Msa0208710:intron 35.0%
GTCTTTCAATGGTAATTTCG+AGG - chr2_1:44701717-44701736 Msa0208710:intron 35.0%
ATAGTTCATCTGGTGTCTTT+GGG + chr2_1:44701831-44701850 None:intergenic 35.0%
AATAGTTCATCTGGTGTCTT+TGG + chr2_1:44701832-44701851 None:intergenic 35.0%
!! GTTTTTACTTTGGGTTACCA+TGG + chr2_1:44701879-44701898 None:intergenic 35.0%
! TGACACCCTAGTATTGAATT+AGG + chr2_1:44702375-44702394 None:intergenic 35.0%
! TAGGGTGTCAAATGATACAT+TGG - chr2_1:44702385-44702404 Msa0208710:intron 35.0%
! AGGGTGTCAAATGATACATT+GGG - chr2_1:44702386-44702405 Msa0208710:intron 35.0%
CAAATTAGATCTGACCCAAA+TGG - chr2_1:44702430-44702449 Msa0208710:intron 35.0%
CAATAAATGTAGGACCAATC+TGG + chr2_1:44702485-44702504 None:intergenic 35.0%
! CAGATTGGTCCTACATTTAT+TGG - chr2_1:44702483-44702502 Msa0208710:intron 35.0%
ATCCTTGTAAGAAACTTACC+TGG - chr2_1:44702702-44702721 Msa0208710:intron 35.0%
TACCAGGTAAGTTTCTTACA+AGG + chr2_1:44702707-44702726 None:intergenic 35.0%
TCAGTACAAGACTTAACTTC+AGG + chr2_1:44702790-44702809 None:intergenic 35.0%
!! CCTATTTTATCTAAAACGCC+TGG + chr2_1:44703042-44703061 None:intergenic 35.0%
!! CCAGGCGTTTTAGATAAAAT+AGG - chr2_1:44703039-44703058 Msa0208710:intron 35.0%
! CTCACAATTTTCATCAGACA+TGG + chr2_1:44703130-44703149 None:intergenic 35.0%
!! AGTTGATAAGCTGAAAGAAG+AGG - chr2_1:44703338-44703357 Msa0208710:intron 35.0%
! GTTGATAAGCTGAAAGAAGA+GGG - chr2_1:44703339-44703358 Msa0208710:intron 35.0%
TTAGTGTATACGGAAATTGG+AGG - chr2_1:44704440-44704459 Msa0208710:intron 35.0%
! ATTCCTAATAATGCCCCTTT+TGG - chr2_1:44704607-44704626 Msa0208710:intron 35.0%
! TTCTTGGTTTGATTGAACAC+AGG - chr2_1:44704666-44704685 Msa0208710:intron 35.0%
AAATGGACACTTGGAATTTC+AGG - chr2_1:44704707-44704726 Msa0208710:intron 35.0%
CTCATTAATCTTAGTGACAC+CGG + chr2_1:44704954-44704973 None:intergenic 35.0%
!! CAATACTGTATGGCCATTTT+TGG + chr2_1:44705014-44705033 None:intergenic 35.0%
CGAAAGCAAACAATACTGTA+TGG + chr2_1:44705024-44705043 None:intergenic 35.0%
ACATGAATGAAGAGTTCTGT+AGG + chr2_1:44705189-44705208 None:intergenic 35.0%
!!! TAGACAGGTTTTATTGCTGT+TGG + chr2_1:44705268-44705287 None:intergenic 35.0%
AACAGTATCGTAGATGAACA+CGG + chr2_1:44705330-44705349 None:intergenic 35.0%
ATTATCAGAATTGACAGTCC+TGG - chr2_1:44705457-44705476 Msa0208710:intron 35.0%
TACCAGAACTTACAAATCAG+AGG + chr2_1:44705497-44705516 None:intergenic 35.0%
!! TCCACTTTTGGTCCATTTTA+CGG - chr2_1:44705841-44705860 Msa0208710:intron 35.0%
! CCTAAAGTTTCTTCACCTTT+TGG + chr2_1:44705905-44705924 None:intergenic 35.0%
CCAAAAGGTGAAGAAACTTT+AGG - chr2_1:44705902-44705921 Msa0208710:intron 35.0%
!! AGCCTACTTTTAAACTTGAG+AGG - chr2_1:44705973-44705992 Msa0208710:intron 35.0%
!! TGCATCTGGAATTTTTACCA+TGG - chr2_1:44706039-44706058 Msa0208710:intron 35.0%
!! TCTGGAATTTTTACCATGGA+TGG - chr2_1:44706043-44706062 Msa0208710:intron 35.0%
TTACCATGGATGGAATTGTT+AGG - chr2_1:44706053-44706072 Msa0208710:intron 35.0%
! TATTTTGTATCACGGTGCTT+AGG - chr2_1:44706138-44706157 Msa0208710:intron 35.0%
TTAGGATGTGGAGAGAAATT+CGG - chr2_1:44706156-44706175 Msa0208710:intron 35.0%
AAAACCAGTCATTGCTTCAA+TGG - chr2_1:44706193-44706212 Msa0208710:intron 35.0%
! CTTACGTTAACTGGTTCAAT+TGG - chr2_1:44706281-44706300 Msa0208710:intron 35.0%
TTGTTTCGGTAGGTGAATAT+AGG - chr2_1:44706332-44706351 Msa0208710:intron 35.0%
AAAATCATTCATGCACATGG+TGG - chr2_1:44706404-44706423 Msa0208710:intron 35.0%
CAATGATCAGTCTCAGTAAA+TGG - chr2_1:44706521-44706540 Msa0208710:intron 35.0%
!!! TCTCAGTTTTGTTCTCCTTA+TGG + chr2_1:44706750-44706769 None:intergenic 35.0%
TCACTGTACAAAATGAACAG+TGG - chr2_1:44706894-44706913 Msa0208710:intron 35.0%
ATGACACAAGAGAAACAATG+AGG - chr2_1:44706949-44706968 Msa0208710:intron 35.0%
ATGGAGATAAACATGGGTTT+CGG - chr2_1:44707038-44707057 Msa0208710:intron 35.0%
GGTTTCAACAATTGGATTTC+TGG - chr2_1:44707059-44707078 Msa0208710:intron 35.0%
! TTCAACAATTGGATTTCTGG+TGG - chr2_1:44707062-44707081 Msa0208710:intron 35.0%
ATGATCTCACCAAATTGTGT+AGG + chr2_1:44707156-44707175 None:intergenic 35.0%
AAGCATGATAGTCAAAACTG+TGG + chr2_1:44707232-44707251 None:intergenic 35.0%
GCTGAAGAGATTTCAAAAGA+AGG + chr2_1:44707287-44707306 None:intergenic 35.0%
!! TGGAAAAAGCATTGTAGAAC+AGG + chr2_1:44707405-44707424 None:intergenic 35.0%
GCATTCGGCTATATATCATT+TGG + chr2_1:44707570-44707589 None:intergenic 35.0%
CTAATTATTCATTCGACCTC+TGG - chr2_1:44707589-44707608 Msa0208710:intron 35.0%
TTATTTAGTATCTCAGCTGC+CGG - chr2_1:44707829-44707848 Msa0208710:intron 35.0%
! TCGTTGGGTTAGAATCTATT+TGG + chr2_1:44707899-44707918 None:intergenic 35.0%
GATTCTAACCCAACGAAAAT+TGG - chr2_1:44707903-44707922 Msa0208710:intron 35.0%
! AAACAGCATTTTGTGTACTC+AGG + chr2_1:44708420-44708439 None:intergenic 35.0%
!! ATATCGAGGTTGTTAGTCTT+TGG - chr2_1:44708498-44708517 Msa0208710:intron 35.0%
TAATTAGTCGATCTCCATCT+TGG - chr2_1:44708595-44708614 Msa0208710:intron 35.0%
ACACACTGGAGAAAAGAATT+AGG + chr2_1:44708633-44708652 None:intergenic 35.0%
TACAAGTTACAAGTTCAACC+TGG - chr2_1:44708858-44708877 Msa0208710:intron 35.0%
ACAAGTTACAAGTTCAACCT+GGG - chr2_1:44708859-44708878 Msa0208710:intron 35.0%
ATATGCATTCTGTGCAGATT+TGG + chr2_1:44708994-44709013 None:intergenic 35.0%
!! ACAACTACTTTTCTCAACCT+AGG - chr2_1:44709130-44709149 Msa0208710:intron 35.0%
!! ATTTTGCTATGGCAATAGCT+CGG + chr2_1:44709247-44709266 None:intergenic 35.0%
!!! ATTGGCCTTCAATTTTGCTA+TGG + chr2_1:44709258-44709277 None:intergenic 35.0%
TTAAAATCTACAGGGAACTG+AGG + chr2_1:44709606-44709625 None:intergenic 35.0%
!! TCTCTTGGTACTTTTTGGTA+CGG - chr2_1:44709892-44709911 Msa0208710:five_prime_UTR 35.0%
! TTGAACCTATTACTGGTTGG+AGG - chr2_1:44699365-44699384 Msa0208710:CDS 40.0%
TTGGAGGAATTTCGTCGTTA+AGG - chr2_1:44699381-44699400 Msa0208710:CDS 40.0%
GTTCTTACAATGAAGCTTCG+TGG - chr2_1:44699451-44699470 Msa0208710:CDS 40.0%
GTAAAGGAAAGAAGGAAACC+TGG + chr2_1:44699477-44699496 None:intergenic 40.0%
! AGGTGATTTGGCAGAATACA+CGG + chr2_1:44699651-44699670 None:intergenic 40.0%
TCTGCCAAATCACCTAATAG+AGG - chr2_1:44699656-44699675 Msa0208710:CDS 40.0%
TCCACCTCTATTAGGTGATT+TGG + chr2_1:44699663-44699682 None:intergenic 40.0%
TAAGTGACATAGGCCTGATT+TGG - chr2_1:44699830-44699849 Msa0208710:CDS 40.0%
AGCCAATTCAAATAGGCACA+TGG - chr2_1:44700107-44700126 Msa0208710:intron 40.0%
AGTGAAGAGTAGATTCTCTC+CGG - chr2_1:44700578-44700597 Msa0208710:intron 40.0%
! ATTTGAGGTAGAGAAAGTCC+CGG + chr2_1:44700600-44700619 None:intergenic 40.0%
CCTATGATCCTCGAATTTCT+GGG - chr2_1:44700643-44700662 Msa0208710:intron 40.0%
CTATGATCCTCGAATTTCTG+GGG - chr2_1:44700644-44700663 Msa0208710:intron 40.0%
GATAGTTTAAACTGTGGGTG+GGG - chr2_1:44700681-44700700 Msa0208710:intron 40.0%
!!! GGATGAAGCCTGTTATTTTC+TGG - chr2_1:44701365-44701384 Msa0208710:intron 40.0%
CAAGTATCAATGCACGTTAG+AGG + chr2_1:44701455-44701474 None:intergenic 40.0%
AGAAAAGTAAGCACTTGGAG+GGG + chr2_1:44701569-44701588 None:intergenic 40.0%
! TGGTAATTTCGAGGTTTTCG+TGG - chr2_1:44701726-44701745 Msa0208710:intron 40.0%
! GGTAATTTCGAGGTTTTCGT+GGG - chr2_1:44701727-44701746 Msa0208710:intron 40.0%
ATCAACTGACCAAACCAGAT+TGG - chr2_1:44702468-44702487 Msa0208710:intron 40.0%
AATGTAGGACCAATCTGGTT+TGG + chr2_1:44702480-44702499 None:intergenic 40.0%
! AGTATTATGACGGAGAGAGT+AGG - chr2_1:44702624-44702643 Msa0208710:CDS 40.0%
TATAGAAGGGGAATGATACC+TGG - chr2_1:44702647-44702666 Msa0208710:CDS 40.0%
TACAGAATTACCAGACTACC+AGG + chr2_1:44702668-44702687 None:intergenic 40.0%
!! ATATGAAGTACTGGACTACC+AGG + chr2_1:44702723-44702742 None:intergenic 40.0%
! TTGAGACACTAGCATTGGAA+TGG + chr2_1:44702860-44702879 None:intergenic 40.0%
! ATTGGCAAGTACAAAAGTGC+AGG - chr2_1:44703084-44703103 Msa0208710:intron 40.0%
GATAAAGTCTCTTCTGCCAA+AGG - chr2_1:44703192-44703211 Msa0208710:intron 40.0%
ACGGGTAGAAATTTCTTCAG+AGG - chr2_1:44703787-44703806 Msa0208710:intron 40.0%
!! GATCTAAGTAGCGGATTTCT+AGG - chr2_1:44704089-44704108 Msa0208710:CDS 40.0%
!! TGGAAGATGACGGAATCAAT+AGG + chr2_1:44704145-44704164 None:intergenic 40.0%
ATGCACTATGTGGAAGATGA+CGG + chr2_1:44704155-44704174 None:intergenic 40.0%
!! TCACCAAAAGGGGCATTATT+AGG + chr2_1:44704613-44704632 None:intergenic 40.0%
TTGAACACAGGAAATACTCC+CGG - chr2_1:44704678-44704697 Msa0208710:intron 40.0%
AAGAACTGATAGCCATCATC+CGG - chr2_1:44704735-44704754 Msa0208710:intron 40.0%
ACATTGACAAAGGCAAGAAC+AGG - chr2_1:44705057-44705076 Msa0208710:intron 40.0%
! TGCCTCTGATTTGTAAGTTC+TGG - chr2_1:44705492-44705511 Msa0208710:CDS 40.0%
! ACAATTGGTCACTCCACTTT+TGG - chr2_1:44705829-44705848 Msa0208710:intron 40.0%
! TTTCTGAGAATGGCCACAAT+TGG + chr2_1:44705875-44705894 None:intergenic 40.0%
!! TGGTCCTTCTTTTCTGAGAA+TGG + chr2_1:44705885-44705904 None:intergenic 40.0%
CTCAGAAAAGAAGGACCAAA+AGG - chr2_1:44705887-44705906 Msa0208710:intron 40.0%
AAGCCTAACAATTCCATCCA+TGG + chr2_1:44706059-44706078 None:intergenic 40.0%
GCAGAAAGTCTTACGTTAAC+TGG - chr2_1:44706272-44706291 Msa0208710:intron 40.0%
! GTTAACTGGTTCAATTGGAG+TGG - chr2_1:44706286-44706305 Msa0208710:intron 40.0%
!! CGGTGTTTTATTGTTTCGGT+AGG - chr2_1:44706322-44706341 Msa0208710:intron 40.0%
GGTAGGTGAATATAGGAGAA+GGG - chr2_1:44706339-44706358 Msa0208710:intron 40.0%
!! AGAATTTGGAAGCCTTGTTG+AGG - chr2_1:44706491-44706510 Msa0208710:intron 40.0%
GAGAACAAAACTGAGAACAG+AGG - chr2_1:44706754-44706773 Msa0208710:intron 40.0%
CATGTGTGACAGTGTTTCAT+GGG + chr2_1:44706932-44706951 None:intergenic 40.0%
TCATGTGTGACAGTGTTTCA+TGG + chr2_1:44706933-44706952 None:intergenic 40.0%
GTTGTTTGGGAAGAAATGCT+TGG - chr2_1:44706977-44706996 Msa0208710:intron 40.0%
TGGGTTTCGGTTTCAACAAT+TGG - chr2_1:44707051-44707070 Msa0208710:intron 40.0%
!! TGGTAAACCTGCTTTTGGTT+AGG - chr2_1:44707082-44707101 Msa0208710:intron 40.0%
CGCAATGATCCTACACAATT+TGG - chr2_1:44707144-44707163 Msa0208710:intron 40.0%
ACACGATCCTGATCATATTC+TGG + chr2_1:44707181-44707200 None:intergenic 40.0%
AGAATATGATCAGGATCGTG+TGG - chr2_1:44707180-44707199 Msa0208710:intron 40.0%
GAATATGATCAGGATCGTGT+GGG - chr2_1:44707181-44707200 Msa0208710:intron 40.0%
AAAGAAGGAAAGGTCGCTAT+AGG + chr2_1:44707272-44707291 None:intergenic 40.0%
! TGTAGAACAGGTTTTCCTCT+CGG + chr2_1:44707393-44707412 None:intergenic 40.0%
AGGAGGAAATCTGCCTTTAT+AGG - chr2_1:44707438-44707457 Msa0208710:intron 40.0%
GTACTGTTGTTGATCTCTGT+AGG - chr2_1:44707500-44707519 Msa0208710:intron 40.0%
!! ATTCGACCTCTGGAATAATG+AGG - chr2_1:44707599-44707618 Msa0208710:intron 40.0%
TCTTCTCATACAGTTTCGCT+AGG + chr2_1:44707727-44707746 None:intergenic 40.0%
GCGAAACTGTATGAGAAGAT+TGG - chr2_1:44707728-44707747 Msa0208710:intron 40.0%
!! TATTGATTTGAGGACCTCTC+AGG - chr2_1:44708106-44708125 Msa0208710:intron 40.0%
!! ATTGATTTGAGGACCTCTCA+GGG - chr2_1:44708107-44708126 Msa0208710:intron 40.0%
AGTGCAAACTGCAAACACAT+TGG + chr2_1:44708171-44708190 None:intergenic 40.0%
! AGCATTTTGTGTACTCAGGT+GGG + chr2_1:44708416-44708435 None:intergenic 40.0%
GGCATATATCCAAACCAAGA+TGG + chr2_1:44708612-44708631 None:intergenic 40.0%
CAAGTTACAAGTTCAACCTG+GGG - chr2_1:44708860-44708879 Msa0208710:intron 40.0%
TAAGTGGAAGGAAGAACTCT+CGG + chr2_1:44708889-44708908 None:intergenic 40.0%
ATCTGGCCTGTAAGAAAGAA+AGG + chr2_1:44708955-44708974 None:intergenic 40.0%
AGAACGTACAGTCATAGATC+TGG + chr2_1:44709045-44709064 None:intergenic 40.0%
!! ACTACTTTTCTCAACCTAGG+TGG - chr2_1:44709133-44709152 Msa0208710:intron 40.0%
!! CATGGTTTGGTTGATGCTAT+TGG - chr2_1:44709212-44709231 Msa0208710:intron 40.0%
!! TTTTGCTATGGCAATAGCTC+GGG + chr2_1:44709246-44709265 None:intergenic 40.0%
ATTGAAGGCCAATATACCTC+AGG - chr2_1:44709265-44709284 Msa0208710:intron 40.0%
ATATCTCCACAACAGTTACC+TGG + chr2_1:44709387-44709406 None:intergenic 40.0%
! CTGAGATTTTATTAGGCGCA+CGG - chr2_1:44709428-44709447 Msa0208710:CDS 40.0%
TTTCTGATGGAGTTCAAGCT+AGG - chr2_1:44709506-44709525 Msa0208710:CDS 40.0%
AGTGAAGTGATGAGCTGACA+AGG + chr2_1:44698976-44698995 None:intergenic 45.0%
AATTAACGGAAGAGAGGGAG+AGG + chr2_1:44699040-44699059 None:intergenic 45.0%
!! ATGATGATAAGGTGTTGCGG+CGG + chr2_1:44699144-44699163 None:intergenic 45.0%
AGTTTGGGGAAGAGAGTGAA+AGG + chr2_1:44699212-44699231 None:intergenic 45.0%
!!! TTCTTCGATTTTGGTGTCGG+AGG + chr2_1:44699278-44699297 None:intergenic 45.0%
GCTGATGAAGATTATCCCAG+TGG - chr2_1:44699331-44699350 Msa0208710:CDS 45.0%
AGATGCTCATTGCGTATCCA+TGG - chr2_1:44699407-44699426 Msa0208710:CDS 45.0%
GATGCTCATTGCGTATCCAT+GGG - chr2_1:44699408-44699427 Msa0208710:CDS 45.0%
GCCAAATCACCTAATAGAGG+TGG - chr2_1:44699659-44699678 Msa0208710:CDS 45.0%
AAGGTTGTTGCCTTGTGAGT+TGG - chr2_1:44700324-44700343 Msa0208710:intron 45.0%
TAGAAACAGCTTTCCGCTTG+CGG - chr2_1:44700366-44700385 Msa0208710:intron 45.0%
GTGAAGAGTAGATTCTCTCC+GGG - chr2_1:44700579-44700598 Msa0208710:intron 45.0%
GCCTATGATCCTCGAATTTC+TGG - chr2_1:44700642-44700661 Msa0208710:intron 45.0%
CCCAGAAATTCGAGGATCAT+AGG + chr2_1:44700646-44700665 None:intergenic 45.0%
AGATAGACCCCAGAAATTCG+AGG + chr2_1:44700654-44700673 None:intergenic 45.0%
! TTATGCATTGGCAGCCAAGT+AGG + chr2_1:44700993-44701012 None:intergenic 45.0%
CTGAAATGGCCTTCAGTAGA+AGG - chr2_1:44701300-44701319 Msa0208710:intron 45.0%
CTGGGATTGTGATGTAACTG+AGG - chr2_1:44701384-44701403 Msa0208710:intron 45.0%
! ATTTCGAGGTTTTCGTGGGA+TGG - chr2_1:44701731-44701750 Msa0208710:intron 45.0%
! TTTCGAGGTTTTCGTGGGAT+GGG - chr2_1:44701732-44701751 Msa0208710:intron 45.0%
TGTATAATGTAGGCTGGGTC+AGG - chr2_1:44701851-44701870 Msa0208710:intron 45.0%
TAGATCTGACCCAAATGGCT+TGG - chr2_1:44702435-44702454 Msa0208710:intron 45.0%
AGATCTGACCCAAATGGCTT+GGG - chr2_1:44702436-44702455 Msa0208710:intron 45.0%
TTACAAGAGGCTGGAACTGA+TGG + chr2_1:44702543-44702562 None:intergenic 45.0%
ACGGAGAGAGTAGGTATAGA+AGG - chr2_1:44702633-44702652 Msa0208710:CDS 45.0%
CGGAGAGAGTAGGTATAGAA+GGG - chr2_1:44702634-44702653 Msa0208710:CDS 45.0%
GGAGAGAGTAGGTATAGAAG+GGG - chr2_1:44702635-44702654 Msa0208710:CDS 45.0%
AATAGGAGTTGAACCGCAAG+TGG - chr2_1:44703056-44703075 Msa0208710:intron 45.0%
TTGCCAATCCTTTCCACTTG+CGG + chr2_1:44703072-44703091 None:intergenic 45.0%
GCAGGTTACTGACATGTTGA+AGG - chr2_1:44703719-44703738 Msa0208710:intron 45.0%
GACATGTTGAAGGAGAGACT+TGG - chr2_1:44703729-44703748 Msa0208710:intron 45.0%
AAACTGCCAACGGTCGATTA+CGG - chr2_1:44703768-44703787 Msa0208710:intron 45.0%
TCCACCTCTATGCTTCAACA+GGG - chr2_1:44704029-44704048 Msa0208710:CDS 45.0%
ACATCCCTGTTGAAGCATAG+AGG + chr2_1:44704036-44704055 None:intergenic 45.0%
AGCTGCAATGATGCACTATG+TGG + chr2_1:44704165-44704184 None:intergenic 45.0%
! CTTTGTCCTGGTTCTTTCTG+TGG - chr2_1:44704523-44704542 Msa0208710:intron 45.0%
CATAAGCCACAGAAAGAACC+AGG + chr2_1:44704532-44704551 None:intergenic 45.0%
TGAACACAGGAAATACTCCC+GGG - chr2_1:44704679-44704698 Msa0208710:intron 45.0%
! AATACTCCCGGGTTAGGAAA+TGG - chr2_1:44704690-44704709 Msa0208710:intron 45.0%
AAGTGTCCATTTCCTAACCC+GGG + chr2_1:44704699-44704718 None:intergenic 45.0%
CAAGTGTCCATTTCCTAACC+CGG + chr2_1:44704700-44704719 None:intergenic 45.0%
TGGACACTTGGAATTTCAGG+TGG - chr2_1:44704710-44704729 Msa0208710:intron 45.0%
AGAACTGATAGCCATCATCC+GGG - chr2_1:44704736-44704755 Msa0208710:intron 45.0%
!! AGGGAGCATTAGTCGAGTTA+AGG - chr2_1:44704763-44704782 Msa0208710:intron 45.0%
!! GGGAGCATTAGTCGAGTTAA+GGG - chr2_1:44704764-44704783 Msa0208710:intron 45.0%
! CAGTTAAGTGTCTCTAGCTC+AGG - chr2_1:44704788-44704807 Msa0208710:intron 45.0%
ATCAGAATTGACAGTCCTGG+AGG - chr2_1:44705460-44705479 Msa0208710:intron 45.0%
GCCGTAAAATGGACCAAAAG+TGG + chr2_1:44705845-44705864 None:intergenic 45.0%
! TTTGGTCCATTTTACGGCTG+AGG - chr2_1:44705847-44705866 Msa0208710:intron 45.0%
! TTGGTCCATTTTACGGCTGA+GGG - chr2_1:44705848-44705867 Msa0208710:intron 45.0%
GTGGCCATTCTCAGAAAAGA+AGG - chr2_1:44705878-44705897 Msa0208710:intron 45.0%
TCAGCCATTGAAGCAATGAC+TGG + chr2_1:44706200-44706219 None:intergenic 45.0%
CATTGCTTCAATGGCTGATG+TGG - chr2_1:44706202-44706221 Msa0208710:intron 45.0%
AGCAAGTGGAGGATACTACA+TGG - chr2_1:44706226-44706245 Msa0208710:intron 45.0%
TGGAGGATACTACATGGCAA+TGG - chr2_1:44706232-44706251 Msa0208710:intron 45.0%
GGAGGATACTACATGGCAAT+GGG - chr2_1:44706233-44706252 Msa0208710:intron 45.0%
CGGTAGGTGAATATAGGAGA+AGG - chr2_1:44706338-44706357 Msa0208710:intron 45.0%
CTGTCGAGACACTAAAGCAA+TGG + chr2_1:44706551-44706570 None:intergenic 45.0%
!! CAGCATCAAAGGTTGGTTTG+GGG + chr2_1:44706829-44706848 None:intergenic 45.0%
!! GCAGCATCAAAGGTTGGTTT+GGG + chr2_1:44706830-44706849 None:intergenic 45.0%
! TGCAGCATCAAAGGTTGGTT+TGG + chr2_1:44706831-44706850 None:intergenic 45.0%
ACTACTGCAGCATCAAAGGT+TGG + chr2_1:44706836-44706855 None:intergenic 45.0%
TCGTACTACTGCAGCATCAA+AGG + chr2_1:44706840-44706859 None:intergenic 45.0%
TGGGAAGAAATGCTTGGAAG+AGG - chr2_1:44706983-44707002 Msa0208710:intron 45.0%
GGGAAGAAATGCTTGGAAGA+GGG - chr2_1:44706984-44707003 Msa0208710:intron 45.0%
TTGGAAGAGGGTTAGATAGC+AGG - chr2_1:44706996-44707015 Msa0208710:intron 45.0%
TGGAAGAGGGTTAGATAGCA+GGG - chr2_1:44706997-44707016 Msa0208710:intron 45.0%
! TCTGGTGGTAAACCTGCTTT+TGG - chr2_1:44707077-44707096 Msa0208710:intron 45.0%
TGTCATGCCTAACCAAAAGC+AGG + chr2_1:44707092-44707111 None:intergenic 45.0%
TCTGCTTACTTTCTACCGAG+AGG - chr2_1:44707375-44707394 Msa0208710:intron 45.0%
GTCTTGCCTCATTATTCCAG+AGG + chr2_1:44707608-44707627 None:intergenic 45.0%
!! GTGCTGATCAGCGTTCTTTT+AGG - chr2_1:44707798-44707817 Msa0208710:intron 45.0%
!! TCCTTCTCAAAGAGAGTGTC+CGG + chr2_1:44707851-44707870 None:intergenic 45.0%
ACCCAACGAAAATTGGCTGA+TGG - chr2_1:44707910-44707929 Msa0208710:intron 45.0%
! GCCATCAGCCAATTTTCGTT+GGG + chr2_1:44707914-44707933 None:intergenic 45.0%
! TGCCATCAGCCAATTTTCGT+TGG + chr2_1:44707915-44707934 None:intergenic 45.0%
GTGGACTTCCTTCAAGCTAT+AGG - chr2_1:44708047-44708066 Msa0208710:intron 45.0%
TTCTGTACGAAATCCCTGAG+AGG + chr2_1:44708123-44708142 None:intergenic 45.0%
! CAGCATTTTGTGTACTCAGG+TGG + chr2_1:44708417-44708436 None:intergenic 45.0%
AGTCGATCTCCATCTTGGTT+TGG - chr2_1:44708600-44708619 Msa0208710:intron 45.0%
TGCAGGGCTTACCATATATG+TGG - chr2_1:44708672-44708691 Msa0208710:intron 45.0%
! GCAAATAGCTCTGCTTCATC+TGG + chr2_1:44708972-44708991 None:intergenic 45.0%
GGTAAAGATGCAGCATCACA+TGG - chr2_1:44709194-44709213 Msa0208710:intron 45.0%
AGATGCAGCATCACATGGTT+TGG - chr2_1:44709199-44709218 Msa0208710:intron 45.0%
! GGTTTGGTTGATGCTATTGG+TGG - chr2_1:44709215-44709234 Msa0208710:intron 45.0%
CTGTTCGTCCTGAGGTATAT+TGG + chr2_1:44709276-44709295 None:intergenic 45.0%
CAATATACCTCAGGACGAAC+AGG - chr2_1:44709274-44709293 Msa0208710:intron 45.0%
TAACTAACCTGTTCGTCCTG+AGG + chr2_1:44709284-44709303 None:intergenic 45.0%
CGTGCGCCTAATAAAATCTC+AGG + chr2_1:44709430-44709449 None:intergenic 45.0%
CTTCAACGTGCTTTCAACTC+CGG + chr2_1:44709464-44709483 None:intergenic 45.0%
ACGTTGAAGGAACTGCTACA+GGG - chr2_1:44709475-44709494 Msa0208710:CDS 45.0%
! CAGGGGTTGACATTTTCTGA+TGG - chr2_1:44709493-44709512 Msa0208710:CDS 45.0%
TGATGGAGTTCAAGCTAGGA+TGG - chr2_1:44709510-44709529 Msa0208710:CDS 45.0%
GACAAAATGGGGTTGTCGTT+GGG + chr2_1:44709568-44709587 None:intergenic 45.0%
TGACAAAATGGGGTTGTCGT+TGG + chr2_1:44709569-44709588 None:intergenic 45.0%
TGTACGTACAGTGATTGCGA+GGG + chr2_1:44709728-44709747 None:intergenic 45.0%
ATGTACGTACAGTGATTGCG+AGG + chr2_1:44709729-44709748 None:intergenic 45.0%
TATGCCTGGATTGTCTCATC+TGG - chr2_1:44709804-44709823 Msa0208710:five_prime_UTR 45.0%
AAGTCCAGATGAGACAATCC+AGG + chr2_1:44709811-44709830 None:intergenic 45.0%
TGTCTCATCTGGACTTCTGT+AGG - chr2_1:44709815-44709834 Msa0208710:intron 45.0%
GTCTCATCTGGACTTCTGTA+GGG - chr2_1:44709816-44709835 Msa0208710:intron 45.0%
TCTCATCTGGACTTCTGTAG+GGG - chr2_1:44709817-44709836 Msa0208710:intron 45.0%
!! ATAAATATTATATGTATATT+TGG - chr2_1:44702312-44702331 Msa0208710:intron 5.0%
!!! AAATTATAACTTTTTATTTT+AGG - chr2_1:44704352-44704371 Msa0208710:intron 5.0%
!! TACTTTATATTAATAATAAT+AGG + chr2_1:44707954-44707973 None:intergenic 5.0%
! GGAAGAATCAAAGGCGCGAA+GGG + chr2_1:44699257-44699276 None:intergenic 50.0%
! AGGAAGAATCAAAGGCGCGA+AGG + chr2_1:44699258-44699277 None:intergenic 50.0%
! GGTGTCGGAGGAAGAATCAA+AGG + chr2_1:44699266-44699285 None:intergenic 50.0%
CCTTTACGAACACGTTCCCA+TGG + chr2_1:44699427-44699446 None:intergenic 50.0%
CCATGGGAACGTGTTCGTAA+AGG - chr2_1:44699424-44699443 Msa0208710:CDS 50.0%
TACAATGAAGCTTCGTGGCC+AGG - chr2_1:44699456-44699475 Msa0208710:CDS 50.0%
! GTTGTTGCCTTGTGAGTTGG+AGG - chr2_1:44700327-44700346 Msa0208710:intron 50.0%
CTCATGACCTCCAACTCACA+AGG + chr2_1:44700337-44700356 None:intergenic 50.0%
!! GCAAGCGGAAAGCTGTTTCT+AGG + chr2_1:44700367-44700386 None:intergenic 50.0%
AGAAACAGCTTTCCGCTTGC+GGG - chr2_1:44700367-44700386 Msa0208710:intron 50.0%
CATGGGTGATTAAGCACACG+AGG + chr2_1:44700411-44700430 None:intergenic 50.0%
GTTCAAGCCTCATTCCTCAG+AGG - chr2_1:44701604-44701623 Msa0208710:intron 50.0%
! CAGCTTACCTCTGAGGAATG+AGG + chr2_1:44701614-44701633 None:intergenic 50.0%
CTCATTCCTCAGAGGTAAGC+TGG - chr2_1:44701612-44701631 Msa0208710:intron 50.0%
GAAAGACCAGCTTACCTCTG+AGG + chr2_1:44701621-44701640 None:intergenic 50.0%
! TGACCCAAATGGCTTGGGTT+GGG - chr2_1:44702441-44702460 Msa0208710:intron 50.0%
AAGCCCAACCCAAGCCATTT+GGG + chr2_1:44702447-44702466 None:intergenic 50.0%
GGGAATGATACCTGGTAGTC+TGG - chr2_1:44702655-44702674 Msa0208710:CDS 50.0%
GAGTTGAACCGCAAGTGGAA+AGG - chr2_1:44703061-44703080 Msa0208710:intron 50.0%
GAACCGCAAGTGGAAAGGAT+TGG - chr2_1:44703066-44703085 Msa0208710:intron 50.0%
AACTGCCAACGGTCGATTAC+GGG - chr2_1:44703769-44703788 Msa0208710:intron 50.0%
TTCTACCCGTAATCGACCGT+TGG + chr2_1:44703777-44703796 None:intergenic 50.0%
CTGTTGAAGCATAGAGGTGG+AGG + chr2_1:44704030-44704049 None:intergenic 50.0%
CTCCACCTCTATGCTTCAAC+AGG - chr2_1:44704028-44704047 Msa0208710:CDS 50.0%
TCCCTGTTGAAGCATAGAGG+TGG + chr2_1:44704033-44704052 None:intergenic 50.0%
ACAGGAAATACTCCCGGGTT+AGG - chr2_1:44704684-44704703 Msa0208710:intron 50.0%
! CGGGTTAGGAAATGGACACT+TGG - chr2_1:44704698-44704717 Msa0208710:intron 50.0%
AACTCGACTAATGCTCCCTG+AGG + chr2_1:44704762-44704781 None:intergenic 50.0%
GAGAAGATTCGCACTGTCAG+AGG - chr2_1:44704833-44704852 Msa0208710:intron 50.0%
GAAACAGGATGCTAGGACTG+AGG - chr2_1:44705091-44705110 Msa0208710:CDS 50.0%
TTGGTCCCTCAGCCGTAAAA+TGG + chr2_1:44705856-44705875 None:intergenic 50.0%
GTATCACGGTGCTTAGGATG+TGG - chr2_1:44706144-44706163 Msa0208710:intron 50.0%
GGTTCAATTGGAGTGGTCAC+AGG - chr2_1:44706293-44706312 Msa0208710:intron 50.0%
GGAGTGGTCACAGGTAATCA+CGG - chr2_1:44706302-44706321 Msa0208710:intron 50.0%
!!! GGGGCTACAGGATTTTGGTT+TGG + chr2_1:44706810-44706829 None:intergenic 50.0%
!! GGTTTGGGGCTACAGGATTT+TGG + chr2_1:44706815-44706834 None:intergenic 50.0%
!! AAAGGTTGGTTTGGGGCTAC+AGG + chr2_1:44706822-44706841 None:intergenic 50.0%
TTCACGCGCCGTTAATATCG+AGG - chr2_1:44708484-44708503 Msa0208710:intron 50.0%
GTTACAAGTTCAACCTGGGG+AGG - chr2_1:44708863-44708882 Msa0208710:intron 50.0%
CTCAACCTAGGTGGACAAGA+TGG - chr2_1:44709142-44709161 Msa0208710:intron 50.0%
AACCTAGGTGGACAAGATGG+AGG - chr2_1:44709145-44709164 Msa0208710:intron 50.0%
AAGATGGAGGAGGTAGCACA+GGG - chr2_1:44709158-44709177 Msa0208710:intron 50.0%
AGGTAGCACAGGGTAGAGTT+TGG - chr2_1:44709168-44709187 Msa0208710:intron 50.0%
CTATGGCAATAGCTCGGGAA+AGG + chr2_1:44709241-44709260 None:intergenic 50.0%
GACTTTGCTTGTGCTATGCC+AGG - chr2_1:44709366-44709385 Msa0208710:intron 50.0%
GCTATGCCAGGTAACTGTTG+TGG - chr2_1:44709378-44709397 Msa0208710:intron 50.0%
AGGTAGAGAGGGACTAGATC+TGG + chr2_1:44709410-44709429 None:intergenic 50.0%
CGTGCTTTCAACTCCGGTTA+GGG + chr2_1:44709458-44709477 None:intergenic 50.0%
ACGTGCTTTCAACTCCGGTT+AGG + chr2_1:44709459-44709478 None:intergenic 50.0%
! CGGAGTTGAAAGCACGTTGA+AGG - chr2_1:44709462-44709481 Msa0208710:CDS 50.0%
CACGTTGAAGGAACTGCTAC+AGG - chr2_1:44709474-44709493 Msa0208710:CDS 50.0%
CGTTGAAGGAACTGCTACAG+GGG - chr2_1:44709476-44709495 Msa0208710:CDS 50.0%
GGAGTTCAAGCTAGGATGGA+TGG - chr2_1:44709514-44709533 Msa0208710:CDS 50.0%
GTACGTACAGTGATTGCGAG+GGG + chr2_1:44709727-44709746 None:intergenic 50.0%
!! TAAGGTGTTGCGGCGGTAGA+GGG + chr2_1:44699137-44699156 None:intergenic 55.0%
!! ATAAGGTGTTGCGGCGGTAG+AGG + chr2_1:44699138-44699157 None:intergenic 55.0%
GGCTGCCAATGCATAAGCCA+TGG - chr2_1:44701177-44701196 Msa0208710:intron 55.0%
TCTCTTCACATGCACACGCG+AGG + chr2_1:44701540-44701559 None:intergenic 55.0%
! CTGACCCAAATGGCTTGGGT+TGG - chr2_1:44702440-44702459 Msa0208710:intron 55.0%
CAAGCCCAACCCAAGCCATT+TGG + chr2_1:44702448-44702467 None:intergenic 55.0%
! CTCTAGCTCAGGCATCACTG+CGG - chr2_1:44704799-44704818 Msa0208710:intron 55.0%
TACGGCTGAGGGACCAATTG+TGG - chr2_1:44705859-44705878 Msa0208710:intron 55.0%
ATGGCTGATGTGGCAGCAAG+TGG - chr2_1:44706212-44706231 Msa0208710:intron 55.0%
CATTGCTCAGCGCCTCAACA+AGG + chr2_1:44706506-44706525 None:intergenic 55.0%
! GCCGGACACTCTCTTTGAGA+AGG - chr2_1:44707847-44707866 Msa0208710:intron 55.0%
CTCCTCCATCTTGTCCACCT+AGG + chr2_1:44709150-44709169 None:intergenic 55.0%
CTAGGTGGACAAGATGGAGG+AGG - chr2_1:44709148-44709167 Msa0208710:intron 55.0%
CAAGATGGAGGAGGTAGCAC+AGG - chr2_1:44709157-44709176 Msa0208710:intron 55.0%
GCACAGGGTAGAGTTTGGAC+TGG - chr2_1:44709173-44709192 Msa0208710:intron 55.0%
ACACGAGGCTTCCACCAGGT+GGG + chr2_1:44700396-44700415 None:intergenic 60.0%
AAGCACACGAGGCTTCCACC+AGG + chr2_1:44700400-44700419 None:intergenic 60.0%
GTAGGCTGGGTCAGGAACCA+TGG - chr2_1:44701859-44701878 Msa0208710:intron 60.0%
ATAGCCATCATCCGGGCCTC+AGG - chr2_1:44704743-44704762 Msa0208710:intron 60.0%
TAGCCATCATCCGGGCCTCA+GGG - chr2_1:44704744-44704763 Msa0208710:intron 60.0%
GACTAATGCTCCCTGAGGCC+CGG + chr2_1:44704757-44704776 None:intergenic 60.0%
TAGCTCAGGCATCACTGCGG+AGG - chr2_1:44704802-44704821 Msa0208710:intron 60.0%
GCTGATGTGGCAGCAAGTGG+AGG - chr2_1:44706215-44706234 Msa0208710:intron 60.0%
! TAGAGGGAGGTGTGGAGGGG+GGG + chr2_1:44699121-44699140 None:intergenic 65.0%
! GTAGAGGGAGGTGTGGAGGG+GGG + chr2_1:44699122-44699141 None:intergenic 65.0%
! GGTAGAGGGAGGTGTGGAGG+GGG + chr2_1:44699123-44699142 None:intergenic 65.0%
! CGGTAGAGGGAGGTGTGGAG+GGG + chr2_1:44699124-44699143 None:intergenic 65.0%
! GCGGTAGAGGGAGGTGTGGA+GGG + chr2_1:44699125-44699144 None:intergenic 65.0%
ACGAGGCTTCCACCAGGTGG+GGG + chr2_1:44700394-44700413 None:intergenic 65.0%
CACGAGGCTTCCACCAGGTG+GGG + chr2_1:44700395-44700414 None:intergenic 65.0%
CACACGAGGCTTCCACCAGG+TGG + chr2_1:44700397-44700416 None:intergenic 65.0%
!! GAGGCAAGAGCGTCACCTCC+AGG + chr2_1:44705478-44705497 None:intergenic 65.0%
GAAGAACTCTCGGCCTCCCC+AGG + chr2_1:44708879-44708898 None:intergenic 65.0%
GGCGCACGGAGTTCCCTAAC+CGG - chr2_1:44709442-44709461 Msa0208710:CDS 65.0%
! GAGGTGTGGAGGGGGGGTGT+GGG + chr2_1:44699115-44699134 None:intergenic 70.0%
! GGCGGTAGAGGGAGGTGTGG+AGG + chr2_1:44699126-44699145 None:intergenic 70.0%
TGCGGCGGTAGAGGGAGGTG+TGG + chr2_1:44699129-44699148 None:intergenic 70.0%
! GGTGTTGCGGCGGTAGAGGG+AGG + chr2_1:44699134-44699153 None:intergenic 70.0%
GCTCCCTGAGGCCCGGATGA+TGG + chr2_1:44704750-44704769 None:intergenic 70.0%
! GGAGGTGTGGAGGGGGGGTG+TGG + chr2_1:44699116-44699135 None:intergenic 75.0%
CCAGGTGGGGGACCCGCAAG+CGG + chr2_1:44700382-44700401 None:intergenic 75.0%
CTTGCGGGTCCCCCACCTGG+TGG - chr2_1:44700382-44700401 Msa0208710:intron 75.0%
! CCGCTTGCGGGTCCCCCACC+TGG - chr2_1:44700379-44700398 Msa0208710:intron 80.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 44698951 44709928 44698951 ID=Msa0208710;Name=Msa0208710
chr2_1 mRNA 44698951 44709928 44698951 ID=Msa0208710-mRNA-1;Parent=Msa0208710;Name=Msa0208710-mRNA-1;_AED=0.11;_eAED=0.11;_QI=111|1|1|1|0.92|0.85|14|310|669
chr2_1 exon 44698951 44699491 44698951 ID=Msa0208710-mRNA-1:exon:13024;Parent=Msa0208710-mRNA-1
chr2_1 exon 44699584 44699727 44699584 ID=Msa0208710-mRNA-1:exon:13023;Parent=Msa0208710-mRNA-1
chr2_1 exon 44699824 44699911 44699824 ID=Msa0208710-mRNA-1:exon:13022;Parent=Msa0208710-mRNA-1
chr2_1 exon 44701060 44701165 44701060 ID=Msa0208710-mRNA-1:exon:13021;Parent=Msa0208710-mRNA-1
chr2_1 exon 44702565 44702719 44702565 ID=Msa0208710-mRNA-1:exon:13020;Parent=Msa0208710-mRNA-1
chr2_1 exon 44703376 44703445 44703376 ID=Msa0208710-mRNA-1:exon:13019;Parent=Msa0208710-mRNA-1
chr2_1 exon 44704025 44704191 44704025 ID=Msa0208710-mRNA-1:exon:13018;Parent=Msa0208710-mRNA-1
chr2_1 exon 44705089 44705156 44705089 ID=Msa0208710-mRNA-1:exon:13017;Parent=Msa0208710-mRNA-1
chr2_1 exon 44705487 44705590 44705487 ID=Msa0208710-mRNA-1:exon:13016;Parent=Msa0208710-mRNA-1
chr2_1 exon 44705666 44705836 44705666 ID=Msa0208710-mRNA-1:exon:13015;Parent=Msa0208710-mRNA-1
chr2_1 exon 44707254 44707391 44707254 ID=Msa0208710-mRNA-1:exon:13014;Parent=Msa0208710-mRNA-1
chr2_1 exon 44708129 44708312 44708129 ID=Msa0208710-mRNA-1:exon:13013;Parent=Msa0208710-mRNA-1
chr2_1 exon 44709402 44709828 44709402 ID=Msa0208710-mRNA-1:exon:13012;Parent=Msa0208710-mRNA-1
chr2_1 exon 44709861 44709928 44709861 ID=Msa0208710-mRNA-1:exon:13011;Parent=Msa0208710-mRNA-1
chr2_1 five_prime_UTR 44709861 44709928 44709861 ID=Msa0208710-mRNA-1:five_prime_utr;Parent=Msa0208710-mRNA-1
chr2_1 five_prime_UTR 44709786 44709828 44709786 ID=Msa0208710-mRNA-1:five_prime_utr;Parent=Msa0208710-mRNA-1
chr2_1 CDS 44709402 44709785 44709402 ID=Msa0208710-mRNA-1:cds;Parent=Msa0208710-mRNA-1
chr2_1 CDS 44708129 44708312 44708129 ID=Msa0208710-mRNA-1:cds;Parent=Msa0208710-mRNA-1
chr2_1 CDS 44707254 44707391 44707254 ID=Msa0208710-mRNA-1:cds;Parent=Msa0208710-mRNA-1
chr2_1 CDS 44705666 44705836 44705666 ID=Msa0208710-mRNA-1:cds;Parent=Msa0208710-mRNA-1
chr2_1 CDS 44705487 44705590 44705487 ID=Msa0208710-mRNA-1:cds;Parent=Msa0208710-mRNA-1
chr2_1 CDS 44705089 44705156 44705089 ID=Msa0208710-mRNA-1:cds;Parent=Msa0208710-mRNA-1
chr2_1 CDS 44704025 44704191 44704025 ID=Msa0208710-mRNA-1:cds;Parent=Msa0208710-mRNA-1
chr2_1 CDS 44703376 44703445 44703376 ID=Msa0208710-mRNA-1:cds;Parent=Msa0208710-mRNA-1
chr2_1 CDS 44702565 44702719 44702565 ID=Msa0208710-mRNA-1:cds;Parent=Msa0208710-mRNA-1
chr2_1 CDS 44701060 44701165 44701060 ID=Msa0208710-mRNA-1:cds;Parent=Msa0208710-mRNA-1
chr2_1 CDS 44699824 44699911 44699824 ID=Msa0208710-mRNA-1:cds;Parent=Msa0208710-mRNA-1
chr2_1 CDS 44699584 44699727 44699584 ID=Msa0208710-mRNA-1:cds;Parent=Msa0208710-mRNA-1
chr2_1 CDS 44699261 44699491 44699261 ID=Msa0208710-mRNA-1:cds;Parent=Msa0208710-mRNA-1
chr2_1 three_prime_UTR 44698951 44699260 44698951 ID=Msa0208710-mRNA-1:three_prime_utr;Parent=Msa0208710-mRNA-1
Gene Sequence

>Msa0208710

ATGTCTACACTTCTTCTACCCACACCCCCCCTCCACACCTCCCTCTACCGCCGCAACACCTTATCATCATCATCATCATCATCACTTCAATTTCACTCTCGCTTCTCTTTTTCTTCCTTTCACTCTCTTCCCCAAACTCATTCAAGAAGAAGACGCATTTCCCTTCGCGCCTTTGATTCTTCCTCCGACACCAAAATCGAAGAAAAAGTGATTCAAGAAGGTGAAAAAGTTAGAATTGCTGATGAAGATTATCCCAGTGGAGAATTTGAATTTGAACCTATTACTGGTTGGAGGAATTTCGTCGTTAAGGTTAAGATGCTCATTGCGTATCCATGGGAACGTGTTCGTAAAGGTAGTGTTCTTACAATGAAGCTTCGTGGCCAGATATCTGATCAAGTGAAGAGTAGATTCTCTCCGGGACTTTCTCTACCTCAAATATGCGAGAATTTTTTGAAAGCAGCCTATGATCCTCGAATTTCTGGGGTCTATCTCCATATTGATAGTTTAAACTGTGGGTGGGGTAAAGTAGAAGAAATTCGAAGGCACATCTTGAACTTCAAAAAATCAGGAAAATTTGTTGTGGCTTATCTCCCTACATGTCAAGAAAAAGAATATTACCTCGCGTGTGCATGTGAAGAGATATATGCCCCTCCAAGTGCTTACTTTTCTTTGTTTGGATTGAGTGTTCAAGCCTCATTCCTCAGAGGCGTTTTAGATAAAATAGGAGTTGAACCGCAAGTGGAAAGGATTGGCAAGTACAAAAGTGCAGGAGATCAATTAGCTCGAACAACCATGTCTGATGAAAATTGTGAGATGTTGACTGCATTACTAGATAATATCTATACAAACTGGCTGGATAAAGTCTCTTCTGCCAAAGGAAAAGGAAGAGAAGATATTGAGAACTTTATAAATGAAGGTGTTTATCAAGTTGATAAGCTGAAAGAAGAGGGCCTTATATCAAATTTAATGTATGATGATGAGGTTACTGACATGTTGAAGGAGAGACTTGGAGTGAAAACAGATAAAAAACTGCCAACGGTCGATTACGGGAAATACTCCCGGGTTAGGAAATGGACACTTGGAATTTCAGGTGGCAAAGAACTGATAGCCATCATCCGGGCCTCAGGGAGCATTAGTCGAGTTAAGGGTCAGTTAAGTGTCTCTAGCTCAGGCATCACTGCGGAGGAGTTCATTGAGAAGATTCGCACTGTCAGAGAGTCAAAAAAATTTAAGGCTGCTATTATCAGAATTGACAGTCCTGGAGGTGACGCTCTTGCCTCTGATTTGATGTGGAGAGAAATTCGGCTTTTAGCTGCTTCAAAACCAGTCATTGCTTCAATGGCTGATGTGGCAGCAAGTGGAGGATACTACATGGCAATGGGAACTGATGCTATTGTTGCAGAAAGTCTTACGTTAACTGGTTCAATTGGAGTGGTCACAGGAAAATTTAACCTAGCGAAACTGTATGAGAAGATTGGCTTTAATAAAGAAATCATATCAAGGGGAAGATATGCTGAGCTCGTTAGTGCTGATCAGCGTTCTTTTAGGCCAGATGAAGCAGAGCTATTTGCCAAATCTGCACAGAATGCATATAAACAATTTCGAGACAAGGCAGCTTTATCCAGATCTATGACTGTGGACAAGATGGAGGAGGTAGCACAGGGTAGAGTTTGGACTGGTAAAGATGCAGCATCACATGGTTTGGTTGATGCTATTGGTGGCCTTTCCCGAGCTATTGCCATAGCAAAATTGAAGGCCAATATACCTCAGGACGAACAGGTAACTGTTGTGGAGATATCCAGATCTAGTCCCTCTCTACCTGAGATTTTATTAGGCGCACGGAGTTCCCTAACCGGAGTTGAAAGCACGTTGAAGGAACTGCTACAGGGGTTGACATTTTCTGATGGAGTTCAAGCTAGGATGGATGGAATCATTTTTCGTTCATTGGAAGGATATCCCAACGACAACCCCATTTTGTCAATTATAAAAGATTACCTCAGTTCCCTGTAG

Protein sequence

>Msa0208710

MSTLLLPTPPLHTSLYRRNTLSSSSSSSLQFHSRFSFSSFHSLPQTHSRRRRISLRAFDSSSDTKIEEKVIQEGEKVRIADEDYPSGEFEFEPITGWRNFVVKVKMLIAYPWERVRKGSVLTMKLRGQISDQVKSRFSPGLSLPQICENFLKAAYDPRISGVYLHIDSLNCGWGKVEEIRRHILNFKKSGKFVVAYLPTCQEKEYYLACACEEIYAPPSAYFSLFGLSVQASFLRGVLDKIGVEPQVERIGKYKSAGDQLARTTMSDENCEMLTALLDNIYTNWLDKVSSAKGKGREDIENFINEGVYQVDKLKEEGLISNLMYDDEVTDMLKERLGVKTDKKLPTVDYGKYSRVRKWTLGISGGKELIAIIRASGSISRVKGQLSVSSSGITAEEFIEKIRTVRESKKFKAAIIRIDSPGGDALASDLMWREIRLLAASKPVIASMADVAASGGYYMAMGTDAIVAESLTLTGSIGVVTGKFNLAKLYEKIGFNKEIISRGRYAELVSADQRSFRPDEAELFAKSAQNAYKQFRDKAALSRSMTVDKMEEVAQGRVWTGKDAASHGLVDAIGGLSRAIAIAKLKANIPQDEQVTVVEISRSSPSLPEILLGARSSLTGVESTLKELLQGLTFSDGVQARMDGIIFRSLEGYPNDNPILSIIKDYLSSL*