AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0260840

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0260840 MtrunA17_Chr2g0322531 94.857 350 17 1 342 691 1 349 0.0 673
Msa0260840 MtrunA17_Chr2g0322531 78.510 349 41 3 1 315 1 349 0.0 534
Msa0260840 MtrunA17_Chr2g0322551 86.325 351 46 2 342 691 1 350 0.0 592
Msa0260840 MtrunA17_Chr2g0322551 79.310 348 38 2 2 315 3 350 0.0 524
Msa0260840 MtrunA17_Chr2g0322541 86.455 347 12 2 1 312 1 347 0.0 574
Msa0260840 MtrunA17_Chr2g0322541 83.908 348 54 2 342 688 1 347 0.0 573
Msa0260840 MtrunA17_Chr8g0337371 34.912 739 348 29 52 689 128 834 1.71e-109 350
Msa0260840 MtrunA17_Chr8g0337371 40.456 351 191 11 346 691 52 389 7.42e-63 224
Msa0260840 MtrunA17_Chr7g0214831 39.244 344 203 5 346 689 6 343 7.12e-75 244
Msa0260840 MtrunA17_Chr7g0214831 43.396 265 144 3 52 313 82 343 4.39e-66 221
Msa0260840 MtrunA17_Chr8g0337471 41.379 348 190 8 346 689 4 341 2.57e-74 243
Msa0260840 MtrunA17_Chr8g0337471 43.396 265 143 4 52 313 81 341 1.69e-63 214
Msa0260840 MtrunA17_Chr8g0337361 43.020 351 179 10 346 689 63 399 3.77e-72 239
Msa0260840 MtrunA17_Chr8g0337361 44.528 265 140 4 52 313 139 399 2.56e-65 221
Msa0260840 MtrunA17_Chr8g0337491 39.437 355 196 8 347 689 5 352 9.72e-72 239
Msa0260840 MtrunA17_Chr8g0337491 37.714 350 191 8 53 397 93 420 2.12e-66 224
Msa0260840 MtrunA17_Chr8g0337451 40.922 347 193 8 346 689 4 341 1.89e-70 233
Msa0260840 MtrunA17_Chr8g0337451 45.283 265 138 4 52 313 81 341 1.35e-62 212
Msa0260840 MtrunA17_Chr8g0337481 44.484 281 143 6 411 689 13 282 1.13e-68 226
Msa0260840 MtrunA17_Chr8g0337481 43.396 265 143 4 52 313 22 282 5.14e-65 216
Msa0260840 MtrunA17_Chr2g0307121 34.770 348 212 9 346 687 3 341 5.98e-60 205
Msa0260840 MtrunA17_Chr2g0307121 38.516 283 163 5 32 311 67 341 1.24e-57 199
Msa0260840 MtrunA17_Chr4g0043061 37.677 353 200 10 344 689 8 347 3.08e-57 197
Msa0260840 MtrunA17_Chr4g0043061 42.264 265 146 4 52 313 87 347 5.99e-57 197
Msa0260840 MtrunA17_Chr8g0335881 41.485 229 116 8 346 567 4 221 3.72e-37 138
Msa0260840 MtrunA17_Chr8g0335881 42.553 141 76 3 52 189 80 218 5.72e-28 112
Msa0260840 MtrunA17_Chr4g0045061 33.197 244 150 7 76 313 386 622 3.44e-25 110
Msa0260840 MtrunA17_Chr4g0045061 30.522 249 156 7 447 689 385 622 5.70e-22 100
Msa0260840 MtrunA17_Chr5g0445921 38.462 130 78 1 560 689 8 135 1.62e-24 99.8
Msa0260840 MtrunA17_Chr5g0445921 39.370 127 75 1 187 313 11 135 2.68e-24 99.0
Msa0260840 MtrunA17_Chr4g0045041 32.377 244 152 6 76 313 386 622 2.69e-23 105
Msa0260840 MtrunA17_Chr4g0045041 30.120 249 157 6 447 689 385 622 4.52e-21 98.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0260840 AT5G16970.1 41.056 341 176 10 360 689 16 342 2.53e-71 236
Msa0260840 AT5G16970.1 44.403 268 137 6 52 313 81 342 1.52e-63 215
Msa0260840 AT1G65560.1 40.857 350 194 8 345 689 6 347 1.18e-70 234
Msa0260840 AT1G65560.1 46.067 267 137 4 52 313 83 347 5.42e-62 211
Msa0260840 AT3G03080.1 40.793 353 186 11 346 689 9 347 5.11e-68 227
Msa0260840 AT3G03080.1 44.151 265 141 4 52 313 87 347 6.07e-62 211
Msa0260840 AT5G16990.1 40.179 336 185 9 360 689 15 340 1.11e-67 226
Msa0260840 AT5G16990.1 43.609 266 142 5 52 313 79 340 3.85e-62 211
Msa0260840 AT1G26320.1 40.173 346 189 10 346 684 9 343 1.21e-66 223
Msa0260840 AT1G26320.1 40.794 277 158 3 35 308 70 343 2.12e-59 204
Msa0260840 AT5G17000.1 40.663 332 174 9 367 689 25 342 2.70e-66 222
Msa0260840 AT5G17000.1 41.958 286 149 6 41 313 61 342 1.09e-61 210
Msa0260840 AT5G37940.1 39.233 339 186 9 360 689 23 350 7.27e-65 219
Msa0260840 AT5G37940.1 43.494 269 138 6 52 313 89 350 8.24e-60 205
Msa0260840 AT5G16960.2 39.710 345 186 9 352 689 14 343 1.87e-64 217
Msa0260840 AT5G16960.2 43.609 266 142 5 52 313 82 343 7.95e-59 202
Msa0260840 AT5G16960.1 39.710 345 186 9 352 689 14 343 1.87e-64 217
Msa0260840 AT5G16960.1 43.609 266 142 5 52 313 82 343 7.95e-59 202
Msa0260840 AT5G37980.1 39.755 327 180 8 372 689 32 350 5.55e-64 216
Msa0260840 AT5G37980.1 43.866 269 137 6 52 313 89 350 1.83e-60 207
Msa0260840 AT5G38000.1 39.450 327 181 8 372 689 32 350 9.81e-64 216
Msa0260840 AT5G38000.1 43.123 269 139 6 52 313 89 350 9.71e-60 205
Msa0260840 AT1G26320.2 39.595 346 186 11 346 684 9 338 3.50e-63 214
Msa0260840 AT1G26320.2 40.072 277 155 4 35 308 70 338 7.82e-56 194
Msa0260840 AT1G65560.2 46.067 267 137 4 52 313 7 271 6.80e-63 211
Msa0260840 AT1G65560.2 44.322 273 147 4 419 689 2 271 3.23e-62 209
Msa0260840 AT5G38000.3 39.365 315 174 8 372 677 32 338 3.99e-60 206
Msa0260840 AT5G38000.3 43.191 257 132 6 52 301 89 338 4.19e-56 195
Msa0260840 AT5G16980.2 38.591 298 168 5 19 313 17 302 4.36e-59 201
Msa0260840 AT5G16980.2 44.749 219 118 2 471 689 87 302 6.55e-57 196
Msa0260840 AT3G59845.1 38.095 357 200 10 342 689 1 345 8.45e-59 202
Msa0260840 AT3G59845.1 40.000 285 160 4 32 313 69 345 1.47e-54 191
Msa0260840 AT5G16980.1 46.411 209 110 1 105 313 30 236 2.51e-58 197
Msa0260840 AT5G16980.1 44.749 219 118 2 471 689 21 236 1.19e-57 195
Msa0260840 AT5G16980.3 46.411 209 110 1 105 313 30 236 2.51e-58 197
Msa0260840 AT5G16980.3 44.749 219 118 2 471 689 21 236 1.19e-57 195
Msa0260840 AT5G38000.2 37.309 327 169 9 372 689 32 331 7.61e-54 188
Msa0260840 AT5G38000.2 40.977 266 130 6 52 313 89 331 4.61e-53 186
Msa0260840 AT3G59845.2 43.460 237 128 3 80 313 10 243 3.89e-52 181
Msa0260840 AT3G59845.2 42.982 228 127 2 462 689 19 243 7.71e-52 180
Msa0260840 AT5G17000.2 41.063 207 102 7 367 564 25 220 1.30e-33 129
Msa0260840 AT5G17000.2 41.104 163 81 5 41 190 61 221 1.49e-26 109
Msa0260840 AT1G49670.1 31.707 246 151 8 76 313 382 618 3.34e-22 102
Msa0260840 AT1G49670.1 30.120 249 157 6 447 689 381 618 3.38e-20 95.5
Msa0260840 AT1G49670.2 33.000 200 124 6 120 313 446 641 1.46e-19 93.6
Msa0260840 AT1G49670.2 28.788 264 164 6 447 689 381 641 4.71e-17 85.9
Msa0260840 AT4G21580.1 28.958 259 168 9 435 688 77 324 3.36e-13 71.6
Msa0260840 AT4G21580.1 29.297 256 167 9 63 312 77 324 3.62e-12 68.6
Msa0260840 AT4G21580.2 28.846 260 169 9 435 689 44 292 3.66e-13 71.2
Msa0260840 AT4G21580.2 29.183 257 168 9 63 313 44 292 3.47e-12 68.2

Find 166 sgRNAs with CRISPR-Local

Find 490 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAAATTATCTCGGTTCTTT+AGG 0.209039 2_2:+58729764 Msa0260840:CDS
AAGCTCATCAAAGAGAATTT+TGG 0.226510 2_2:+58731005 Msa0260840:CDS
GTTGATATTGTGGAATAAAA+AGG 0.237797 2_2:-58729344 None:intergenic
TACCCTCTTCTGACATAATT+AGG 0.243258 2_2:+58724968 Msa0260840:CDS
TAAGTATATTTCCATATCTT+TGG 0.251947 2_2:-58726817 None:intergenic
TCAACGGCTAGATGGTTATC+TGG 0.283090 2_2:-58724548 None:intergenic
AGGAAAATTGATCCTGCTAA+TGG 0.294618 2_2:+58724988 Msa0260840:CDS
AAATCATATTTGCATCGTTT+TGG 0.310312 2_2:+58732145 Msa0260840:CDS
AACACATTGGATCCTGGCTT+TGG 0.311058 2_2:-58730260 None:intergenic
CGAATTGGACATGGGAGATT+TGG 0.315863 2_2:+58729131 Msa0260840:CDS
GTGTTCATATCTGCTGCTTC+TGG 0.322794 2_2:+58730278 Msa0260840:CDS
CTCACTGTATTTACTATCCT+TGG 0.324250 2_2:-58729639 None:intergenic
GTGATTGTTCCGCGAAGATA+TGG 0.324490 2_2:-58729306 None:intergenic
GAATCATATTGGGATCGTTT+TGG 0.328570 2_2:+58726786 Msa0260840:CDS
ATTTCTAATGCCTTCTCTTT+CGG 0.329200 2_2:-58732074 None:intergenic
AACACATGTGATCCTGGTTT+TGG 0.331396 2_2:-58725578 None:intergenic
AAACTCATTAAAGAGGAATT+AGG 0.333739 2_2:+58725801 Msa0260840:CDS
TCAACGGCTAGATGGTCTTC+AGG 0.338735 2_2:-58729261 None:intergenic
GTTATCTGGGATTGAATCAT+TGG 0.347572 2_2:-58724534 None:intergenic
ATTGCACATTGCATCCGAAT+TGG 0.361454 2_2:+58729116 Msa0260840:CDS
CATTAGAAATCTTCTGAATA+TGG 0.361827 2_2:+58726728 Msa0260840:CDS
AGCGGGGTTTGCAGCATGGC+TGG 0.365376 2_2:+58725535 Msa0260840:CDS
GGTGAGGATGGAAGGCTATA+TGG 0.372074 2_2:+58732120 Msa0260840:CDS
TCCACAATATCAACTTAATC+AGG 0.375511 2_2:+58729353 Msa0260840:CDS
TCCGAGGTTGGAACACCTTC+AGG 0.383872 2_2:-58729189 None:intergenic
TTACAACATTTGCAGTTGTA+AGG 0.385135 2_2:+58729606 Msa0260840:CDS
AAAAGTTGTTGTTCAAGTTA+AGG 0.388021 2_2:+58732294 Msa0260840:CDS
TCTGAGGTTGGAACACCTTC+AGG 0.388635 2_2:-58724476 None:intergenic
ACACATTGGATCCTGGCTTT+GGG 0.390179 2_2:-58730259 None:intergenic
GGAAAATTGATCCTGCTAAT+GGG 0.391945 2_2:+58724989 Msa0260840:CDS
AATGTTTGAGTGTCTGCAAT+TGG 0.414832 2_2:-58729096 None:intergenic
AAGGCTTGTCTATGATATAT+AGG 0.415410 2_2:-58729071 None:intergenic
GATGATATCTCAATATAATA+AGG 0.417882 2_2:+58731914 Msa0260840:CDS
CAAATCTCCCATGTCCAATT+CGG 0.423836 2_2:-58729130 None:intergenic
TGCTAAGATCCGAGGGTGTC+GGG 0.424438 2_2:+58725646 Msa0260840:CDS
GGTGGGAAAGGAGGTGAGGA+TGG 0.424678 2_2:+58732108 Msa0260840:CDS
AATGTTGGAGCTAGAGAATA+AGG 0.425223 2_2:-58726910 None:intergenic
CCAAAGAGTAAAATCAATAT+CGG 0.426147 2_2:+58732217 Msa0260840:CDS
CCTGGGTTCGCAGCATGGTT+AGG 0.428468 2_2:+58730218 Msa0260840:CDS
TTTCTAATTATATGAAAAGA+AGG 0.431114 2_2:-58729713 None:intergenic
TCAAAGAATAAAATAAATAT+CGG 0.432706 2_2:+58726858 Msa0260840:CDS
ATTTCACTGTCGGATTATCT+TGG 0.434743 2_2:+58725012 Msa0260840:CDS
GTGTTCATATCTGCTGCATC+TGG 0.436045 2_2:+58725596 Msa0260840:CDS
GGAGAGTTTCAACGGCTAGA+TGG 0.438365 2_2:-58724556 None:intergenic
ACAATCACCGGCACCCTTGA+AGG 0.439753 2_2:+58729321 Msa0260840:CDS
TAAATAATTTCAGGAGTACC+TGG 0.440097 2_2:+58730200 Msa0260840:intron
GGAGAGTTTCAACGGCTAGA+TGG 0.442497 2_2:-58729269 None:intergenic
TGAACAATTGCAGGAGTAGC+GGG 0.452858 2_2:+58725518 Msa0260840:intron
CGCAGCATGGTTAGGAATAG+AGG 0.456840 2_2:+58730226 Msa0260840:CDS
TTAGGTGAAACTCATTAAAG+AGG 0.460079 2_2:+58725794 Msa0260840:intron
AATGATATCTCAATATAATC+AGG 0.460646 2_2:+58726573 Msa0260840:CDS
ATCCGAGGGTGTCGGGTCAT+CGG 0.461299 2_2:+58725653 Msa0260840:CDS
TGTAGGGTCATTGGCAGCAC+TGG 0.462075 2_2:+58730344 Msa0260840:CDS
AGGTAAACATCAATACCATC+AGG 0.462166 2_2:-58731816 None:intergenic
GCTTTCTACCAAATCTTCCA+TGG 0.463126 2_2:-58724426 None:intergenic
GGAAAGGAGGTGAGGATGGA+AGG 0.464290 2_2:+58732112 Msa0260840:CDS
GATAGTGAAATCCCATTAGC+AGG 0.467976 2_2:-58729743 None:intergenic
TGGCTGGGAATAGAGGTAAT+AGG 0.471384 2_2:+58725551 Msa0260840:CDS
TTGCTAAGATACGAGGATGT+AGG 0.473300 2_2:+58730327 Msa0260840:CDS
TTCTAGCATGCTTGTTGACA+TGG 0.473843 2_2:-58726537 None:intergenic
TGCAGCATGGCTGGGAATAG+AGG 0.473933 2_2:+58725544 Msa0260840:CDS
AAGCACGGGCTCCGATGATA+AGG 0.479614 2_2:+58725676 Msa0260840:CDS
CGTAACCATTCCCATTCAAA+AGG 0.480702 2_2:-58724927 None:intergenic
CATGCTAGAATACCTCTTTG+TGG 0.481113 2_2:+58726550 Msa0260840:CDS
ATGCTAGAATACCACTTTGT+GGG 0.481843 2_2:+58731892 Msa0260840:CDS
GTGTCGGGTCATCGGAAGCA+CGG 0.483946 2_2:+58725661 Msa0260840:CDS
CGAGACCATATCCATTCAAA+AGG 0.487436 2_2:-58729670 None:intergenic
ATACGAGGATGTAGGGTCAT+TGG 0.487753 2_2:+58730335 Msa0260840:CDS
TGTCGGGTCATCGGAAGCAC+GGG 0.487784 2_2:+58725662 Msa0260840:CDS
TCCGTTGATCCATATCTTCG+CGG 0.487808 2_2:+58729297 Msa0260840:CDS
CAACGGCTAGATGGTTATCT+GGG 0.490879 2_2:-58724547 None:intergenic
CAAGAGAAAGAGAGACGGTC+CGG 0.490909 2_2:-58724511 None:intergenic
GTACTAGGAGACCCAAAGCC+AGG 0.490910 2_2:+58730248 Msa0260840:CDS
CAACGGCTAGATGGTCTTCA+GGG 0.493384 2_2:-58729260 None:intergenic
CATTGCATCCGAATTGGACA+TGG 0.494799 2_2:+58729122 Msa0260840:CDS
TCTGCTGCTTCTGGTGCTGT+TGG 0.500057 2_2:+58730287 Msa0260840:CDS
GGTGCTGTTGGTATGAATGC+TGG 0.505825 2_2:+58730299 Msa0260840:CDS
TGCTAATGGGATTTCACTGT+CGG 0.506781 2_2:+58725002 Msa0260840:CDS
GGTGCTGTTGGTATGAGTGC+TGG 0.507125 2_2:+58725617 Msa0260840:CDS
TTGAACAATTGCAGGAGTAG+CGG 0.509075 2_2:+58725517 Msa0260840:intron
GATATGAACACATGTGATCC+TGG 0.511175 2_2:-58725584 None:intergenic
TCCTGAAGGTGTTCCAACCT+CGG 0.512018 2_2:+58729188 Msa0260840:CDS
TTATTCTCTAGCTCCAACAT+TGG 0.513817 2_2:+58726912 Msa0260840:CDS
TTCTAGCATTCTTGTTGACA+TGG 0.514997 2_2:-58731878 None:intergenic
GACAGTGAAATCCCATTAGC+AGG 0.516499 2_2:-58725000 None:intergenic
GTCTTCAGGGATTGAATCAT+CGG 0.517771 2_2:-58729247 None:intergenic
TCTTCTGAATATGGTGGGAA+AGG 0.518305 2_2:+58726737 Msa0260840:CDS
TTGCTAAGATCCGAGGGTGT+CGG 0.518347 2_2:+58725645 Msa0260840:CDS
TGGTTAGGAATAGAGGTACT+AGG 0.520082 2_2:+58730233 Msa0260840:CDS
TGCTAAGATACGAGGATGTA+GGG 0.520424 2_2:+58730328 Msa0260840:CDS
AGTTTAAGATGATCCGAGGT+TGG 0.522459 2_2:-58729201 None:intergenic
TCTTCTGAACATGGTGGGAA+AGG 0.523236 2_2:+58732096 Msa0260840:CDS
ATATGGTGGGAAAGGAAGTA+AGG 0.523824 2_2:+58726745 Msa0260840:CDS
GGTGGGAAAGGAAGTAAGGA+TGG 0.524544 2_2:+58726749 Msa0260840:CDS
AATGCTAGAATACCACTTTG+TGG 0.527279 2_2:+58731891 Msa0260840:CDS
GAGTAGCGGGGTTTGCAGCA+TGG 0.527507 2_2:+58725531 Msa0260840:CDS
AGTTTAAGATGATCTGAGGT+TGG 0.528062 2_2:-58724488 None:intergenic
TCTGCTGCATCTGGTGCTGT+TGG 0.528533 2_2:+58725605 Msa0260840:CDS
ATTTCACTATCAAATTATCT+CGG 0.529600 2_2:+58729755 Msa0260840:CDS
TACAACATTTGCAGTTGTAA+GGG 0.533855 2_2:+58729607 Msa0260840:CDS
ATGTTTGAGTGTCTGCAATT+GGG 0.533964 2_2:-58729095 None:intergenic
GATATGAACACATTGGATCC+TGG 0.535102 2_2:-58730266 None:intergenic
AAAAGTTGTTGTTCAAGTGA+AGG 0.535612 2_2:+58726935 Msa0260840:CDS
GCGGGGTTTGCAGCATGGCT+GGG 0.538340 2_2:+58725536 Msa0260840:CDS
TGTAAGAGTAATTCGATCAA+AGG 0.538364 2_2:+58724879 Msa0260840:CDS
TGAGTGTCTGCAATTGGGCA+AGG 0.538376 2_2:-58729090 None:intergenic
AGATAAACATCAATACCATC+AGG 0.538763 2_2:-58726475 None:intergenic
CAGCACTGGCTCTGATGAGA+AGG 0.546270 2_2:+58730358 Msa0260840:CDS
TTTCCTAATTATGTCAGAAG+AGG 0.553565 2_2:-58724971 None:intergenic
TTCCTAATTATGTCAGAAGA+GGG 0.553839 2_2:-58724970 None:intergenic
TTCCGATGACCCGACACCCT+CGG 0.556508 2_2:-58725655 None:intergenic
ATTTGGTAGAAAACAAAGAA+TGG 0.556601 2_2:+58729148 Msa0260840:CDS
TATCTTCGCGGAACAATCAC+CGG 0.558813 2_2:+58729309 Msa0260840:CDS
CATTAGAAATCTTCTGAACA+TGG 0.559955 2_2:+58732087 Msa0260840:CDS
GATGTTTATCTTGACAATGT+TGG 0.561796 2_2:+58726487 Msa0260840:CDS
AAGATAAGTTACCTTATCAT+CGG 0.564095 2_2:-58725687 None:intergenic
ATTTGGTAGAAAGCAGAGAA+TGG 0.564359 2_2:+58724435 Msa0260840:CDS
TTAGCTGAATATTGTCCTGA+AGG 0.566892 2_2:+58724461 Msa0260840:CDS
TAGAAATCTTCTGAATATGG+TGG 0.567083 2_2:+58726731 Msa0260840:CDS
GATATGGATCAACGGAGAGA+AGG 0.573244 2_2:-58729290 None:intergenic
AGAAATCTTCTGAATATGGT+GGG 0.577910 2_2:+58726732 Msa0260840:CDS
AGAAATCTTCTGAACATGGT+GGG 0.577910 2_2:+58732091 Msa0260840:CDS
GTTTATCTTGACAATGTTGG+TGG 0.579018 2_2:+58726490 Msa0260840:CDS
CCTCAGATCATCTTAAACTC+CGG 0.581406 2_2:+58724492 Msa0260840:CDS
ATGGAAATATACTTACAAGA+AGG 0.582171 2_2:+58726825 Msa0260840:CDS
CCTAACCATGCTGCGAACCC+AGG 0.583354 2_2:-58730218 None:intergenic
ACCTGATTAAGTTGATATTG+TGG 0.584585 2_2:-58729354 None:intergenic
GGGAAAGGAAGTAAGGATGG+AGG 0.587049 2_2:+58726752 Msa0260840:CDS
AAGGAAAGTAAATACACTGA+AGG 0.588385 2_2:+58724898 Msa0260840:CDS
AGCAGCAGATATGAACACAT+TGG 0.591491 2_2:-58730273 None:intergenic
GAGTACCTGGGTTCGCAGCA+TGG 0.592297 2_2:+58730213 Msa0260840:CDS
TGTAAGGGTAATTCGATCCA+AGG 0.592533 2_2:+58729622 Msa0260840:CDS
AAATAATTTCAGGAGTACCT+GGG 0.593770 2_2:+58730201 Msa0260840:intron
AAGGATAGTAAATACAGTGA+GGG 0.594157 2_2:+58729641 Msa0260840:CDS
AATTACAGACTTGCTTAAAG+CGG 0.595010 2_2:-58725868 None:intergenic
TCTGAACATGGTGGGAAAGG+AGG 0.598581 2_2:+58732099 Msa0260840:CDS
GTAATAGGAGATCCAAAACC+AGG 0.599727 2_2:+58725566 Msa0260840:CDS
CCGGAGTTTAAGATGATCTG+AGG 0.600515 2_2:-58724492 None:intergenic
GGAAAGGAAGTAAGGATGGA+GGG 0.601883 2_2:+58726753 Msa0260840:CDS
GCCAACTTGCTAAGATCCGA+GGG 0.602595 2_2:+58725639 Msa0260840:CDS
TGAGATATCATTCCACAAAG+AGG 0.604157 2_2:-58726562 None:intergenic
GGCCAACTTGCTAAGATCCG+AGG 0.609228 2_2:+58725638 Msa0260840:CDS
ACCCTCGGATCTTAGCAAGT+TGG 0.610400 2_2:-58725640 None:intergenic
AGGATAGTAAATACAGTGAG+GGG 0.615694 2_2:+58729642 Msa0260840:CDS
GGAGAGAAGGAGAGTTTCAA+CGG 0.616397 2_2:-58729277 None:intergenic
GTTTACCTTGACAATGTTGG+TGG 0.618276 2_2:+58731831 Msa0260840:CDS
GTAGCTGCATACTGTCCTGA+AGG 0.620585 2_2:+58729174 Msa0260840:CDS
GATGTTTACCTTGACAATGT+TGG 0.620700 2_2:+58731828 Msa0260840:CDS
TAGGTTTGGACCGAAAGAGA+AGG 0.627714 2_2:+58732064 Msa0260840:intron
TGAGATATCATCCCACAAAG+TGG 0.634211 2_2:-58731903 None:intergenic
GGTAAACATCAATACCATCA+GGG 0.638329 2_2:-58731815 None:intergenic
ATTGCATCCGAATTGGACAT+GGG 0.640618 2_2:+58729123 Msa0260840:CDS
TAGGTTTGGACTGAAAGAGA+AGG 0.645087 2_2:+58726705 Msa0260840:intron
TAGAAATCTTCTGAACATGG+TGG 0.647455 2_2:+58732090 Msa0260840:CDS
GCGGAGTTTAAGATGATCCG+AGG 0.648505 2_2:-58729205 None:intergenic
GAACAATTGCAGGAGTAGCG+GGG 0.654427 2_2:+58725519 Msa0260840:intron
CAAGGATAGTAAATACAGTG+AGG 0.660082 2_2:+58729640 Msa0260840:CDS
TCCGCGAAGATATGGATCAA+CGG 0.662990 2_2:-58729298 None:intergenic
GGATAGTAAATACAGTGAGG+GGG 0.664890 2_2:+58729643 Msa0260840:CDS
GAATTACGACTTGCTTAAAG+CGG 0.671434 2_2:-58731072 None:intergenic
ACATGGTGGGAAAGGAGGTG+AGG 0.678852 2_2:+58732104 Msa0260840:CDS
GGTCAGCTTGCTAAGATACG+AGG 0.707694 2_2:+58730320 Msa0260840:CDS
ATTGGCAAGAGAAAGAGAGA+CGG 0.714842 2_2:-58724516 None:intergenic
CGACGGTTTCAATTACAATG+CGG 0.732098 2_2:+58725830 Msa0260840:CDS
GAGGAATTAGGATATGACGA+CGG 0.738552 2_2:+58725813 Msa0260840:CDS
CAAGAGAAAGAGAAACAGTG+CGG 0.754469 2_2:-58729224 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TACAATTTTTGTTTTTTTTT+TGG + chr2_2:58725767-58725786 Msa0260840:intron 10.0%
!! TCAAAGAATAAAATAAATAT+CGG + chr2_2:58726858-58726877 Msa0260840:CDS 10.0%
!!! TAAAAAGTTTCAATTTTATA+AGG - chr2_2:58728107-58728126 None:intergenic 10.0%
!! AAACTTATTAAAATTAAGTA+AGG - chr2_2:58728138-58728157 None:intergenic 10.0%
!! AAGATAAAATTAACAAAATT+TGG + chr2_2:58728358-58728377 Msa0260840:intron 10.0%
!!! TATTGATATATTTTAATTGT+GGG - chr2_2:58728626-58728645 None:intergenic 10.0%
!! AAATATATCAATAGTTAATA+AGG + chr2_2:58728633-58728652 Msa0260840:intron 10.0%
!! TACATTTATTTATTAGAATT+AGG + chr2_2:58729376-58729395 Msa0260840:intron 10.0%
!! ACATTTATTTATTAGAATTA+GGG + chr2_2:58729377-58729396 Msa0260840:intron 10.0%
!!! GTATTTTTTTTAATAAAAAG+TGG + chr2_2:58729484-58729503 Msa0260840:intron 10.0%
!! ATATATATATATATATTTGC+AGG + chr2_2:58729580-58729599 Msa0260840:intron 10.0%
!!! TTTTATTCAATTAGTTTAAA+AGG + chr2_2:58729870-58729889 Msa0260840:intron 10.0%
!! TAAAATGAAATTTGTATTTA+AGG + chr2_2:58730123-58730142 Msa0260840:intron 10.0%
!! TATTATATAAAGAAAATAAG+TGG - chr2_2:58730397-58730416 None:intergenic 10.0%
!!! CTTATTTTCTTTATATAATA+TGG + chr2_2:58730397-58730416 Msa0260840:intron 10.0%
!!! AAATTTTTGAAGTATAAAAT+TGG + chr2_2:58731409-58731428 Msa0260840:intron 10.0%
!!! AATTTTTGAAGTATAAAATT+GGG + chr2_2:58731410-58731429 Msa0260840:intron 10.0%
!!! TTTTTATGTGAAATTTTATA+GGG - chr2_2:58731688-58731707 None:intergenic 10.0%
!!! ATTAGAAAATTGAAATTTTT+GGG - chr2_2:58732020-58732039 None:intergenic 10.0%
!!! AATTAGAAAATTGAAATTTT+TGG - chr2_2:58732021-58732040 None:intergenic 10.0%
!! TAATATGAATATATATTTGC+AGG + chr2_2:58724834-58724853 Msa0260840:intron 15.0%
!!! AATTTTTATCAAAATCACAA+TGG + chr2_2:58725155-58725174 Msa0260840:intron 15.0%
!!! ATAAAACGCTTAATAATTTT+TGG + chr2_2:58725385-58725404 Msa0260840:intron 15.0%
!!! TGTTTTTTTTTTGGTTTTTT+AGG + chr2_2:58725776-58725795 Msa0260840:intron 15.0%
!! TTTATACAACAATATCTAAA+AGG - chr2_2:58725922-58725941 None:intergenic 15.0%
!!! TTTTAGATATTGTTGTATAA+AGG + chr2_2:58725921-58725940 Msa0260840:intron 15.0%
!!! AAATCAATGCTTTTTTTTTT+TGG - chr2_2:58726660-58726679 None:intergenic 15.0%
!! TCTAATTATAGTTATAATGT+TGG + chr2_2:58726680-58726699 Msa0260840:intron 15.0%
!!! AATTGAATAAGTTTGAAATT+TGG - chr2_2:58727846-58727865 None:intergenic 15.0%
!! TTTCAAACTTATTCAATTTA+AGG + chr2_2:58727848-58727867 Msa0260840:intron 15.0%
!! TTCAAACTTATTCAATTTAA+GGG + chr2_2:58727849-58727868 Msa0260840:intron 15.0%
!! AATTAAACAAATTTGAATTG+AGG + chr2_2:58728485-58728504 Msa0260840:intron 15.0%
!! AGAACTATTAAAATTATGTA+AGG + chr2_2:58728552-58728571 Msa0260840:intron 15.0%
!!! CTATTGATATATTTTAATTG+TGG - chr2_2:58728627-58728646 None:intergenic 15.0%
!! ATTTAATCAGTGTTAATTAA+TGG + chr2_2:58728810-58728829 Msa0260840:intron 15.0%
!! TTTAATCAGTGTTAATTAAT+GGG + chr2_2:58728811-58728830 Msa0260840:intron 15.0%
!! ATTAACAAATATTTGAATAC+AGG + chr2_2:58728837-58728856 Msa0260840:intron 15.0%
!! TTTCTAATTATATGAAAAGA+AGG - chr2_2:58729716-58729735 None:intergenic 15.0%
!! AAAAAAATACTCATATTTGA+TGG + chr2_2:58730078-58730097 Msa0260840:intron 15.0%
!!! ATTTCTAAAAAAAAATTGGT+GGG + chr2_2:58731179-58731198 Msa0260840:intron 15.0%
!!! TCATTTAACGTTTTTTAAAT+CGG - chr2_2:58731265-58731284 None:intergenic 15.0%
!!! ATTTTTGAAGTATAAAATTG+GGG + chr2_2:58731411-58731430 Msa0260840:intron 15.0%
!!! CTTTTTATGTGAAATTTTAT+AGG - chr2_2:58731689-58731708 None:intergenic 15.0%
!! TTAGTAAATTGTTATAATGT+TGG + chr2_2:58732039-58732058 Msa0260840:intron 15.0%
!!! TGTTTAACTTGAAAAAATCA+CGG + chr2_2:58725099-58725118 Msa0260840:intron 20.0%
!!! TTTAGATCATATGTTGTTTT+TGG + chr2_2:58726014-58726033 Msa0260840:intron 20.0%
!! AAAATGATATATATAGCGAA+AGG - chr2_2:58726333-58726352 None:intergenic 20.0%
!! TACTTCAAAATTTAGTGTAA+TGG - chr2_2:58726356-58726375 None:intergenic 20.0%
!! AATGATATCTCAATATAATC+AGG + chr2_2:58726573-58726592 Msa0260840:CDS 20.0%
!! TATAGTTATAATGTTGGTAT+AGG + chr2_2:58726686-58726705 Msa0260840:intron 20.0%
!!! TTTTATGCTAGAATCATATT+GGG + chr2_2:58726776-58726795 Msa0260840:CDS 20.0%
!! TAAGTATATTTCCATATCTT+TGG - chr2_2:58726820-58726839 None:intergenic 20.0%
!! AATTATATTATTCCACTTGT+AGG + chr2_2:58727047-58727066 Msa0260840:intron 20.0%
!! ATTATATTATTCCACTTGTA+GGG + chr2_2:58727048-58727067 Msa0260840:intron 20.0%
!! AATAGCACTTAAAATATTGA+GGG + chr2_2:58727667-58727686 Msa0260840:intron 20.0%
!! AATAGCACTTAAAATATTGA+GGG + chr2_2:58727667-58727686 Msa0260840:intron 20.0%
!! AAAAAATTGTCGTAATTTAG+TGG - chr2_2:58727886-58727905 None:intergenic 20.0%
!!! TAGAAGTAATTTTTTTTGCA+GGG - chr2_2:58728167-58728186 None:intergenic 20.0%
!!! TTAGAAGTAATTTTTTTTGC+AGG - chr2_2:58728168-58728187 None:intergenic 20.0%
!!! AACAAACTTTGTTTTTAACA+GGG - chr2_2:58728198-58728217 None:intergenic 20.0%
!!! AAACAAACTTTGTTTTTAAC+AGG - chr2_2:58728199-58728218 None:intergenic 20.0%
!! TTAATCAGTGTTAATTAATG+GGG + chr2_2:58728812-58728831 Msa0260840:intron 20.0%
!! ATTTCACTATCAAATTATCT+CGG + chr2_2:58729755-58729774 Msa0260840:CDS 20.0%
!! TTACAAAACAAAATTTCATG+AGG - chr2_2:58730440-58730459 None:intergenic 20.0%
!! CTAAAGAAATGATAAAAACT+TGG - chr2_2:58730473-58730492 None:intergenic 20.0%
!! TTATTTATTTCGATGCTAAT+AGG - chr2_2:58730554-58730573 None:intergenic 20.0%
!!! TTTTGTGATTAAAATAGAGA+GGG - chr2_2:58730644-58730663 None:intergenic 20.0%
!! AAAAAGATAGCTAATACATT+TGG - chr2_2:58730667-58730686 None:intergenic 20.0%
!!! TTAAGTTTTTGTTTTGTGTT+CGG + chr2_2:58730700-58730719 Msa0260840:intron 20.0%
!! AAGAATACATAAAGAGAAAA+AGG - chr2_2:58731100-58731119 None:intergenic 20.0%
!!! CTCCATTTCTAAAAAAAAAT+TGG + chr2_2:58731175-58731194 Msa0260840:intron 20.0%
!!! CACCAATTTTTTTTTAGAAA+TGG - chr2_2:58731180-58731199 None:intergenic 20.0%
!!! CATTTCTAAAAAAAAATTGG+TGG + chr2_2:58731178-58731197 Msa0260840:intron 20.0%
!!! TTTCTAAAAAAAAATTGGTG+GGG + chr2_2:58731180-58731199 Msa0260840:intron 20.0%
!! TTGATTTATAAAGTTCTTTC+CGG - chr2_2:58731237-58731256 None:intergenic 20.0%
!! TTGCAATTTATCTGTATTTA+TGG + chr2_2:58731614-58731633 Msa0260840:intron 20.0%
!! GATGATATCTCAATATAATA+AGG + chr2_2:58731914-58731933 Msa0260840:CDS 20.0%
!! AATTGTTATAATGTTGGTAT+AGG + chr2_2:58732045-58732064 Msa0260840:intron 20.0%
! TCGTATGTATATGCATATAT+TGG + chr2_2:58724795-58724814 Msa0260840:intron 25.0%
! TGCAAACTTAATTCTCTATA+GGG - chr2_2:58725079-58725098 None:intergenic 25.0%
! ATGCAAACTTAATTCTCTAT+AGG - chr2_2:58725080-58725099 None:intergenic 25.0%
! GTTTAAATTCTATATGAGGT+TGG - chr2_2:58725204-58725223 None:intergenic 25.0%
! CTAGGTTTAAATTCTATATG+AGG - chr2_2:58725208-58725227 None:intergenic 25.0%
!!! TTCTAGAAGTACTTATAAAC+AGG - chr2_2:58725270-58725289 None:intergenic 25.0%
! TTAATTAGTTGAACAATTGC+AGG + chr2_2:58725509-58725528 Msa0260840:intron 25.0%
! AAGATAAGTTACCTTATCAT+CGG - chr2_2:58725690-58725709 None:intergenic 25.0%
! CATACATACATTACAAGAAA+AGG - chr2_2:58725718-58725737 None:intergenic 25.0%
! AAACTCATTAAAGAGGAATT+AGG + chr2_2:58725801-58725820 Msa0260840:CDS 25.0%
!!! TTTTAAAAAAACCCGAGTTT+AGG - chr2_2:58726040-58726059 None:intergenic 25.0%
! GCTCTTTAGTAATTTACATT+TGG - chr2_2:58726146-58726165 None:intergenic 25.0%
! GAACTGTAAATTACTTTACA+CGG - chr2_2:58726224-58726243 None:intergenic 25.0%
! TTTATGTCATGAATCTTTCT+AGG - chr2_2:58726389-58726408 None:intergenic 25.0%
!! TATATAGACTAGAATTTTGC+AGG + chr2_2:58726446-58726465 Msa0260840:intron 25.0%
! TTATAATGTTGGTATAGGTT+TGG + chr2_2:58726691-58726710 Msa0260840:intron 25.0%
! CATTAGAAATCTTCTGAATA+TGG + chr2_2:58726728-58726747 Msa0260840:CDS 25.0%
!! GTTTTATGCTAGAATCATAT+TGG + chr2_2:58726775-58726794 Msa0260840:CDS 25.0%
! ATGGAAATATACTTACAAGA+AGG + chr2_2:58726825-58726844 Msa0260840:CDS 25.0%
! ATATACAATATTTGGACACT+AGG - chr2_2:58726961-58726980 None:intergenic 25.0%
! GATCAAGCATATACAATATT+TGG - chr2_2:58726969-58726988 None:intergenic 25.0%
! TTATATTATTCCACTTGTAG+GGG + chr2_2:58727049-58727068 Msa0260840:intron 25.0%
!!! ATTTTTTCGAAACTAACTCT+GGG - chr2_2:58727199-58727218 None:intergenic 25.0%
! AAAATCTTGACACTATTAGA+AGG + chr2_2:58727214-58727233 Msa0260840:intron 25.0%
! ATATAAACCTGAAGTTTAAG+AGG - chr2_2:58727431-58727450 None:intergenic 25.0%
!!! CTCAATATTTTAAGTGCTAT+TGG - chr2_2:58727668-58727687 None:intergenic 25.0%
! CAATAGCACTTAAAATATTG+AGG + chr2_2:58727666-58727685 Msa0260840:intron 25.0%
! GAATAGCACTTAAAATATTG+AGG + chr2_2:58727689-58727708 Msa0260840:intron 25.0%
! ATAGCACTTAAAATATTGAG+GGG + chr2_2:58727668-58727687 Msa0260840:intron 25.0%
!! AACTTATTATTTTCCACTCT+CGG + chr2_2:58728046-58728065 Msa0260840:intron 25.0%
! TCTCGGTTTATAACAAATAA+AGG + chr2_2:58728063-58728082 Msa0260840:intron 25.0%
! CTCGGTTTATAACAAATAAA+GGG + chr2_2:58728064-58728083 Msa0260840:intron 25.0%
! TAAAGGGTTAAATATGTTTC+TGG + chr2_2:58728080-58728099 Msa0260840:intron 25.0%
!! CAAGTTTAAAACACTATGAA+AGG + chr2_2:58728262-58728281 Msa0260840:intron 25.0%
! TAAACAAATTTGAATTGAGG+AGG + chr2_2:58728488-58728507 Msa0260840:intron 25.0%
! AAACAAATTTGAATTGAGGA+GGG + chr2_2:58728489-58728508 Msa0260840:intron 25.0%
! AGTGCAGAAAAAAAAAGATT+AGG + chr2_2:58728522-58728541 Msa0260840:intron 25.0%
! GTGCAGAAAAAAAAAGATTA+GGG + chr2_2:58728523-58728542 Msa0260840:intron 25.0%
! ATGTAAGGACTAAACTTAAA+AGG + chr2_2:58728567-58728586 Msa0260840:intron 25.0%
!! TTAAAAGGTCCCAATTTTAT+AGG + chr2_2:58728582-58728601 Msa0260840:intron 25.0%
!! TAAAAGGTCCCAATTTTATA+GGG + chr2_2:58728583-58728602 Msa0260840:intron 25.0%
!!! TTTTTGGTCCCTATAAAATT+GGG - chr2_2:58728594-58728613 None:intergenic 25.0%
!!! TTGTGGGTTAAATATGTTTT+TGG - chr2_2:58728610-58728629 None:intergenic 25.0%
! GACAATTATAATGAGATATG+AGG + chr2_2:58728721-58728740 Msa0260840:intron 25.0%
!!! TAGTGGTATGTTTAATTTGT+TGG + chr2_2:58728877-58728896 Msa0260840:intron 25.0%
! TAAAGTGCATCAATTCATTT+GGG - chr2_2:58728909-58728928 None:intergenic 25.0%
! TTAAAGTGCATCAATTCATT+TGG - chr2_2:58728910-58728929 None:intergenic 25.0%
! ATTTGGTAGAAAACAAAGAA+TGG + chr2_2:58729148-58729167 Msa0260840:CDS 25.0%
! GTTGATATTGTGGAATAAAA+AGG - chr2_2:58729347-58729366 None:intergenic 25.0%
!! ATACTTTTGTAGTATTAACG+TGG + chr2_2:58730030-58730049 Msa0260840:intron 25.0%
!! TACTTTTGTAGTATTAACGT+GGG + chr2_2:58730031-58730050 Msa0260840:intron 25.0%
! TATAAGAATATCCACAACAA+TGG + chr2_2:58730517-58730536 Msa0260840:intron 25.0%
! TAAATAAGTACCTCTCATTA+TGG + chr2_2:58730567-58730586 Msa0260840:intron 25.0%
!! GTTTTGTGATTAAAATAGAG+AGG - chr2_2:58730645-58730664 None:intergenic 25.0%
!!! TCGTATACATATTTTTTGCA+TGG + chr2_2:58730789-58730808 Msa0260840:intron 25.0%
! TTTGCATGGATAATTATCTT+TGG + chr2_2:58730803-58730822 Msa0260840:intron 25.0%
! TGCCAATATTATATTTCGAT+CGG + chr2_2:58730890-58730909 Msa0260840:intron 25.0%
! ATCCGATCGAAATATAATAT+TGG - chr2_2:58730895-58730914 None:intergenic 25.0%
! TATTATATTTCGATCGGATT+TGG + chr2_2:58730896-58730915 Msa0260840:intron 25.0%
! AACTATCATTCACTTCAAAA+TGG - chr2_2:58731298-58731317 None:intergenic 25.0%
!! TTGCAATTTGTTTGCATTTA+GGG - chr2_2:58731484-58731503 None:intergenic 25.0%
!! TTTGCAATTTGTTTGCATTT+AGG - chr2_2:58731485-58731504 None:intergenic 25.0%
!! TATTTTCACTAGAATTTTGC+AGG + chr2_2:58731787-58731806 Msa0260840:intron 25.0%
! TCAATATAATAAGGTGAATG+AGG + chr2_2:58731923-58731942 Msa0260840:intron 25.0%
! CAATATAATAAGGTGAATGA+GGG + chr2_2:58731924-58731943 Msa0260840:intron 25.0%
!!! TTGAAATTTTTGGGCATTTT+TGG - chr2_2:58732011-58732030 None:intergenic 25.0%
! TTATAATGTTGGTATAGGTT+TGG + chr2_2:58726691-58726710 Msa0260840:intron 25.0%
!! AAATCATATTTGCATCGTTT+TGG + chr2_2:58732145-58732164 Msa0260840:CDS 25.0%
! CCAAAGAGTAAAATCAATAT+CGG + chr2_2:58732217-58732236 Msa0260840:CDS 25.0%
!! AAAAGTTGTTGTTCAAGTTA+AGG + chr2_2:58732294-58732313 Msa0260840:CDS 25.0%
TCTCAAATTGTGGCATATAA+AGG - chr2_2:58724634-58724653 None:intergenic 30.0%
ACCTGATTAATCTCAAATTG+TGG - chr2_2:58724644-58724663 None:intergenic 30.0%
TGTAAGAGTAATTCGATCAA+AGG + chr2_2:58724879-58724898 Msa0260840:CDS 30.0%
AAGGAAAGTAAATACACTGA+AGG + chr2_2:58724898-58724917 Msa0260840:CDS 30.0%
! AAGGAGATATCCTTTTGAAT+GGG + chr2_2:58724917-58724936 Msa0260840:CDS 30.0%
TTCCTAATTATGTCAGAAGA+GGG - chr2_2:58724973-58724992 None:intergenic 30.0%
TTTCCTAATTATGTCAGAAG+AGG - chr2_2:58724974-58724993 None:intergenic 30.0%
!!! CAGTAGTTTTTTAAGGAACA+GGG - chr2_2:58725240-58725259 None:intergenic 30.0%
TTAGGTGAAACTCATTAAAG+AGG + chr2_2:58725794-58725813 Msa0260840:intron 30.0%
! AATTACAGACTTGCTTAAAG+CGG - chr2_2:58725871-58725890 None:intergenic 30.0%
AGATATTGTTGTATAAAGGC+AGG + chr2_2:58725925-58725944 Msa0260840:intron 30.0%
GATATTGTTGTATAAAGGCA+GGG + chr2_2:58725926-58725945 Msa0260840:intron 30.0%
AATACGTTAACGTAAAACGT+TGG + chr2_2:58726058-58726077 Msa0260840:intron 30.0%
! GTAACTAAAGCAATGGTTTT+AGG - chr2_2:58726088-58726107 None:intergenic 30.0%
ACCATTGCTTTAGTTACATA+AGG + chr2_2:58726091-58726110 Msa0260840:intron 30.0%
TCCTTATGTAACTAAAGCAA+TGG - chr2_2:58726095-58726114 None:intergenic 30.0%
TGCTTTAGTTACATAAGGAT+TGG + chr2_2:58726096-58726115 Msa0260840:intron 30.0%
! TTGGTAAGTTGCTTTATACA+GGG - chr2_2:58726127-58726146 None:intergenic 30.0%
! TTTGGTAAGTTGCTTTATAC+AGG - chr2_2:58726128-58726147 None:intergenic 30.0%
AGATAAACATCAATACCATC+AGG - chr2_2:58726478-58726497 None:intergenic 30.0%
GATGTTTATCTTGACAATGT+TGG + chr2_2:58726487-58726506 Msa0260840:CDS 30.0%
TAGAAATCTTCTGAATATGG+TGG + chr2_2:58726731-58726750 Msa0260840:CDS 30.0%
AGAAATCTTCTGAATATGGT+GGG + chr2_2:58726732-58726751 Msa0260840:CDS 30.0%
! AACAACAACTTTTCCAATGT+TGG - chr2_2:58726928-58726947 None:intergenic 30.0%
! AAAAGTTGTTGTTCAAGTGA+AGG + chr2_2:58726935-58726954 Msa0260840:CDS 30.0%
TATATTATTCCACTTGTAGG+GGG + chr2_2:58727050-58727069 Msa0260840:intron 30.0%
!!! TTTTTTCGAAACTAACTCTG+GGG - chr2_2:58727198-58727217 None:intergenic 30.0%
!!! GATTTTTTCGAAACTAACTC+TGG - chr2_2:58727200-58727219 None:intergenic 30.0%
TAGCACTTAAAATATTGAGG+GGG + chr2_2:58727669-58727688 Msa0260840:intron 30.0%
CAATTTAAAAAATTGCCCCT+AGG - chr2_2:58727727-58727746 None:intergenic 30.0%
TATTCTCACGGAAACTTTAA+CGG - chr2_2:58727772-58727791 None:intergenic 30.0%
! AGACATCACATTTTATACGT+AGG + chr2_2:58727805-58727824 Msa0260840:intron 30.0%
! GACATCACATTTTATACGTA+GGG + chr2_2:58727806-58727825 Msa0260840:intron 30.0%
!! TATTTGTTATAAACCGAGAG+TGG - chr2_2:58728062-58728081 None:intergenic 30.0%
!!! GTTTTTGGTCCCTATAAAAT+TGG - chr2_2:58728595-58728614 None:intergenic 30.0%
! ACAAGTGATATTTTCTTGTG+TGG - chr2_2:58728777-58728796 None:intergenic 30.0%
ATTAAACATACCACTAACCT+TGG - chr2_2:58728873-58728892 None:intergenic 30.0%
AACCACACTAATCATCATTT+GGG - chr2_2:58728987-58729006 None:intergenic 30.0%
AAACCACACTAATCATCATT+TGG - chr2_2:58728988-58729007 None:intergenic 30.0%
ATGATGATTAGTGTGGTTTA+AGG + chr2_2:58728989-58729008 Msa0260840:intron 30.0%
!! GTAGCAAAGTATTGTGTAAA+AGG - chr2_2:58729035-58729054 None:intergenic 30.0%
AAGGCTTGTCTATGATATAT+AGG - chr2_2:58729074-58729093 None:intergenic 30.0%
TCCACAATATCAACTTAATC+AGG + chr2_2:58729353-58729372 Msa0260840:CDS 30.0%
!! ACCTGATTAAGTTGATATTG+TGG - chr2_2:58729357-58729376 None:intergenic 30.0%
TTACAACATTTGCAGTTGTA+AGG + chr2_2:58729606-58729625 Msa0260840:CDS 30.0%
TACAACATTTGCAGTTGTAA+GGG + chr2_2:58729607-58729626 Msa0260840:CDS 30.0%
AAGGATAGTAAATACAGTGA+GGG + chr2_2:58729641-58729660 Msa0260840:CDS 30.0%
! GATATCCTTTTGAATGGATA+TGG + chr2_2:58729665-58729684 Msa0260840:CDS 30.0%
AGAAAAATTGATCCTGCTAA+TGG + chr2_2:58729731-58729750 Msa0260840:CDS 30.0%
GAAAAATTGATCCTGCTAAT+GGG + chr2_2:58729732-58729751 Msa0260840:CDS 30.0%
TCAAATTATCTCGGTTCTTT+AGG + chr2_2:58729764-58729783 Msa0260840:CDS 30.0%
!! TAAATAATTTCAGGAGTACC+TGG + chr2_2:58730200-58730219 Msa0260840:intron 30.0%
!! AAATAATTTCAGGAGTACCT+GGG + chr2_2:58730201-58730220 Msa0260840:intron 30.0%
CATTATGGAGAGAAAACATT+TGG + chr2_2:58730582-58730601 Msa0260840:intron 30.0%
! AAGCTCATCAAAGAGAATTT+TGG + chr2_2:58731005-58731024 Msa0260840:CDS 30.0%
! GAGAATTTTGGATATGATGA+TGG + chr2_2:58731017-58731036 Msa0260840:CDS 30.0%
TAAAAAAAAATTGGTGGGGT+GGG + chr2_2:58731184-58731203 Msa0260840:intron 30.0%
AACTATGGTCATTTACTCAA+TGG - chr2_2:58731326-58731345 None:intergenic 30.0%
! GTTGTTTAAGATTGCTCTTT+AGG - chr2_2:58731371-58731390 None:intergenic 30.0%
ATTTCTAATGCCTTCTCTTT+CGG - chr2_2:58726718-58726737 None:intergenic 30.0%
CATTAGAAATCTTCTGAACA+TGG + chr2_2:58732087-58732106 Msa0260840:CDS 30.0%
! TGGAGATTTTGTCAAAGATA+TGG + chr2_2:58732165-58732184 Msa0260840:CDS 30.0%
ATGGAAAAATACTTGCAAGA+AGG + chr2_2:58732184-58732203 Msa0260840:CDS 30.0%
!!! CCGATATTGATTTTACTCTT+TGG - chr2_2:58732220-58732239 None:intergenic 30.0%
! TATCGGAATTGAGAACTTTT+TGG + chr2_2:58732234-58732253 Msa0260840:CDS 30.0%
!!! GTTTTCTCTAGTTCTAACAT+TGG + chr2_2:58732271-58732290 Msa0260840:CDS 30.0%
ATTTGGTAGAAAGCAGAGAA+TGG + chr2_2:58724435-58724454 Msa0260840:CDS 35.0%
TTAGCTGAATATTGTCCTGA+AGG + chr2_2:58724461-58724480 Msa0260840:CDS 35.0%
! AGTTTAAGATGATCTGAGGT+TGG - chr2_2:58724491-58724510 None:intergenic 35.0%
! GTTATCTGGGATTGAATCAT+TGG - chr2_2:58724537-58724556 None:intergenic 35.0%
! GCCACAATTTGAGATTAATC+AGG + chr2_2:58724640-58724659 Msa0260840:intron 35.0%
! GAAGGAGATATCCTTTTGAA+TGG + chr2_2:58724916-58724935 Msa0260840:CDS 35.0%
! GATATCCTTTTGAATGGGAA+TGG + chr2_2:58724922-58724941 Msa0260840:CDS 35.0%
TACCCTCTTCTGACATAATT+AGG + chr2_2:58724968-58724987 Msa0260840:CDS 35.0%
AGGAAAATTGATCCTGCTAA+TGG + chr2_2:58724988-58725007 Msa0260840:CDS 35.0%
GGAAAATTGATCCTGCTAAT+GGG + chr2_2:58724989-58725008 Msa0260840:CDS 35.0%
ATTTCACTGTCGGATTATCT+TGG + chr2_2:58725012-58725031 Msa0260840:CDS 35.0%
TCGGATTATCTTGGTACTTT+AGG + chr2_2:58725021-58725040 Msa0260840:intron 35.0%
!!! GCAGTAGTTTTTTAAGGAAC+AGG - chr2_2:58725241-58725260 None:intergenic 35.0%
AGTACTTATAAACAGGACCA+GGG - chr2_2:58725263-58725282 None:intergenic 35.0%
AAGTACTTATAAACAGGACC+AGG - chr2_2:58725264-58725283 None:intergenic 35.0%
!! ATACAAAAGTGCTTATGCTC+AGG - chr2_2:58725340-58725359 None:intergenic 35.0%
CTCTAGTAACAATGAGATTG+AGG - chr2_2:58725978-58725997 None:intergenic 35.0%
CTCAATCTCATTGTTACTAG+AGG + chr2_2:58725976-58725995 Msa0260840:intron 35.0%
!!! TGTTGTTTTTGGCCTAAACT+CGG + chr2_2:58726025-58726044 Msa0260840:intron 35.0%
! CCATGAATTCGCATGATTTT+TGG - chr2_2:58726246-58726265 None:intergenic 35.0%
CCAAAAATCATGCGAATTCA+TGG + chr2_2:58726243-58726262 Msa0260840:intron 35.0%
! TTTTGCAGGTATTTTCCTGA+TGG + chr2_2:58726460-58726479 Msa0260840:intron 35.0%
GTTTATCTTGACAATGTTGG+TGG + chr2_2:58726490-58726509 Msa0260840:CDS 35.0%
TGAGATATCATTCCACAAAG+AGG - chr2_2:58726565-58726584 None:intergenic 35.0%
TCAATATAATCAGGTGAGCA+CGG + chr2_2:58726582-58726601 Msa0260840:intron 35.0%
! GAATCATATTGGGATCGTTT+TGG + chr2_2:58726786-58726805 Msa0260840:CDS 35.0%
! TGGAGATTTTGCCAAAGATA+TGG + chr2_2:58726806-58726825 Msa0260840:CDS 35.0%
! TATCGGAATTGAGTGCTTTT+TGG + chr2_2:58726875-58726894 Msa0260840:CDS 35.0%
AATGTTGGAGCTAGAGAATA+AGG - chr2_2:58726913-58726932 None:intergenic 35.0%
! TTATTCTCTAGCTCCAACAT+TGG + chr2_2:58726912-58726931 Msa0260840:CDS 35.0%
ATTTCCCCTGATCTCAATTT+CGG - chr2_2:58727117-58727136 None:intergenic 35.0%
! TATCCCTCTTGTCTATTTCT+TGG + chr2_2:58727256-58727275 Msa0260840:intron 35.0%
ACCACTAAATTTACCATGAC+AGG + chr2_2:58727288-58727307 Msa0260840:intron 35.0%
TCCTGTCATGGTAAATTTAG+TGG - chr2_2:58727292-58727311 None:intergenic 35.0%
GGAAAATGCAATAGCTAACT+TGG - chr2_2:58727319-58727338 None:intergenic 35.0%
CAAAACTTCAAAACAGGGTT+AGG - chr2_2:58727340-58727359 None:intergenic 35.0%
!!! CTAACCCTGTTTTGAAGTTT+TGG + chr2_2:58727338-58727357 Msa0260840:intron 35.0%
CATGCCAAAACTTCAAAACA+GGG - chr2_2:58727345-58727364 None:intergenic 35.0%
TCATGCCAAAACTTCAAAAC+AGG - chr2_2:58727346-58727365 None:intergenic 35.0%
ACTAGAATAGAGTCGTGAAT+CGG + chr2_2:58727557-58727576 Msa0260840:intron 35.0%
CCTACTAGAAACATAGAGTT+TGG - chr2_2:58727623-58727642 None:intergenic 35.0%
!! CCAAACTCTATGTTTCTAGT+AGG + chr2_2:58727620-58727639 Msa0260840:intron 35.0%
GTAGGTTCATCTAATGAAAC+AGG + chr2_2:58727638-58727657 Msa0260840:intron 35.0%
AAAAAATTGCCCCTAGGTAA+TGG - chr2_2:58727721-58727740 None:intergenic 35.0%
! TCACATTTTATACGTAGGGT+CGG + chr2_2:58727810-58727829 Msa0260840:intron 35.0%
! ATTGAGAGTGACACTCTTTT+TGG - chr2_2:58727973-58727992 None:intergenic 35.0%
AAGTTGAGTGTGATGATCAT+AGG - chr2_2:58728031-58728050 None:intergenic 35.0%
!!! TTGCGACAATTTTTTTGCAG+AGG + chr2_2:58728397-58728416 Msa0260840:intron 35.0%
AACAAACATACCACTAACCT+TGG - chr2_2:58728956-58728975 None:intergenic 35.0%
AAGGTTAGTGGTATGTTTGT+TGG + chr2_2:58728955-58728974 Msa0260840:intron 35.0%
ATGTTTGAGTGTCTGCAATT+GGG - chr2_2:58729098-58729117 None:intergenic 35.0%
AATGTTTGAGTGTCTGCAAT+TGG - chr2_2:58729099-58729118 None:intergenic 35.0%
TGGAATAAAAAGGCCTTCAA+GGG - chr2_2:58729337-58729356 None:intergenic 35.0%
CTCACTGTATTTACTATCCT+TGG - chr2_2:58729642-58729661 None:intergenic 35.0%
CAAGGATAGTAAATACAGTG+AGG + chr2_2:58729640-58729659 Msa0260840:CDS 35.0%
AGGATAGTAAATACAGTGAG+GGG + chr2_2:58729642-58729661 Msa0260840:CDS 35.0%
AAGAATATCCACAACAATGG+TGG + chr2_2:58730520-58730539 Msa0260840:intron 35.0%
AGAATATCCACAACAATGGT+GGG + chr2_2:58730521-58730540 Msa0260840:intron 35.0%
! TGTTTTCTCTCCATAATGAG+AGG - chr2_2:58730580-58730599 None:intergenic 35.0%
CTTACAACTTGAAACATACC+TGG + chr2_2:58730967-58730986 Msa0260840:intron 35.0%
! GAATTACGACTTGCTTAAAG+CGG - chr2_2:58731075-58731094 None:intergenic 35.0%
CTAAAAAAAAATTGGTGGGG+TGG + chr2_2:58731183-58731202 Msa0260840:intron 35.0%
AAAAAAAAATTGGTGGGGTG+GGG + chr2_2:58731185-58731204 Msa0260840:intron 35.0%
TAGTTCATCCAAATTGACAC+CGG + chr2_2:58731215-58731234 Msa0260840:intron 35.0%
CAATTGCACACAAACAACTA+TGG - chr2_2:58731341-58731360 None:intergenic 35.0%
! TAGTCACTTTAGTCCTTGAA+TGG + chr2_2:58731437-58731456 Msa0260840:intron 35.0%
! AGTCACTTTAGTCCTTGAAT+GGG + chr2_2:58731438-58731457 Msa0260840:intron 35.0%
ATCAACAGAGTCTACATTCA+TGG - chr2_2:58731513-58731532 None:intergenic 35.0%
AGACTCTGTTGATCAATTTC+AGG + chr2_2:58731520-58731539 Msa0260840:intron 35.0%
GACTCTGTTGATCAATTTCA+GGG + chr2_2:58731521-58731540 Msa0260840:intron 35.0%
ACTAACAGAGTCTACATTCA+GGG + chr2_2:58731585-58731604 Msa0260840:intron 35.0%
GGTAAACATCAATACCATCA+GGG - chr2_2:58731818-58731837 None:intergenic 35.0%
AGGTAAACATCAATACCATC+AGG - chr2_2:58731819-58731838 None:intergenic 35.0%
GATGTTTACCTTGACAATGT+TGG + chr2_2:58731828-58731847 Msa0260840:CDS 35.0%
! TTTTACCACCAACATTGTCA+AGG - chr2_2:58726498-58726517 None:intergenic 35.0%
TTCTAGCATTCTTGTTGACA+TGG - chr2_2:58731881-58731900 None:intergenic 35.0%
AATGCTAGAATACCACTTTG+TGG + chr2_2:58731891-58731910 Msa0260840:CDS 35.0%
ATGCTAGAATACCACTTTGT+GGG + chr2_2:58731892-58731911 Msa0260840:CDS 35.0%
TAGAAATCTTCTGAACATGG+TGG + chr2_2:58732090-58732109 Msa0260840:CDS 35.0%
AGAAATCTTCTGAACATGGT+GGG + chr2_2:58732091-58732110 Msa0260840:CDS 35.0%
CCTCAGATCATCTTAAACTC+CGG + chr2_2:58724492-58724511 Msa0260840:CDS 40.0%
ATTGGCAAGAGAAAGAGAGA+CGG - chr2_2:58724519-58724538 None:intergenic 40.0%
TCTGCGAAGATAAGGATCAA+CGG - chr2_2:58724588-58724607 None:intergenic 40.0%
GTGATTGTTCTGCGAAGATA+AGG - chr2_2:58724596-58724615 None:intergenic 40.0%
TATCTTCGCAGAACAATCAC+CGG + chr2_2:58724596-58724615 Msa0260840:intron 40.0%
TGGCATATAAAGGCCATCAA+TGG - chr2_2:58724624-58724643 None:intergenic 40.0%
CGTAACCATTCCCATTCAAA+AGG - chr2_2:58724930-58724949 None:intergenic 40.0%
TGCTAATGGGATTTCACTGT+CGG + chr2_2:58725002-58725021 Msa0260840:CDS 40.0%
TCCTTAAAAAACTACTGCCC+TGG + chr2_2:58725243-58725262 Msa0260840:intron 40.0%
!!! ACCAGGGCAGTAGTTTTTTA+AGG - chr2_2:58725247-58725266 None:intergenic 40.0%
!! AAAAGTGCTTATGCTCAGGA+CGG - chr2_2:58725336-58725355 None:intergenic 40.0%
TTGAACAATTGCAGGAGTAG+CGG + chr2_2:58725517-58725536 Msa0260840:intron 40.0%
GTAATAGGAGATCCAAAACC+AGG + chr2_2:58725566-58725585 Msa0260840:CDS 40.0%
! AACACATGTGATCCTGGTTT+TGG - chr2_2:58725581-58725600 None:intergenic 40.0%
GATATGAACACATGTGATCC+TGG - chr2_2:58725587-58725606 None:intergenic 40.0%
GAGGAATTAGGATATGACGA+CGG + chr2_2:58725813-58725832 Msa0260840:CDS 40.0%
CGACGGTTTCAATTACAATG+CGG + chr2_2:58725830-58725849 Msa0260840:CDS 40.0%
!!! GTTGTTTTTGGCCTAAACTC+GGG + chr2_2:58726026-58726045 Msa0260840:intron 40.0%
! TAAGTTGCTTTATACAGGGC+AGG - chr2_2:58726123-58726142 None:intergenic 40.0%
ATGCGAATTCATGGAGATCA+TGG + chr2_2:58726252-58726271 Msa0260840:intron 40.0%
! TTCTAGCATGCTTGTTGACA+TGG - chr2_2:58726540-58726559 None:intergenic 40.0%
CATGCTAGAATACCTCTTTG+TGG + chr2_2:58726550-58726569 Msa0260840:CDS 40.0%
TAGGTTTGGACTGAAAGAGA+AGG + chr2_2:58726705-58726724 Msa0260840:intron 40.0%
! TCTTCTGAATATGGTGGGAA+AGG + chr2_2:58726737-58726756 Msa0260840:CDS 40.0%
! ATATGGTGGGAAAGGAAGTA+AGG + chr2_2:58726745-58726764 Msa0260840:CDS 40.0%
CCACCAAGAAATAGACAAGA+GGG - chr2_2:58727262-58727281 None:intergenic 40.0%
ACCTGAAGTTTAAGAGGTAG+CGG - chr2_2:58727425-58727444 None:intergenic 40.0%
GAAGAGCTTGCATTTCATGT+TGG - chr2_2:58727530-58727549 None:intergenic 40.0%
CGACTCTATTCTAGTAGAGA+GGG - chr2_2:58727552-58727571 None:intergenic 40.0%
ACGACTCTATTCTAGTAGAG+AGG - chr2_2:58727553-58727572 None:intergenic 40.0%
AAGTTTCCGTGAGAATACCT+TGG + chr2_2:58727775-58727794 Msa0260840:intron 40.0%
! CATCAACCAAGGTATTCTCA+CGG - chr2_2:58727784-58727803 None:intergenic 40.0%
GACCCAAATGATGATTAGTG+TGG + chr2_2:58728982-58729001 Msa0260840:intron 40.0%
ATTGCACATTGCATCCGAAT+TGG + chr2_2:58729116-58729135 Msa0260840:CDS 40.0%
ATTGCATCCGAATTGGACAT+GGG + chr2_2:58729123-58729142 Msa0260840:CDS 40.0%
CAAATCTCCCATGTCCAATT+CGG - chr2_2:58729133-58729152 None:intergenic 40.0%
! AGTTTAAGATGATCCGAGGT+TGG - chr2_2:58729204-58729223 None:intergenic 40.0%
CAAGAGAAAGAGAAACAGTG+CGG - chr2_2:58729227-58729246 None:intergenic 40.0%
GTCTTCAGGGATTGAATCAT+CGG - chr2_2:58729250-58729269 None:intergenic 40.0%
GTGGAATAAAAAGGCCTTCA+AGG - chr2_2:58729338-58729357 None:intergenic 40.0%
TGTAAGGGTAATTCGATCCA+AGG + chr2_2:58729622-58729641 Msa0260840:CDS 40.0%
GGATAGTAAATACAGTGAGG+GGG + chr2_2:58729643-58729662 Msa0260840:CDS 40.0%
CGAGACCATATCCATTCAAA+AGG - chr2_2:58729673-58729692 None:intergenic 40.0%
GATAGTGAAATCCCATTAGC+AGG - chr2_2:58729746-58729765 None:intergenic 40.0%
!! TGGTTAGGAATAGAGGTACT+AGG + chr2_2:58730233-58730252 Msa0260840:CDS 40.0%
GATATGAACACATTGGATCC+TGG - chr2_2:58730269-58730288 None:intergenic 40.0%
AGCAGCAGATATGAACACAT+TGG - chr2_2:58730276-58730295 None:intergenic 40.0%
TTGCTAAGATACGAGGATGT+AGG + chr2_2:58730327-58730346 Msa0260840:CDS 40.0%
TGCTAAGATACGAGGATGTA+GGG + chr2_2:58730328-58730347 Msa0260840:CDS 40.0%
CAACTTGAAACATACCTGGT+TGG + chr2_2:58730971-58730990 Msa0260840:intron 40.0%
!! ACATACCTGGTTGGTTTATC+AGG + chr2_2:58730980-58730999 Msa0260840:intron 40.0%
AAAAAAAATTGGTGGGGTGG+GGG + chr2_2:58731186-58731205 Msa0260840:intron 40.0%
! AGTTCTTTCCGGTGTCAATT+TGG - chr2_2:58731226-58731245 None:intergenic 40.0%
GTTGTTTGTGTGCAATTGCT+AGG + chr2_2:58731343-58731362 Msa0260840:intron 40.0%
GACTACTCATTTCCCATTCA+AGG - chr2_2:58731453-58731472 None:intergenic 40.0%
TCAGGGACTAAAGTGACTAA+AGG + chr2_2:58731538-58731557 Msa0260840:intron 40.0%
CAGGGACTAAAGTGACTAAA+GGG + chr2_2:58731539-58731558 Msa0260840:intron 40.0%
AGGGACTAAAGTGACTAAAG+GGG + chr2_2:58731540-58731559 Msa0260840:intron 40.0%
ACTAAAGGGGTCTACATTCA+GGG + chr2_2:58731553-58731572 Msa0260840:intron 40.0%
GACTAACAGAGTCTACATTC+AGG + chr2_2:58731584-58731603 Msa0260840:intron 40.0%
TGACGACTCATTTCCTATTC+AGG + chr2_2:58731644-58731663 Msa0260840:intron 40.0%
GACGACTCATTTCCTATTCA+GGG + chr2_2:58731645-58731664 Msa0260840:intron 40.0%
! AGTCACTTTAGTCCCTGAAT+AGG - chr2_2:58731660-58731679 None:intergenic 40.0%
! TTTTGCAGGTATTTCCCTGA+TGG + chr2_2:58731801-58731820 Msa0260840:intron 40.0%
GTTTACCTTGACAATGTTGG+TGG + chr2_2:58731831-58731850 Msa0260840:CDS 40.0%
TGAGATATCATCCCACAAAG+TGG - chr2_2:58731906-58731925 None:intergenic 40.0%
! CCGGAGTTTAAGATGATCTG+AGG - chr2_2:58724495-58724514 None:intergenic 45.0%
CAACGGCTAGATGGTTATCT+GGG - chr2_2:58724550-58724569 None:intergenic 45.0%
TCAACGGCTAGATGGTTATC+TGG - chr2_2:58724551-58724570 None:intergenic 45.0%
GGAGAGAAGGAGAGTTTCAA+CGG - chr2_2:58724567-58724586 None:intergenic 45.0%
GATAAGGATCAACGGAGAGA+AGG - chr2_2:58724580-58724599 None:intergenic 45.0%
ATAAAGGCCATCAATGGTGC+CGG - chr2_2:58724618-58724637 None:intergenic 45.0%
GACAGTGAAATCCCATTAGC+AGG - chr2_2:58725003-58725022 None:intergenic 45.0%
GGAACAGGGACATTAAGTCT+AGG - chr2_2:58725226-58725245 None:intergenic 45.0%
TGAACAATTGCAGGAGTAGC+GGG + chr2_2:58725518-58725537 Msa0260840:intron 45.0%
TGGCTGGGAATAGAGGTAAT+AGG + chr2_2:58725551-58725570 Msa0260840:CDS 45.0%
GTGTTCATATCTGCTGCATC+TGG + chr2_2:58725596-58725615 Msa0260840:CDS 45.0%
GGTTACACATCACTTCGTGA+TGG - chr2_2:58726203-58726222 None:intergenic 45.0%
GGAAAGGAAGTAAGGATGGA+GGG + chr2_2:58726753-58726772 Msa0260840:CDS 45.0%
TTAAATGAGCCCCCTACAAG+TGG - chr2_2:58727062-58727081 None:intergenic 45.0%
AGCTAGAGCAAAGCTCTGTA+TGG + chr2_2:58727082-58727101 Msa0260840:intron 45.0%
ATTGAACCTGAGACCTTGAG+AGG + chr2_2:58727135-58727154 Msa0260840:intron 45.0%
!! TAGTGGTTGGCTTAGGATCT+TGG - chr2_2:58727169-58727188 None:intergenic 45.0%
AAGATCCTAAGCCAACCACT+AGG + chr2_2:58727168-58727187 Msa0260840:intron 45.0%
! CCCTCTTGTCTATTTCTTGG+TGG + chr2_2:58727259-58727278 Msa0260840:intron 45.0%
GCCACCAAGAAATAGACAAG+AGG - chr2_2:58727263-58727282 None:intergenic 45.0%
TAACTTGGACGTTCCTGTCA+TGG - chr2_2:58727304-58727323 None:intergenic 45.0%
CGTGAGAATACCTTGGTTGA+TGG + chr2_2:58727782-58727801 Msa0260840:intron 45.0%
TGTGATGTCTCCATCAACCA+AGG - chr2_2:58727795-58727814 None:intergenic 45.0%
ACATACCACTAACCTTGGTC+TGG - chr2_2:58728868-58728887 None:intergenic 45.0%
ACCTTGGTCTGGTGAAATGA+TGG - chr2_2:58728940-58728959 None:intergenic 45.0%
TTTCACCAGACCAAGGTTAG+TGG + chr2_2:58728943-58728962 Msa0260840:intron 45.0%
ACATACCACTAACCTTGGTC+TGG - chr2_2:58728868-58728887 None:intergenic 45.0%
CATTGCATCCGAATTGGACA+TGG + chr2_2:58729122-58729141 Msa0260840:CDS 45.0%
CGAATTGGACATGGGAGATT+TGG + chr2_2:58729131-58729150 Msa0260840:CDS 45.0%
GGAGAGAAGGAGAGTTTCAA+CGG - chr2_2:58724567-58724586 None:intergenic 45.0%
GATATGGATCAACGGAGAGA+AGG - chr2_2:58729293-58729312 None:intergenic 45.0%
TCCGTTGATCCATATCTTCG+CGG + chr2_2:58729297-58729316 Msa0260840:CDS 45.0%
TCCGCGAAGATATGGATCAA+CGG - chr2_2:58729301-58729320 None:intergenic 45.0%
GTGATTGTTCCGCGAAGATA+TGG - chr2_2:58729309-58729328 None:intergenic 45.0%
TATCTTCGCGGAACAATCAC+CGG + chr2_2:58729309-58729328 Msa0260840:CDS 45.0%
! GAGGGGGATATCCTTTTGAA+TGG + chr2_2:58729659-58729678 Msa0260840:CDS 45.0%
! ACACATTGGATCCTGGCTTT+GGG - chr2_2:58730262-58730281 None:intergenic 45.0%
AACACATTGGATCCTGGCTT+TGG - chr2_2:58730263-58730282 None:intergenic 45.0%
! GTGTTCATATCTGCTGCTTC+TGG + chr2_2:58730278-58730297 Msa0260840:CDS 45.0%
ATACGAGGATGTAGGGTCAT+TGG + chr2_2:58730335-58730354 Msa0260840:CDS 45.0%
CTTCACCTGATAAACCAACC+AGG - chr2_2:58730988-58731007 None:intergenic 45.0%
GACTAAAGGGGTCTACATTC+AGG + chr2_2:58731552-58731571 Msa0260840:intron 45.0%
TAGGTTTGGACCGAAAGAGA+AGG + chr2_2:58732064-58732083 Msa0260840:intron 45.0%
! TCTTCTGAACATGGTGGGAA+AGG + chr2_2:58732096-58732115 Msa0260840:CDS 45.0%
!!! TAAATATGAATTTTTTAAAA+CGG + chr2_2:58728326-58728345 Msa0260840:intron 5.0%
!!! ATAATTTTTATCAATAAAAT+CGG - chr2_2:58729798-58729817 None:intergenic 5.0%
!!! TTTTATTCAATTATTTTAAA+AGG + chr2_2:58729833-58729852 Msa0260840:intron 5.0%
!!! TAAATTATTTGTTTTTATTT+GGG - chr2_2:58730105-58730124 None:intergenic 5.0%
!!! TTAAATTATTTGTTTTTATT+TGG - chr2_2:58730106-58730125 None:intergenic 5.0%
!! AATATTAATTAAATAATTTC+AGG + chr2_2:58730191-58730210 Msa0260840:intron 5.0%
!!! TATAAAAAAAATGAATTTTT+CGG + chr2_2:58730765-58730784 Msa0260840:intron 5.0%
!!! TAATATTTTCAAATTATTTA+CGG + chr2_2:58730924-58730943 Msa0260840:intron 5.0%
! TCTGAGGTTGGAACACCTTC+AGG - chr2_2:58724479-58724498 None:intergenic 50.0%
CAAGAGAAAGAGAGACGGTC+CGG - chr2_2:58724514-58724533 None:intergenic 50.0%
GGAGAGTTTCAACGGCTAGA+TGG - chr2_2:58724559-58724578 None:intergenic 50.0%
ACAATCACCGGCACCATTGA+TGG + chr2_2:58724608-58724627 Msa0260840:intron 50.0%
GAACAATTGCAGGAGTAGCG+GGG + chr2_2:58725519-58725538 Msa0260840:intron 50.0%
!! GCCAACTTGCTAAGATCCGA+GGG + chr2_2:58725639-58725658 Msa0260840:CDS 50.0%
ACCCTCGGATCTTAGCAAGT+TGG - chr2_2:58725643-58725662 None:intergenic 50.0%
! TTGCTAAGATCCGAGGGTGT+CGG + chr2_2:58725645-58725664 Msa0260840:CDS 50.0%
TGTCACGAATGCACAGCGAA+GGG - chr2_2:58726308-58726327 None:intergenic 50.0%
TTGTCACGAATGCACAGCGA+AGG - chr2_2:58726309-58726328 None:intergenic 50.0%
GGTGGGAAAGGAAGTAAGGA+TGG + chr2_2:58726749-58726768 Msa0260840:CDS 50.0%
GGGAAAGGAAGTAAGGATGG+AGG + chr2_2:58726752-58726771 Msa0260840:CDS 50.0%
TGCCCACCGAAATTGAGATC+AGG + chr2_2:58727108-58727127 Msa0260840:intron 50.0%
GCCCACCGAAATTGAGATCA+GGG + chr2_2:58727109-58727128 Msa0260840:intron 50.0%
CCCCTGATCTCAATTTCGGT+GGG - chr2_2:58727113-58727132 None:intergenic 50.0%
CCCACCGAAATTGAGATCAG+GGG + chr2_2:58727110-58727129 Msa0260840:intron 50.0%
TCCCCTGATCTCAATTTCGG+TGG - chr2_2:58727114-58727133 None:intergenic 50.0%
TTTGCTCCTCTCAAGGTCTC+AGG - chr2_2:58727144-58727163 None:intergenic 50.0%
! CTTGGAGTTTGCTCCTCTCA+AGG - chr2_2:58727151-58727170 None:intergenic 50.0%
!! GTTGACCTAGTGGTTGGCTT+AGG - chr2_2:58727176-58727195 None:intergenic 50.0%
!! TAACTCTGGGGTTGACCTAG+TGG - chr2_2:58727186-58727205 None:intergenic 50.0%
GCCGCTACCTCTTAAACTTC+AGG + chr2_2:58727421-58727440 Msa0260840:intron 50.0%
ATACAGGAGTCACCAGACCA+AGG + chr2_2:58728853-58728872 Msa0260840:intron 50.0%
AGTCACCAGACCAAGGTTAG+TGG + chr2_2:58728860-58728879 Msa0260840:intron 50.0%
GCCATCATTTCACCAGACCA+AGG + chr2_2:58728936-58728955 Msa0260840:intron 50.0%
TGAGTGTCTGCAATTGGGCA+AGG - chr2_2:58729093-58729112 None:intergenic 50.0%
GTAGCTGCATACTGTCCTGA+AGG + chr2_2:58729174-58729193 Msa0260840:CDS 50.0%
!! TCCTGAAGGTGTTCCAACCT+CGG + chr2_2:58724475-58724494 Msa0260840:CDS 50.0%
! GCGGAGTTTAAGATGATCCG+AGG - chr2_2:58729208-58729227 None:intergenic 50.0%
CAACGGCTAGATGGTCTTCA+GGG - chr2_2:58729263-58729282 None:intergenic 50.0%
TCAACGGCTAGATGGTCTTC+AGG - chr2_2:58729264-58729283 None:intergenic 50.0%
GGAGAGTTTCAACGGCTAGA+TGG - chr2_2:58724559-58724578 None:intergenic 50.0%
! AAAAAGGCCTTCAAGGGTGC+CGG - chr2_2:58729331-58729350 None:intergenic 50.0%
CGCAGCATGGTTAGGAATAG+AGG + chr2_2:58730226-58730245 Msa0260840:CDS 50.0%
!! GGTGCTGTTGGTATGAATGC+TGG + chr2_2:58730299-58730318 Msa0260840:CDS 50.0%
!! GGTCAGCTTGCTAAGATACG+AGG + chr2_2:58730320-58730339 Msa0260840:CDS 50.0%
! TGAAGCACCCACCATTGTTG+TGG - chr2_2:58730531-58730550 None:intergenic 50.0%
! TCTGAACATGGTGGGAAAGG+AGG + chr2_2:58732099-58732118 Msa0260840:CDS 50.0%
GGTGAGGATGGAAGGCTATA+TGG + chr2_2:58732120-58732139 Msa0260840:CDS 50.0%
TGCAGCATGGCTGGGAATAG+AGG + chr2_2:58725544-58725563 Msa0260840:CDS 55.0%
!! TCTGCTGCATCTGGTGCTGT+TGG + chr2_2:58725605-58725624 Msa0260840:CDS 55.0%
!! GGTGCTGTTGGTATGAGTGC+TGG + chr2_2:58725617-58725636 Msa0260840:CDS 55.0%
!! GGCCAACTTGCTAAGATCCG+AGG + chr2_2:58725638-58725657 Msa0260840:CDS 55.0%
!! TGCTAAGATCCGAGGGTGTC+GGG + chr2_2:58725646-58725665 Msa0260840:CDS 55.0%
AAGCACGGGCTCCGATGATA+AGG + chr2_2:58725676-58725695 Msa0260840:CDS 55.0%
TATAAAGGCAGGGCCGCACT+TGG + chr2_2:58725936-58725955 Msa0260840:intron 55.0%
ATAAAGGCAGGGCCGCACTT+GGG + chr2_2:58725937-58725956 Msa0260840:intron 55.0%
! TCTGGGGTTGACCTAGTGGT+TGG - chr2_2:58727182-58727201 None:intergenic 55.0%
TGAGGGGGTGACCATTACCT+AGG + chr2_2:58727707-58727726 Msa0260840:intron 55.0%
GAGGGGGTGACCATTACCTA+GGG + chr2_2:58727708-58727727 Msa0260840:intron 55.0%
AGGGGGTGACCATTACCTAG+GGG + chr2_2:58727709-58727728 Msa0260840:intron 55.0%
TCCGAGGTTGGAACACCTTC+AGG - chr2_2:58729192-58729211 None:intergenic 55.0%
ACAATCACCGGCACCCTTGA+AGG + chr2_2:58729321-58729340 Msa0260840:CDS 55.0%
GTACTAGGAGACCCAAAGCC+AGG + chr2_2:58730248-58730267 Msa0260840:CDS 55.0%
!! TCTGCTGCTTCTGGTGCTGT+TGG + chr2_2:58730287-58730306 Msa0260840:CDS 55.0%
TGTAGGGTCATTGGCAGCAC+TGG + chr2_2:58730344-58730363 Msa0260840:CDS 55.0%
!! CAGCACTGGCTCTGATGAGA+AGG + chr2_2:58730358-58730377 Msa0260840:CDS 55.0%
AAAAATTGGTGGGGTGGGGG+TGG + chr2_2:58731189-58731208 Msa0260840:intron 55.0%
AAAATTGGTGGGGTGGGGGT+GGG + chr2_2:58731190-58731209 Msa0260840:intron 55.0%
! ACATGGTGGGAAAGGAGGTG+AGG + chr2_2:58732104-58732123 Msa0260840:CDS 55.0%
GGAAAGGAGGTGAGGATGGA+AGG + chr2_2:58732112-58732131 Msa0260840:CDS 55.0%
! GAGTAGCGGGGTTTGCAGCA+TGG + chr2_2:58725531-58725550 Msa0260840:CDS 60.0%
!! ATCCGAGGGTGTCGGGTCAT+CGG + chr2_2:58725653-58725672 Msa0260840:CDS 60.0%
TTCCGATGACCCGACACCCT+CGG - chr2_2:58725658-58725677 None:intergenic 60.0%
GTGTCGGGTCATCGGAAGCA+CGG + chr2_2:58725661-58725680 Msa0260840:CDS 60.0%
! TGTCGGGTCATCGGAAGCAC+GGG + chr2_2:58725662-58725681 Msa0260840:CDS 60.0%
GATTGAGGTGTGCCGTGTGC+CGG - chr2_2:58725963-58725982 None:intergenic 60.0%
GAGTACCTGGGTTCGCAGCA+TGG + chr2_2:58730213-58730232 Msa0260840:CDS 60.0%
CCTAACCATGCTGCGAACCC+AGG - chr2_2:58730221-58730240 None:intergenic 60.0%
CCTGGGTTCGCAGCATGGTT+AGG + chr2_2:58730218-58730237 Msa0260840:CDS 60.0%
AAATTGGTGGGGTGGGGGTG+GGG + chr2_2:58731191-58731210 Msa0260840:intron 60.0%
GGTGGGAAAGGAGGTGAGGA+TGG + chr2_2:58732108-58732127 Msa0260840:CDS 60.0%
AGCGGGGTTTGCAGCATGGC+TGG + chr2_2:58725535-58725554 Msa0260840:CDS 65.0%
GCGGGGTTTGCAGCATGGCT+GGG + chr2_2:58725536-58725555 Msa0260840:CDS 65.0%
AATTGGTGGGGTGGGGGTGG+GGG + chr2_2:58731192-58731211 Msa0260840:intron 65.0%
AGGCAGGGCCGCACTTGGGC+CGG + chr2_2:58725941-58725960 Msa0260840:intron 75.0%
GCCGCACTTGGGCCGGCACA+CGG + chr2_2:58725948-58725967 Msa0260840:intron 75.0%
! GCCGTGTGCCGGCCCAAGTG+CGG - chr2_2:58725952-58725971 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 58724428 58732321 58724428 ID=Msa0260840;Name=Msa0260840
chr2_2 mRNA 58724428 58732321 58724428 ID=Msa0260840-mRNA-1;Parent=Msa0260840;Name=Msa0260840-mRNA-1;_AED=0.33;_eAED=0.33;_QI=0|0.54|0.33|1|0.90|0.83|12|0|691
chr2_2 exon 58724428 58724565 58724428 ID=Msa0260840-mRNA-1:exon:18084;Parent=Msa0260840-mRNA-1
chr2_2 exon 58724856 58725033 58724856 ID=Msa0260840-mRNA-1:exon:18085;Parent=Msa0260840-mRNA-1
chr2_2 exon 58725531 58725697 58725531 ID=Msa0260840-mRNA-1:exon:18086;Parent=Msa0260840-mRNA-1
chr2_2 exon 58725798 58725880 58725798 ID=Msa0260840-mRNA-1:exon:18087;Parent=Msa0260840-mRNA-1
chr2_2 exon 58726468 58726594 58726468 ID=Msa0260840-mRNA-1:exon:18088;Parent=Msa0260840-mRNA-1
chr2_2 exon 58726708 58726961 58726708 ID=Msa0260840-mRNA-1:exon:18089;Parent=Msa0260840-mRNA-1
chr2_2 exon 58729065 58729374 58729065 ID=Msa0260840-mRNA-1:exon:18090;Parent=Msa0260840-mRNA-1
chr2_2 exon 58729602 58729785 58729602 ID=Msa0260840-mRNA-1:exon:18091;Parent=Msa0260840-mRNA-1
chr2_2 exon 58730213 58730379 58730213 ID=Msa0260840-mRNA-1:exon:18092;Parent=Msa0260840-mRNA-1
chr2_2 exon 58731002 58731087 58731002 ID=Msa0260840-mRNA-1:exon:18093;Parent=Msa0260840-mRNA-1
chr2_2 exon 58731809 58731935 58731809 ID=Msa0260840-mRNA-1:exon:18094;Parent=Msa0260840-mRNA-1
chr2_2 exon 58732067 58732321 58732067 ID=Msa0260840-mRNA-1:exon:18095;Parent=Msa0260840-mRNA-1
chr2_2 CDS 58724428 58724565 58724428 ID=Msa0260840-mRNA-1:cds;Parent=Msa0260840-mRNA-1
chr2_2 CDS 58724856 58725033 58724856 ID=Msa0260840-mRNA-1:cds;Parent=Msa0260840-mRNA-1
chr2_2 CDS 58725531 58725697 58725531 ID=Msa0260840-mRNA-1:cds;Parent=Msa0260840-mRNA-1
chr2_2 CDS 58725798 58725880 58725798 ID=Msa0260840-mRNA-1:cds;Parent=Msa0260840-mRNA-1
chr2_2 CDS 58726468 58726594 58726468 ID=Msa0260840-mRNA-1:cds;Parent=Msa0260840-mRNA-1
chr2_2 CDS 58726708 58726961 58726708 ID=Msa0260840-mRNA-1:cds;Parent=Msa0260840-mRNA-1
chr2_2 CDS 58729065 58729374 58729065 ID=Msa0260840-mRNA-1:cds;Parent=Msa0260840-mRNA-1
chr2_2 CDS 58729602 58729785 58729602 ID=Msa0260840-mRNA-1:cds;Parent=Msa0260840-mRNA-1
chr2_2 CDS 58730213 58730379 58730213 ID=Msa0260840-mRNA-1:cds;Parent=Msa0260840-mRNA-1
chr2_2 CDS 58731002 58731087 58731002 ID=Msa0260840-mRNA-1:cds;Parent=Msa0260840-mRNA-1
chr2_2 CDS 58731809 58731935 58731809 ID=Msa0260840-mRNA-1:cds;Parent=Msa0260840-mRNA-1
chr2_2 CDS 58732067 58732321 58732067 ID=Msa0260840-mRNA-1:cds;Parent=Msa0260840-mRNA-1
Gene Sequence

>Msa0260840

ATGGAAGATTTGGTAGAAAGCAGAGAATGGTACTTAGCTGAATATTGTCCTGAAGGTGTTCCAACCTCAGATCATCTTAAACTCCGGACCGTCTCTCTTTCTCTTGCCAATGATTCAATCCCAGATAACCATCTAGCCGTGCTTAAAAAAGTATTTGCAATTGTAAGAGTAATTCGATCAAAGGAAAGTAAATACACTGAAGGAGATATCCTTTTGAATGGGAATGGTTACGTTGCTGAGTATAGTATTGTACCCTCTTCTGACATAATTAGGAAAATTGATCCTGCTAATGGGATTTCACTGTCGGATTATCTTGGAGTAGCGGGGTTTGCAGCATGGCTGGGAATAGAGGTAATAGGAGATCCAAAACCAGGATCACATGTGTTCATATCTGCTGCATCTGGTGCTGTTGGTATGAGTGCTGGCCAACTTGCTAAGATCCGAGGGTGTCGGGTCATCGGAAGCACGGGCTCCGATGATAAGGTGAAACTCATTAAAGAGGAATTAGGATATGACGACGGTTTCAATTACAATGCGGAATCAGACTTTGATGCCGCTTTAAGCAAGTATTTTCCTGATGGTATTGATGTTTATCTTGACAATGTTGGTGGTAAAATGCTTGAAGCTGTACTTAACCATGTCAACAAGCATGCTAGAATACCTCTTTGTGGAATGATATCTCAATATAATCAGGTTTGGACTGAAAGAGAAGGCATTAGAAATCTTCTGAATATGGTGGGAAAGGAAGTAAGGATGGAGGGTTTTATGCTAGAATCATATTGGGATCGTTTTGGAGATTTTGCCAAAGATATGGAAATATACTTACAAGAAGGCAAGATTAAGTCAAAGAATAAAATAAATATCGGAATTGAGTGCTTTTTGGAGAGTTTGAACTCCTTATTCTCTAGCTCCAACATTGGAAAAGTTGTTGTTCAAGTGAAGGCCTATCTTTGCCTATATATCATAGACAAGCCTTGCCCAATTGCAGACACTCAAACATTGCACATTGCATCCGAATTGGACATGGGAGATTTGGTAGAAAACAAAGAATGGTACGTAGCTGCATACTGTCCTGAAGGTGTTCCAACCTCGGATCATCTTAAACTCCGCACTGTTTCTCTTTCTCTTGCCGATGATTCAATCCCTGAAGACCATCTAGCCGTTGAAACTCTCCTTCTCTCCGTTGATCCATATCTTCGCGGAACAATCACCGGCACCCTTGAAGGCCTTTTTATTCCACAATATCAACTTAATCAGGTGATTACAACATTTGCAGTTGTAAGGGTAATTCGATCCAAGGATAGTAAATACAGTGAGGGGGATATCCTTTTGAATGGATATGGTCTCGTTGCTGAGTATAGCATTGTACCTTCTTTTCATATAATTAGAAAAATTGATCCTGCTAATGGGATTTCACTATCAAATTATCTCGGTTCTTTAGGAGTACCTGGGTTCGCAGCATGGTTAGGAATAGAGGTACTAGGAGACCCAAAGCCAGGATCCAATGTGTTCATATCTGCTGCTTCTGGTGCTGTTGGTATGAATGCTGGTCAGCTTGCTAAGATACGAGGATGTAGGGTCATTGGCAGCACTGGCTCTGATGAGAAGGTGAAGCTCATCAAAGAGAATTTTGGATATGATGATGGATTCAACTACAATATAGAATCAGAATTTGATGCCGCTTTAAGCAAGTCGTATTTCCCTGATGGTATTGATGTTTACCTTGACAATGTTGGTGGTAAAATGCTCGAATCTGTACTTAACCATGTCAACAAGAATGCTAGAATACCACTTTGTGGGATGATATCTCAATATAATAAGGTTTGGACCGAAAGAGAAGGCATTAGAAATCTTCTGAACATGGTGGGAAAGGAGGTGAGGATGGAAGGCTATATGGTTAAATCATATTTGCATCGTTTTGGAGATTTTGTCAAAGATATGGAAAAATACTTGCAAGAAGGCAAAATTAAGCCAAAGAGTAAAATCAATATCGGAATTGAGAACTTTTTGGAGAGCTTAAACTCTGTTTTCTCTAGTTCTAACATTGGAAAAGTTGTTGTTCAAGTTAAGGCTTAG
Protein sequence

>Msa0260840

MEDLVESREWYLAEYCPEGVPTSDHLKLRTVSLSLANDSIPDNHLAVLKKVFAIVRVIRSKESKYTEGDILLNGNGYVAEYSIVPSSDIIRKIDPANGISLSDYLGVAGFAAWLGIEVIGDPKPGSHVFISAASGAVGMSAGQLAKIRGCRVIGSTGSDDKVKLIKEELGYDDGFNYNAESDFDAALSKYFPDGIDVYLDNVGGKMLEAVLNHVNKHARIPLCGMISQYNQVWTEREGIRNLLNMVGKEVRMEGFMLESYWDRFGDFAKDMEIYLQEGKIKSKNKINIGIECFLESLNSLFSSSNIGKVVVQVKAYLCLYIIDKPCPIADTQTLHIASELDMGDLVENKEWYVAAYCPEGVPTSDHLKLRTVSLSLADDSIPEDHLAVETLLLSVDPYLRGTITGTLEGLFIPQYQLNQVITTFAVVRVIRSKDSKYSEGDILLNGYGLVAEYSIVPSFHIIRKIDPANGISLSNYLGSLGVPGFAAWLGIEVLGDPKPGSNVFISAASGAVGMNAGQLAKIRGCRVIGSTGSDEKVKLIKENFGYDDGFNYNIESEFDAALSKSYFPDGIDVYLDNVGGKMLESVLNHVNKNARIPLCGMISQYNKVWTEREGIRNLLNMVGKEVRMEGYMVKSYLHRFGDFVKDMEKYLQEGKIKPKSKINIGIENFLESLNSVFSSSNIGKVVVQVKA*