AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1119670


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1119670 MtrunA17_Chr7g0252501 84.768 151 23 0 1 151 80 230 7.03e-94 271
Msa1119670 MtrunA17_Chr7g0252361 75.658 152 36 1 1 151 214 365 1.54e-78 236
Msa1119670 MtrunA17_Chr3g0107871 76.159 151 31 2 1 149 193 340 4.03e-77 232
Msa1119670 MtrunA17_Chr7g0252351 95.000 60 3 0 92 151 1 60 1.16e-36 120
Msa1119670 MtrunA17_Chr3g0144871 45.752 153 76 3 2 149 217 367 3.02e-36 128
Msa1119670 MtrunA17_Chr6g0455081 47.581 124 60 2 30 150 9 130 1.52e-33 114
Msa1119670 MtrunA17_Chr4g0008111 35.714 154 86 3 2 149 211 357 1.69e-26 102
Msa1119670 MtrunA17_Chr1g0155451 37.419 155 88 2 2 150 65 216 3.12e-26 98.6
Msa1119670 MtrunA17_Chr8g0372821 35.185 162 91 4 2 151 211 370 7.56e-26 100
Msa1119670 MtrunA17_Chr3g0107591 33.333 162 94 3 2 151 210 369 1.23e-25 100
Msa1119670 MtrunA17_Chr6g0475221 37.013 154 89 3 1 151 206 354 9.22e-25 97.4
Msa1119670 MtrunA17_Chr8g0372671 32.903 155 94 2 1 149 210 360 4.82e-24 95.5
Msa1119670 MtrunA17_Chr5g0404631 34.810 158 93 3 2 149 222 379 7.16e-24 95.5
Msa1119670 MtrunA17_Chr1g0155471 40.984 122 64 2 31 150 9 124 8.90e-24 89.7
Msa1119670 MtrunA17_Chr6g0475241 33.121 157 89 4 1 151 211 357 1.21e-22 91.7
Msa1119670 MtrunA17_Chr8g0343971 30.968 155 93 3 2 149 211 358 3.08e-18 79.7
Msa1119670 MtrunA17_Chr8g0343981 30.128 156 92 3 1 149 210 355 9.78e-17 75.5
Msa1119670 MtrunA17_Chr3g0099271 31.034 145 83 3 2 134 57 196 1.63e-15 70.5
Msa1119670 MtrunA17_Chr5g0444921 30.818 159 91 4 2 148 238 389 1.70e-15 72.4
Msa1119670 MtrunA17_Chr3g0100101 31.298 131 77 2 2 124 229 354 1.34e-14 69.7
Msa1119670 MtrunA17_Chr5g0419851 29.221 154 93 2 2 149 277 420 2.02e-12 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1119670 AT1G19640.1 34.591 159 93 3 2 149 229 387 1.35e-26 103
Msa1119670 AT3G11480.1 35.484 155 86 2 2 149 231 378 1.35e-21 89.4
Msa1119670 AT5G04370.1 36.774 155 86 4 2 149 240 389 9.79e-21 87.4
Msa1119670 AT5G04370.3 36.774 155 86 4 2 149 245 394 1.00e-20 87.4
Msa1119670 AT5G04370.2 36.774 155 86 4 2 149 259 408 1.01e-20 87.4
Msa1119670 AT5G66430.1 37.410 139 76 3 2 131 199 335 4.12e-20 85.1
Msa1119670 AT5G38020.2 36.986 146 73 5 2 131 167 309 1.31e-19 83.6
Msa1119670 AT5G38020.1 36.986 146 73 5 2 131 206 348 1.92e-19 83.6
Msa1119670 AT3G21950.1 36.364 143 78 4 2 131 206 348 7.99e-16 73.6
Msa1119670 AT4G36470.1 27.742 155 99 2 2 150 223 370 3.91e-15 71.6
Msa1119670 AT5G04380.2 31.387 137 85 2 2 131 165 299 5.97e-15 70.9
Msa1119670 AT5G04380.3 31.387 137 85 2 2 131 236 370 8.97e-15 70.5
Msa1119670 AT2G14060.1 28.667 150 82 3 2 135 214 354 1.55e-14 69.7
Msa1119670 AT5G55250.2 31.298 131 77 2 2 124 195 320 4.86e-13 65.5
Msa1119670 AT5G55250.1 31.298 131 77 2 2 124 233 358 5.55e-13 65.5
Msa1119670 AT1G15125.1 31.356 118 70 2 9 126 215 321 4.25e-12 62.8
Msa1119670 AT5G38100.3 32.143 112 62 2 20 130 216 314 1.93e-11 60.8
Msa1119670 AT5G38100.1 31.858 113 63 2 19 130 238 337 2.03e-11 60.8
Msa1119670 AT1G68040.1 32.576 132 72 5 20 146 238 357 2.61e-11 60.5
Msa1119670 AT3G21950.2 36.697 109 62 3 30 131 272 380 4.00e-11 60.1

Find 73 sgRNAs with CRISPR-Local

Find 432 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTCATCTTACCATATTTA+AGG 0.065821 7_3:-68788456 None:intergenic
CATTCTTGGCCAAACCTTTC+GGG 0.134603 7_3:-68784566 None:intergenic
TGTAACCAACAAATAATTTA+AGG 0.184547 7_3:-68788620 None:intergenic
GTTCTCAAGGTTTGCAAATC+TGG 0.189499 7_3:+68788368 Msa1119670:CDS
CATATTAATGATATTCTTCT+TGG 0.199533 7_3:-68788490 None:intergenic
GTTTAGTGGTTCTCCATTCT+TGG 0.202312 7_3:-68784580 None:intergenic
CCATTCTTGGCCAAACCTTT+CGG 0.227156 7_3:-68784567 None:intergenic
TTTGGTTGAAGAAGCAAAAT+TGG 0.233886 7_3:+68788098 Msa1119670:CDS
ATTATTTGTTGGTTACATTT+TGG 0.234873 7_3:+68788626 Msa1119670:three_prime_UTR
GTTATTTGTTTGTTACATTT+TGG 0.250389 7_3:+68788566 Msa1119670:three_prime_UTR
TTACCATATTTAAGGATTCT+TGG 0.269472 7_3:-68788448 None:intergenic
ATTGTAACGTTAATAACTTA+TGG 0.280843 7_3:-68788591 None:intergenic
ATTGTAACGTTAATAACTTA+TGG 0.283326 7_3:-68788651 None:intergenic
GAATAAAATTTAGAATAAAA+TGG 0.295988 7_3:+68788512 Msa1119670:three_prime_UTR
AATCAACAATATCTTCTTGT+AGG 0.299467 7_3:-68788239 None:intergenic
TGACCAAGAATCCTTAAATA+TGG 0.324046 7_3:+68788445 Msa1119670:exon
TTGTAACGTTAATAACTTAT+GGG 0.344267 7_3:-68788590 None:intergenic
TTGTAACGTTAATAACTTAT+GGG 0.344267 7_3:-68788650 None:intergenic
CCTTTATGTTATTAGAGTTA+AGG 0.349929 7_3:+68788742 Msa1119670:three_prime_UTR
AAGTTATTAACGTTACAATT+TGG 0.356198 7_3:+68788655 Msa1119670:three_prime_UTR
TAAATATTTCCCTTGTTTAG+TGG 0.357448 7_3:-68784594 None:intergenic
CTTTATGTTATTAGAGTTAA+GGG 0.371408 7_3:+68788743 Msa1119670:three_prime_UTR
TGTTTCACTTCCTCTATAGT+AGG 0.377591 7_3:-68788147 None:intergenic
TGTAACAAACAAATAACTTA+AGG 0.379096 7_3:-68788560 None:intergenic
CCTTAACTCTAATAACATAA+AGG 0.404110 7_3:-68788742 None:intergenic
CATTTAGGCCCCGAAAGGTT+TGG 0.417248 7_3:+68784557 None:intergenic
TTAAAATATGCTTCATAGAC+TGG 0.421359 7_3:-68784639 None:intergenic
TAGTCCCTTAAATTATTTGT+TGG 0.439030 7_3:+68788615 Msa1119670:three_prime_UTR
TCTTCCTCCGTCAACCAATC+TGG 0.460750 7_3:+68788718 Msa1119670:three_prime_UTR
CCGAAAGGTTTGGCCAAGAA+TGG 0.461973 7_3:+68784567 Msa1119670:five_prime_UTR
GTAACAAACAAATAACTTAA+GGG 0.464278 7_3:-68788559 None:intergenic
TTCGAGGAATTAACAACTGA+TGG 0.468183 7_3:+68784702 Msa1119670:five_prime_UTR
ATGATGGCATTAACATTTGT+TGG 0.472815 7_3:+68784726 Msa1119670:CDS
ATAAACAGCCCTGTGATACT+TGG 0.473009 7_3:-68788298 None:intergenic
GTAACCAACAAATAATTTAA+GGG 0.476191 7_3:-68788619 None:intergenic
TCTATAGTAGGATGATATAC+AGG 0.482913 7_3:-68788135 None:intergenic
AAAAGTCTTCAATGTTTGAA+GGG 0.485869 7_3:-68788196 None:intergenic
TGTATATCATCCTACTATAG+AGG 0.486196 7_3:+68788137 Msa1119670:CDS
AATTCATAGCCAAGTATCAC+AGG 0.487711 7_3:+68788289 Msa1119670:CDS
TAAAAGTCTTCAATGTTTGA+AGG 0.490410 7_3:-68788197 None:intergenic
TCATGGATGAATTGTTCTCA+AGG 0.497534 7_3:+68788355 Msa1119670:CDS
AATTTAGAATAAAATGGTAA+AGG 0.516525 7_3:+68788518 Msa1119670:three_prime_UTR
ATTAACAACTGATGGGATGA+TGG 0.518595 7_3:+68784710 Msa1119670:exon
AATAACATAAAGGACCAGAT+TGG 0.527815 7_3:-68788732 None:intergenic
TTCTCAAGGGGTAATTGCCA+TGG 0.534080 7_3:+68784770 Msa1119670:CDS
TATGCTTCATAGACTGGTGG+AGG 0.535027 7_3:-68784633 None:intergenic
CCAAACCCGGCTATGAAAAG+AGG 0.536351 7_3:-68788324 None:intergenic
TTGTCGATAGCAAAATGAGA+GGG 0.543353 7_3:+68788265 Msa1119670:CDS
GGTTGACGGAGGAAGAGTTA+AGG 0.546741 7_3:-68788711 None:intergenic
ATTCTTGGCCAAACCTTTCG+GGG 0.560520 7_3:-68784565 None:intergenic
GGAAGTGAAACAAGTGATTG+AGG 0.563062 7_3:+68788158 Msa1119670:CDS
CCTTAAATATGGTAAGATGA+AGG 0.563859 7_3:+68788456 Msa1119670:exon
ACTCATTGAGATAGAGACAT+TGG 0.576407 7_3:+68788398 Msa1119670:CDS
AACTACCACTTCTTCTCAAG+GGG 0.577750 7_3:+68784758 Msa1119670:CDS
TGCCATGGTACTCAATGAGA+TGG 0.578688 7_3:+68784785 Msa1119670:CDS
ACAACTACCACTTCTTCTCA+AGG 0.579517 7_3:+68784756 Msa1119670:CDS
CAACTACCACTTCTTCTCAA+GGG 0.581594 7_3:+68784757 Msa1119670:CDS
TCGAGGAATTAACAACTGAT+GGG 0.582747 7_3:+68784703 Msa1119670:five_prime_UTR
GAATGGAGAACCACTAAACA+AGG 0.590677 7_3:+68784584 Msa1119670:five_prime_UTR
AATTACCCCTTGAGAAGAAG+TGG 0.590678 7_3:-68784763 None:intergenic
AAATATGCTTCATAGACTGG+TGG 0.602942 7_3:-68784636 None:intergenic
TAAAGGACCAGATTGGTTGA+CGG 0.603034 7_3:-68788725 None:intergenic
TGTGACATTTAGGCCCCGAA+AGG 0.611420 7_3:+68784552 None:intergenic
AAACAAGTGATTGAGGCAGA+AGG 0.616874 7_3:+68788165 Msa1119670:CDS
CGGGTTTGGAGAAAACATCA+TGG 0.634728 7_3:+68788338 Msa1119670:CDS
GTTGTCGATAGCAAAATGAG+AGG 0.657254 7_3:+68788264 Msa1119670:CDS
ATGCTTCATAGACTGGTGGA+GGG 0.673189 7_3:-68784632 None:intergenic
GACCATCTCATTGAGTACCA+TGG 0.681630 7_3:-68784787 None:intergenic
ACTCAATGAGATGGTCCAAG+AGG 0.686877 7_3:+68784794 Msa1119670:CDS
AATGGAGAACCACTAAACAA+GGG 0.694091 7_3:+68784585 Msa1119670:five_prime_UTR
AGGACCAGATTGGTTGACGG+AGG 0.698152 7_3:-68788722 None:intergenic
TGTCGATAGCAAAATGAGAG+GGG 0.698320 7_3:+68788266 Msa1119670:CDS
ATTCATAGCCAAGTATCACA+GGG 0.701859 7_3:+68788290 Msa1119670:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTCAAAATAAAAATCTTAAA+CGG + chr7_3:68784871-68784890 Msa1119670:intron 10.0%
!!! TTTTTTTTTTTCCTTTTTAA+GGG - chr7_3:68787440-68787459 None:intergenic 10.0%
!!! TAAGTAAATTTTTTTTTGTA+GGG - chr7_3:68787568-68787587 None:intergenic 10.0%
!!! ATAAGTAAATTTTTTTTTGT+AGG - chr7_3:68787569-68787588 None:intergenic 10.0%
!!! TTTCTTTTTCTTTTTTTTTT+TGG + chr7_3:68787639-68787658 Msa1119670:intron 10.0%
!!! TTTTTATCTTTATTTTCATA+GGG - chr7_3:68787705-68787724 None:intergenic 10.0%
!!! TTTTTTATCTTTATTTTCAT+AGG - chr7_3:68787706-68787725 None:intergenic 10.0%
!! ATAAAAAATATCAACATTAT+TGG + chr7_3:68787718-68787737 Msa1119670:intron 10.0%
!! TAAAAAATATCAACATTATT+GGG + chr7_3:68787719-68787738 Msa1119670:intron 10.0%
!!! GAATAAAATTTAGAATAAAA+TGG + chr7_3:68788512-68788531 Msa1119670:three_prime_UTR 10.0%
!!! AATAAATAAGGGTATATTAA+TGG + chr7_3:68787022-68787041 Msa1119670:intron 15.0%
!! AAAAATAATAAATGTTGCAT+TGG + chr7_3:68787047-68787066 Msa1119670:intron 15.0%
!!! ATTTTGAGAAAAAGAAAAAA+TGG + chr7_3:68787088-68787107 Msa1119670:intron 15.0%
!! TAAAATAAATATGGATATGT+TGG + chr7_3:68787144-68787163 Msa1119670:intron 15.0%
!! ACTAAAAATGTCTTATATTT+AGG + chr7_3:68787231-68787250 Msa1119670:intron 15.0%
!! CTAAAAATGTCTTATATTTA+GGG + chr7_3:68787232-68787251 Msa1119670:intron 15.0%
!! ATTATAGTAAACTTTATATC+GGG - chr7_3:68787389-68787408 None:intergenic 15.0%
!! CATTATAGTAAACTTTATAT+CGG - chr7_3:68787390-68787409 None:intergenic 15.0%
!!! TTTTTTTTTTCCTTTTTAAG+GGG - chr7_3:68787439-68787458 None:intergenic 15.0%
!!! GTTTTTTTTTTTCCTTTTTA+AGG - chr7_3:68787441-68787460 None:intergenic 15.0%
!! AATGCTATTAAAATTAAGTA+AGG - chr7_3:68787539-68787558 None:intergenic 15.0%
!!! AAAATTTTAATTGCATGTTT+TGG + chr7_3:68787607-68787626 Msa1119670:intron 15.0%
!!! TCAACATATTACATTTTTTT+TGG + chr7_3:68787973-68787992 Msa1119670:intron 15.0%
!! TAGATAAAAAAAATAAACCT+TGG + chr7_3:68788024-68788043 Msa1119670:intron 15.0%
!!! AATTTAGAATAAAATGGTAA+AGG + chr7_3:68788518-68788537 Msa1119670:three_prime_UTR 15.0%
!! TAAACCAAAAAATAAGTTAA+GGG - chr7_3:68788682-68788701 None:intergenic 15.0%
!! AGATTTCTATCAATATTTGT+AGG + chr7_3:68784898-68784917 Msa1119670:intron 20.0%
!! GATTTCTATCAATATTTGTA+GGG + chr7_3:68784899-68784918 Msa1119670:intron 20.0%
!! TGGATGAAATTCAATAAATA+AGG + chr7_3:68787010-68787029 Msa1119670:intron 20.0%
!! GGATGAAATTCAATAAATAA+GGG + chr7_3:68787011-68787030 Msa1119670:intron 20.0%
!! CGATATAAAGTTTACTATAA+TGG + chr7_3:68787388-68787407 Msa1119670:intron 20.0%
!!! GCAATTAAAATTTTTTAGCA+GGG - chr7_3:68787601-68787620 None:intergenic 20.0%
!!! TGCAATTAAAATTTTTTAGC+AGG - chr7_3:68787602-68787621 None:intergenic 20.0%
!!! TGAAACCCATTTATTTTTAT+GGG + chr7_3:68787777-68787796 Msa1119670:intron 20.0%
!! GAAAACCCATAAAAATAAAT+GGG - chr7_3:68787785-68787804 None:intergenic 20.0%
!! AAAATCTGGGAATATAATTA+GGG - chr7_3:68787908-68787927 None:intergenic 20.0%
!!! ACATATTACATTTTTTTTGG+TGG + chr7_3:68787976-68787995 Msa1119670:intron 20.0%
!! ATAAGGAATCTTAATACAAA+AGG - chr7_3:68788067-68788086 None:intergenic 20.0%
!!! TAAGATTCCTTATAATTTGT+AGG + chr7_3:68788074-68788093 Msa1119670:intron 20.0%
!!! AAGATTCCTTATAATTTGTA+GGG + chr7_3:68788075-68788094 Msa1119670:intron 20.0%
!!! ACATTGAAGACTTTTAATAT+CGG + chr7_3:68788204-68788223 Msa1119670:CDS 20.0%
!! CATATTAATGATATTCTTCT+TGG - chr7_3:68788493-68788512 None:intergenic 20.0%
!! GTAACAAACAAATAACTTAA+GGG - chr7_3:68788562-68788581 None:intergenic 20.0%
!! TGTAACAAACAAATAACTTA+AGG - chr7_3:68788563-68788582 None:intergenic 20.0%
!!! GTTATTTGTTTGTTACATTT+TGG + chr7_3:68788566-68788585 Msa1119670:three_prime_UTR 20.0%
!! TTGTAACGTTAATAACTTAT+GGG - chr7_3:68788593-68788612 None:intergenic 20.0%
!! ATTGTAACGTTAATAACTTA+TGG - chr7_3:68788594-68788613 None:intergenic 20.0%
!! GTAACCAACAAATAATTTAA+GGG - chr7_3:68788622-68788641 None:intergenic 20.0%
!! TGTAACCAACAAATAATTTA+AGG - chr7_3:68788623-68788642 None:intergenic 20.0%
!!! ATTATTTGTTGGTTACATTT+TGG + chr7_3:68788626-68788645 Msa1119670:three_prime_UTR 20.0%
!! TTGTAACGTTAATAACTTAT+GGG - chr7_3:68788593-68788612 None:intergenic 20.0%
!! ATTGTAACGTTAATAACTTA+TGG - chr7_3:68788594-68788613 None:intergenic 20.0%
!! AAGTTATTAACGTTACAATT+TGG + chr7_3:68788595-68788614 Msa1119670:three_prime_UTR 20.0%
!! CTAAACCAAAAAATAAGTTA+AGG - chr7_3:68788683-68788702 None:intergenic 20.0%
!!! CTTATTTTTTGGTTTAGTTT+TGG + chr7_3:68788686-68788705 Msa1119670:three_prime_UTR 20.0%
!! TAAATATTTCCCTTGTTTAG+TGG - chr7_3:68784597-68784616 None:intergenic 25.0%
! TTAAAATATGCTTCATAGAC+TGG - chr7_3:68784642-68784661 None:intergenic 25.0%
!!! TTTTATTTTGAACTGTTGAG+TGG - chr7_3:68784863-68784882 None:intergenic 25.0%
!!! TACAGTGTTTGTTTTTGTTA+AGG - chr7_3:68785184-68785203 None:intergenic 25.0%
! CAAACAACAAACAAATCAAA+AGG + chr7_3:68785620-68785639 Msa1119670:intron 25.0%
! ACAAACAAATCAAAAGGAAA+AGG + chr7_3:68785626-68785645 Msa1119670:intron 25.0%
! AAACGACTATAATTTAGAGA+TGG - chr7_3:68786878-68786897 None:intergenic 25.0%
! CTCTAAATTATAGTCGTTTA+AGG + chr7_3:68786879-68786898 Msa1119670:intron 25.0%
!! GAGGGAGTATAAAATAAATA+TGG + chr7_3:68787135-68787154 Msa1119670:intron 25.0%
!! CTCTTTTTATAAGACATCTT+TGG - chr7_3:68787199-68787218 None:intergenic 25.0%
!! AGTAGGGTTAATTATGTTTT+TGG + chr7_3:68787481-68787500 Msa1119670:intron 25.0%
!! TACAAGATTGCAATTTTGTA+GGG - chr7_3:68787508-68787527 None:intergenic 25.0%
!! TTACAAGATTGCAATTTTGT+AGG - chr7_3:68787509-68787528 None:intergenic 25.0%
!! CATAAAAATAAATGGGTTTC+AGG - chr7_3:68787778-68787797 None:intergenic 25.0%
!!! CTGAAACCCATTTATTTTTA+TGG + chr7_3:68787776-68787795 Msa1119670:intron 25.0%
! GGAAAACCCATAAAAATAAA+TGG - chr7_3:68787786-68787805 None:intergenic 25.0%
! AAATCTGGGAATATAATTAG+GGG - chr7_3:68787907-68787926 None:intergenic 25.0%
! CAAAATCTGGGAATATAATT+AGG - chr7_3:68787909-68787928 None:intergenic 25.0%
! ATAGAAATGACACAAAATCT+GGG - chr7_3:68787921-68787940 None:intergenic 25.0%
! TATAGAAATGACACAAAATC+TGG - chr7_3:68787922-68787941 None:intergenic 25.0%
! AAAAGTCTTCAATGTTTGAA+GGG - chr7_3:68788199-68788218 None:intergenic 25.0%
! TAAAAGTCTTCAATGTTTGA+AGG - chr7_3:68788200-68788219 None:intergenic 25.0%
! AATCAACAATATCTTCTTGT+AGG - chr7_3:68788242-68788261 None:intergenic 25.0%
! TTACCATATTTAAGGATTCT+TGG - chr7_3:68788451-68788470 None:intergenic 25.0%
! TAGTCCCTTAAATTATTTGT+TGG + chr7_3:68788615-68788634 Msa1119670:three_prime_UTR 25.0%
ATGATGGCATTAACATTTGT+TGG + chr7_3:68784726-68784745 Msa1119670:CDS 30.0%
!! GGGTCTTTTTGGAAAAATAA+CGG + chr7_3:68784956-68784975 Msa1119670:intron 30.0%
!! GGTCTTTTTGGAAAAATAAC+GGG + chr7_3:68784957-68784976 Msa1119670:intron 30.0%
CGGGAATTAAGAAAATTGAA+AGG + chr7_3:68784976-68784995 Msa1119670:intron 30.0%
!!! AATTTTTAGGGGTGTTCTTT+GGG - chr7_3:68785245-68785264 None:intergenic 30.0%
!!! TAATTTTTAGGGGTGTTCTT+TGG - chr7_3:68785246-68785265 None:intergenic 30.0%
!! TACGGGAGTTTAATTTTTAG+GGG - chr7_3:68785256-68785275 None:intergenic 30.0%
!! GTACGGGAGTTTAATTTTTA+GGG - chr7_3:68785257-68785276 None:intergenic 30.0%
!! AGTACGGGAGTTTAATTTTT+AGG - chr7_3:68785258-68785277 None:intergenic 30.0%
! GGTTTTTATGGTGTTTCTTT+CGG - chr7_3:68785363-68785382 None:intergenic 30.0%
!!! AGTTTGGTTTTGGGTTTTTA+TGG - chr7_3:68785375-68785394 None:intergenic 30.0%
!!! TTTGGATCAAGTTTGGTTTT+GGG - chr7_3:68785384-68785403 None:intergenic 30.0%
!! ATTTGGATCAAGTTTGGTTT+TGG - chr7_3:68785385-68785404 None:intergenic 30.0%
TCAGTTATTTGGATCAAGTT+TGG - chr7_3:68785391-68785410 None:intergenic 30.0%
!! ACTTTAAGACCAAAACAGAA+GGG + chr7_3:68785447-68785466 Msa1119670:intron 30.0%
TGTCTTACTTATTGTGTGTT+GGG - chr7_3:68785578-68785597 None:intergenic 30.0%
TTGTCTTACTTATTGTGTGT+TGG - chr7_3:68785579-68785598 None:intergenic 30.0%
GACTATAATTTAGAGATGGA+GGG - chr7_3:68786874-68786893 None:intergenic 30.0%
CCACTAACTACAACTAATAA+GGG - chr7_3:68786979-68786998 None:intergenic 30.0%
TCCACTAACTACAACTAATA+AGG - chr7_3:68786980-68786999 None:intergenic 30.0%
! TTAACCCTACTTTGAAAGTT+AGG - chr7_3:68787472-68787491 None:intergenic 30.0%
GTACAACAATTTGTATGCTT+TGG + chr7_3:68787661-68787680 Msa1119670:intron 30.0%
TATCAACATTATTGGGTAAG+TGG + chr7_3:68787726-68787745 Msa1119670:intron 30.0%
ATCAACATTATTGGGTAAGT+GGG + chr7_3:68787727-68787746 Msa1119670:intron 30.0%
!! AAAAAATGGGTTGGGTAATT+GGG - chr7_3:68787829-68787848 None:intergenic 30.0%
!! AAAAAAATGGGTTGGGTAAT+TGG - chr7_3:68787830-68787849 None:intergenic 30.0%
!!! AATTACCCAACCCATTTTTT+TGG + chr7_3:68787829-68787848 Msa1119670:intron 30.0%
!!! ATTACCCAACCCATTTTTTT+GGG + chr7_3:68787830-68787849 Msa1119670:intron 30.0%
! AAAACCCAAAAAAATGGGTT+GGG - chr7_3:68787837-68787856 None:intergenic 30.0%
AAAAACCCAAAAAAATGGGT+TGG - chr7_3:68787838-68787857 None:intergenic 30.0%
!!! ACCCATTTTTTTGGGTTTTT+TGG + chr7_3:68787838-68787857 Msa1119670:intron 30.0%
CCCAAAAAACCCAAAAAAAT+GGG - chr7_3:68787842-68787861 None:intergenic 30.0%
!!! CCCATTTTTTTGGGTTTTTT+GGG + chr7_3:68787839-68787858 Msa1119670:intron 30.0%
ACCCAAAAAACCCAAAAAAA+TGG - chr7_3:68787843-68787862 None:intergenic 30.0%
!!! ATTTTTTTGGGTTTTTTGGG+TGG + chr7_3:68787842-68787861 Msa1119670:intron 30.0%
!!! TTTTTTTGGGTTTTTTGGGT+GGG + chr7_3:68787843-68787862 Msa1119670:intron 30.0%
!! ATATAATTAGGGGTGTTCAT+GGG - chr7_3:68787897-68787916 None:intergenic 30.0%
!! AATATAATTAGGGGTGTTCA+TGG - chr7_3:68787898-68787917 None:intergenic 30.0%
! TCCTTATAATTTGTAGGGTT+TGG + chr7_3:68788080-68788099 Msa1119670:intron 30.0%
ACCAAACCCTACAAATTATA+AGG - chr7_3:68788084-68788103 None:intergenic 30.0%
TTTGGTTGAAGAAGCAAAAT+TGG + chr7_3:68788098-68788117 Msa1119670:CDS 30.0%
TCTATAGTAGGATGATATAC+AGG - chr7_3:68788138-68788157 None:intergenic 30.0%
TGTATATCATCCTACTATAG+AGG + chr7_3:68788137-68788156 Msa1119670:CDS 30.0%
! TGAAGACTTTTAATATCGGT+TGG + chr7_3:68788208-68788227 Msa1119670:CDS 30.0%
!! GAAGACTTTTAATATCGGTT+GGG + chr7_3:68788209-68788228 Msa1119670:CDS 30.0%
TGACCAAGAATCCTTAAATA+TGG + chr7_3:68788445-68788464 Msa1119670:exon 30.0%
CCTTCATCTTACCATATTTA+AGG - chr7_3:68788459-68788478 None:intergenic 30.0%
CCTTAAATATGGTAAGATGA+AGG + chr7_3:68788456-68788475 Msa1119670:exon 30.0%
!!! TGGTCCCTTAACTTATTTTT+TGG + chr7_3:68788675-68788694 Msa1119670:three_prime_UTR 30.0%
AATAACATAAAGGACCAGAT+TGG - chr7_3:68788735-68788754 None:intergenic 30.0%
AATGGAGAACCACTAAACAA+GGG + chr7_3:68784585-68784604 Msa1119670:five_prime_UTR 35.0%
AAATATGCTTCATAGACTGG+TGG - chr7_3:68784639-68784658 None:intergenic 35.0%
!!! TTTTCTAAAGTCACGTTTCG+AGG + chr7_3:68784686-68784705 Msa1119670:five_prime_UTR 35.0%
TTCGAGGAATTAACAACTGA+TGG + chr7_3:68784702-68784721 Msa1119670:five_prime_UTR 35.0%
TCGAGGAATTAACAACTGAT+GGG + chr7_3:68784703-68784722 Msa1119670:five_prime_UTR 35.0%
ATTAACAACTGATGGGATGA+TGG + chr7_3:68784710-68784729 Msa1119670:exon 35.0%
CAAATCTCATCATTACCTCT+TGG - chr7_3:68784812-68784831 None:intergenic 35.0%
CCAAAAAGACCCTCTAATTA+GGG - chr7_3:68784948-68784967 None:intergenic 35.0%
TCCAAAAAGACCCTCTAATT+AGG - chr7_3:68784949-68784968 None:intergenic 35.0%
! TTTGTTAAGGTGTCTGTCTT+AGG - chr7_3:68785171-68785190 None:intergenic 35.0%
!!! ATTTTTAGGGGTGTTCTTTG+GGG - chr7_3:68785244-68785263 None:intergenic 35.0%
! TTTTATGGTGTTTCTTTCGG+TGG - chr7_3:68785360-68785379 None:intergenic 35.0%
!! ATCACTTTTGATTCGAGATC+GGG - chr7_3:68785416-68785435 None:intergenic 35.0%
!! GATCACTTTTGATTCGAGAT+CGG - chr7_3:68785417-68785436 None:intergenic 35.0%
!!! TTTTGGTCTTAAAGTCTGGT+GGG - chr7_3:68785442-68785461 None:intergenic 35.0%
!!! TCTGTTTTGGTCTTAAAGTC+TGG - chr7_3:68785446-68785465 None:intergenic 35.0%
!! GACTTTAAGACCAAAACAGA+AGG + chr7_3:68785446-68785465 Msa1119670:intron 35.0%
!! CAATCTTGTTTGGCTTGATA+TGG - chr7_3:68785503-68785522 None:intergenic 35.0%
TGTCTAGTTGCAATCTTGTT+TGG - chr7_3:68785513-68785532 None:intergenic 35.0%
ACAAACAACATGATAAGCGA+TGG + chr7_3:68785595-68785614 Msa1119670:intron 35.0%
! GTTAAGGTGTTTAAGGTGTT+TGG - chr7_3:68785677-68785696 None:intergenic 35.0%
! TTGGGTTGTTAAGGTGTTTA+AGG - chr7_3:68785684-68785703 None:intergenic 35.0%
!!! TTTGCGTTTTTGGGTTGTTA+AGG - chr7_3:68785693-68785712 None:intergenic 35.0%
!! TAGCTCTTGTTTGCGTTTTT+GGG - chr7_3:68785702-68785721 None:intergenic 35.0%
!! TTGATTTGGGTGATTTCCTT+TGG - chr7_3:68785763-68785782 None:intergenic 35.0%
TGCGTATGAGAGCTATTAAT+GGG - chr7_3:68785819-68785838 None:intergenic 35.0%
TTGCGTATGAGAGCTATTAA+TGG - chr7_3:68785820-68785839 None:intergenic 35.0%
! GATCTGTTTTCAGATCTAGT+TGG - chr7_3:68786489-68786508 None:intergenic 35.0%
AAGAAAAACGAAGGAGGAAA+GGG + chr7_3:68786688-68786707 Msa1119670:intron 35.0%
!! TTAGAGAGAGAAAGCGTTTA+TGG + chr7_3:68786747-68786766 Msa1119670:intron 35.0%
CGACTATAATTTAGAGATGG+AGG - chr7_3:68786875-68786894 None:intergenic 35.0%
CCCTTATTAGTTGTAGTTAG+TGG + chr7_3:68786976-68786995 Msa1119670:intron 35.0%
AGTTAGTGGAGTAGTTAAGT+TGG + chr7_3:68786990-68787009 Msa1119670:intron 35.0%
TGACAATTATTGTGAGACAG+AGG + chr7_3:68787116-68787135 Msa1119670:intron 35.0%
GACAATTATTGTGAGACAGA+GGG + chr7_3:68787117-68787136 Msa1119670:intron 35.0%
TGTCTTATATTTAGGGACGA+AGG + chr7_3:68787239-68787258 Msa1119670:intron 35.0%
TCGTCATATTCCCCTTAAAA+AGG + chr7_3:68787426-68787445 Msa1119670:intron 35.0%
TCCTACCTAACTTTCAAAGT+AGG + chr7_3:68787464-68787483 Msa1119670:intron 35.0%
CCTACCTAACTTTCAAAGTA+GGG + chr7_3:68787465-68787484 Msa1119670:intron 35.0%
!!! TATTGGGTAAGTGGGTTTTT+TGG + chr7_3:68787735-68787754 Msa1119670:intron 35.0%
!!! ATTGGGTAAGTGGGTTTTTT+GGG + chr7_3:68787736-68787755 Msa1119670:intron 35.0%
! GTGGGTATGGTTTCTAAAAA+TGG - chr7_3:68787807-68787826 None:intergenic 35.0%
TGTTTCACTTCCTCTATAGT+AGG - chr7_3:68788150-68788169 None:intergenic 35.0%
TTGTCGATAGCAAAATGAGA+GGG + chr7_3:68788265-68788284 Msa1119670:CDS 35.0%
AATTCATAGCCAAGTATCAC+AGG + chr7_3:68788289-68788308 Msa1119670:CDS 35.0%
ATTCATAGCCAAGTATCACA+GGG + chr7_3:68788290-68788309 Msa1119670:CDS 35.0%
! TATGAACCTCTTTTCATAGC+CGG + chr7_3:68788318-68788337 Msa1119670:CDS 35.0%
TCATGGATGAATTGTTCTCA+AGG + chr7_3:68788355-68788374 Msa1119670:CDS 35.0%
ACTCATTGAGATAGAGACAT+TGG + chr7_3:68788398-68788417 Msa1119670:CDS 35.0%
GTTTAGTGGTTCTCCATTCT+TGG - chr7_3:68784583-68784602 None:intergenic 40.0%
GAATGGAGAACCACTAAACA+AGG + chr7_3:68784584-68784603 Msa1119670:five_prime_UTR 40.0%
ACAACTACCACTTCTTCTCA+AGG + chr7_3:68784756-68784775 Msa1119670:CDS 40.0%
CAACTACCACTTCTTCTCAA+GGG + chr7_3:68784757-68784776 Msa1119670:CDS 40.0%
AACTACCACTTCTTCTCAAG+GGG + chr7_3:68784758-68784777 Msa1119670:CDS 40.0%
AATTACCCCTTGAGAAGAAG+TGG - chr7_3:68784766-68784785 None:intergenic 40.0%
AAAGACCCTCTAATTAGGGA+CGG - chr7_3:68784944-68784963 None:intergenic 40.0%
! CCCTAATTAGAGGGTCTTTT+TGG + chr7_3:68784945-68784964 Msa1119670:intron 40.0%
TGGACGACACAAGATACAAA+TGG + chr7_3:68785072-68785091 Msa1119670:intron 40.0%
TATGGTGTACCGTCTATATG+CGG - chr7_3:68785100-68785119 None:intergenic 40.0%
!! TGTTGGTGGGTTTATCTTTG+GGG - chr7_3:68785138-68785157 None:intergenic 40.0%
!! GTGTTGGTGGGTTTATCTTT+GGG - chr7_3:68785139-68785158 None:intergenic 40.0%
!! TGTGTTGGTGGGTTTATCTT+TGG - chr7_3:68785140-68785159 None:intergenic 40.0%
!!! TTTTTAGGGGTGTTCTTTGG+GGG - chr7_3:68785243-68785262 None:intergenic 40.0%
!!! GTTTTGGTCTTAAAGTCTGG+TGG - chr7_3:68785443-68785462 None:intergenic 40.0%
ATGGTAATTCTCTGGTCTAC+CGG - chr7_3:68785484-68785503 None:intergenic 40.0%
GGCTTGATATGGTAATTCTC+TGG - chr7_3:68785492-68785511 None:intergenic 40.0%
!!! GTTACTTTTGCTTCGAGATC+GGG - chr7_3:68785542-68785561 None:intergenic 40.0%
!!! GGTTACTTTTGCTTCGAGAT+CGG - chr7_3:68785543-68785562 None:intergenic 40.0%
GATCTCGAAGCAAAAGTAAC+CGG + chr7_3:68785542-68785561 Msa1119670:intron 40.0%
ACTTATTGTGTGTTGGGTTC+CGG - chr7_3:68785572-68785591 None:intergenic 40.0%
! AGGTGTTTAAGGTGTTTGGA+GGG - chr7_3:68785673-68785692 None:intergenic 40.0%
! AAGGTGTTTAAGGTGTTTGG+AGG - chr7_3:68785674-68785693 None:intergenic 40.0%
!! CTAGCTCTTGTTTGCGTTTT+TGG - chr7_3:68785703-68785722 None:intergenic 40.0%
ATTTGGGTGATTTCCTTTGG+AGG - chr7_3:68785760-68785779 None:intergenic 40.0%
TATGAGAGCTATTAATGGGG+TGG - chr7_3:68785815-68785834 None:intergenic 40.0%
GCGTATGAGAGCTATTAATG+GGG - chr7_3:68785818-68785837 None:intergenic 40.0%
!! TGTTGGTGATTTGATTGAGG+TGG - chr7_3:68785904-68785923 None:intergenic 40.0%
!! AGGTGTTGGTGATTTGATTG+AGG - chr7_3:68785907-68785926 None:intergenic 40.0%
!!! TCGGATTTTGCTTGATTTGG+TGG - chr7_3:68785957-68785976 None:intergenic 40.0%
! GGTTCGGATTTTGCTTGATT+TGG - chr7_3:68785960-68785979 None:intergenic 40.0%
CGATCTGTGTGATCCAATTT+CGG - chr7_3:68786102-68786121 None:intergenic 40.0%
!! CATCGATTGTGGTTTTTGTG+AGG - chr7_3:68786164-68786183 None:intergenic 40.0%
AGATATGTGCAGATCTGTGT+TGG - chr7_3:68786393-68786412 None:intergenic 40.0%
! TTTTCAGATCTAGTTGGAGG+AGG - chr7_3:68786483-68786502 None:intergenic 40.0%
! CTGTTTTCAGATCTAGTTGG+AGG - chr7_3:68786486-68786505 None:intergenic 40.0%
TTCATGTCCAGTTTCTGTTG+CGG - chr7_3:68786514-68786533 None:intergenic 40.0%
CATGATGTAGATTCTAGCAG+CGG - chr7_3:68786645-68786664 None:intergenic 40.0%
GCTAGAATCTACATCATGAG+TGG + chr7_3:68786647-68786666 Msa1119670:intron 40.0%
GAATCTACATCATGAGTGGT+TGG + chr7_3:68786651-68786670 Msa1119670:intron 40.0%
ACATCATGAGTGGTTGGATT+TGG + chr7_3:68786657-68786676 Msa1119670:intron 40.0%
AGTGGTTGGATTTGGATTGT+GGG + chr7_3:68786665-68786684 Msa1119670:intron 40.0%
GATTGTGGGAAGAAAAACGA+AGG + chr7_3:68786679-68786698 Msa1119670:intron 40.0%
GAAGAAAAACGAAGGAGGAA+AGG + chr7_3:68786687-68786706 Msa1119670:intron 40.0%
AGAAAAACGAAGGAGGAAAG+GGG + chr7_3:68786689-68786708 Msa1119670:intron 40.0%
! CCCTACTTTGAAAGTTAGGT+AGG - chr7_3:68787468-68787487 None:intergenic 40.0%
!!! TGGGTTTGACCAGGTTTTTT+GGG + chr7_3:68787862-68787881 Msa1119670:intron 40.0%
CAAATCACAAGCTAAAGCCA+AGG - chr7_3:68788044-68788063 None:intergenic 40.0%
GGAAGTGAAACAAGTGATTG+AGG + chr7_3:68788158-68788177 Msa1119670:CDS 40.0%
AAACAAGTGATTGAGGCAGA+AGG + chr7_3:68788165-68788184 Msa1119670:CDS 40.0%
GTTGTCGATAGCAAAATGAG+AGG + chr7_3:68788264-68788283 Msa1119670:CDS 40.0%
TGTCGATAGCAAAATGAGAG+GGG + chr7_3:68788266-68788285 Msa1119670:CDS 40.0%
ATAAACAGCCCTGTGATACT+TGG - chr7_3:68788301-68788320 None:intergenic 40.0%
! ATGAACCTCTTTTCATAGCC+GGG + chr7_3:68788319-68788338 Msa1119670:CDS 40.0%
! CATGATGTTTTCTCCAAACC+CGG - chr7_3:68788340-68788359 None:intergenic 40.0%
GTTCTCAAGGTTTGCAAATC+TGG + chr7_3:68788368-68788387 Msa1119670:CDS 40.0%
! TAAAGGACCAGATTGGTTGA+CGG - chr7_3:68788728-68788747 None:intergenic 40.0%
ATTCTTGGCCAAACCTTTCG+GGG - chr7_3:68784568-68784587 None:intergenic 45.0%
CATTCTTGGCCAAACCTTTC+GGG - chr7_3:68784569-68784588 None:intergenic 45.0%
CCATTCTTGGCCAAACCTTT+CGG - chr7_3:68784570-68784589 None:intergenic 45.0%
ATGCTTCATAGACTGGTGGA+GGG - chr7_3:68784635-68784654 None:intergenic 45.0%
TATGCTTCATAGACTGGTGG+AGG - chr7_3:68784636-68784655 None:intergenic 45.0%
TTCTCAAGGGGTAATTGCCA+TGG + chr7_3:68784770-68784789 Msa1119670:CDS 45.0%
TGCCATGGTACTCAATGAGA+TGG + chr7_3:68784785-68784804 Msa1119670:CDS 45.0%
GACCATCTCATTGAGTACCA+TGG - chr7_3:68784790-68784809 None:intergenic 45.0%
ACTCAATGAGATGGTCCAAG+AGG + chr7_3:68784794-68784813 Msa1119670:CDS 45.0%
TACCTCCGTCCCTAATTAGA+GGG + chr7_3:68784936-68784955 Msa1119670:intron 45.0%
!! CAAATGGTGCCGCATATAGA+CGG + chr7_3:68785088-68785107 Msa1119670:intron 45.0%
!! GGGGCTTTGTTTAGTGGTTA+TGG - chr7_3:68785118-68785137 None:intergenic 45.0%
!! TCTTTGGGGGCTTTGTTTAG+TGG - chr7_3:68785124-68785143 None:intergenic 45.0%
!! GTTGGTGGGTTTATCTTTGG+GGG - chr7_3:68785137-68785156 None:intergenic 45.0%
! TCTTAGGTGGTGATGTGTGT+TGG - chr7_3:68785155-68785174 None:intergenic 45.0%
! GTTAAGGTGTCTGTCTTAGG+TGG - chr7_3:68785168-68785187 None:intergenic 45.0%
!! TCAGCTTGGGTGTTGAAGTA+CGG - chr7_3:68785274-68785293 None:intergenic 45.0%
TCTTCTGGATAGGAGCTCTT+CGG - chr7_3:68785304-68785323 None:intergenic 45.0%
AGCTGCATCATCTTCTGGAT+AGG - chr7_3:68785314-68785333 None:intergenic 45.0%
TGGTGTTTCTTTCGGTGGAT+CGG - chr7_3:68785355-68785374 None:intergenic 45.0%
GAGATCGGGAGTCAGTTATT+TGG - chr7_3:68785402-68785421 None:intergenic 45.0%
TGGTAATTCTCTGGTCTACC+GGG - chr7_3:68785483-68785502 None:intergenic 45.0%
AAGGAAAAGGCTCAGCTCAA+CGG + chr7_3:68785639-68785658 Msa1119670:intron 45.0%
!! TGTCTTGGTGGATTTGGTGT+CGG - chr7_3:68785849-68785868 None:intergenic 45.0%
! TGATTTGATTGAGGTGGTGG+TGG - chr7_3:68785898-68785917 None:intergenic 45.0%
TGGTGATTTGATTGAGGTGG+TGG - chr7_3:68785901-68785920 None:intergenic 45.0%
TGTAAGGATCGTGGTGGTAA+TGG - chr7_3:68786006-68786025 None:intergenic 45.0%
GTTTGTCGTTGTAAGGATCG+TGG - chr7_3:68786015-68786034 None:intergenic 45.0%
CCTTACAACGACAAACGATC+CGG + chr7_3:68786019-68786038 Msa1119670:intron 45.0%
CTTACAACGACAAACGATCC+GGG + chr7_3:68786020-68786039 Msa1119670:intron 45.0%
CGTTGAAGGAGGATTAATCG+TGG + chr7_3:68786047-68786066 Msa1119670:intron 45.0%
TCTGTGTGATCCAATTTCGG+CGG - chr7_3:68786099-68786118 None:intergenic 45.0%
! TTGTGGTTTTTGTGAGGTGG+TGG - chr7_3:68786158-68786177 None:intergenic 45.0%
! CGATTGTGGTTTTTGTGAGG+TGG - chr7_3:68786161-68786180 None:intergenic 45.0%
ACCAAAGCACAATCCAACAG+CGG + chr7_3:68786303-68786322 Msa1119670:intron 45.0%
ACAGAAACTGGACATGAACC+CGG + chr7_3:68786516-68786535 Msa1119670:intron 45.0%
AAACCGGAGTGAACAGTGAA+CGG + chr7_3:68786575-68786594 Msa1119670:intron 45.0%
GAGTGGTTGGATTTGGATTG+TGG + chr7_3:68786664-68786683 Msa1119670:intron 45.0%
TGTGGGAAGAAAAACGAAGG+AGG + chr7_3:68786682-68786701 Msa1119670:intron 45.0%
GAAAAACGAAGGAGGAAAGG+GGG + chr7_3:68786690-68786709 Msa1119670:intron 45.0%
GAAGTGTAGAGAGAAGTCAG+AGG + chr7_3:68786714-68786733 Msa1119670:intron 45.0%
!! AATGGGTTGGGTAATTGGGT+GGG - chr7_3:68787825-68787844 None:intergenic 45.0%
!! AAATGGGTTGGGTAATTGGG+TGG - chr7_3:68787826-68787845 None:intergenic 45.0%
!!! TTTTTTGGGTGGGTTTGACC+AGG + chr7_3:68787853-68787872 Msa1119670:intron 45.0%
!!! GTGGGTTTGACCAGGTTTTT+TGG + chr7_3:68787861-68787880 Msa1119670:intron 45.0%
TTGGGTCAACCCAAAAAACC+TGG - chr7_3:68787874-68787893 None:intergenic 45.0%
!! ATTAGGGGTGTTCATGGGTT+GGG - chr7_3:68787892-68787911 None:intergenic 45.0%
!! AATTAGGGGTGTTCATGGGT+TGG - chr7_3:68787893-68787912 None:intergenic 45.0%
CGGGTTTGGAGAAAACATCA+TGG + chr7_3:68788338-68788357 Msa1119670:CDS 45.0%
CCGAAAGGTTTGGCCAAGAA+TGG + chr7_3:68784567-68784586 Msa1119670:five_prime_UTR 50.0%
CTACCTCCGTCCCTAATTAG+AGG + chr7_3:68784935-68784954 Msa1119670:intron 50.0%
! AGGTGGTGATGTGTGTTGGT+GGG - chr7_3:68785151-68785170 None:intergenic 50.0%
! TAGGTGGTGATGTGTGTTGG+TGG - chr7_3:68785152-68785171 None:intergenic 50.0%
TTAGTGACGATGGGTGGTTG+TGG - chr7_3:68785217-68785236 None:intergenic 50.0%
!! CAGCTTGGGTGTTGAAGTAC+GGG - chr7_3:68785273-68785292 None:intergenic 50.0%
CTTCGGATGTGGTTCAGCTT+GGG - chr7_3:68785287-68785306 None:intergenic 50.0%
TCTTCGGATGTGGTTCAGCT+TGG - chr7_3:68785288-68785307 None:intergenic 50.0%
GTGGAAGCTGCATCATCTTC+TGG - chr7_3:68785319-68785338 None:intergenic 50.0%
TGTTTCTTTCGGTGGATCGG+AGG - chr7_3:68785352-68785371 None:intergenic 50.0%
GTAATTCTCTGGTCTACCGG+GGG - chr7_3:68785481-68785500 None:intergenic 50.0%
GGTAATTCTCTGGTCTACCG+GGG - chr7_3:68785482-68785501 None:intergenic 50.0%
TTTGCTTCGAGATCGGGAGT+CGG - chr7_3:68785536-68785555 None:intergenic 50.0%
ATTGTGTGTTGGGTTCCGGT+GGG - chr7_3:68785568-68785587 None:intergenic 50.0%
TATTGTGTGTTGGGTTCCGG+TGG - chr7_3:68785569-68785588 None:intergenic 50.0%
AGGAAAAGGCTCAGCTCAAC+GGG + chr7_3:68785640-68785659 Msa1119670:intron 50.0%
AGAGCTAGTGACGACGAACA+AGG + chr7_3:68785715-68785734 Msa1119670:intron 50.0%
AACAAGGACCCGTGTAACAG+AGG + chr7_3:68785731-68785750 Msa1119670:intron 50.0%
!! GAGGAGGTGGGTGTTGATTT+GGG - chr7_3:68785776-68785795 None:intergenic 50.0%
!! TGAGGAGGTGGGTGTTGATT+TGG - chr7_3:68785777-68785796 None:intergenic 50.0%
CGTTGTTTAGGTGAGGAGGT+GGG - chr7_3:68785788-68785807 None:intergenic 50.0%
AGAGCTATTAATGGGGTGGC+TGG - chr7_3:68785811-68785830 None:intergenic 50.0%
!! TGGTGGATTTGGTGTCGGAA+CGG - chr7_3:68785844-68785863 None:intergenic 50.0%
!! TGAGGCTGTCTTGGTGGATT+TGG - chr7_3:68785855-68785874 None:intergenic 50.0%
!! TTTGATTGAGGTGGTGGTGG+TGG - chr7_3:68785895-68785914 None:intergenic 50.0%
!! GTGGTAATGGTTGTTCGCGT+CGG - chr7_3:68785993-68786012 None:intergenic 50.0%
TGTCGTTGTAAGGATCGTGG+TGG - chr7_3:68786012-68786031 None:intergenic 50.0%
CCGGATCGTTTGTCGTTGTA+AGG - chr7_3:68786022-68786041 None:intergenic 50.0%
ATCCTCCTTCAACGAACTCC+CGG - chr7_3:68786041-68786060 None:intergenic 50.0%
ACATCTGCAACCGCCGAAAT+TGG + chr7_3:68786086-68786105 Msa1119670:intron 50.0%
!! TGGTTTTTGTGAGGTGGTGG+TGG - chr7_3:68786155-68786174 None:intergenic 50.0%
GCTGTTGGATTGTGCTTTGG+TGG - chr7_3:68786304-68786323 None:intergenic 50.0%
!! TTGGTTTTCCTCCTTCCTGG+CGG - chr7_3:68786374-68786393 None:intergenic 50.0%
!!! GTGTTGGTTTTCCTCCTTCC+TGG - chr7_3:68786377-68786396 None:intergenic 50.0%
ATTAGGTGGTTTCGGTGGTG+GGG - chr7_3:68786446-68786465 None:intergenic 50.0%
GATTAGGTGGTTTCGGTGGT+GGG - chr7_3:68786447-68786466 None:intergenic 50.0%
!! GGTCACGGATTAGGTGGTTT+CGG - chr7_3:68786454-68786473 None:intergenic 50.0%
!! TGAGATGGTCACGGATTAGG+TGG - chr7_3:68786460-68786479 None:intergenic 50.0%
AGGTGAGATGGTCACGGATT+AGG - chr7_3:68786463-68786482 None:intergenic 50.0%
TCTAGTTGGAGGAGGTGAGA+TGG - chr7_3:68786475-68786494 None:intergenic 50.0%
AGATCAGCCGCAACAGAAAC+TGG + chr7_3:68786504-68786523 Msa1119670:intron 50.0%
TTCGCGTTTCGTTTCGTTGC+CGG - chr7_3:68786538-68786557 None:intergenic 50.0%
GCAACGAAACGAAACGCGAA+TGG + chr7_3:68786538-68786557 Msa1119670:intron 50.0%
GGAGCAAAACGAAGCCAAAC+CGG + chr7_3:68786559-68786578 Msa1119670:intron 50.0%
GTTCACTGTTCACTCCGGTT+TGG - chr7_3:68786576-68786595 None:intergenic 50.0%
TCTCCGTTCACTGTTCACTC+CGG - chr7_3:68786581-68786600 None:intergenic 50.0%
GTGAACGGAGATGCTGAAGA+AGG + chr7_3:68786590-68786609 Msa1119670:intron 50.0%
AACGGAGATGCTGAAGAAGG+TGG + chr7_3:68786593-68786612 Msa1119670:intron 50.0%
AGATGCTGAAGAAGGTGGTG+CGG + chr7_3:68786598-68786617 Msa1119670:intron 50.0%
GATGTAGATTCTAGCAGCGG+TGG - chr7_3:68786642-68786661 None:intergenic 50.0%
GTTGGGTAATTGGGTGGGTA+TGG - chr7_3:68787820-68787839 None:intergenic 50.0%
CCAAACCCGGCTATGAAAAG+AGG - chr7_3:68788327-68788346 None:intergenic 50.0%
! CCTCTTTTCATAGCCGGGTT+TGG + chr7_3:68788324-68788343 Msa1119670:CDS 50.0%
GGTTGACGGAGGAAGAGTTA+AGG - chr7_3:68788714-68788733 None:intergenic 50.0%
TCTTCCTCCGTCAACCAATC+TGG + chr7_3:68788718-68788737 Msa1119670:three_prime_UTR 50.0%
GACCCTCTAATTAGGGACGG+AGG - chr7_3:68784941-68784960 None:intergenic 55.0%
TCCATACCTCACGTCTTGCG+GGG - chr7_3:68785056-68785075 None:intergenic 55.0%
GTCCATACCTCACGTCTTGC+GGG - chr7_3:68785057-68785076 None:intergenic 55.0%
CGTCCATACCTCACGTCTTG+CGG - chr7_3:68785058-68785077 None:intergenic 55.0%
!! TGGGGGTGCTTAGTGACGAT+GGG - chr7_3:68785226-68785245 None:intergenic 55.0%
!! TTGGGGGTGCTTAGTGACGA+TGG - chr7_3:68785227-68785246 None:intergenic 55.0%
GGATAGGAGCTCTTCGGATG+TGG - chr7_3:68785298-68785317 None:intergenic 55.0%
!!! GTGAGGGTGCCCTTCTGTTT+TGG - chr7_3:68785459-68785478 None:intergenic 55.0%
AGCAAAAGTAACCGGCCCAC+CGG + chr7_3:68785550-68785569 Msa1119670:intron 55.0%
TGGAGGCAGCCTCTGTTACA+CGG - chr7_3:68785743-68785762 None:intergenic 55.0%
GTAACAGAGGCTGCCTCCAA+AGG + chr7_3:68785744-68785763 Msa1119670:intron 55.0%
GCGTTGTTTAGGTGAGGAGG+TGG - chr7_3:68785789-68785808 None:intergenic 55.0%
CTGGCGTTGTTTAGGTGAGG+AGG - chr7_3:68785792-68785811 None:intergenic 55.0%
TGGCTGGCGTTGTTTAGGTG+AGG - chr7_3:68785795-68785814 None:intergenic 55.0%
!!! TGGTGGTGGTGGTTTTGCGT+GGG - chr7_3:68785884-68785903 None:intergenic 55.0%
! ACGTCACGTTGTGGAGGTGT+TGG - chr7_3:68785921-68785940 None:intergenic 55.0%
ACACCTCCACAACGTGACGT+CGG + chr7_3:68785921-68785940 Msa1119670:intron 55.0%
! CGTCGGTGGCTGTTTAGGTT+CGG - chr7_3:68785976-68785995 None:intergenic 55.0%
GTAATGGTTGTTCGCGTCGG+TGG - chr7_3:68785990-68786009 None:intergenic 55.0%
ACGATCCGGGAGTTCGTTGA+AGG + chr7_3:68786033-68786052 Msa1119670:intron 55.0%
ATCCGGGAGTTCGTTGAAGG+AGG + chr7_3:68786036-68786055 Msa1119670:intron 55.0%
!! TGGTGGTGTTACGTGGTGGA+GGG - chr7_3:68786138-68786157 None:intergenic 55.0%
! ACGTGGCTGGTCATCGATTG+TGG - chr7_3:68786175-68786194 None:intergenic 55.0%
!!! TTGGGTTTTGGCTACGTGGC+TGG - chr7_3:68786188-68786207 None:intergenic 55.0%
ATTTGGCAGCTGGAGCGGTT+GGG - chr7_3:68786206-68786225 None:intergenic 55.0%
TGGGTGTTCGGTCTCGCATT+TGG - chr7_3:68786223-68786242 None:intergenic 55.0%
! GTGCTTTGGTGGTCGCGTTT+CGG - chr7_3:68786293-68786312 None:intergenic 55.0%
GCCGCTGTTGGATTGTGCTT+TGG - chr7_3:68786307-68786326 None:intergenic 55.0%
ACAATCCAACAGCGGCAGCT+TGG + chr7_3:68786311-68786330 Msa1119670:intron 55.0%
! TTAGGTGGTTTCGGTGGTGG+GGG - chr7_3:68786445-68786464 None:intergenic 55.0%
GGATTAGGTGGTTTCGGTGG+TGG - chr7_3:68786448-68786467 None:intergenic 55.0%
!! CACGGATTAGGTGGTTTCGG+TGG - chr7_3:68786451-68786470 None:intergenic 55.0%
TGGAGGAGGTGAGATGGTCA+CGG - chr7_3:68786469-68786488 None:intergenic 55.0%
TCGCGTTTCGTTTCGTTGCC+GGG - chr7_3:68786537-68786556 None:intergenic 55.0%
AAGAAGGTGGTGCGGAGACA+AGG + chr7_3:68786606-68786625 Msa1119670:intron 55.0%
! AGGACCAGATTGGTTGACGG+AGG - chr7_3:68788725-68788744 None:intergenic 55.0%
TACCTCACGTCTTGCGGGGA+TGG - chr7_3:68785052-68785071 None:intergenic 60.0%
TCCCCGCAAGACGTGAGGTA+TGG + chr7_3:68785052-68785071 Msa1119670:intron 60.0%
GGGTGCTTAGTGACGATGGG+TGG - chr7_3:68785223-68785242 None:intergenic 60.0%
GATCGGAGGTCGAGAGGTTG+TGG - chr7_3:68785338-68785357 None:intergenic 60.0%
GGAGGCAGCCTCTGTTACAC+GGG - chr7_3:68785742-68785761 None:intergenic 60.0%
TGGGGTGGCTGGCGTTGTTT+AGG - chr7_3:68785800-68785819 None:intergenic 60.0%
GGTTCGTGAGGCTGTCTTGG+TGG - chr7_3:68785861-68785880 None:intergenic 60.0%
! GTTTTGCGTGGGGGTTCGTG+AGG - chr7_3:68785873-68785892 None:intergenic 60.0%
!!! GTGGTGGTGGTTTTGCGTGG+GGG - chr7_3:68785882-68785901 None:intergenic 60.0%
!!! GGTGGTGGTGGTTTTGCGTG+GGG - chr7_3:68785883-68785902 None:intergenic 60.0%
!!! GTGGTGGTGGTGGTTTTGCG+TGG - chr7_3:68785885-68785904 None:intergenic 60.0%
CTCCACAACGTGACGTCGGA+GGG + chr7_3:68785925-68785944 Msa1119670:intron 60.0%
TCCACAACGTGACGTCGGAG+GGG + chr7_3:68785926-68785945 Msa1119670:intron 60.0%
! GTTCGCGTCGGTGGCTGTTT+AGG - chr7_3:68785981-68786000 None:intergenic 60.0%
!! TGGTGTTACGTGGTGGAGGG+TGG - chr7_3:68786135-68786154 None:intergenic 60.0%
!! GTGGTGGTGTTACGTGGTGG+AGG - chr7_3:68786139-68786158 None:intergenic 60.0%
!! GTGGTGGTGGTGTTACGTGG+TGG - chr7_3:68786142-68786161 None:intergenic 60.0%
!! GAGGTGGTGGTGGTGTTACG+TGG - chr7_3:68786145-68786164 None:intergenic 60.0%
!!! GCGGTTGGGTTTTGGCTACG+TGG - chr7_3:68786192-68786211 None:intergenic 60.0%
! CAGCTGGAGCGGTTGGGTTT+TGG - chr7_3:68786200-68786219 None:intergenic 60.0%
CATTTGGCAGCTGGAGCGGT+TGG - chr7_3:68786207-68786226 None:intergenic 60.0%
CTCGCATTTGGCAGCTGGAG+CGG - chr7_3:68786211-68786230 None:intergenic 60.0%
TCGGTCTCGCATTTGGCAGC+TGG - chr7_3:68786216-68786235 None:intergenic 60.0%
GCGCTCTGCTGTTGGGTGTT+CGG - chr7_3:68786235-68786254 None:intergenic 60.0%
GCAGTCTGCGCTCTGCTGTT+GGG - chr7_3:68786242-68786261 None:intergenic 60.0%
AGCAGTCTGCGCTCTGCTGT+TGG - chr7_3:68786243-68786262 None:intergenic 60.0%
ACGCTGCTACAACCACCGCA+AGG + chr7_3:68786267-68786286 Msa1119670:intron 60.0%
TGTCACCAAGCTGCCGCTGT+TGG - chr7_3:68786319-68786338 None:intergenic 60.0%
! ACAGAAGCACAACCACCGCC+AGG + chr7_3:68786356-68786375 Msa1119670:intron 60.0%
AAGCACAACCACCGCCAGGA+AGG + chr7_3:68786360-68786379 Msa1119670:intron 60.0%
! GTTTTCCTCCTTCCTGGCGG+TGG - chr7_3:68786371-68786390 None:intergenic 60.0%
CTACCACCACCTCACACCAC+CGG + chr7_3:68786411-68786430 Msa1119670:intron 60.0%
!! TAGGTGGTTTCGGTGGTGGG+GGG - chr7_3:68786444-68786463 None:intergenic 60.0%
TCGGTGGATCGGAGGTCGAG+AGG - chr7_3:68785344-68785363 None:intergenic 65.0%
CTCTGGTCTACCGGGGGTGA+GGG - chr7_3:68785475-68785494 None:intergenic 65.0%
TCTCTGGTCTACCGGGGGTG+AGG - chr7_3:68785476-68785495 None:intergenic 65.0%
TGTGTTGGGTTCCGGTGGGC+CGG - chr7_3:68785564-68785583 None:intergenic 65.0%
GGGGGTTCGTGAGGCTGTCT+TGG - chr7_3:68785864-68785883 None:intergenic 65.0%
CCTCCGACGTCACGTTGTGG+AGG - chr7_3:68785927-68785946 None:intergenic 65.0%
CCTCCACAACGTGACGTCGG+AGG + chr7_3:68785924-68785943 Msa1119670:intron 65.0%
CCACAACGTGACGTCGGAGG+GGG + chr7_3:68785927-68785946 Msa1119670:intron 65.0%
! ACGTGGTGGAGGGTGGTGTG+TGG - chr7_3:68786128-68786147 None:intergenic 65.0%
GTGGTCGCGTTTCGGCCTTG+CGG - chr7_3:68786285-68786304 None:intergenic 65.0%
! GCGGCAGCTTGGTGACAGTC+AGG + chr7_3:68786322-68786341 Msa1119670:intron 65.0%
CACAACCACCGCCAGGAAGG+AGG + chr7_3:68786363-68786382 Msa1119670:intron 65.0%
CGCCATCCCCGCAAGACGTG+AGG + chr7_3:68785047-68785066 Msa1119670:intron 70.0%
!! CAGAAGGGCACCCTCACCCC+CGG + chr7_3:68785462-68785481 Msa1119670:intron 70.0%
CCCCCTCCGACGTCACGTTG+TGG - chr7_3:68785930-68785949 None:intergenic 70.0%
GTCGCGTTTCGGCCTTGCGG+TGG - chr7_3:68786282-68786301 None:intergenic 70.0%
GGTCCGGTGGTGTGAGGTGG+TGG - chr7_3:68786417-68786436 None:intergenic 70.0%
GGTGGTCCGGTGGTGTGAGG+TGG - chr7_3:68786420-68786439 None:intergenic 70.0%
! GGTGGTGGTCCGGTGGTGTG+AGG - chr7_3:68786423-68786442 None:intergenic 70.0%
!! GTTTCGGTGGTGGGGGGTGG+TGG - chr7_3:68786438-68786457 None:intergenic 70.0%
!! GTGGTTTCGGTGGTGGGGGG+TGG - chr7_3:68786441-68786460 None:intergenic 70.0%
!! GGTGGTGGGGGGTGGTGGTC+CGG - chr7_3:68786433-68786452 None:intergenic 75.0%
!! GGTGGGGGGTGGTGGTCCGG+TGG - chr7_3:68786430-68786449 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 68784560 68788763 68784560 ID=Msa1119670;Name=Msa1119670
chr7_3 mRNA 68784560 68788763 68784560 ID=Msa1119670-mRNA-1;Parent=Msa1119670;Name=Msa1119670-mRNA-1;_AED=0.30;_eAED=0.30;_QI=166|1|1|1|1|1|2|302|151
chr7_3 exon 68784560 68784815 68784560 ID=Msa1119670-mRNA-1:exon:17269;Parent=Msa1119670-mRNA-1
chr7_3 exon 68788096 68788763 68788096 ID=Msa1119670-mRNA-1:exon:17270;Parent=Msa1119670-mRNA-1
chr7_3 five_prime_UTR 68784560 68784725 68784560 ID=Msa1119670-mRNA-1:five_prime_utr;Parent=Msa1119670-mRNA-1
chr7_3 CDS 68784726 68784815 68784726 ID=Msa1119670-mRNA-1:cds;Parent=Msa1119670-mRNA-1
chr7_3 CDS 68788096 68788461 68788096 ID=Msa1119670-mRNA-1:cds;Parent=Msa1119670-mRNA-1
chr7_3 three_prime_UTR 68788462 68788763 68788462 ID=Msa1119670-mRNA-1:three_prime_utr;Parent=Msa1119670-mRNA-1
Gene Sequence

>Msa1119670

ATGATGGCATTAACATTTGTTGGCAGAGAAACAACTACCACTTCTTCTCAAGGGGTAATTGCCATGGTACTCAATGAGATGGTCCAAGAGGGTTTGGTTGAAGAAGCAAAATTGGACTTGTTTAATTTGCCTGTATATCATCCTACTATAGAGGAAGTGAAACAAGTGATTGAGGCAGAAGGATCTTTTACCCTTCAAACATTGAAGACTTTTAATATCGGTTGGGATGCAAACCTACAAGAAGATATTGTTGATTATGTTGTCGATAGCAAAATGAGAGGGGAATTCATAGCCAAGTATCACAGGGCTGTTTATGAACCTCTTTTCATAGCCGGGTTTGGAGAAAACATCATGGATGAATTGTTCTCAAGGTTTGCAAATCTGGTTGCACAACTCATTGAGATAGAGACATTGGAGTTTACTAATATTGTATTGTTCATGACCAAGAATCCTTAA

Protein sequence

>Msa1119670

MMALTFVGRETTTTSSQGVIAMVLNEMVQEGLVEEAKLDLFNLPVYHPTIEEVKQVIEAEGSFTLQTLKTFNIGWDANLQEDIVDYVVDSKMRGEFIAKYHRAVYEPLFIAGFGENIMDELFSRFANLVAQLIEIETLEFTNIVLFMTKNP*