AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0047560


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0047560 MtrunA17_Chr7g0274821 97.585 207 5 0 1 207 161 367 7.38e-149 418
Msa0047560 MtrunA17_Chr1g0190011 67.980 203 63 2 1 202 127 328 9.03e-93 274
Msa0047560 MtrunA17_Chr1g0179461 52.000 100 44 2 1 96 163 262 1.66e-25 101
Msa0047560 MtrunA17_Chr5g0397551 41.317 167 75 7 1 145 152 317 4.89e-25 99.8
Msa0047560 MtrunA17_Chr8g0351761 37.255 204 98 7 1 186 160 351 1.37e-24 99.0
Msa0047560 MtrunA17_Chr7g0245841 56.190 105 43 1 1 102 145 249 5.11e-24 97.1
Msa0047560 MtrunA17_Chr1g0188211 54.455 101 41 2 1 96 149 249 4.78e-23 94.7
Msa0047560 MtrunA17_Chr6g0476061 46.602 103 52 1 1 100 148 250 1.06e-21 90.5
Msa0047560 MtrunA17_Chr8g0386741 39.552 134 69 5 1 123 184 316 4.63e-20 86.7
Msa0047560 MtrunA17_Chr4g0054661 46.535 101 50 2 1 98 160 259 4.74e-20 86.3
Msa0047560 MtrunA17_Chr7g0247431 43.220 118 58 2 1 109 175 292 1.89e-19 84.7
Msa0047560 MtrunA17_Chr8g0349091 50.000 110 47 2 1 102 173 282 8.04e-19 83.2
Msa0047560 MtrunA17_Chr5g0398621 43.689 103 51 2 1 96 115 217 1.04e-18 81.3
Msa0047560 MtrunA17_Chr1g0168121 46.809 94 50 0 2 95 88 181 8.91e-18 79.3
Msa0047560 MtrunA17_Chr4g0056761 50.943 106 48 1 1 102 162 267 2.64e-17 78.6
Msa0047560 MtrunA17_Chr4g0027371 46.739 92 40 2 11 95 48 137 8.72e-17 76.3
Msa0047560 MtrunA17_Chr4g0027351 46.914 81 42 1 11 90 48 128 1.85e-16 72.8
Msa0047560 MtrunA17_Chr1g0190051 48.421 95 49 0 1 95 119 213 5.28e-16 74.7
Msa0047560 MtrunA17_Chr3g0112131 45.055 91 49 1 5 95 129 218 1.39e-15 73.6
Msa0047560 MtrunA17_Chr3g0133051 36.735 98 58 2 2 95 120 217 7.58e-15 71.6
Msa0047560 MtrunA17_Chr4g0027331 44.048 84 42 2 11 89 48 131 1.49e-14 67.8
Msa0047560 MtrunA17_Chr3g0086021 34.118 170 93 4 10 165 136 300 1.85e-14 70.5
Msa0047560 MtrunA17_Chr8g0351651 40.860 93 55 0 3 95 133 225 1.89e-14 70.5
Msa0047560 MtrunA17_Chr5g0427311 34.021 97 61 2 2 95 99 195 1.37e-13 67.4
Msa0047560 MtrunA17_Chr7g0250031 45.055 91 49 1 5 95 107 196 2.31e-13 67.0
Msa0047560 MtrunA17_Chr5g0398531 39.785 93 56 0 3 95 147 239 2.95e-13 67.4
Msa0047560 MtrunA17_Chr5g0417581 34.483 145 69 4 8 129 45 186 3.59e-13 65.5
Msa0047560 MtrunA17_Chr6g0476241 44.706 85 46 1 11 95 204 287 4.39e-13 66.6
Msa0047560 MtrunA17_Chr4g0054651 43.956 91 50 1 5 95 126 215 1.19e-12 65.5
Msa0047560 MtrunA17_Chr4g0027301 41.667 96 46 3 3 90 46 139 3.53e-11 58.9
Msa0047560 MtrunA17_Chr5g0443311 37.500 96 60 0 1 96 96 191 4.84e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0047560 AT3G04590.2 52.212 226 86 8 1 207 189 411 1.73e-60 194
Msa0047560 AT3G04590.1 66.372 113 37 1 1 112 189 301 5.78e-45 152
Msa0047560 AT5G28590.1 47.208 197 63 7 3 189 50 215 9.50e-39 133
Msa0047560 AT4G12080.1 43.312 157 80 4 1 151 188 341 1.92e-32 120
Msa0047560 AT4G25320.1 57.576 99 39 1 1 96 184 282 2.00e-31 118
Msa0047560 AT5G51590.1 54.545 99 42 1 1 96 196 294 8.47e-28 108
Msa0047560 AT5G62260.1 47.748 111 55 1 1 108 178 288 4.11e-27 107
Msa0047560 AT5G62260.3 47.748 111 55 1 1 108 178 288 4.11e-27 107
Msa0047560 AT2G33620.1 53.684 95 41 1 11 102 191 285 6.40e-27 105
Msa0047560 AT2G33620.4 53.684 95 41 1 11 102 191 285 6.40e-27 105
Msa0047560 AT2G33620.2 53.684 95 41 1 11 102 191 285 6.40e-27 105
Msa0047560 AT2G33620.3 53.684 95 41 1 11 102 191 285 6.40e-27 105
Msa0047560 AT2G45850.1 50.467 107 50 1 1 104 180 286 9.46e-27 105
Msa0047560 AT2G45850.2 50.467 107 50 1 1 104 180 286 9.46e-27 105
Msa0047560 AT5G62260.2 53.763 93 40 1 1 90 178 270 5.57e-25 99.4
Msa0047560 AT4G17950.1 42.537 134 68 3 1 129 239 368 1.46e-24 100
Msa0047560 AT2G45850.3 50.000 98 46 1 1 95 180 277 5.45e-24 96.3
Msa0047560 AT4G00200.2 52.381 105 47 1 1 102 141 245 1.79e-22 93.2
Msa0047560 AT4G00200.1 52.381 105 47 1 1 102 141 245 1.79e-22 93.2
Msa0047560 AT1G63470.1 48.485 99 47 2 1 96 195 292 4.95e-22 92.8
Msa0047560 AT5G46640.1 46.212 132 66 2 1 129 198 327 1.64e-20 88.6
Msa0047560 AT4G22770.2 49.495 99 47 1 1 96 168 266 4.74e-20 86.7
Msa0047560 AT4G22770.1 49.495 99 47 1 1 96 168 266 4.74e-20 86.7
Msa0047560 AT3G61310.1 51.515 99 45 1 1 96 182 280 5.42e-20 86.7
Msa0047560 AT1G63480.5 39.623 159 78 5 1 143 172 328 6.17e-20 86.7
Msa0047560 AT1G63480.7 39.623 159 78 5 1 143 172 328 6.17e-20 86.7
Msa0047560 AT1G63480.4 39.623 159 78 5 1 143 172 328 6.17e-20 86.7
Msa0047560 AT1G63480.3 39.623 159 78 5 1 143 172 328 6.17e-20 86.7
Msa0047560 AT1G63480.6 39.623 159 78 5 1 143 172 328 6.17e-20 86.7
Msa0047560 AT1G63480.2 39.623 159 78 5 1 143 178 334 6.31e-20 86.7
Msa0047560 AT1G63480.1 39.623 159 78 5 1 143 178 334 6.31e-20 86.7
Msa0047560 AT3G60870.1 37.634 93 56 1 3 95 106 196 5.98e-16 74.7
Msa0047560 AT5G49700.1 36.634 101 57 2 2 95 102 202 2.03e-14 70.5
Msa0047560 AT1G76500.1 42.553 94 45 1 11 95 127 220 3.19e-14 70.1
Msa0047560 AT4G14465.1 42.553 94 54 0 2 95 113 206 2.06e-13 67.8
Msa0047560 AT4G12050.1 40.426 94 55 1 3 95 165 258 3.61e-12 64.7
Msa0047560 AT3G04570.1 39.604 101 53 1 3 95 127 227 1.21e-11 63.2
Msa0047560 AT4G22810.1 39.583 96 55 1 3 95 152 247 1.26e-11 63.2
Msa0047560 AT4G17800.1 40.659 91 53 1 5 95 132 221 3.81e-11 61.6
Msa0047560 AT2G45430.1 37.113 97 57 1 3 95 136 232 6.05e-11 60.8
Msa0047560 AT3G55560.1 43.023 86 48 1 11 95 143 228 7.83e-11 60.5

Find 110 sgRNAs with CRISPR-Local

Find 204 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGATATCATTTCGCTTAC+TGG 0.137983 1_1:-80506572 Msa0047560:CDS
GAACTGGACCAGCAGCTTTA+AGG 0.151788 1_1:+80506450 None:intergenic
TGCAATTTATGCAACAAAAT+AGG 0.176992 1_1:-80507539 Msa0047560:CDS
GCAATTTATGCAACAAAATA+GGG 0.199709 1_1:-80507538 Msa0047560:CDS
TGTTTGCCATTTATCCAATT+TGG 0.215375 1_1:-80507638 Msa0047560:five_prime_UTR
TGAAAACCAAATTGGATAAA+TGG 0.235670 1_1:+80507632 None:intergenic
CAAATTCTCAATCAGGAATT+TGG 0.241504 1_1:+80505571 None:intergenic
CGGATGGCGCATACTATAAA+TGG 0.259174 1_1:+80505462 None:intergenic
CTCCGTCAACCAGCATCTTC+AGG 0.315212 1_1:-80507468 Msa0047560:CDS
TACCTATACCATGATAAATA+AGG 0.371169 1_1:-80505293 Msa0047560:three_prime_UTR
TATATTTCCCTTCCGTTTCA+AGG 0.373603 1_1:-80505226 Msa0047560:three_prime_UTR
TGCTTCCTAGCTTAGTTTGT+GGG 0.376035 1_1:-80505250 Msa0047560:three_prime_UTR
CTCAATATTGCAGGAAGAAC+AGG 0.378174 1_1:-80505633 Msa0047560:intron
AACTGGACCAGCAGCTTTAA+GGG 0.379611 1_1:+80506451 None:intergenic
TACCTTATTTATCATGGTAT+AGG 0.382820 1_1:+80505291 None:intergenic
CCTTCTAAGATTACCTGAAC+TGG 0.384145 1_1:+80506434 None:intergenic
TATTTGAGTATGCATTCAAT+AGG 0.386149 1_1:-80507580 Msa0047560:five_prime_UTR
TAACCAGCATGTCTTGAATC+TGG 0.387032 1_1:+80505742 None:intergenic
CGCTGGAAGAGTCGACTGTT+TGG 0.391063 1_1:+80505878 None:intergenic
GGCGAGCCAGCATCAAGTTT+AGG 0.392871 1_1:-80505907 Msa0047560:CDS
TAAAGCTGCTGGTCCAGTTC+AGG 0.403368 1_1:-80506447 Msa0047560:intron
TGTTCATCATTTCCTCGGAT+TGG 0.407349 1_1:+80505850 None:intergenic
GCCATCTCAAATTCTCAATC+AGG 0.415987 1_1:+80505564 None:intergenic
GACACTAGTGCTGGTGGAAA+AGG 0.420179 1_1:-80505964 Msa0047560:CDS
CTTGATGCTGGCTCGCCAAC+TGG 0.422763 1_1:+80505913 None:intergenic
TTCGCCCTCCGGTTTCATTA+CGG 0.428138 1_1:+80506540 None:intergenic
GGTGGGCCCCTTAAAGCTGC+TGG 0.437762 1_1:-80506458 Msa0047560:CDS
TCCTATGTCCGTAATGAAAC+CGG 0.439359 1_1:-80506548 Msa0047560:CDS
CAAGTTGTTGAATCATGTAA+TGG 0.441011 1_1:+80505809 None:intergenic
TATACCTACCTTATTTATCA+TGG 0.447415 1_1:+80505285 None:intergenic
GTCAGAAGCCACGACCTTAA+CGG 0.450596 1_1:+80505442 None:intergenic
ATGCTTCCTAGCTTAGTTTG+TGG 0.457545 1_1:-80505251 Msa0047560:three_prime_UTR
ATAGTATGCGCCATCCGTTA+AGG 0.460483 1_1:-80505456 Msa0047560:three_prime_UTR
AATTCTGATGGACAAATCAT+AGG 0.463502 1_1:-80506491 Msa0047560:CDS
TGGTCATAGCCTCCATTCTC+GGG 0.466277 1_1:+80505591 None:intergenic
GGTTCGATGGCACCAATGTC+TGG 0.467018 1_1:-80505536 Msa0047560:three_prime_UTR
GAGAATTTGAGATGGCTTGT+GGG 0.469001 1_1:-80505557 Msa0047560:three_prime_UTR
TCTCACCAGTCTCCCGAGAA+TGG 0.469905 1_1:-80505603 Msa0047560:CDS
AGCCTCCATTCTCGGGAGAC+TGG 0.470077 1_1:+80505598 None:intergenic
ATCATAGGTGGTGGTGTTGG+TGG 0.470575 1_1:-80506476 Msa0047560:CDS
TATGCATTCAATAGGATGTT+GGG 0.475179 1_1:-80507572 Msa0047560:five_prime_UTR
TTGGTCATAGCCTCCATTCT+CGG 0.475797 1_1:+80505590 None:intergenic
CATTACATGATTCAACAACT+TGG 0.485575 1_1:-80505808 Msa0047560:CDS
CTTGATGTTCATCATTTCCT+CGG 0.490079 1_1:+80505845 None:intergenic
CTCCTGAAGATGCTGGTTGA+CGG 0.496465 1_1:+80507466 None:intergenic
ATATGCATTATGTCTGCATC+TGG 0.497917 1_1:-80507510 Msa0047560:CDS
GCTGGCTCGCCAACTGGTGA+TGG 0.498545 1_1:+80505919 None:intergenic
AAGACCACCACTTCGCCCTC+CGG 0.498681 1_1:+80506529 None:intergenic
ACCTCCCAGGTCTACAGAGT+GGG 0.499164 1_1:-80505773 Msa0047560:CDS
AAATGATGAACATCAAGCTA+TGG 0.500826 1_1:-80505839 Msa0047560:CDS
TAGTCAAACACCGTTGATGC+AGG 0.514341 1_1:+80507666 None:intergenic
TGCGCCATCCGTTAAGGTCG+TGG 0.515945 1_1:-80505450 Msa0047560:three_prime_UTR
AGGAGGCAACATTATGTATG+AGG 0.516281 1_1:-80507448 Msa0047560:intron
AAATACATCACAAGTAAATG+AGG 0.517819 1_1:+80505373 None:intergenic
TATAGCCCACAAACTAAGCT+AGG 0.521819 1_1:+80505245 None:intergenic
GTTTGCACGTGACACCTCCC+AGG 0.535717 1_1:-80505786 Msa0047560:CDS
TCCGGTTTCATTACGGACAT+AGG 0.536430 1_1:+80506547 None:intergenic
GTATGCATTCAATAGGATGT+TGG 0.536594 1_1:-80507573 Msa0047560:five_prime_UTR
CACTGGACTTCATACCTGAC+AGG 0.545872 1_1:+80505716 None:intergenic
TCATAGGTGGTGGTGTTGGT+GGG 0.546536 1_1:-80506475 Msa0047560:CDS
CATCCAGATTCAAGACATGC+TGG 0.548607 1_1:-80505745 Msa0047560:CDS
CAAATCATAGGTGGTGGTGT+TGG 0.550092 1_1:-80506479 Msa0047560:CDS
ATGGAGCAAGCACCTTGAAA+CGG 0.550654 1_1:+80505214 None:intergenic
CATGCTGGTTATGACCTGTC+AGG 0.555450 1_1:-80505730 Msa0047560:intron
AGCAAGCACCTTGAAACGGA+AGG 0.556073 1_1:+80505218 None:intergenic
GTATGCTTGTCTAATTCTGA+TGG 0.561947 1_1:-80506503 Msa0047560:CDS
TGAGAATTTGAGATGGCTTG+TGG 0.563343 1_1:-80505558 Msa0047560:three_prime_UTR
TCCTCGGATTGGATTCCCGC+TGG 0.565035 1_1:+80505861 None:intergenic
ATTGCAGGAAGAACAGGTCA+TGG 0.575958 1_1:-80505627 Msa0047560:intron
ACGGAGAGAGGCATTAGAGA+TGG 0.577094 1_1:+80507485 None:intergenic
CACCTCGTGACAAAGACTGC+TGG 0.581481 1_1:+80505485 None:intergenic
AATGATGAACATCAAGCTAT+GGG 0.582749 1_1:-80505838 Msa0047560:CDS
GGAAAAGGTGATCCCTCTGC+TGG 0.584167 1_1:-80505949 Msa0047560:CDS
TCCTGATTGAGAATTTGAGA+TGG 0.587653 1_1:-80505565 Msa0047560:exon
AACAAGAAGGACACTAGTGC+TGG 0.587899 1_1:-80505973 Msa0047560:CDS
TGGAAGAGTCGACTGTTTGG+TGG 0.588873 1_1:+80505881 None:intergenic
GAGATGGCTTGTGGGTTCGA+TGG 0.589349 1_1:-80505549 Msa0047560:three_prime_UTR
TAATCCCTACAGGTCATTGT+CGG 0.592613 1_1:-80506012 Msa0047560:intron
TGGAAACCTAAACTTGATGC+TGG 0.602657 1_1:+80505901 None:intergenic
GAAACCGGAGGGCGAAGTGG+TGG 0.603275 1_1:-80506533 Msa0047560:CDS
CAATTTATGCAACAAAATAG+GGG 0.604932 1_1:-80507537 Msa0047560:CDS
AAGAAGGACACTAGTGCTGG+TGG 0.607696 1_1:-80505970 Msa0047560:CDS
AGATGCTGGTTGACGGAGAG+AGG 0.610130 1_1:+80507473 None:intergenic
TACAACTGTTAACCAGACAT+TGG 0.620305 1_1:+80505524 None:intergenic
TTGCAGGAAGAACAGGTCAT+GGG 0.620825 1_1:-80505626 Msa0047560:intron
CAAAGACTGCTGGTATGTAG+TGG 0.621373 1_1:+80505495 None:intergenic
AATGAAACCGGAGGGCGAAG+TGG 0.622641 1_1:-80506536 Msa0047560:CDS
AAACAGTCGACTCTTCCAGC+GGG 0.624900 1_1:-80505876 Msa0047560:CDS
GATGAACATCAAGCTATGGG+TGG 0.627293 1_1:-80505835 Msa0047560:CDS
CACCTCCCAGGTCTACAGAG+TGG 0.633953 1_1:-80505774 Msa0047560:CDS
GCAAGCACCTTGAAACGGAA+GGG 0.638256 1_1:+80505219 None:intergenic
ATGTTGCCTCCTGAAGATGC+TGG 0.639283 1_1:+80507459 None:intergenic
TGATGGCAACTTACCAGCAG+AGG 0.643200 1_1:+80505936 None:intergenic
GGTAAGTTGCCATCACCAGT+TGG 0.643376 1_1:-80505928 Msa0047560:CDS
ACTGGACCAGCAGCTTTAAG+GGG 0.646372 1_1:+80506452 None:intergenic
GATGGCAACTTACCAGCAGA+GGG 0.646608 1_1:+80505937 None:intergenic
TATACCATGATAAATAAGGT+AGG 0.647891 1_1:-80505289 Msa0047560:three_prime_UTR
CACCAGTCTCCCGAGAATGG+AGG 0.648200 1_1:-80505600 Msa0047560:CDS
CCTCCCAGGTCTACAGAGTG+GGG 0.652955 1_1:-80505772 Msa0047560:CDS
GAAGCCACGACCTTAACGGA+TGG 0.655831 1_1:+80505446 None:intergenic
TCTGATGGACAAATCATAGG+TGG 0.664275 1_1:-80506488 Msa0047560:CDS
TCCAGCGGGAATCCAATCCG+AGG 0.670950 1_1:-80505862 Msa0047560:CDS
GATGGACAAATCATAGGTGG+TGG 0.676431 1_1:-80506485 Msa0047560:CDS
ATGTCCGTAATGAAACCGGA+GGG 0.676572 1_1:-80506544 Msa0047560:CDS
CGTCAACCAGCATCTTCAGG+AGG 0.676685 1_1:-80507465 Msa0047560:CDS
TATGTCCGTAATGAAACCGG+AGG 0.677990 1_1:-80506545 Msa0047560:CDS
CTCCCAGGTCTACAGAGTGG+GGG 0.684142 1_1:-80505771 Msa0047560:CDS
CAAACAGTCGACTCTTCCAG+CGG 0.690163 1_1:-80505877 Msa0047560:CDS
TACCAGCAGTCTTTGTCACG+AGG 0.704449 1_1:-80505487 Msa0047560:three_prime_UTR
CCCCACTCTGTAGACCTGGG+AGG 0.709027 1_1:+80505772 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTCAAAGTAATATAAAT+AGG + chr1_1:80505641-80505660 None:intergenic 10.0%
!! AAGAGAAAAATAAAAAAATA+TGG + chr1_1:80505882-80505901 None:intergenic 10.0%
!! TGTTATAAATATAGATATTT+CGG - chr1_1:80506760-80506779 Msa0047560:intron 10.0%
!! AAAAATAAAAAAATATGGAC+GGG + chr1_1:80505877-80505896 None:intergenic 15.0%
!! GAAAAATAAAAAAATATGGA+CGG + chr1_1:80505878-80505897 None:intergenic 15.0%
!!! GTTGATCTTTTTAATTTTTT+AGG - chr1_1:80506229-80506248 Msa0047560:intron 15.0%
!! ATTTATCAAAAATAACTTCT+TGG + chr1_1:80506862-80506881 None:intergenic 15.0%
!! GATGTATTTAAAAATTAGAA+TGG - chr1_1:80507538-80507557 Msa0047560:CDS 15.0%
!! TAAAATGTAAAGATAAACCT+TGG + chr1_1:80505737-80505756 None:intergenic 20.0%
!! AAAATAAAAAAATATGGACG+GGG + chr1_1:80505876-80505895 None:intergenic 20.0%
!! GAAATATTCTTATAAGAAGT+GGG + chr1_1:80506062-80506081 None:intergenic 20.0%
!! AGAAATATTCTTATAAGAAG+TGG + chr1_1:80506063-80506082 None:intergenic 20.0%
!! AAATTGTGTCTATATTAGAT+TGG - chr1_1:80506118-80506137 Msa0047560:intron 20.0%
!!! AATTTTTTAGGTGTATGATT+TGG - chr1_1:80506241-80506260 Msa0047560:intron 20.0%
!! TATTTAAAAATTAGAATGGC+TGG - chr1_1:80507542-80507561 Msa0047560:CDS 20.0%
! TGAAAACCAAATTGGATAAA+TGG + chr1_1:80505268-80505287 None:intergenic 25.0%
! GAAAAAGATGAAAACCAAAT+TGG + chr1_1:80505276-80505295 None:intergenic 25.0%
! TATTTGAGTATGCATTCAAT+AGG - chr1_1:80505317-80505336 Msa0047560:three_prime_UTR 25.0%
! TGCAATTTATGCAACAAAAT+AGG - chr1_1:80505358-80505377 Msa0047560:three_prime_UTR 25.0%
! GCAATTTATGCAACAAAATA+GGG - chr1_1:80505359-80505378 Msa0047560:three_prime_UTR 25.0%
! CAATTTATGCAACAAAATAG+GGG - chr1_1:80505360-80505379 Msa0047560:three_prime_UTR 25.0%
! TGAAGATTGTTTGAAGAATA+GGG + chr1_1:80505541-80505560 None:intergenic 25.0%
! TTGAAGATTGTTTGAAGAAT+AGG + chr1_1:80505542-80505561 None:intergenic 25.0%
! TTCTTCAAACAATCTTCAAA+AGG - chr1_1:80505543-80505562 Msa0047560:three_prime_UTR 25.0%
! AAACAATCTTCAAAAGGAAA+CGG - chr1_1:80505549-80505568 Msa0047560:three_prime_UTR 25.0%
!! TTATCTTTACATTTTACCCA+TGG - chr1_1:80505741-80505760 Msa0047560:CDS 25.0%
!! CTAACCAAAAAAACTTTTTG+TGG - chr1_1:80505990-80506009 Msa0047560:CDS 25.0%
!!! TTGACCACAAAAAGTTTTTT+TGG + chr1_1:80505997-80506016 None:intergenic 25.0%
! TTAATAAAAACACTGTACTG+CGG - chr1_1:80506197-80506216 Msa0047560:intron 25.0%
! TTCTTTAATGCTTTGATATC+AGG - chr1_1:80506297-80506316 Msa0047560:intron 25.0%
! TCTTTAATGCTTTGATATCA+GGG - chr1_1:80506298-80506317 Msa0047560:intron 25.0%
! TGTGAATGTAATTCATTATC+AGG + chr1_1:80506839-80506858 None:intergenic 25.0%
!!! ATTTTTTATGGACAACAAGA+AGG - chr1_1:80506911-80506930 Msa0047560:intron 25.0%
! TTATACCATAAGAAAATCAG+TGG + chr1_1:80507225-80507244 None:intergenic 25.0%
!! AGGCAAAACAATATTTTTCA+AGG + chr1_1:80507507-80507526 None:intergenic 25.0%
! AAATACATCACAAGTAAATG+AGG + chr1_1:80507527-80507546 None:intergenic 25.0%
! TACCTATACCATGATAAATA+AGG - chr1_1:80507604-80507623 Msa0047560:five_prime_UTR 25.0%
!! TACCTTATTTATCATGGTAT+AGG + chr1_1:80507609-80507628 None:intergenic 25.0%
! TATACCATGATAAATAAGGT+AGG - chr1_1:80507608-80507627 Msa0047560:five_prime_UTR 25.0%
!! TATACCTACCTTATTTATCA+TGG + chr1_1:80507615-80507634 None:intergenic 25.0%
! TGTTTGCCATTTATCCAATT+TGG - chr1_1:80505259-80505278 Msa0047560:three_prime_UTR 30.0%
TATGCATTCAATAGGATGTT+GGG - chr1_1:80505325-80505344 Msa0047560:three_prime_UTR 30.0%
ATAAATAGGAATATGAGCCT+TGG + chr1_1:80505627-80505646 None:intergenic 30.0%
TACTTGTGTTAAAGAAACCA+AGG - chr1_1:80505717-80505736 Msa0047560:intron 30.0%
TAGCATATTCAATCAACATG+TGG + chr1_1:80505792-80505811 None:intergenic 30.0%
! AAACTTTTTGTGGTCAAATC+TGG - chr1_1:80506000-80506019 Msa0047560:CDS 30.0%
! AGAATATTTCTACCTTCAAG+AGG - chr1_1:80506072-80506091 Msa0047560:intron 30.0%
TTTGATATCATTTCGCTTAC+TGG - chr1_1:80506325-80506344 Msa0047560:intron 30.0%
! AATTCTGATGGACAAATCAT+AGG - chr1_1:80506406-80506425 Msa0047560:intron 30.0%
TTTACCTTGTGAATATTGAG+CGG - chr1_1:80506538-80506557 Msa0047560:CDS 30.0%
ACAGAAACTACAAAAGAAAC+AGG + chr1_1:80506581-80506600 None:intergenic 30.0%
! TTTCTGTTATAGCCTTTTTC+TGG - chr1_1:80506594-80506613 Msa0047560:intron 30.0%
!!! TTTTTTGTTCTGCCAGAAAA+AGG + chr1_1:80506609-80506628 None:intergenic 30.0%
AAATCAACTTCTGCCAAAAA+AGG - chr1_1:80506650-80506669 Msa0047560:intron 30.0%
AATCAACTTCTGCCAAAAAA+GGG - chr1_1:80506651-80506670 Msa0047560:intron 30.0%
TAACTATGTAGTGAAATCAG+TGG - chr1_1:80506704-80506723 Msa0047560:intron 30.0%
GAATGTAATTCATTATCAGG+TGG + chr1_1:80506836-80506855 None:intergenic 30.0%
GATAAATAGTTAATCCCTAC+AGG - chr1_1:80506875-80506894 Msa0047560:intron 30.0%
!!! CATTGTCGGTACATTTTTTA+TGG - chr1_1:80506899-80506918 Msa0047560:intron 30.0%
AAATGATGAACATCAAGCTA+TGG - chr1_1:80507058-80507077 Msa0047560:intron 30.0%
AATGATGAACATCAAGCTAT+GGG - chr1_1:80507059-80507078 Msa0047560:intron 30.0%
CAAGTTGTTGAATCATGTAA+TGG + chr1_1:80507091-80507110 None:intergenic 30.0%
CATTACATGATTCAACAACT+TGG - chr1_1:80507089-80507108 Msa0047560:intron 30.0%
CAAATTCTCAATCAGGAATT+TGG + chr1_1:80507329-80507348 None:intergenic 30.0%
!! TAATGCCTCTTCATTTTTGT+GGG - chr1_1:80507572-80507591 Msa0047560:five_prime_UTR 30.0%
! TGTGAATTTTCCTGCATCAA+CGG - chr1_1:80505221-80505240 Msa0047560:three_prime_UTR 35.0%
GTATGCATTCAATAGGATGT+TGG - chr1_1:80505324-80505343 Msa0047560:three_prime_UTR 35.0%
ATATGCATTATGTCTGCATC+TGG - chr1_1:80505387-80505406 Msa0047560:three_prime_UTR 35.0%
GTTGAGTGTTATCATAACCA+AGG - chr1_1:80505607-80505626 Msa0047560:CDS 35.0%
! TTTTCTCTTGTCGTAGAATC+AGG - chr1_1:80505680-80505699 Msa0047560:intron 35.0%
CAGTGGTAATAATGGCTTAT+GGG - chr1_1:80506162-80506181 Msa0047560:intron 35.0%
TAATGCTTTGATATCAGGGT+CGG - chr1_1:80506302-80506321 Msa0047560:intron 35.0%
GTATGCTTGTCTAATTCTGA+TGG - chr1_1:80506394-80506413 Msa0047560:intron 35.0%
GGAACTGCAAATGAATTTGT+AGG - chr1_1:80506484-80506503 Msa0047560:CDS 35.0%
CTGCAAATGAATTTGTAGGT+TGG - chr1_1:80506488-80506507 Msa0047560:CDS 35.0%
GTAAAACAAATGCAAGACAG+CGG + chr1_1:80506523-80506542 None:intergenic 35.0%
ATCAACTTCTGCCAAAAAAG+GGG - chr1_1:80506652-80506671 Msa0047560:intron 35.0%
AAATCAGTGGAATGAAAAGC+AGG - chr1_1:80506717-80506736 Msa0047560:intron 35.0%
AATCAGTGGAATGAAAAGCA+GGG - chr1_1:80506718-80506737 Msa0047560:intron 35.0%
CTTGATGTTCATCATTTCCT+CGG + chr1_1:80507055-80507074 None:intergenic 35.0%
ATAAGAAAATCAGTGGAGGA+TGG + chr1_1:80507218-80507237 None:intergenic 35.0%
!!! ATCCTCCACTGATTTTCTTA+TGG - chr1_1:80507217-80507236 Msa0047560:intron 35.0%
TACCATAAGAAAATCAGTGG+AGG + chr1_1:80507222-80507241 None:intergenic 35.0%
TCCTGATTGAGAATTTGAGA+TGG - chr1_1:80507332-80507351 Msa0047560:intron 35.0%
TACAACTGTTAACCAGACAT+TGG + chr1_1:80507376-80507395 None:intergenic 35.0%
!! CTAATGCCTCTTCATTTTTG+TGG - chr1_1:80507571-80507590 Msa0047560:five_prime_UTR 35.0%
TATATTTCCCTTCCGTTTCA+AGG - chr1_1:80507671-80507690 Msa0047560:five_prime_UTR 35.0%
AGGAGGCAACATTATGTATG+AGG - chr1_1:80505449-80505468 Msa0047560:three_prime_UTR 40.0%
CTGTTGAAACTTGCAGCATA+TGG - chr1_1:80505574-80505593 Msa0047560:exon 40.0%
TACCCATGGTGTTCCAAAAA+AGG - chr1_1:80505755-80505774 Msa0047560:CDS 40.0%
!!! TGCCTTTTTTGGAACACCAT+GGG + chr1_1:80505760-80505779 None:intergenic 40.0%
TTTGTGGTCAAATCTGGATG+TGG - chr1_1:80506006-80506025 Msa0047560:intron 40.0%
TCAAATCTGGATGTGGATGT+TGG - chr1_1:80506013-80506032 Msa0047560:intron 40.0%
TTAATGTTAGTGCGTAGCAG+TGG - chr1_1:80506145-80506164 Msa0047560:intron 40.0%
GCAGTGGTAATAATGGCTTA+TGG - chr1_1:80506161-80506180 Msa0047560:intron 40.0%
TCCTATGTCCGTAATGAAAC+CGG - chr1_1:80506349-80506368 Msa0047560:intron 40.0%
! TCTGATGGACAAATCATAGG+TGG - chr1_1:80506409-80506428 Msa0047560:intron 40.0%
!! CCTTCTAAGATTACCTGAAC+TGG + chr1_1:80506466-80506485 None:intergenic 40.0%
CCAGTTCAGGTAATCTTAGA+AGG - chr1_1:80506463-80506482 Msa0047560:CDS 40.0%
AGAACCGCTCAATATTCACA+AGG + chr1_1:80506545-80506564 None:intergenic 40.0%
TCAACTTCTGCCAAAAAAGG+GGG - chr1_1:80506653-80506672 Msa0047560:intron 40.0%
AAAAAAGGGGGAAATGAGGT+GGG - chr1_1:80506665-80506684 Msa0047560:intron 40.0%
ATTCATTATCAGGTGGTGCT+TGG + chr1_1:80506829-80506848 None:intergenic 40.0%
TAATCCCTACAGGTCATTGT+CGG - chr1_1:80506885-80506904 Msa0047560:intron 40.0%
TGGAAACCTAAACTTGATGC+TGG + chr1_1:80506999-80507018 None:intergenic 40.0%
TGTTCATCATTTCCTCGGAT+TGG + chr1_1:80507050-80507069 None:intergenic 40.0%
TAACCAGCATGTCTTGAATC+TGG + chr1_1:80507158-80507177 None:intergenic 40.0%
! GGTATGAAGTCCAGTGATTT+TGG - chr1_1:80507188-80507207 Msa0047560:intron 40.0%
GGATGGTATACCAAAATCAC+TGG + chr1_1:80507201-80507220 None:intergenic 40.0%
AGCGAAGTTCTCAATATTGC+AGG - chr1_1:80507255-80507274 Msa0047560:intron 40.0%
CTCAATATTGCAGGAAGAAC+AGG - chr1_1:80507264-80507283 Msa0047560:intron 40.0%
GCCATCTCAAATTCTCAATC+AGG + chr1_1:80507336-80507355 None:intergenic 40.0%
! TGAGAATTTGAGATGGCTTG+TGG - chr1_1:80507339-80507358 Msa0047560:intron 40.0%
! GAGAATTTGAGATGGCTTGT+GGG - chr1_1:80507340-80507359 Msa0047560:intron 40.0%
ACAGACCCACAAAAATGAAG+AGG + chr1_1:80507580-80507599 None:intergenic 40.0%
! ATGCTTCCTAGCTTAGTTTG+TGG - chr1_1:80507646-80507665 Msa0047560:five_prime_UTR 40.0%
!! TGCTTCCTAGCTTAGTTTGT+GGG - chr1_1:80507647-80507666 Msa0047560:five_prime_UTR 40.0%
TATAGCCCACAAACTAAGCT+AGG + chr1_1:80507655-80507674 None:intergenic 40.0%
TAGTCAAACACCGTTGATGC+AGG + chr1_1:80505234-80505253 None:intergenic 45.0%
!!! GTGCCTTTTTTGGAACACCA+TGG + chr1_1:80505761-80505780 None:intergenic 45.0%
!!! GGATGCACAAGTGCCTTTTT+TGG + chr1_1:80505771-80505790 None:intergenic 45.0%
AATCTGGATGTGGATGTTGG+AGG - chr1_1:80506016-80506035 Msa0047560:intron 45.0%
CTACCTTCAAGAGGACAGAT+AGG - chr1_1:80506081-80506100 Msa0047560:intron 45.0%
GTGCGTAGCAGTGGTAATAA+TGG - chr1_1:80506154-80506173 Msa0047560:intron 45.0%
TCCGGTTTCATTACGGACAT+AGG + chr1_1:80506353-80506372 None:intergenic 45.0%
TATGTCCGTAATGAAACCGG+AGG - chr1_1:80506352-80506371 Msa0047560:intron 45.0%
ATGTCCGTAATGAAACCGGA+GGG - chr1_1:80506353-80506372 Msa0047560:intron 45.0%
GATGGACAAATCATAGGTGG+TGG - chr1_1:80506412-80506431 Msa0047560:intron 45.0%
! CAAATCATAGGTGGTGGTGT+TGG - chr1_1:80506418-80506437 Msa0047560:intron 45.0%
! AACTGGACCAGCAGCTTTAA+GGG + chr1_1:80506449-80506468 None:intergenic 45.0%
TGCCAAAAAAGGGGGAAATG+AGG - chr1_1:80506661-80506680 Msa0047560:intron 45.0%
!!! CACCTCATTTCCCCCTTTTT+TGG + chr1_1:80506666-80506685 None:intergenic 45.0%
CAAAAAAGGGGGAAATGAGG+TGG - chr1_1:80506664-80506683 Msa0047560:intron 45.0%
ATTATCAGGTGGTGCTTGGT+AGG + chr1_1:80506825-80506844 None:intergenic 45.0%
! TGTACCGACAATGACCTGTA+GGG + chr1_1:80506892-80506911 None:intergenic 45.0%
! ATGTACCGACAATGACCTGT+AGG + chr1_1:80506893-80506912 None:intergenic 45.0%
AACAAGAAGGACACTAGTGC+TGG - chr1_1:80506924-80506943 Msa0047560:intron 45.0%
GATGAACATCAAGCTATGGG+TGG - chr1_1:80507062-80507081 Msa0047560:intron 45.0%
CATCCAGATTCAAGACATGC+TGG - chr1_1:80507152-80507171 Msa0047560:intron 45.0%
ATTGCAGGAAGAACAGGTCA+TGG - chr1_1:80507270-80507289 Msa0047560:intron 45.0%
TTGCAGGAAGAACAGGTCAT+GGG - chr1_1:80507271-80507290 Msa0047560:intron 45.0%
TTGGTCATAGCCTCCATTCT+CGG + chr1_1:80507310-80507329 None:intergenic 45.0%
CAAAGACTGCTGGTATGTAG+TGG + chr1_1:80507405-80507424 None:intergenic 45.0%
CGGATGGCGCATACTATAAA+TGG + chr1_1:80507438-80507457 None:intergenic 45.0%
ATAGTATGCGCCATCCGTTA+AGG - chr1_1:80507441-80507460 Msa0047560:intron 45.0%
!! ACGGAGAGAGGCATTAGAGA+TGG + chr1_1:80505415-80505434 None:intergenic 50.0%
! CTCCTGAAGATGCTGGTTGA+CGG + chr1_1:80505434-80505453 None:intergenic 50.0%
ATGTTGCCTCCTGAAGATGC+TGG + chr1_1:80505441-80505460 None:intergenic 50.0%
TGCACGCATCTGTGTGCTTA+TGG - chr1_1:80505937-80505956 Msa0047560:CDS 50.0%
CGTCCTATCTGTCCTCTTGA+AGG + chr1_1:80506087-80506106 None:intergenic 50.0%
TTCGCCCTCCGGTTTCATTA+CGG + chr1_1:80506360-80506379 None:intergenic 50.0%
! ATCATAGGTGGTGGTGTTGG+TGG - chr1_1:80506421-80506440 Msa0047560:intron 50.0%
!! TCATAGGTGGTGGTGTTGGT+GGG - chr1_1:80506422-80506441 Msa0047560:intron 50.0%
!! ACTGGACCAGCAGCTTTAAG+GGG + chr1_1:80506448-80506467 None:intergenic 50.0%
GAACTGGACCAGCAGCTTTA+AGG + chr1_1:80506450-80506469 None:intergenic 50.0%
TAAAGCTGCTGGTCCAGTTC+AGG - chr1_1:80506450-80506469 Msa0047560:CDS 50.0%
TAGGTGTGAAAGCAGGAAGG+TGG + chr1_1:80506806-80506825 None:intergenic 50.0%
TGGTAGGTGTGAAAGCAGGA+AGG + chr1_1:80506809-80506828 None:intergenic 50.0%
TGCTTGGTAGGTGTGAAAGC+AGG + chr1_1:80506813-80506832 None:intergenic 50.0%
! AAGAAGGACACTAGTGCTGG+TGG - chr1_1:80506927-80506946 Msa0047560:intron 50.0%
!! GACACTAGTGCTGGTGGAAA+AGG - chr1_1:80506933-80506952 Msa0047560:intron 50.0%
GATGGCAACTTACCAGCAGA+GGG + chr1_1:80506963-80506982 None:intergenic 50.0%
TGATGGCAACTTACCAGCAG+AGG + chr1_1:80506964-80506983 None:intergenic 50.0%
GGTAAGTTGCCATCACCAGT+TGG - chr1_1:80506969-80506988 Msa0047560:intron 50.0%
TGGAAGAGTCGACTGTTTGG+TGG + chr1_1:80507019-80507038 None:intergenic 50.0%
! CAAACAGTCGACTCTTCCAG+CGG - chr1_1:80507020-80507039 Msa0047560:intron 50.0%
! AAACAGTCGACTCTTCCAGC+GGG - chr1_1:80507021-80507040 Msa0047560:intron 50.0%
! CATGCTGGTTATGACCTGTC+AGG - chr1_1:80507167-80507186 Msa0047560:intron 50.0%
CACTGGACTTCATACCTGAC+AGG + chr1_1:80507184-80507203 None:intergenic 50.0%
TGGTCATAGCCTCCATTCTC+GGG + chr1_1:80507309-80507328 None:intergenic 50.0%
TACCAGCAGTCTTTGTCACG+AGG - chr1_1:80507410-80507429 Msa0047560:intron 50.0%
GTCAGAAGCCACGACCTTAA+CGG + chr1_1:80507458-80507477 None:intergenic 50.0%
GCAAGCACCTTGAAACGGAA+GGG + chr1_1:80507681-80507700 None:intergenic 50.0%
AGCAAGCACCTTGAAACGGA+AGG + chr1_1:80507682-80507701 None:intergenic 50.0%
! AGATGCTGGTTGACGGAGAG+AGG + chr1_1:80505427-80505446 None:intergenic 55.0%
CTCCGTCAACCAGCATCTTC+AGG - chr1_1:80505429-80505448 Msa0047560:three_prime_UTR 55.0%
CGTCAACCAGCATCTTCAGG+AGG - chr1_1:80505432-80505451 Msa0047560:three_prime_UTR 55.0%
AATGAAACCGGAGGGCGAAG+TGG - chr1_1:80506361-80506380 Msa0047560:intron 55.0%
GGAAAAGGTGATCCCTCTGC+TGG - chr1_1:80506948-80506967 Msa0047560:intron 55.0%
GGCGAGCCAGCATCAAGTTT+AGG - chr1_1:80506990-80507009 Msa0047560:intron 55.0%
CGCTGGAAGAGTCGACTGTT+TGG + chr1_1:80507022-80507041 None:intergenic 55.0%
ACCTCCCAGGTCTACAGAGT+GGG - chr1_1:80507124-80507143 Msa0047560:intron 55.0%
TCTCACCAGTCTCCCGAGAA+TGG - chr1_1:80507294-80507313 Msa0047560:intron 55.0%
! GAGATGGCTTGTGGGTTCGA+TGG - chr1_1:80507348-80507367 Msa0047560:intron 55.0%
GGTTCGATGGCACCAATGTC+TGG - chr1_1:80507361-80507380 Msa0047560:intron 55.0%
CACCTCGTGACAAAGACTGC+TGG + chr1_1:80507415-80507434 None:intergenic 55.0%
GAAGCCACGACCTTAACGGA+TGG + chr1_1:80507454-80507473 None:intergenic 55.0%
AAGACCACCACTTCGCCCTC+CGG + chr1_1:80506371-80506390 None:intergenic 60.0%
!! CTTGATGCTGGCTCGCCAAC+TGG + chr1_1:80506987-80507006 None:intergenic 60.0%
TCCAGCGGGAATCCAATCCG+AGG - chr1_1:80507035-80507054 Msa0047560:intron 60.0%
! TCCTCGGATTGGATTCCCGC+TGG + chr1_1:80507039-80507058 None:intergenic 60.0%
GTTTGCACGTGACACCTCCC+AGG - chr1_1:80507111-80507130 Msa0047560:intron 60.0%
CACCTCCCAGGTCTACAGAG+TGG - chr1_1:80507123-80507142 Msa0047560:intron 60.0%
CCTCCCAGGTCTACAGAGTG+GGG - chr1_1:80507125-80507144 Msa0047560:intron 60.0%
CTCCCAGGTCTACAGAGTGG+GGG - chr1_1:80507126-80507145 Msa0047560:intron 60.0%
CTCCCCCACTCTGTAGACCT+GGG + chr1_1:80507131-80507150 None:intergenic 60.0%
ACTCCCCCACTCTGTAGACC+TGG + chr1_1:80507132-80507151 None:intergenic 60.0%
CACCAGTCTCCCGAGAATGG+AGG - chr1_1:80507297-80507316 Msa0047560:intron 60.0%
AGCCTCCATTCTCGGGAGAC+TGG + chr1_1:80507302-80507321 None:intergenic 60.0%
TGCGCCATCCGTTAAGGTCG+TGG - chr1_1:80507447-80507466 Msa0047560:intron 60.0%
GAAACCGGAGGGCGAAGTGG+TGG - chr1_1:80506364-80506383 Msa0047560:intron 65.0%
GGTGGGCCCCTTAAAGCTGC+TGG - chr1_1:80506439-80506458 Msa0047560:intron 65.0%
!! GCTGGCTCGCCAACTGGTGA+TGG + chr1_1:80506981-80507000 None:intergenic 65.0%
CCCCACTCTGTAGACCTGGG+AGG + chr1_1:80507128-80507147 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 80505216 80507703 80505216 ID=Msa0047560;Name=Msa0047560
chr1_1 mRNA 80505216 80507703 80505216 ID=Msa0047560-mRNA-1;Parent=Msa0047560;Name=Msa0047560-mRNA-1;_AED=0.02;_eAED=0.02;_QI=141|1|1|1|1|1|4|362|207
chr1_1 exon 80505216 80505642 80505216 ID=Msa0047560-mRNA-1:exon:27807;Parent=Msa0047560-mRNA-1
chr1_1 exon 80505731 80506022 80505731 ID=Msa0047560-mRNA-1:exon:27806;Parent=Msa0047560-mRNA-1
chr1_1 exon 80506448 80506600 80506448 ID=Msa0047560-mRNA-1:exon:27805;Parent=Msa0047560-mRNA-1
chr1_1 exon 80507449 80507703 80507449 ID=Msa0047560-mRNA-1:exon:27804;Parent=Msa0047560-mRNA-1
chr1_1 five_prime_UTR 80507563 80507703 80507563 ID=Msa0047560-mRNA-1:five_prime_utr;Parent=Msa0047560-mRNA-1
chr1_1 CDS 80507449 80507562 80507449 ID=Msa0047560-mRNA-1:cds;Parent=Msa0047560-mRNA-1
chr1_1 CDS 80506448 80506600 80506448 ID=Msa0047560-mRNA-1:cds;Parent=Msa0047560-mRNA-1
chr1_1 CDS 80505731 80506022 80505731 ID=Msa0047560-mRNA-1:cds;Parent=Msa0047560-mRNA-1
chr1_1 CDS 80505578 80505642 80505578 ID=Msa0047560-mRNA-1:cds;Parent=Msa0047560-mRNA-1
chr1_1 three_prime_UTR 80505216 80505577 80505216 ID=Msa0047560-mRNA-1:three_prime_utr;Parent=Msa0047560-mRNA-1
Gene Sequence

>Msa0047560

ATGCAATTTATGCAACAAAATAGGGGTGAGATATGCATTATGTCTGCATCTGGTTCCATCTCTAATGCCTCTCTCCGTCAACCAGCATCTTCAGGAGGCAACATTATGTATGAGGGTCGGTTTGATATCATTTCGCTTACTGGTTCCTATGTCCGTAATGAAACCGGAGGGCGAAGTGGTGGTCTTAGCGTATGCTTGTCTAATTCTGATGGACAAATCATAGGTGGTGGTGTTGGTGGGCCCCTTAAAGCTGCTGGTCCAGTTCAGGTCATTGTCGGTACATTTTTTATGGACAACAAGAAGGACACTAGTGCTGGTGGAAAAGGTGATCCCTCTGCTGGTAAGTTGCCATCACCAGTTGGCGAGCCAGCATCAAGTTTAGGTTTCCACCAAACAGTCGACTCTTCCAGCGGGAATCCAATCCGAGGAAATGATGAACATCAAGCTATGGGTGGAAGCCATTACATGATTCAACAACTTGGTTTGCACGTGACACCTCCCAGGTCTACAGAGTGGGGGAGTCATCCAGATTCAAGACATGCTGGTTATGACCTGTCAGGAAGAACAGGTCATGGGTCTCACCAGTCTCCCGAGAATGGAGGCTATGACCAAATTCCTGATTGA

Protein sequence

>Msa0047560

MQFMQQNRGEICIMSASGSISNASLRQPASSGGNIMYEGRFDIISLTGSYVRNETGGRSGGLSVCLSNSDGQIIGGGVGGPLKAAGPVQVIVGTFFMDNKKDTSAGGKGDPSAGKLPSPVGEPASSLGFHQTVDSSSGNPIRGNDEHQAMGGSHYMIQQLGLHVTPPRSTEWGSHPDSRHAGYDLSGRTGHGSHQSPENGGYDQIPD*