AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1191960


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1191960 MtrunA17_Chr4g0037981 83.333 144 16 2 1 144 1 136 5.52e-80 237
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1191960 AT3G19800.1 44.048 84 43 3 49 132 28 107 3.09e-14 67.8
Msa1191960 AT3G19800.2 50.769 65 29 2 68 132 43 104 3.36e-14 67.8

Find 120 sgRNAs with CRISPR-Local

Find 290 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGAAGTTGCAGAAGATTTA+AGG 0.106422 8_1:+36868805 None:intergenic
ACAAGTCAGGATAAAATATT+TGG 0.164517 8_1:+36871799 None:intergenic
CTCATTGGAATTGCAGAAAA+TGG 0.178941 8_1:+36868911 None:intergenic
CAATTCTTGTTCTAAGAAAA+TGG 0.221820 8_1:+36871607 None:intergenic
TTTGCGAGACCTACATTTAC+AGG 0.224233 8_1:-36871900 Msa1191960:CDS
TCAGAAAGCAAAGGGTTTAT+TGG 0.226722 8_1:-36867584 Msa1191960:three_prime_UTR
TGCAGAAGATTTAAGGTTAC+AGG 0.248624 8_1:+36868812 None:intergenic
TATGGCAAAATCTGGAAATT+TGG 0.255055 8_1:-36872644 Msa1191960:CDS
TGAAATACCTGTCGGCAATA+TGG 0.256325 8_1:+36871407 None:intergenic
TTCAAGGCGGGAGGATTTCT+TGG 0.279453 8_1:+36868779 None:intergenic
AAGACGCCGCTACCTGAAAT+TGG 0.281826 8_1:-36870741 Msa1191960:three_prime_UTR
GATGTCTTTAATAGTTTATC+AGG 0.288420 8_1:-36868642 Msa1191960:three_prime_UTR
ACCTTGCCTCATTGGTGATT+TGG 0.291115 8_1:+36868490 None:intergenic
ATATTGAGCTGAAGCTTCTT+TGG 0.292933 8_1:+36872617 None:intergenic
GTCCAAGTTGTCCTTTCTTT+TGG 0.306729 8_1:+36872492 None:intergenic
CAAAGGAAGTAGCACTAATA+TGG 0.314975 8_1:-36871734 Msa1191960:exon
TAAGGGTCATCTCCAATTTC+AGG 0.323199 8_1:+36870729 None:intergenic
ATTTGGATGAAACCACCTTT+TGG 0.331674 8_1:+36871816 None:intergenic
CATATTAGTGCTACTTCCTT+TGG 0.341697 8_1:+36871735 None:intergenic
GCATGCTAGCTTTGGTTTAT+CGG 0.347729 8_1:-36871483 Msa1191960:three_prime_UTR
GAAATACCTGTCGGCAATAT+GGG 0.350769 8_1:+36871408 None:intergenic
CACTTGCCAACACTTGTAAA+TGG 0.358825 8_1:-36871514 Msa1191960:three_prime_UTR
TATTGAGCTGAAGCTTCTTT+GGG 0.368375 8_1:+36872618 None:intergenic
GGCCTTGGTAGCAGTGTAGC+AGG 0.374582 8_1:+36872588 None:intergenic
ATCAAGATCAACTTCGTATC+CGG 0.376867 8_1:+36870134 None:intergenic
GAAATCTCTCTGAAGTTGTT+TGG 0.379708 8_1:-36868683 Msa1191960:three_prime_UTR
TGGAGAGTTTGCCGTCCATT+TGG 0.381019 8_1:+36869516 None:intergenic
CTTAATGTTGATACTTTACC+AGG 0.381509 8_1:+36868978 None:intergenic
AGAACGCTTAGATGAGCTTA+TGG 0.381571 8_1:+36869496 None:intergenic
TAATGATATAGATTTCAAAA+AGG 0.385501 8_1:+36869627 None:intergenic
CAAAAGGTGGTCGAGACTAT+TGG 0.396305 8_1:-36869771 Msa1191960:three_prime_UTR
TCATTGGAATTGCAGAAAAT+GGG 0.406489 8_1:+36868912 None:intergenic
GCATTACCATTTACAAGTGT+TGG 0.408915 8_1:+36871508 None:intergenic
GTCAGGCTTCTTTCGACAAA+AGG 0.416003 8_1:-36869787 Msa1191960:three_prime_UTR
AGAGAGAAAAGTGAAGGTTT+TGG 0.419828 8_1:+36872567 None:intergenic
AGATACAAGTGGACAAAGTC+AGG 0.421106 8_1:-36869804 Msa1191960:three_prime_UTR
TGCAGACAACCTTGCCTCAT+TGG 0.423541 8_1:+36868482 None:intergenic
TAATGCCAGCATGCTAGCTT+TGG 0.428452 8_1:-36871491 Msa1191960:three_prime_UTR
GGACAACTTGGACTCTCCTT+TGG 0.428988 8_1:-36872482 Msa1191960:CDS
AGTTGAGATATGGCAAAATC+TGG 0.437849 8_1:-36872652 None:intergenic
CATTTACTGCAGAGTTTAGC+CGG 0.442228 8_1:+36870091 None:intergenic
TTCTCAAAGTTCACAAGGCA+TGG 0.443232 8_1:+36868703 None:intergenic
AACGGAAAATATATGAATGA+TGG 0.444122 8_1:-36867637 Msa1191960:three_prime_UTR
GAATTTCTAATTCACAAGTC+AGG 0.446452 8_1:+36871786 None:intergenic
AAGTAGCACTAATATGGTTA+AGG 0.452287 8_1:-36871728 Msa1191960:exon
ATCAACTTCGTATCCGGGTC+TGG 0.462073 8_1:+36870140 None:intergenic
CGAGTCTTGTGGGATCCAAA+TGG 0.462679 8_1:-36869531 Msa1191960:three_prime_UTR
TATCATTACCAACGAATACT+TGG 0.467784 8_1:-36869612 Msa1191960:three_prime_UTR
TATGGTTAAGGATTGGAACT+TGG 0.480841 8_1:-36871716 Msa1191960:three_prime_UTR
ACGGAAAATATCACGGGGAA+TGG 0.484568 8_1:-36871943 Msa1191960:CDS
GAATTACTGATTATTGCCAT+TGG 0.487849 8_1:+36867558 None:intergenic
CTCTCGTTTAATTTATGACA+AGG 0.490736 8_1:+36868746 None:intergenic
ACTAATCTCTCGAGTCTTGT+GGG 0.494535 8_1:-36869541 Msa1191960:three_prime_UTR
TAATGTATAGAATAATCGTC+AGG 0.498300 8_1:-36869701 Msa1191960:three_prime_UTR
CAATCAAATCCTGTAAATGT+AGG 0.499167 8_1:+36871891 None:intergenic
TACCAAAAGAAAGGACAACT+TGG 0.499541 8_1:-36872494 Msa1191960:CDS
CATCAATCTCTGCGTCCAAA+AGG 0.501589 8_1:-36871831 Msa1191960:CDS
ACAAGGAACTGAAAATTTCA+AGG 0.503255 8_1:+36868763 None:intergenic
GCACTAATATGGTTAAGGAT+TGG 0.506185 8_1:-36871723 Msa1191960:three_prime_UTR
AACTAATCTCTCGAGTCTTG+TGG 0.513385 8_1:-36869542 Msa1191960:three_prime_UTR
TTTGTTGCAGGATACGTGCT+CGG 0.521238 8_1:-36869988 Msa1191960:intron
TCAAGATCAACTTCGTATCC+GGG 0.528329 8_1:+36870135 None:intergenic
CAAGGAAGAATCACTGATCC+TGG 0.528820 8_1:-36868996 Msa1191960:three_prime_UTR
TACTGCAGAGTTTAGCCGGA+TGG 0.530577 8_1:+36870095 None:intergenic
TTCTTCCCCATATTGCCGAC+AGG 0.531443 8_1:-36871414 Msa1191960:intron
CACTGCTTCTACCAAAAGAA+AGG 0.532538 8_1:-36872503 Msa1191960:CDS
ACGGAAAATATATGAATGAT+GGG 0.537715 8_1:-36867636 Msa1191960:three_prime_UTR
CTATTGTAAAAGATGCCATC+CGG 0.538715 8_1:-36870110 Msa1191960:three_prime_UTR
CGGCCGACGGAAAATATCAC+GGG 0.539700 8_1:-36871949 Msa1191960:CDS
AAGTGAGATCAGAAAGCAAA+GGG 0.543826 8_1:-36867592 Msa1191960:three_prime_UTR
TCTCAAAGTTCACAAGGCAT+GGG 0.543905 8_1:+36868704 None:intergenic
GGAACTGAAAATTTCAAGGC+GGG 0.548219 8_1:+36868767 None:intergenic
AATTGCGTGTGGAGGATGTC+CGG 0.550655 8_1:+36869570 None:intergenic
GCCTTGGTAGCAGTGTAGCA+GGG 0.557882 8_1:+36872589 None:intergenic
TGAAGATGCTGGTGAAACAT+TGG 0.562066 8_1:+36868845 None:intergenic
CTTGTCATAAATTAAACGAG+AGG 0.568113 8_1:-36868745 Msa1191960:three_prime_UTR
TTCAAATCAACGCCAACCAC+AGG 0.572212 8_1:+36867678 None:intergenic
AAGGGTTTATTGGATTCCAA+TGG 0.573342 8_1:-36867574 Msa1191960:three_prime_UTR
TCATCTCCAATTTCAGGTAG+CGG 0.574462 8_1:+36870735 None:intergenic
TAGTTTATCCAAGTATTCGT+TGG 0.574722 8_1:+36869604 None:intergenic
CACACTTACAATAATACTAG+TGG 0.576579 8_1:-36872538 Msa1191960:CDS
TCCCTGCTACACTGCTACCA+AGG 0.578770 8_1:-36872590 Msa1191960:CDS
GTAATTGTAATTGTAACCAA+AGG 0.579073 8_1:-36871751 Msa1191960:CDS
GATTGGGAAGAACACGAGTA+GGG 0.580793 8_1:-36871999 Msa1191960:CDS
AGATTGGGAAGAACACGAGT+AGG 0.581186 8_1:-36872000 Msa1191960:CDS
TTAGTTTCTGCAATTGCGTG+TGG 0.581443 8_1:+36869559 None:intergenic
GGATCAGTGATTCTTCCTTG+TGG 0.587887 8_1:+36868999 None:intergenic
AAACTGAGAGAGAAAAGTGA+AGG 0.589402 8_1:+36872561 None:intergenic
CAATCTCTGCGTCCAAAAGG+TGG 0.590865 8_1:-36871828 Msa1191960:CDS
AGGCTTCTTTCGACAAAAGG+TGG 0.591222 8_1:-36869784 Msa1191960:three_prime_UTR
TGATATTGTGATCAGACGGC+GGG 0.594893 8_1:+36871973 None:intergenic
CCGTCTGATCACAATATCAC+CGG 0.596646 8_1:-36871969 Msa1191960:CDS
AAATACCTGTCGGCAATATG+GGG 0.600836 8_1:+36871409 None:intergenic
GCTACTTGTGCATTCTTACG+TGG 0.605254 8_1:+36871854 None:intergenic
ATAAACCAAAGCTAGCATGC+TGG 0.606055 8_1:+36871486 None:intergenic
GACACACAAAGCACAGACAA+CGG 0.606975 8_1:-36867655 Msa1191960:three_prime_UTR
CAGCACTTCGGTAACTAGCA+CGG 0.609445 8_1:-36868605 Msa1191960:three_prime_UTR
ACTGAAAATTTCAAGGCGGG+AGG 0.610139 8_1:+36868770 None:intergenic
CAGGTGATATATACCAGACC+CGG 0.614257 8_1:-36870153 Msa1191960:three_prime_UTR
CATTGGAATTGCAGAAAATG+GGG 0.618046 8_1:+36868913 None:intergenic
TTACGAGGTTCTCAATGTCA+AGG 0.619850 8_1:+36868560 None:intergenic
ATCACAATATCACCGGCCGA+CGG 0.621526 8_1:-36871962 Msa1191960:CDS
GTTTCTGCAATTGCGTGTGG+AGG 0.627568 8_1:+36869562 None:intergenic
CATTGAGGAGACTCATTACG+AGG 0.636562 8_1:+36868545 None:intergenic
ACCAAATCACCAATGAGGCA+AGG 0.637535 8_1:-36868491 Msa1191960:three_prime_UTR
GAGATTTCTCAAAGTTCACA+AGG 0.644008 8_1:+36868698 None:intergenic
GTAAACTGAGTGCAGCACTT+CGG 0.645782 8_1:-36868617 Msa1191960:three_prime_UTR
TCTTGTGGGATCCAAATGGA+CGG 0.648508 8_1:-36869527 Msa1191960:three_prime_UTR
ACTGTATATCGAGTTACCAA+AGG 0.649362 8_1:+36872466 None:intergenic
CCGGCCGACGGAAAATATCA+CGG 0.651457 8_1:-36871950 Msa1191960:CDS
CAAGTGAGATCAGAAAGCAA+AGG 0.658045 8_1:-36867593 Msa1191960:three_prime_UTR
CCGGTGATATTGTGATCAGA+CGG 0.661138 8_1:+36871969 None:intergenic
GTGATATTGTGATCAGACGG+CGG 0.677413 8_1:+36871972 None:intergenic
GCTGTCTTCATCTCTCAACA+AGG 0.680466 8_1:-36868940 Msa1191960:three_prime_UTR
GATATGACAGTTGAAGATGC+TGG 0.682484 8_1:+36868834 None:intergenic
CGAGGTTCTCAATGTCAAGG+AGG 0.689102 8_1:+36868563 None:intergenic
TCGTTACCAAATCACCAATG+AGG 0.695968 8_1:-36868496 Msa1191960:three_prime_UTR
GGCCGACGGAAAATATCACG+GGG 0.713779 8_1:-36871948 Msa1191960:CDS
AGGAACTGAAAATTTCAAGG+CGG 0.730120 8_1:+36868766 None:intergenic
TTCAACGAACAAGATCCACA+AGG 0.762477 8_1:-36869014 Msa1191960:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATTTTACTAAACAAAATT+GGG + chr8_1:36869736-36869755 None:intergenic 10.0%
!!! TATATTTTACTAAACAAAAT+TGG + chr8_1:36869737-36869756 None:intergenic 10.0%
!!! TTAATTTTATCTTTTCATTT+TGG + chr8_1:36872036-36872055 None:intergenic 10.0%
!!! TTTATACTTTATAAACATTT+TGG - chr8_1:36872286-36872305 Msa1191960:intron 10.0%
!!! CATGAATTCATTTTTTAATA+TGG - chr8_1:36868119-36868138 Msa1191960:intron 15.0%
!! AAAAATTCAAAATCAAGATT+GGG - chr8_1:36868158-36868177 Msa1191960:intron 15.0%
!!! TTTTTCCTACATAAATATTA+TGG - chr8_1:36868878-36868897 Msa1191960:three_prime_UTR 15.0%
!!! ACTTTTTTTGTCTTAATAAT+GGG + chr8_1:36869002-36869021 None:intergenic 15.0%
!!! TACTTTTTTTGTCTTAATAA+TGG + chr8_1:36869003-36869022 None:intergenic 15.0%
!! TAATGATATAGATTTCAAAA+AGG + chr8_1:36870549-36870568 None:intergenic 15.0%
!!! ATAAACTATGTTTTTTAAAC+CGG - chr8_1:36870584-36870603 Msa1191960:intron 15.0%
!! TATGTAACTTAAAAAATGTA+TGG + chr8_1:36870805-36870824 None:intergenic 15.0%
!! ATATTTCAAACTCAATAATA+AGG + chr8_1:36871909-36871928 None:intergenic 15.0%
!! TTAAAATGATAGAAAAAACA+AGG - chr8_1:36872058-36872077 Msa1191960:intron 15.0%
!!! TTGTGCAATTTTTTTATATT+TGG + chr8_1:36872119-36872138 None:intergenic 15.0%
!! AATATCACAGAATTAAAGTA+AGG + chr8_1:36867748-36867767 None:intergenic 20.0%
!! ACAAAATCAGATATAAGAAA+AGG + chr8_1:36867777-36867796 None:intergenic 20.0%
!! TGTATCAAATATCATTTAGA+AGG - chr8_1:36867981-36868000 Msa1191960:intron 20.0%
!! CAAAAATTCAAAATCAAGAT+TGG - chr8_1:36868157-36868176 Msa1191960:intron 20.0%
!! AAAAAATAATAGACCAAACT+GGG + chr8_1:36869092-36869111 None:intergenic 20.0%
!! ATAAAAAAGTCTTACAAATC+TGG + chr8_1:36869115-36869134 None:intergenic 20.0%
!!! ATGTACTAAATTTTTAGTCA+TGG - chr8_1:36869943-36869962 Msa1191960:intron 20.0%
!!! TGTACTAAATTTTTAGTCAT+GGG - chr8_1:36869944-36869963 Msa1191960:intron 20.0%
!!! TTTTATTTGAAAACTTCAGA+AGG - chr8_1:36870252-36870271 Msa1191960:intron 20.0%
!!! GCAAATTAATTTTAATGAGT+AGG - chr8_1:36870920-36870939 Msa1191960:intron 20.0%
!!! GTTGAAATTATTCTCATTTT+TGG + chr8_1:36871110-36871129 None:intergenic 20.0%
!! TCTAATTGAATTCTATCATT+TGG - chr8_1:36871868-36871887 Msa1191960:CDS 20.0%
!! AAAAAAATTGCACAAGAATT+TGG - chr8_1:36872124-36872143 Msa1191960:intron 20.0%
!! ACGTATTTGAACTTATTAAT+TGG - chr8_1:36872151-36872170 Msa1191960:intron 20.0%
!!! AATTGTTTTCATAAGAAATC+AGG + chr8_1:36872268-36872287 None:intergenic 20.0%
! AAATATCTTGCTTTCTTACT+AGG + chr8_1:36867929-36867948 None:intergenic 25.0%
! AATATCATTTAGAAGGTTCA+AGG - chr8_1:36867988-36868007 Msa1191960:intron 25.0%
! AAATGCTAATAAGTAGTAAG+TGG - chr8_1:36868040-36868059 Msa1191960:intron 25.0%
!! TTGAATTTTTGATCACATAG+AGG + chr8_1:36868148-36868167 None:intergenic 25.0%
! ACAAGTCAGGATAAAATATT+TGG + chr8_1:36868377-36868396 None:intergenic 25.0%
! GTAATTGTAATTGTAACCAA+AGG - chr8_1:36868422-36868441 Msa1191960:intron 25.0%
!! ACGACTTAAAAAGTATAAGT+CGG - chr8_1:36868500-36868519 Msa1191960:three_prime_UTR 25.0%
!!! CAATTCTTGTTCTAAGAAAA+TGG + chr8_1:36868569-36868588 None:intergenic 25.0%
! TTCCTACATAAATATTATGG+TGG - chr8_1:36868881-36868900 Msa1191960:three_prime_UTR 25.0%
! TTCCACCATAATATTTATGT+AGG + chr8_1:36868886-36868905 None:intergenic 25.0%
! GAAAAAATAATAGACCAAAC+TGG + chr8_1:36869093-36869112 None:intergenic 25.0%
! TTGACACAAAATTTAACGTA+TGG - chr8_1:36869379-36869398 Msa1191960:intron 25.0%
! TGACACAAAATTTAACGTAT+GGG - chr8_1:36869380-36869399 Msa1191960:intron 25.0%
!! TTGATTTGAGACTTACATAA+GGG + chr8_1:36869464-36869483 None:intergenic 25.0%
!!! ATTGATTTGAGACTTACATA+AGG + chr8_1:36869465-36869484 None:intergenic 25.0%
!!! GTATATTTGATAGCATTTTC+AGG + chr8_1:36869623-36869642 None:intergenic 25.0%
! TTACTAAACAAAATTGGGAA+AGG + chr8_1:36869731-36869750 None:intergenic 25.0%
! TATATCACCTGTATTATATG+AGG + chr8_1:36870011-36870030 None:intergenic 25.0%
!! GAAATTTTCGTTTTCAATGT+TGG + chr8_1:36870316-36870335 None:intergenic 25.0%
!!! TTTTGTTTTTCAGATACAAG+TGG - chr8_1:36870358-36870377 Msa1191960:intron 25.0%
! TAATGTATAGAATAATCGTC+AGG - chr8_1:36870472-36870491 Msa1191960:intron 25.0%
! TTAAACGTAACATTATGAGA+TGG - chr8_1:36870827-36870846 Msa1191960:intron 25.0%
! GATGTCTTTAATAGTTTATC+AGG - chr8_1:36871531-36871550 Msa1191960:three_prime_UTR 25.0%
!! TTCTTGTCCAAAATCATTTT+TGG - chr8_1:36871654-36871673 Msa1191960:three_prime_UTR 25.0%
!! CAAGAGATTTTTGTGAAATA+TGG + chr8_1:36871820-36871839 None:intergenic 25.0%
! TTTCACAAAAATCTCTTGTT+TGG - chr8_1:36871822-36871841 Msa1191960:CDS 25.0%
! GGAACAAATCTAAAAATCTA+CGG - chr8_1:36871843-36871862 Msa1191960:CDS 25.0%
!! GAATTCTATCATTTGGATTT+TGG - chr8_1:36871875-36871894 Msa1191960:CDS 25.0%
! ATTTGTACATTAACCAAGTA+TGG - chr8_1:36871973-36871992 Msa1191960:CDS 25.0%
! TTTGTACATTAACCAAGTAT+GGG - chr8_1:36871974-36871993 Msa1191960:CDS 25.0%
!!! GTTATGAATTTTGATGTCAT+AGG + chr8_1:36872097-36872116 None:intergenic 25.0%
!!! TATAAGCTATTTCTGTAACA+AGG + chr8_1:36872323-36872342 None:intergenic 25.0%
! TTTAAATCACATATGCTTGA+AGG + chr8_1:36872463-36872482 None:intergenic 25.0%
! AACGGAAAATATATGAATGA+TGG - chr8_1:36872536-36872555 Msa1191960:CDS 25.0%
! ACGGAAAATATATGAATGAT+GGG - chr8_1:36872537-36872556 Msa1191960:CDS 25.0%
CACACTTACAATAATACTAG+TGG - chr8_1:36867635-36867654 Msa1191960:three_prime_UTR 30.0%
CAGAATTAAAGTAAGGAGAA+GGG + chr8_1:36867741-36867760 None:intergenic 30.0%
ACAGAATTAAAGTAAGGAGA+AGG + chr8_1:36867742-36867761 None:intergenic 30.0%
ATTTGATACATTCAAGAGAG+AGG + chr8_1:36867971-36867990 None:intergenic 30.0%
CAATCAAATCCTGTAAATGT+AGG + chr8_1:36868285-36868304 None:intergenic 30.0%
GAATTTCTAATTCACAAGTC+AGG + chr8_1:36868390-36868409 None:intergenic 30.0%
AAGTAGCACTAATATGGTTA+AGG - chr8_1:36868445-36868464 Msa1191960:intron 30.0%
! CGACTTAAAAAGTATAAGTC+GGG - chr8_1:36868501-36868520 Msa1191960:three_prime_UTR 30.0%
! TCGGGTCAAATGAATTTTAT+TGG - chr8_1:36868519-36868538 Msa1191960:three_prime_UTR 30.0%
GAATGAAATGAAATACCTGT+CGG + chr8_1:36868777-36868796 None:intergenic 30.0%
TATTGTGTTGTGTAATGTTG+AGG + chr8_1:36868848-36868867 None:intergenic 30.0%
ATGATGTCAAGGATATACTA+AGG + chr8_1:36869048-36869067 None:intergenic 30.0%
AGATCAAATTCATGATGTCA+AGG + chr8_1:36869059-36869078 None:intergenic 30.0%
TCCATCTACAATGTCAAATT+CGG - chr8_1:36869148-36869167 Msa1191960:intron 30.0%
CACATAGAATAGAATTTGAC+GGG + chr8_1:36869327-36869346 None:intergenic 30.0%
CCACATAGAATAGAATTTGA+CGG + chr8_1:36869328-36869347 None:intergenic 30.0%
! CGTTAAATTTTGTGTCAATC+TGG + chr8_1:36869377-36869396 None:intergenic 30.0%
TCACTAGGCAAATTCAAAAT+TGG + chr8_1:36869676-36869695 None:intergenic 30.0%
TATGTAAGTTGTCTATCACT+AGG + chr8_1:36869691-36869710 None:intergenic 30.0%
TAGCACTCAAATATTGCTTA+GGG + chr8_1:36869806-36869825 None:intergenic 30.0%
! TATTTGAGTGCTACTACTAA+AGG - chr8_1:36869813-36869832 Msa1191960:intron 30.0%
TGCAACAAAAGAATGTTATG+GGG + chr8_1:36870174-36870193 None:intergenic 30.0%
CTGCAACAAAAGAATGTTAT+GGG + chr8_1:36870175-36870194 None:intergenic 30.0%
TATCATTACCAACGAATACT+TGG - chr8_1:36870561-36870580 Msa1191960:intron 30.0%
TAGTTTATCCAAGTATTCGT+TGG + chr8_1:36870572-36870591 None:intergenic 30.0%
ATCTTGACTCCAAAAACAAA+AGG + chr8_1:36870768-36870787 None:intergenic 30.0%
AATGTATGGCTTAAACTACA+AGG + chr8_1:36870791-36870810 None:intergenic 30.0%
! TTGTCAGTTTCAATTTTCCT+CGG - chr8_1:36870866-36870885 Msa1191960:intron 30.0%
!!! TCAGTCTCGAATTTTGAAAT+AGG + chr8_1:36870971-36870990 None:intergenic 30.0%
TCAAAATTCGAGACTGAAAA+CGG - chr8_1:36870974-36870993 Msa1191960:intron 30.0%
CTTAATGTTGATACTTTACC+AGG + chr8_1:36871198-36871217 None:intergenic 30.0%
TCATTGGAATTGCAGAAAAT+GGG + chr8_1:36871264-36871283 None:intergenic 30.0%
!! TTGTTTTATCAATGTCGATG+TGG + chr8_1:36871306-36871325 None:intergenic 30.0%
ACAAGGAACTGAAAATTTCA+AGG + chr8_1:36871413-36871432 None:intergenic 30.0%
! CTCTCGTTTAATTTATGACA+AGG + chr8_1:36871430-36871449 None:intergenic 30.0%
CTTGTCATAAATTAAACGAG+AGG - chr8_1:36871428-36871447 Msa1191960:three_prime_UTR 30.0%
TTTGGACAAGAAAAACATTG+AGG + chr8_1:36871646-36871665 None:intergenic 30.0%
! GTAACGACCAAAAATGATTT+TGG + chr8_1:36871664-36871683 None:intergenic 30.0%
GACAATCATCTTAGTATTTC+TGG + chr8_1:36871935-36871954 None:intergenic 30.0%
TTGTCACTCAAATTACTATG+AGG - chr8_1:36871950-36871969 Msa1191960:CDS 30.0%
TTGTTGATCATGTCTCAATT+AGG + chr8_1:36872437-36872456 None:intergenic 30.0%
!! TAAATAAGCTGTTTTACCTG+TGG - chr8_1:36872479-36872498 Msa1191960:CDS 30.0%
! GAATTACTGATTATTGCCAT+TGG + chr8_1:36872618-36872637 None:intergenic 30.0%
TATTGAGCTGAAGCTTCTTT+GGG + chr8_1:36867558-36867577 None:intergenic 35.0%
ATATTGAGCTGAAGCTTCTT+TGG + chr8_1:36867559-36867578 None:intergenic 35.0%
! AGAGAGAAAAGTGAAGGTTT+TGG + chr8_1:36867609-36867628 None:intergenic 35.0%
AAACTGAGAGAGAAAAGTGA+AGG + chr8_1:36867615-36867634 None:intergenic 35.0%
TACCAAAAGAAAGGACAACT+TGG - chr8_1:36867679-36867698 Msa1191960:three_prime_UTR 35.0%
ACTGTATATCGAGTTACCAA+AGG + chr8_1:36867710-36867729 None:intergenic 35.0%
TAAAGTAAGGAGAAGGGAAA+GGG + chr8_1:36867735-36867754 None:intergenic 35.0%
TTAAAGTAAGGAGAAGGGAA+AGG + chr8_1:36867736-36867755 None:intergenic 35.0%
AACACTATGAACTCTACTTG+TGG + chr8_1:36867807-36867826 None:intergenic 35.0%
AAAGTGGAGGAATGTGAAAT+TGG + chr8_1:36867839-36867858 None:intergenic 35.0%
AAAGACGTAGATGCAACAAA+CGG - chr8_1:36867885-36867904 Msa1191960:intron 35.0%
! ATTTGGATGAAACCACCTTT+TGG + chr8_1:36868360-36868379 None:intergenic 35.0%
!! CATATTAGTGCTACTTCCTT+TGG + chr8_1:36868441-36868460 None:intergenic 35.0%
CAAAGGAAGTAGCACTAATA+TGG - chr8_1:36868439-36868458 Msa1191960:intron 35.0%
GCACTAATATGGTTAAGGAT+TGG - chr8_1:36868450-36868469 Msa1191960:intron 35.0%
TATGGTTAAGGATTGGAACT+TGG - chr8_1:36868457-36868476 Msa1191960:intron 35.0%
GCATTACCATTTACAAGTGT+TGG + chr8_1:36868668-36868687 None:intergenic 35.0%
! AACAGTTGCTGCATTTTGAA+GGG + chr8_1:36868741-36868760 None:intergenic 35.0%
TAATTATGATTTACCCGAGC+TGG - chr8_1:36868913-36868932 Msa1191960:three_prime_UTR 35.0%
CCATCTACAATGTCAAATTC+GGG - chr8_1:36869149-36869168 Msa1191960:intron 35.0%
! CTTTGGTGACATTAATGTCA+CGG - chr8_1:36869177-36869196 Msa1191960:intron 35.0%
CTTGTGTGACATTAATGTCA+CGG + chr8_1:36869299-36869318 None:intergenic 35.0%
CCGTCAAATTCTATTCTATG+TGG - chr8_1:36869325-36869344 Msa1191960:intron 35.0%
! TTGTGTCAATCTGGAATCAT+TGG + chr8_1:36869368-36869387 None:intergenic 35.0%
AATTTAACGTATGGGTTCTC+AGG - chr8_1:36869388-36869407 Msa1191960:intron 35.0%
ATTTAACGTATGGGTTCTCA+GGG - chr8_1:36869389-36869408 Msa1191960:intron 35.0%
TATTCCTATCAATGTGCAGA+AGG + chr8_1:36869511-36869530 None:intergenic 35.0%
GTAGCACTCAAATATTGCTT+AGG + chr8_1:36869807-36869826 None:intergenic 35.0%
AAAGGCTCAAAATGAGTTAC+AGG - chr8_1:36869831-36869850 Msa1191960:intron 35.0%
!!! TGTTGCATAGTCTTTTTCAG+TGG - chr8_1:36869880-36869899 Msa1191960:intron 35.0%
ATCAAGATCAACTTCGTATC+CGG + chr8_1:36870042-36870061 None:intergenic 35.0%
CTATTGTAAAAGATGCCATC+CGG - chr8_1:36870063-36870082 Msa1191960:intron 35.0%
CCTGCAACAAAAGAATGTTA+TGG + chr8_1:36870176-36870195 None:intergenic 35.0%
! CCATAACATTCTTTTGTTGC+AGG - chr8_1:36870173-36870192 Msa1191960:intron 35.0%
GAGTTGTGCAAAAAATCTGA+GGG - chr8_1:36870207-36870226 Msa1191960:intron 35.0%
TCATTGCAATACAAGGATGT+AGG - chr8_1:36870275-36870294 Msa1191960:intron 35.0%
! AGCATTTCTTATTTACTCCG+AGG + chr8_1:36870886-36870905 None:intergenic 35.0%
GATTATTGGAAAACTTCCTC+GGG + chr8_1:36871016-36871035 None:intergenic 35.0%
CGATTATTGGAAAACTTCCT+CGG + chr8_1:36871017-36871036 None:intergenic 35.0%
! AGGAAGTTTTCCAATAATCG+TGG - chr8_1:36871017-36871036 Msa1191960:intron 35.0%
! GGAAGTTTTCCAATAATCGT+GGG - chr8_1:36871018-36871037 Msa1191960:intron 35.0%
CATTGGAATTGCAGAAAATG+GGG + chr8_1:36871263-36871282 None:intergenic 35.0%
CTCATTGGAATTGCAGAAAA+TGG + chr8_1:36871265-36871284 None:intergenic 35.0%
!! TTACTTTTCTGTGGACTCAT+TGG + chr8_1:36871280-36871299 None:intergenic 35.0%
!! ATGTGGTGATTACTTTTCTG+TGG + chr8_1:36871289-36871308 None:intergenic 35.0%
! TGCAGAAGATTTAAGGTTAC+AGG + chr8_1:36871364-36871383 None:intergenic 35.0%
CTGAAGTTGCAGAAGATTTA+AGG + chr8_1:36871371-36871390 None:intergenic 35.0%
AGGAACTGAAAATTTCAAGG+CGG + chr8_1:36871410-36871429 None:intergenic 35.0%
GAGATTTCTCAAAGTTCACA+AGG + chr8_1:36871478-36871497 None:intergenic 35.0%
!! GAAATCTCTCTGAAGTTGTT+TGG - chr8_1:36871490-36871509 Msa1191960:three_prime_UTR 35.0%
!! CTATCATTTGGATTTTGGCA+TGG - chr8_1:36871880-36871899 Msa1191960:CDS 35.0%
GGTATAAACAATTGTGAGAC+TGG - chr8_1:36872172-36872191 Msa1191960:intron 35.0%
AAGAAATCAGGAACAGCTTA+TGG + chr8_1:36872256-36872275 None:intergenic 35.0%
AAGTGAGATCAGAAAGCAAA+GGG - chr8_1:36872581-36872600 Msa1191960:CDS 35.0%
TCAGAAAGCAAAGGGTTTAT+TGG - chr8_1:36872589-36872608 Msa1191960:CDS 35.0%
AAGGGTTTATTGGATTCCAA+TGG - chr8_1:36872599-36872618 Msa1191960:CDS 35.0%
!! AAAAGTGAAGGTTTTGGCCT+TGG + chr8_1:36867603-36867622 None:intergenic 40.0%
! TCTTTTGGTAGAAGCAGTGA+TGG + chr8_1:36867669-36867688 None:intergenic 40.0%
CACTGCTTCTACCAAAAGAA+AGG - chr8_1:36867670-36867689 Msa1191960:three_prime_UTR 40.0%
! GTCCAAGTTGTCCTTTCTTT+TGG + chr8_1:36867684-36867703 None:intergenic 40.0%
TGGAGGAATGTGAAATTGGA+AGG + chr8_1:36867835-36867854 None:intergenic 40.0%
ATGCCACTAAGGACTAAAAG+TGG + chr8_1:36867855-36867874 None:intergenic 40.0%
TGGATGCATAAATGCCACTA+AGG + chr8_1:36867866-36867885 None:intergenic 40.0%
! GTTTGTTGCATCTACGTCTT+TGG + chr8_1:36867886-36867905 None:intergenic 40.0%
TTTGCGAGACCTACATTTAC+AGG - chr8_1:36868273-36868292 Msa1191960:intron 40.0%
CACTTGCCAACACTTGTAAA+TGG - chr8_1:36868659-36868678 Msa1191960:three_prime_UTR 40.0%
ATAAACCAAAGCTAGCATGC+TGG + chr8_1:36868690-36868709 None:intergenic 40.0%
!! GCATGCTAGCTTTGGTTTAT+CGG - chr8_1:36868690-36868709 Msa1191960:three_prime_UTR 40.0%
! GAACAGTTGCTGCATTTTGA+AGG + chr8_1:36868742-36868761 None:intergenic 40.0%
AAATACCTGTCGGCAATATG+GGG + chr8_1:36868767-36868786 None:intergenic 40.0%
GAAATACCTGTCGGCAATAT+GGG + chr8_1:36868768-36868787 None:intergenic 40.0%
TGAAATACCTGTCGGCAATA+TGG + chr8_1:36868769-36868788 None:intergenic 40.0%
TTCCACTTAGAATTCCAGCT+CGG + chr8_1:36868930-36868949 None:intergenic 40.0%
!! AAGAGGTTCTGAGTAAAGTC+TGG + chr8_1:36868970-36868989 None:intergenic 40.0%
!! ATAATGGGCAAAGAGAGAAG+AGG + chr8_1:36868987-36869006 None:intergenic 40.0%
ATAATAGACCAAACTGGGCA+AGG + chr8_1:36869087-36869106 None:intergenic 40.0%
CCCGAATTTGACATTGTAGA+TGG + chr8_1:36869152-36869171 None:intergenic 40.0%
TCTACAATGTCAAATTCGGG+TGG - chr8_1:36869152-36869171 Msa1191960:intron 40.0%
GTGACATTAGATGTGTTGTG+TGG + chr8_1:36869249-36869268 None:intergenic 40.0%
ATCTAATGTCACCCAATGTG+TGG - chr8_1:36869257-36869276 Msa1191960:intron 40.0%
TTAAATCTGGGCCACACATT+GGG + chr8_1:36869271-36869290 None:intergenic 40.0%
ATTAAATCTGGGCCACACAT+TGG + chr8_1:36869272-36869291 None:intergenic 40.0%
GTCACGGTGACATTAAATCT+GGG + chr8_1:36869193-36869212 None:intergenic 40.0%
TGTCACGGTGACATTAAATC+TGG + chr8_1:36869192-36869211 None:intergenic 40.0%
! TCATCTCCAATTTCAGGTAG+CGG + chr8_1:36869441-36869460 None:intergenic 40.0%
TAAGGGTCATCTCCAATTTC+AGG + chr8_1:36869447-36869466 None:intergenic 40.0%
TTCTCCTTCTGCACATTGAT+AGG - chr8_1:36869504-36869523 Msa1191960:three_prime_UTR 40.0%
CACAGCTCCTCATATAATAC+AGG - chr8_1:36870001-36870020 Msa1191960:intron 40.0%
TCAAGATCAACTTCGTATCC+GGG + chr8_1:36870041-36870060 None:intergenic 40.0%
CATTTACTGCAGAGTTTAGC+CGG + chr8_1:36870085-36870104 None:intergenic 40.0%
GGAGTTGTGCAAAAAATCTG+AGG - chr8_1:36870206-36870225 Msa1191960:intron 40.0%
CAGAAGGTCATTGCAATACA+AGG - chr8_1:36870268-36870287 Msa1191960:intron 40.0%
AGATACAAGTGGACAAAGTC+AGG - chr8_1:36870369-36870388 Msa1191960:intron 40.0%
TTAGTTTCTGCAATTGCGTG+TGG + chr8_1:36870617-36870636 None:intergenic 40.0%
AACTAATCTCTCGAGTCTTG+TGG - chr8_1:36870631-36870650 Msa1191960:intron 40.0%
! ACTAATCTCTCGAGTCTTGT+GGG - chr8_1:36870632-36870651 Msa1191960:intron 40.0%
AGAACGCTTAGATGAGCTTA+TGG + chr8_1:36870680-36870699 None:intergenic 40.0%
!!! CAAACGCAGCCTTTTGTTTT+TGG - chr8_1:36870756-36870775 Msa1191960:three_prime_UTR 40.0%
TTCAACGAACAAGATCCACA+AGG - chr8_1:36871159-36871178 Msa1191960:intron 40.0%
TGAAGATGCTGGTGAAACAT+TGG + chr8_1:36871331-36871350 None:intergenic 40.0%
GATATGACAGTTGAAGATGC+TGG + chr8_1:36871342-36871361 None:intergenic 40.0%
GGAACTGAAAATTTCAAGGC+GGG + chr8_1:36871409-36871428 None:intergenic 40.0%
TCTCAAAGTTCACAAGGCAT+GGG + chr8_1:36871472-36871491 None:intergenic 40.0%
TTCTCAAAGTTCACAAGGCA+TGG + chr8_1:36871473-36871492 None:intergenic 40.0%
TTACGAGGTTCTCAATGTCA+AGG + chr8_1:36871616-36871635 None:intergenic 40.0%
TCGTTACCAAATCACCAATG+AGG - chr8_1:36871677-36871696 Msa1191960:three_prime_UTR 40.0%
GTACATTAACCAAGTATGGG+TGG - chr8_1:36871977-36871996 Msa1191960:CDS 40.0%
!! TAAGCTGTTTTACCTGTGGT+TGG - chr8_1:36872483-36872502 Msa1191960:CDS 40.0%
CAAGTGAGATCAGAAAGCAA+AGG - chr8_1:36872580-36872599 Msa1191960:CDS 40.0%
CCACTAAGGACTAAAAGTGG+AGG + chr8_1:36867852-36867871 None:intergenic 45.0%
!! CCTCCACTTTTAGTCCTTAG+TGG - chr8_1:36867849-36867868 Msa1191960:intron 45.0%
AGATTGGGAAGAACACGAGT+AGG - chr8_1:36868173-36868192 Msa1191960:intron 45.0%
GATTGGGAAGAACACGAGTA+GGG - chr8_1:36868174-36868193 Msa1191960:intron 45.0%
TGATATTGTGATCAGACGGC+GGG + chr8_1:36868203-36868222 None:intergenic 45.0%
GTGATATTGTGATCAGACGG+CGG + chr8_1:36868204-36868223 None:intergenic 45.0%
CCGGTGATATTGTGATCAGA+CGG + chr8_1:36868207-36868226 None:intergenic 45.0%
CCGTCTGATCACAATATCAC+CGG - chr8_1:36868204-36868223 Msa1191960:intron 45.0%
! TTCCCCGTGATATTTTCCGT+CGG + chr8_1:36868230-36868249 None:intergenic 45.0%
ACGGAAAATATCACGGGGAA+TGG - chr8_1:36868230-36868249 Msa1191960:intron 45.0%
GCTACTTGTGCATTCTTACG+TGG + chr8_1:36868322-36868341 None:intergenic 45.0%
! CTTTTGGACGCAGAGATTGA+TGG + chr8_1:36868344-36868363 None:intergenic 45.0%
CATCAATCTCTGCGTCCAAA+AGG - chr8_1:36868342-36868361 Msa1191960:intron 45.0%
! TAATGCCAGCATGCTAGCTT+TGG - chr8_1:36868682-36868701 Msa1191960:three_prime_UTR 45.0%
!! GCATTTTGAAGGGAAGGATG+TGG + chr8_1:36868731-36868750 None:intergenic 45.0%
!! GTTGCTGCATTTTGAAGGGA+AGG + chr8_1:36868737-36868756 None:intergenic 45.0%
TCCACTTAGAATTCCAGCTC+GGG + chr8_1:36868929-36868948 None:intergenic 45.0%
ATTGCCATTGCCATTGCATC+TGG - chr8_1:36869222-36869241 Msa1191960:intron 45.0%
TTGCCATTGCCATTGCATCT+GGG - chr8_1:36869223-36869242 Msa1191960:intron 45.0%
CAGGTGATATATACCAGACC+CGG - chr8_1:36870020-36870039 Msa1191960:intron 45.0%
TTTGTTGCAGGATACGTGCT+CGG - chr8_1:36870185-36870204 Msa1191960:intron 45.0%
GTCAGGCTTCTTTCGACAAA+AGG - chr8_1:36870386-36870405 Msa1191960:intron 45.0%
AGGCTTCTTTCGACAAAAGG+TGG - chr8_1:36870389-36870408 Msa1191960:intron 45.0%
CAAAAGGTGGTCGAGACTAT+TGG - chr8_1:36870402-36870421 Msa1191960:intron 45.0%
TCTTGTGGGATCCAAATGGA+CGG - chr8_1:36870646-36870665 Msa1191960:intron 45.0%
TGACAGTTGCCCACGATTAT+TGG + chr8_1:36871030-36871049 None:intergenic 45.0%
GCTCGTCTTGTACTCAGTAT+GGG + chr8_1:36871138-36871157 None:intergenic 45.0%
AGCTCGTCTTGTACTCAGTA+TGG + chr8_1:36871139-36871158 None:intergenic 45.0%
GGATCAGTGATTCTTCCTTG+TGG + chr8_1:36871177-36871196 None:intergenic 45.0%
CAAGGAAGAATCACTGATCC+TGG - chr8_1:36871177-36871196 Msa1191960:intron 45.0%
GCTGTCTTCATCTCTCAACA+AGG - chr8_1:36871233-36871252 Msa1191960:intron 45.0%
ACTGAAAATTTCAAGGCGGG+AGG + chr8_1:36871406-36871425 None:intergenic 45.0%
GTAAACTGAGTGCAGCACTT+CGG - chr8_1:36871556-36871575 Msa1191960:three_prime_UTR 45.0%
CATTGAGGAGACTCATTACG+AGG + chr8_1:36871631-36871650 None:intergenic 45.0%
ACCAAATCACCAATGAGGCA+AGG - chr8_1:36871682-36871701 Msa1191960:three_prime_UTR 45.0%
! ACCTTGCCTCATTGGTGATT+TGG + chr8_1:36871686-36871705 None:intergenic 45.0%
AGTCAATTGCCACCCATACT+TGG + chr8_1:36871989-36872008 None:intergenic 45.0%
! AGACTGGTTGAGAGAGCTTA+CGG - chr8_1:36872188-36872207 Msa1191960:intron 45.0%
ATGTGACCACACACTCTTGT+AGG + chr8_1:36872408-36872427 None:intergenic 45.0%
TTCAAATCAACGCCAACCAC+AGG + chr8_1:36872498-36872517 None:intergenic 45.0%
GACACACAAAGCACAGACAA+CGG - chr8_1:36872518-36872537 Msa1191960:CDS 45.0%
GGACAACTTGGACTCTCCTT+TGG - chr8_1:36867691-36867710 Msa1191960:intron 50.0%
ATCACAATATCACCGGCCGA+CGG - chr8_1:36868211-36868230 Msa1191960:intron 50.0%
CAATCTCTGCGTCCAAAAGG+TGG - chr8_1:36868345-36868364 Msa1191960:intron 50.0%
TTCTTCCCCATATTGCCGAC+AGG - chr8_1:36868759-36868778 Msa1191960:three_prime_UTR 50.0%
ACCCGAGCTGGAATTCTAAG+TGG - chr8_1:36868925-36868944 Msa1191960:three_prime_UTR 50.0%
TCTCTATGCCTTGCCCAGTT+TGG - chr8_1:36869076-36869095 Msa1191960:intron 50.0%
GTCAAATTCGGGTGGCACTT+TGG - chr8_1:36869160-36869179 Msa1191960:intron 50.0%
GCAATGGCAATGGCAATGTG+TGG + chr8_1:36869219-36869238 None:intergenic 50.0%
AAGACGCCGCTACCTGAAAT+TGG - chr8_1:36869432-36869451 Msa1191960:intron 50.0%
ATCAACTTCGTATCCGGGTC+TGG + chr8_1:36870036-36870055 None:intergenic 50.0%
TACTGCAGAGTTTAGCCGGA+TGG + chr8_1:36870081-36870100 None:intergenic 50.0%
AATTGCGTGTGGAGGATGTC+CGG + chr8_1:36870606-36870625 None:intergenic 50.0%
GTTTCTGCAATTGCGTGTGG+AGG + chr8_1:36870614-36870633 None:intergenic 50.0%
! CGAGTCTTGTGGGATCCAAA+TGG - chr8_1:36870642-36870661 Msa1191960:intron 50.0%
TGGAGAGTTTGCCGTCCATT+TGG + chr8_1:36870660-36870679 None:intergenic 50.0%
AGACTGAAAACGGCACGTAC+AGG - chr8_1:36870984-36871003 Msa1191960:intron 50.0%
TTCAAGGCGGGAGGATTTCT+TGG + chr8_1:36871397-36871416 None:intergenic 50.0%
CAGCACTTCGGTAACTAGCA+CGG - chr8_1:36871568-36871587 Msa1191960:three_prime_UTR 50.0%
CGAGGTTCTCAATGTCAAGG+AGG + chr8_1:36871613-36871632 None:intergenic 50.0%
TGCAGACAACCTTGCCTCAT+TGG + chr8_1:36871694-36871713 None:intergenic 50.0%
TACTTCTTGCGTGAGCGTGA+TGG + chr8_1:36871764-36871783 None:intergenic 50.0%
! GCTTGTCCTACAAGAGTGTG+TGG - chr8_1:36872399-36872418 Msa1191960:intron 50.0%
TCCCTGCTACACTGCTACCA+AGG - chr8_1:36867583-36867602 Msa1191960:three_prime_UTR 55.0%
! GCCTTGGTAGCAGTGTAGCA+GGG + chr8_1:36867587-36867606 None:intergenic 55.0%
! CCGTGATATTTTCCGTCGGC+CGG + chr8_1:36868226-36868245 None:intergenic 55.0%
CCGGCCGACGGAAAATATCA+CGG - chr8_1:36868223-36868242 Msa1191960:intron 55.0%
CGGCCGACGGAAAATATCAC+GGG - chr8_1:36868224-36868243 Msa1191960:intron 55.0%
GGCCGACGGAAAATATCACG+GGG - chr8_1:36868225-36868244 Msa1191960:intron 55.0%
TGGCCCAGATGCAATGGCAA+TGG + chr8_1:36869229-36869248 None:intergenic 55.0%
GTTGTGTGGCCCAGATGCAA+TGG + chr8_1:36869235-36869254 None:intergenic 55.0%
! GGCCTTGGTAGCAGTGTAGC+AGG + chr8_1:36867588-36867607 None:intergenic 60.0%
CACGTACAGGTTTCAGCCCG+AGG - chr8_1:36870997-36871016 Msa1191960:intron 60.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 36867530 36872665 36867530 ID=Msa1191960;Name=Msa1191960
chr8_1 mRNA 36867530 36872665 36867530 ID=Msa1191960-mRNA-1;Parent=Msa1191960;Name=Msa1191960-mRNA-1;_AED=0.19;_eAED=0.19;_QI=0|0.85|0.87|1|0.42|0.25|8|1610|157
chr8_1 exon 36867530 36867699 36867530 ID=Msa1191960-mRNA-1:exon:12214;Parent=Msa1191960-mRNA-1
chr8_1 exon 36868487 36869051 36868487 ID=Msa1191960-mRNA-1:exon:12213;Parent=Msa1191960-mRNA-1
chr8_1 exon 36869465 36869824 36869465 ID=Msa1191960-mRNA-1:exon:12212;Parent=Msa1191960-mRNA-1
chr8_1 exon 36869955 36870000 36869955 ID=Msa1191960-mRNA-1:exon:12211;Parent=Msa1191960-mRNA-1
chr8_1 exon 36870092 36870172 36870092 ID=Msa1191960-mRNA-1:exon:12210;Parent=Msa1191960-mRNA-1
chr8_1 exon 36870728 36870785 36870728 ID=Msa1191960-mRNA-1:exon:12209;Parent=Msa1191960-mRNA-1
chr8_1 exon 36871415 36872020 36871415 ID=Msa1191960-mRNA-1:exon:12208;Parent=Msa1191960-mRNA-1
chr8_1 exon 36872468 36872665 36872468 ID=Msa1191960-mRNA-1:exon:12207;Parent=Msa1191960-mRNA-1
chr8_1 CDS 36872468 36872665 36872468 ID=Msa1191960-mRNA-1:cds;Parent=Msa1191960-mRNA-1
chr8_1 CDS 36871745 36872020 36871745 ID=Msa1191960-mRNA-1:cds;Parent=Msa1191960-mRNA-1
chr8_1 three_prime_UTR 36871415 36871744 36871415 ID=Msa1191960-mRNA-1:three_prime_utr;Parent=Msa1191960-mRNA-1
chr8_1 three_prime_UTR 36870728 36870785 36870728 ID=Msa1191960-mRNA-1:three_prime_utr;Parent=Msa1191960-mRNA-1
chr8_1 three_prime_UTR 36870092 36870172 36870092 ID=Msa1191960-mRNA-1:three_prime_utr;Parent=Msa1191960-mRNA-1
chr8_1 three_prime_UTR 36869955 36870000 36869955 ID=Msa1191960-mRNA-1:three_prime_utr;Parent=Msa1191960-mRNA-1
chr8_1 three_prime_UTR 36869465 36869824 36869465 ID=Msa1191960-mRNA-1:three_prime_utr;Parent=Msa1191960-mRNA-1
chr8_1 three_prime_UTR 36868487 36869051 36868487 ID=Msa1191960-mRNA-1:three_prime_utr;Parent=Msa1191960-mRNA-1
chr8_1 three_prime_UTR 36867530 36867699 36867530 ID=Msa1191960-mRNA-1:three_prime_utr;Parent=Msa1191960-mRNA-1
Gene Sequence

>Msa1191960

ATGGCAAAATCTGGAAATTTGGTATCCCAAAGAAGCTTCAGCTCAATATTCAATCCCTGCTACACTGCTACCAAGGCCAAAACCTTCACTTTTCTCTCTCAGTTTCACACTTACAATAATACTAGTGGTAGTGCAACCATCACTGCTTCTACCAAAAGAAAGGACAACTTGGACTCTCCTTTGGTAACTCGATATACAATTGGGAAGAACACGAGTAGGGCAACCCGCCGTCTGATCACAATATCACCGGCCGACGGAAAATATCACGGGGAATGGACATGTGATTATCTTGTATCTTTGCGAGACCTACATTTACAGGATTTGATTGAAGTTGAAGATGATCCACGTAAGAATGCACAAGTAGCCATCAATCTCTGCGTCCAAAAGGTGGTTTCATCCAAATATTTTATCCTGACTTGTGAATTAGAAATTCTAGAATTAAATTGTAATTGTAATTGTAACCAAAGGAAGTAG

Protein sequence

>Msa1191960

MAKSGNLVSQRSFSSIFNPCYTATKAKTFTFLSQFHTYNNTSGSATITASTKRKDNLDSPLVTRYTIGKNTSRATRRLITISPADGKYHGEWTCDYLVSLRDLHLQDLIEVEDDPRKNAQVAINLCVQKVVSSKYFILTCELEILELNCNCNCNQRK*