Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0047970 | sp|Q9SLN8|DBR_TOBAC | 40.000 | 350 | 198 | 8 | 342 | 689 | 1 | 340 | 1.43e-73 | 244 |
| Msa0047970 | sp|Q9SLN8|DBR_TOBAC | 42.264 | 265 | 146 | 4 | 52 | 313 | 80 | 340 | 2.61e-61 | 211 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0017710 | Msa0047970 | 0.823930 | 1.062508e-53 | -8.615850e-47 |
| Msa0024650 | Msa0047970 | 0.825597 | 4.297613e-54 | -8.615850e-47 |
| Msa0047560 | Msa0047970 | -0.805640 | 1.211030e-49 | -8.615850e-47 |
| Msa0047970 | Msa0072180 | 0.840129 | 1.047322e-57 | -8.615850e-47 |
| Msa0047970 | Msa0106540 | 0.810034 | 1.408723e-50 | -8.615850e-47 |
| Msa0047970 | Msa0120450 | 0.837899 | 3.958703e-57 | -8.615850e-47 |
| Msa0047970 | Msa0160380 | 0.823614 | 1.259829e-53 | -8.615850e-47 |
| Msa0047970 | Msa0163690 | 0.812458 | 4.196268e-51 | -8.615850e-47 |
| Msa0047970 | Msa0211460 | 0.813680 | 2.263876e-51 | -8.615850e-47 |
| Msa0047970 | Msa0224870 | 0.800494 | 1.404059e-48 | -8.615850e-47 |
| Msa0047970 | Msa0260840 | 0.913923 | 3.502421e-84 | -8.615850e-47 |
| Msa0047970 | Msa0279810 | 0.804266 | 2.346005e-49 | -8.615850e-47 |
| Msa0047970 | Msa0298690 | 0.931958 | 1.744577e-94 | -8.615850e-47 |
| Msa0047970 | Msa0307630 | 0.807352 | 5.270239e-50 | -8.615850e-47 |
| Msa0047970 | Msa0319220 | 0.817261 | 3.615101e-52 | -8.615850e-47 |
| Msa0047970 | Msa0333770 | 0.809319 | 2.006496e-50 | -8.615850e-47 |
| Msa0047970 | Msa0354600 | 0.848835 | 4.758536e-60 | -8.615850e-47 |
| Msa0047970 | Msa0364030 | -0.809897 | 1.507453e-50 | -8.615850e-47 |
| Msa0047970 | Msa0403740 | -0.809316 | 2.009763e-50 | -8.615850e-47 |
| Msa0047970 | Msa0434910 | 0.800057 | 1.722612e-48 | -8.615850e-47 |
| Msa0047970 | Msa0444210 | 0.821510 | 3.885627e-53 | -8.615850e-47 |
| Msa0047970 | Msa0448190 | 0.802590 | 5.219929e-49 | -8.615850e-47 |
| Msa0047970 | Msa0456450 | -0.803063 | 4.168820e-49 | -8.615850e-47 |
| Msa0047970 | Msa0459930 | 0.809475 | 1.858204e-50 | -8.615850e-47 |
| Msa0047970 | Msa0464620 | 0.807224 | 5.611997e-50 | -8.615850e-47 |
| Msa0047970 | Msa0510050 | 0.802192 | 6.304940e-49 | -8.615850e-47 |
| Msa0047970 | Msa0546590 | 0.819459 | 1.148710e-52 | -8.615850e-47 |
| Msa0047970 | Msa0567330 | 0.831518 | 1.594866e-55 | -8.615850e-47 |
| Msa0047970 | Msa0567570 | 0.835064 | 2.085016e-56 | -8.615850e-47 |
| Msa0047970 | Msa0576320 | 0.832714 | 8.074651e-56 | -8.615850e-47 |
| Msa0047970 | Msa0587730 | 0.810021 | 1.417538e-50 | -8.615850e-47 |
| Msa0047970 | Msa0604190 | 0.804001 | 2.662916e-49 | -8.615850e-47 |
| Msa0047970 | Msa0606600 | 0.809349 | 1.977129e-50 | -8.615850e-47 |
| Msa0047970 | Msa0629160 | 0.811312 | 7.456983e-51 | -8.615850e-47 |
| Msa0047970 | Msa0643230 | 0.820750 | 5.814595e-53 | -8.615850e-47 |
| Msa0047970 | Msa0647300 | 0.805476 | 1.310846e-49 | -8.615850e-47 |
| Msa0047970 | Msa0682110 | 0.804902 | 1.728065e-49 | -8.615850e-47 |
| Msa0047970 | Msa0682160 | 0.815874 | 7.393744e-52 | -8.615850e-47 |
| Msa0047970 | Msa0686830 | 0.812512 | 4.084782e-51 | -8.615850e-47 |
| Msa0047970 | Msa0699170 | 0.800552 | 1.366115e-48 | -8.615850e-47 |
| Msa0047970 | Msa0709790 | 0.801253 | 9.823242e-49 | -8.615850e-47 |
| Msa0047970 | Msa0716980 | 0.808953 | 2.403297e-50 | -8.615850e-47 |
| Msa0047970 | Msa0732970 | 0.806877 | 6.644493e-50 | -8.615850e-47 |
| Msa0047970 | Msa0773960 | 0.809055 | 2.286442e-50 | -8.615850e-47 |
| Msa0047970 | Msa0792410 | 0.809553 | 1.787176e-50 | -8.615850e-47 |
| Msa0047970 | Msa0812720 | 0.849165 | 3.852597e-60 | -8.615850e-47 |
| Msa0047970 | Msa0838210 | 0.810905 | 9.133597e-51 | -8.615850e-47 |
| Msa0047970 | Msa0851760 | 0.810222 | 1.282968e-50 | -8.615850e-47 |
| Msa0047970 | Msa0852890 | 0.800983 | 1.115685e-48 | -8.615850e-47 |
| Msa0047970 | Msa0906680 | 0.800182 | 1.624790e-48 | -8.615850e-47 |
| Msa0047970 | Msa0975950 | 0.819919 | 9.017061e-53 | -8.615850e-47 |
| Msa0047970 | Msa0987020 | 0.818437 | 1.960791e-52 | -8.615850e-47 |
| Msa0047970 | Msa1068730 | 0.831322 | 1.782423e-55 | -8.615850e-47 |
| Msa0047970 | Msa1107520 | 0.817541 | 3.125859e-52 | -8.615850e-47 |
| Msa0047970 | Msa1108560 | 0.801459 | 8.913089e-49 | -8.615850e-47 |
| Msa0047970 | Msa1111910 | 0.829920 | 3.930064e-55 | -8.615850e-47 |
| Msa0047970 | Msa1160540 | 0.815757 | 7.850866e-52 | -8.615850e-47 |
| Msa0047970 | Msa1165460 | 0.800057 | 1.722724e-48 | -8.615850e-47 |
| Msa0047970 | Msa1179270 | 0.811137 | 8.135168e-51 | -8.615850e-47 |
| Msa0047970 | Msa1184680 | 0.801084 | 1.063798e-48 | -8.615850e-47 |
| Msa0047970 | Msa1191530 | -0.800718 | 1.263840e-48 | -8.615850e-47 |
| Msa0047970 | Msa1203650 | 0.804657 | 1.944299e-49 | -8.615850e-47 |
| Msa0047970 | Msa1223960 | 0.812995 | 3.202114e-51 | -8.615850e-47 |
| Msa0047970 | Msa1240490 | 0.814969 | 1.175092e-51 | -8.615850e-47 |
| Msa0047970 | Msa1259570 | 0.804642 | 1.958920e-49 | -8.615850e-47 |
| Msa0047970 | Msa1263110 | 0.816616 | 5.045929e-52 | -8.615850e-47 |
| Msa0047970 | Msa1273320 | 0.812154 | 4.889801e-51 | -8.615850e-47 |
| Msa0047970 | Msa1281780 | 0.821329 | 4.277236e-53 | -8.615850e-47 |
| Msa0047970 | Msa1283980 | 0.806747 | 7.078470e-50 | -8.615850e-47 |
| Msa0047970 | Msa1295210 | -0.808215 | 3.454759e-50 | -8.615850e-47 |
| Msa0047970 | Msa1311370 | 0.803986 | 2.683250e-49 | -8.615850e-47 |
| Msa0047970 | Msa1321010 | 0.808618 | 2.834711e-50 | -8.615850e-47 |
| Msa0047970 | Msa1322980 | 0.800389 | 1.474558e-48 | -8.615850e-47 |
| Msa0047970 | Msa1342360 | -0.802351 | 5.845203e-49 | -8.615850e-47 |
| Msa0047970 | Msa1342760 | 0.802748 | 4.841203e-49 | -8.615850e-47 |
| Msa0047970 | Msa1364690 | 0.805894 | 1.071012e-49 | -8.615850e-47 |
| Msa0047970 | Msa1376880 | 0.800505 | 1.396422e-48 | -8.615850e-47 |
| Msa0047970 | Msa1384130 | 0.800134 | 1.661737e-48 | -8.615850e-47 |
| Msa0047970 | Msa1405830 | 0.809605 | 1.741805e-50 | -8.615850e-47 |
| Msa0047970 | Msa1407810 | 0.835186 | 1.942273e-56 | -8.615850e-47 |
| Msa0047970 | Msa1417220 | 0.806308 | 8.762932e-50 | -8.615850e-47 |
| Msa0047970 | Msa1431030 | 0.983170 | 5.105431e-157 | -8.615850e-47 |
| Msa0047970 | Msa1433360 | 0.824299 | 8.704739e-54 | -8.615850e-47 |
| Msa0047970 | Msa1437780 | 0.835167 | 1.963923e-56 | -8.615850e-47 |
| Msa0047970 | Msa1455360 | 0.817434 | 3.303649e-52 | -8.615850e-47 |
| Msa0047970 | Msa1458270 | 0.822156 | 2.754323e-53 | -8.615850e-47 |
| Msa0047970 | Msa1462610 | 0.808042 | 3.761872e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0047970 | MtrunA17_Chr2g0322531 | 94.857 | 350 | 17 | 1 | 342 | 691 | 1 | 349 | 0.0 | 673 |
| Msa0047970 | MtrunA17_Chr2g0322531 | 78.510 | 349 | 41 | 3 | 1 | 315 | 1 | 349 | 0.0 | 534 |
| Msa0047970 | MtrunA17_Chr2g0322551 | 86.325 | 351 | 46 | 2 | 342 | 691 | 1 | 350 | 0.0 | 592 |
| Msa0047970 | MtrunA17_Chr2g0322551 | 79.310 | 348 | 38 | 2 | 2 | 315 | 3 | 350 | 0.0 | 524 |
| Msa0047970 | MtrunA17_Chr2g0322541 | 86.455 | 347 | 12 | 2 | 1 | 312 | 1 | 347 | 0.0 | 574 |
| Msa0047970 | MtrunA17_Chr2g0322541 | 83.908 | 348 | 54 | 2 | 342 | 688 | 1 | 347 | 0.0 | 573 |
| Msa0047970 | MtrunA17_Chr8g0337371 | 34.912 | 739 | 348 | 29 | 52 | 689 | 128 | 834 | 1.71e-109 | 350 |
| Msa0047970 | MtrunA17_Chr8g0337371 | 40.456 | 351 | 191 | 11 | 346 | 691 | 52 | 389 | 7.42e-63 | 224 |
| Msa0047970 | MtrunA17_Chr7g0214831 | 39.244 | 344 | 203 | 5 | 346 | 689 | 6 | 343 | 7.12e-75 | 244 |
| Msa0047970 | MtrunA17_Chr7g0214831 | 43.396 | 265 | 144 | 3 | 52 | 313 | 82 | 343 | 4.39e-66 | 221 |
| Msa0047970 | MtrunA17_Chr8g0337471 | 41.379 | 348 | 190 | 8 | 346 | 689 | 4 | 341 | 2.57e-74 | 243 |
| Msa0047970 | MtrunA17_Chr8g0337471 | 43.396 | 265 | 143 | 4 | 52 | 313 | 81 | 341 | 1.69e-63 | 214 |
| Msa0047970 | MtrunA17_Chr8g0337361 | 43.020 | 351 | 179 | 10 | 346 | 689 | 63 | 399 | 3.77e-72 | 239 |
| Msa0047970 | MtrunA17_Chr8g0337361 | 44.528 | 265 | 140 | 4 | 52 | 313 | 139 | 399 | 2.56e-65 | 221 |
| Msa0047970 | MtrunA17_Chr8g0337491 | 39.437 | 355 | 196 | 8 | 347 | 689 | 5 | 352 | 9.72e-72 | 239 |
| Msa0047970 | MtrunA17_Chr8g0337491 | 37.714 | 350 | 191 | 8 | 53 | 397 | 93 | 420 | 2.12e-66 | 224 |
| Msa0047970 | MtrunA17_Chr8g0337451 | 40.922 | 347 | 193 | 8 | 346 | 689 | 4 | 341 | 1.89e-70 | 233 |
| Msa0047970 | MtrunA17_Chr8g0337451 | 45.283 | 265 | 138 | 4 | 52 | 313 | 81 | 341 | 1.35e-62 | 212 |
| Msa0047970 | MtrunA17_Chr8g0337481 | 44.484 | 281 | 143 | 6 | 411 | 689 | 13 | 282 | 1.13e-68 | 226 |
| Msa0047970 | MtrunA17_Chr8g0337481 | 43.396 | 265 | 143 | 4 | 52 | 313 | 22 | 282 | 5.14e-65 | 216 |
| Msa0047970 | MtrunA17_Chr2g0307121 | 34.770 | 348 | 212 | 9 | 346 | 687 | 3 | 341 | 5.98e-60 | 205 |
| Msa0047970 | MtrunA17_Chr2g0307121 | 38.516 | 283 | 163 | 5 | 32 | 311 | 67 | 341 | 1.24e-57 | 199 |
| Msa0047970 | MtrunA17_Chr4g0043061 | 37.677 | 353 | 200 | 10 | 344 | 689 | 8 | 347 | 3.08e-57 | 197 |
| Msa0047970 | MtrunA17_Chr4g0043061 | 42.264 | 265 | 146 | 4 | 52 | 313 | 87 | 347 | 5.99e-57 | 197 |
| Msa0047970 | MtrunA17_Chr8g0335881 | 41.485 | 229 | 116 | 8 | 346 | 567 | 4 | 221 | 3.72e-37 | 138 |
| Msa0047970 | MtrunA17_Chr8g0335881 | 42.553 | 141 | 76 | 3 | 52 | 189 | 80 | 218 | 5.72e-28 | 112 |
| Msa0047970 | MtrunA17_Chr4g0045061 | 33.197 | 244 | 150 | 7 | 76 | 313 | 386 | 622 | 3.44e-25 | 110 |
| Msa0047970 | MtrunA17_Chr4g0045061 | 30.522 | 249 | 156 | 7 | 447 | 689 | 385 | 622 | 5.70e-22 | 100 |
| Msa0047970 | MtrunA17_Chr5g0445921 | 38.462 | 130 | 78 | 1 | 560 | 689 | 8 | 135 | 1.62e-24 | 99.8 |
| Msa0047970 | MtrunA17_Chr5g0445921 | 39.370 | 127 | 75 | 1 | 187 | 313 | 11 | 135 | 2.68e-24 | 99.0 |
| Msa0047970 | MtrunA17_Chr4g0045041 | 32.377 | 244 | 152 | 6 | 76 | 313 | 386 | 622 | 2.69e-23 | 105 |
| Msa0047970 | MtrunA17_Chr4g0045041 | 30.120 | 249 | 157 | 6 | 447 | 689 | 385 | 622 | 4.52e-21 | 98.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0047970 | AT5G16970.1 | 41.056 | 341 | 176 | 10 | 360 | 689 | 16 | 342 | 2.53e-71 | 236 |
| Msa0047970 | AT5G16970.1 | 44.403 | 268 | 137 | 6 | 52 | 313 | 81 | 342 | 1.52e-63 | 215 |
| Msa0047970 | AT1G65560.1 | 40.857 | 350 | 194 | 8 | 345 | 689 | 6 | 347 | 1.18e-70 | 234 |
| Msa0047970 | AT1G65560.1 | 46.067 | 267 | 137 | 4 | 52 | 313 | 83 | 347 | 5.42e-62 | 211 |
| Msa0047970 | AT3G03080.1 | 40.793 | 353 | 186 | 11 | 346 | 689 | 9 | 347 | 5.11e-68 | 227 |
| Msa0047970 | AT3G03080.1 | 44.151 | 265 | 141 | 4 | 52 | 313 | 87 | 347 | 6.07e-62 | 211 |
| Msa0047970 | AT5G16990.1 | 40.179 | 336 | 185 | 9 | 360 | 689 | 15 | 340 | 1.11e-67 | 226 |
| Msa0047970 | AT5G16990.1 | 43.609 | 266 | 142 | 5 | 52 | 313 | 79 | 340 | 3.85e-62 | 211 |
| Msa0047970 | AT1G26320.1 | 40.173 | 346 | 189 | 10 | 346 | 684 | 9 | 343 | 1.21e-66 | 223 |
| Msa0047970 | AT1G26320.1 | 40.794 | 277 | 158 | 3 | 35 | 308 | 70 | 343 | 2.12e-59 | 204 |
| Msa0047970 | AT5G17000.1 | 40.663 | 332 | 174 | 9 | 367 | 689 | 25 | 342 | 2.70e-66 | 222 |
| Msa0047970 | AT5G17000.1 | 41.958 | 286 | 149 | 6 | 41 | 313 | 61 | 342 | 1.09e-61 | 210 |
| Msa0047970 | AT5G37940.1 | 39.233 | 339 | 186 | 9 | 360 | 689 | 23 | 350 | 7.27e-65 | 219 |
| Msa0047970 | AT5G37940.1 | 43.494 | 269 | 138 | 6 | 52 | 313 | 89 | 350 | 8.24e-60 | 205 |
| Msa0047970 | AT5G16960.2 | 39.710 | 345 | 186 | 9 | 352 | 689 | 14 | 343 | 1.87e-64 | 217 |
| Msa0047970 | AT5G16960.2 | 43.609 | 266 | 142 | 5 | 52 | 313 | 82 | 343 | 7.95e-59 | 202 |
| Msa0047970 | AT5G16960.1 | 39.710 | 345 | 186 | 9 | 352 | 689 | 14 | 343 | 1.87e-64 | 217 |
| Msa0047970 | AT5G16960.1 | 43.609 | 266 | 142 | 5 | 52 | 313 | 82 | 343 | 7.95e-59 | 202 |
| Msa0047970 | AT5G37980.1 | 39.755 | 327 | 180 | 8 | 372 | 689 | 32 | 350 | 5.55e-64 | 216 |
| Msa0047970 | AT5G37980.1 | 43.866 | 269 | 137 | 6 | 52 | 313 | 89 | 350 | 1.83e-60 | 207 |
| Msa0047970 | AT5G38000.1 | 39.450 | 327 | 181 | 8 | 372 | 689 | 32 | 350 | 9.81e-64 | 216 |
| Msa0047970 | AT5G38000.1 | 43.123 | 269 | 139 | 6 | 52 | 313 | 89 | 350 | 9.71e-60 | 205 |
| Msa0047970 | AT1G26320.2 | 39.595 | 346 | 186 | 11 | 346 | 684 | 9 | 338 | 3.50e-63 | 214 |
| Msa0047970 | AT1G26320.2 | 40.072 | 277 | 155 | 4 | 35 | 308 | 70 | 338 | 7.82e-56 | 194 |
| Msa0047970 | AT1G65560.2 | 46.067 | 267 | 137 | 4 | 52 | 313 | 7 | 271 | 6.80e-63 | 211 |
| Msa0047970 | AT1G65560.2 | 44.322 | 273 | 147 | 4 | 419 | 689 | 2 | 271 | 3.23e-62 | 209 |
| Msa0047970 | AT5G38000.3 | 39.365 | 315 | 174 | 8 | 372 | 677 | 32 | 338 | 3.99e-60 | 206 |
| Msa0047970 | AT5G38000.3 | 43.191 | 257 | 132 | 6 | 52 | 301 | 89 | 338 | 4.19e-56 | 195 |
| Msa0047970 | AT5G16980.2 | 38.591 | 298 | 168 | 5 | 19 | 313 | 17 | 302 | 4.36e-59 | 201 |
| Msa0047970 | AT5G16980.2 | 44.749 | 219 | 118 | 2 | 471 | 689 | 87 | 302 | 6.55e-57 | 196 |
| Msa0047970 | AT3G59845.1 | 38.095 | 357 | 200 | 10 | 342 | 689 | 1 | 345 | 8.45e-59 | 202 |
| Msa0047970 | AT3G59845.1 | 40.000 | 285 | 160 | 4 | 32 | 313 | 69 | 345 | 1.47e-54 | 191 |
| Msa0047970 | AT5G16980.1 | 46.411 | 209 | 110 | 1 | 105 | 313 | 30 | 236 | 2.51e-58 | 197 |
| Msa0047970 | AT5G16980.1 | 44.749 | 219 | 118 | 2 | 471 | 689 | 21 | 236 | 1.19e-57 | 195 |
| Msa0047970 | AT5G16980.3 | 46.411 | 209 | 110 | 1 | 105 | 313 | 30 | 236 | 2.51e-58 | 197 |
| Msa0047970 | AT5G16980.3 | 44.749 | 219 | 118 | 2 | 471 | 689 | 21 | 236 | 1.19e-57 | 195 |
| Msa0047970 | AT5G38000.2 | 37.309 | 327 | 169 | 9 | 372 | 689 | 32 | 331 | 7.61e-54 | 188 |
| Msa0047970 | AT5G38000.2 | 40.977 | 266 | 130 | 6 | 52 | 313 | 89 | 331 | 4.61e-53 | 186 |
| Msa0047970 | AT3G59845.2 | 43.460 | 237 | 128 | 3 | 80 | 313 | 10 | 243 | 3.89e-52 | 181 |
| Msa0047970 | AT3G59845.2 | 42.982 | 228 | 127 | 2 | 462 | 689 | 19 | 243 | 7.71e-52 | 180 |
| Msa0047970 | AT5G17000.2 | 41.063 | 207 | 102 | 7 | 367 | 564 | 25 | 220 | 1.30e-33 | 129 |
| Msa0047970 | AT5G17000.2 | 41.104 | 163 | 81 | 5 | 41 | 190 | 61 | 221 | 1.49e-26 | 109 |
| Msa0047970 | AT1G49670.1 | 31.707 | 246 | 151 | 8 | 76 | 313 | 382 | 618 | 3.34e-22 | 102 |
| Msa0047970 | AT1G49670.1 | 30.120 | 249 | 157 | 6 | 447 | 689 | 381 | 618 | 3.38e-20 | 95.5 |
| Msa0047970 | AT1G49670.2 | 33.000 | 200 | 124 | 6 | 120 | 313 | 446 | 641 | 1.46e-19 | 93.6 |
| Msa0047970 | AT1G49670.2 | 28.788 | 264 | 164 | 6 | 447 | 689 | 381 | 641 | 4.71e-17 | 85.9 |
| Msa0047970 | AT4G21580.1 | 28.958 | 259 | 168 | 9 | 435 | 688 | 77 | 324 | 3.36e-13 | 71.6 |
| Msa0047970 | AT4G21580.1 | 29.297 | 256 | 167 | 9 | 63 | 312 | 77 | 324 | 3.62e-12 | 68.6 |
| Msa0047970 | AT4G21580.2 | 28.846 | 260 | 169 | 9 | 435 | 689 | 44 | 292 | 3.66e-13 | 71.2 |
| Msa0047970 | AT4G21580.2 | 29.183 | 257 | 168 | 9 | 63 | 313 | 44 | 292 | 3.47e-12 | 68.2 |
Find 166 sgRNAs with CRISPR-Local
Find 490 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAAATTATCTCGGTTCTTT+AGG | 0.209039 | 1_1:-81193417 | Msa0047970:intron |
| AAGCTCATCAAAGAGAATTT+TGG | 0.226510 | 1_1:-81192176 | Msa0047970:CDS |
| GTTGATATTGTGGAATAAAA+AGG | 0.237797 | 1_1:+81193837 | None:intergenic |
| TACCCTCTTCTGACATAATT+AGG | 0.243258 | 1_1:-81198213 | Msa0047970:CDS |
| TAAGTATATTTCCATATCTT+TGG | 0.251947 | 1_1:+81196364 | None:intergenic |
| TCAACGGCTAGATGGTTATC+TGG | 0.283090 | 1_1:+81198633 | None:intergenic |
| AGGAAAATTGATCCTGCTAA+TGG | 0.294618 | 1_1:-81198193 | Msa0047970:CDS |
| AAATCATATTTGCATCGTTT+TGG | 0.310312 | 1_1:-81191036 | Msa0047970:CDS |
| AACACATTGGATCCTGGCTT+TGG | 0.311058 | 1_1:+81192921 | None:intergenic |
| CGAATTGGACATGGGAGATT+TGG | 0.315863 | 1_1:-81194050 | Msa0047970:CDS |
| GTGTTCATATCTGCTGCTTC+TGG | 0.322794 | 1_1:-81192903 | Msa0047970:CDS |
| CTCACTGTATTTACTATCCT+TGG | 0.324250 | 1_1:+81193542 | None:intergenic |
| GTGATTGTTCCGCGAAGATA+TGG | 0.324490 | 1_1:+81193875 | None:intergenic |
| GAATCATATTGGGATCGTTT+TGG | 0.328570 | 1_1:-81196395 | Msa0047970:CDS |
| ATTTCTAATGCCTTCTCTTT+CGG | 0.329200 | 1_1:+81191107 | None:intergenic |
| AACACATGTGATCCTGGTTT+TGG | 0.331396 | 1_1:+81197603 | None:intergenic |
| AAACTCATTAAAGAGGAATT+AGG | 0.333739 | 1_1:-81197380 | Msa0047970:CDS |
| TCAACGGCTAGATGGTCTTC+AGG | 0.338735 | 1_1:+81193920 | None:intergenic |
| GTTATCTGGGATTGAATCAT+TGG | 0.347572 | 1_1:+81198647 | None:intergenic |
| ATTGCACATTGCATCCGAAT+TGG | 0.361454 | 1_1:-81194065 | Msa0047970:CDS |
| CATTAGAAATCTTCTGAATA+TGG | 0.361827 | 1_1:-81196453 | Msa0047970:CDS |
| AGCGGGGTTTGCAGCATGGC+TGG | 0.365376 | 1_1:-81197646 | Msa0047970:CDS |
| GGTGAGGATGGAAGGCTATA+TGG | 0.372074 | 1_1:-81191061 | Msa0047970:CDS |
| TCCACAATATCAACTTAATC+AGG | 0.375511 | 1_1:-81193828 | Msa0047970:intron |
| TCCGAGGTTGGAACACCTTC+AGG | 0.383872 | 1_1:+81193992 | None:intergenic |
| TTACAACATTTGCAGTTGTA+AGG | 0.385135 | 1_1:-81193575 | Msa0047970:CDS |
| AAAAGTTGTTGTTCAAGTTA+AGG | 0.388021 | 1_1:-81190887 | Msa0047970:CDS |
| TCTGAGGTTGGAACACCTTC+AGG | 0.388635 | 1_1:+81198705 | None:intergenic |
| ACACATTGGATCCTGGCTTT+GGG | 0.390179 | 1_1:+81192922 | None:intergenic |
| GGAAAATTGATCCTGCTAAT+GGG | 0.391945 | 1_1:-81198192 | Msa0047970:CDS |
| AATGTTTGAGTGTCTGCAAT+TGG | 0.414832 | 1_1:+81194085 | None:intergenic |
| AAGGCTTGTCTATGATATAT+AGG | 0.415410 | 1_1:+81194110 | None:intergenic |
| GATGATATCTCAATATAATA+AGG | 0.417882 | 1_1:-81191267 | Msa0047970:intron |
| CAAATCTCCCATGTCCAATT+CGG | 0.423836 | 1_1:+81194051 | None:intergenic |
| TGCTAAGATCCGAGGGTGTC+GGG | 0.424438 | 1_1:-81197535 | Msa0047970:CDS |
| GGTGGGAAAGGAGGTGAGGA+TGG | 0.424678 | 1_1:-81191073 | Msa0047970:CDS |
| AATGTTGGAGCTAGAGAATA+AGG | 0.425223 | 1_1:+81196271 | None:intergenic |
| CCAAAGAGTAAAATCAATAT+CGG | 0.426147 | 1_1:-81190964 | Msa0047970:CDS |
| CCTGGGTTCGCAGCATGGTT+AGG | 0.428468 | 1_1:-81192963 | Msa0047970:CDS |
| TTTCTAATTATATGAAAAGA+AGG | 0.431114 | 1_1:+81193468 | None:intergenic |
| TCAAAGAATAAAATAAATAT+CGG | 0.432706 | 1_1:-81196323 | Msa0047970:CDS |
| ATTTCACTGTCGGATTATCT+TGG | 0.434743 | 1_1:-81198169 | Msa0047970:intron |
| GTGTTCATATCTGCTGCATC+TGG | 0.436045 | 1_1:-81197585 | Msa0047970:CDS |
| GGAGAGTTTCAACGGCTAGA+TGG | 0.438365 | 1_1:+81198625 | None:intergenic |
| ACAATCACCGGCACCCTTGA+AGG | 0.439753 | 1_1:-81193860 | Msa0047970:CDS |
| TAAATAATTTCAGGAGTACC+TGG | 0.440097 | 1_1:-81192981 | Msa0047970:intron |
| GGAGAGTTTCAACGGCTAGA+TGG | 0.442497 | 1_1:+81193912 | None:intergenic |
| TGAACAATTGCAGGAGTAGC+GGG | 0.452858 | 1_1:-81197663 | Msa0047970:intron |
| CGCAGCATGGTTAGGAATAG+AGG | 0.456840 | 1_1:-81192955 | Msa0047970:CDS |
| TTAGGTGAAACTCATTAAAG+AGG | 0.460079 | 1_1:-81197387 | Msa0047970:intron |
| AATGATATCTCAATATAATC+AGG | 0.460646 | 1_1:-81196608 | Msa0047970:intron |
| ATCCGAGGGTGTCGGGTCAT+CGG | 0.461299 | 1_1:-81197528 | Msa0047970:CDS |
| TGTAGGGTCATTGGCAGCAC+TGG | 0.462075 | 1_1:-81192837 | Msa0047970:CDS |
| AGGTAAACATCAATACCATC+AGG | 0.462166 | 1_1:+81191365 | None:intergenic |
| GCTTTCTACCAAATCTTCCA+TGG | 0.463126 | 1_1:+81198755 | None:intergenic |
| GGAAAGGAGGTGAGGATGGA+AGG | 0.464290 | 1_1:-81191069 | Msa0047970:CDS |
| GATAGTGAAATCCCATTAGC+AGG | 0.467976 | 1_1:+81193438 | None:intergenic |
| TGGCTGGGAATAGAGGTAAT+AGG | 0.471384 | 1_1:-81197630 | Msa0047970:CDS |
| TTGCTAAGATACGAGGATGT+AGG | 0.473300 | 1_1:-81192854 | Msa0047970:CDS |
| TTCTAGCATGCTTGTTGACA+TGG | 0.473843 | 1_1:+81196644 | None:intergenic |
| TGCAGCATGGCTGGGAATAG+AGG | 0.473933 | 1_1:-81197637 | Msa0047970:CDS |
| AAGCACGGGCTCCGATGATA+AGG | 0.479614 | 1_1:-81197505 | Msa0047970:intron |
| CGTAACCATTCCCATTCAAA+AGG | 0.480702 | 1_1:+81198254 | None:intergenic |
| CATGCTAGAATACCTCTTTG+TGG | 0.481113 | 1_1:-81196631 | Msa0047970:CDS |
| ATGCTAGAATACCACTTTGT+GGG | 0.481843 | 1_1:-81191289 | Msa0047970:CDS |
| GTGTCGGGTCATCGGAAGCA+CGG | 0.483946 | 1_1:-81197520 | Msa0047970:CDS |
| CGAGACCATATCCATTCAAA+AGG | 0.487436 | 1_1:+81193511 | None:intergenic |
| ATACGAGGATGTAGGGTCAT+TGG | 0.487753 | 1_1:-81192846 | Msa0047970:CDS |
| TGTCGGGTCATCGGAAGCAC+GGG | 0.487784 | 1_1:-81197519 | Msa0047970:CDS |
| TCCGTTGATCCATATCTTCG+CGG | 0.487808 | 1_1:-81193884 | Msa0047970:CDS |
| CAACGGCTAGATGGTTATCT+GGG | 0.490879 | 1_1:+81198634 | None:intergenic |
| CAAGAGAAAGAGAGACGGTC+CGG | 0.490909 | 1_1:+81198670 | None:intergenic |
| GTACTAGGAGACCCAAAGCC+AGG | 0.490910 | 1_1:-81192933 | Msa0047970:CDS |
| CAACGGCTAGATGGTCTTCA+GGG | 0.493384 | 1_1:+81193921 | None:intergenic |
| CATTGCATCCGAATTGGACA+TGG | 0.494799 | 1_1:-81194059 | Msa0047970:CDS |
| TCTGCTGCTTCTGGTGCTGT+TGG | 0.500057 | 1_1:-81192894 | Msa0047970:CDS |
| GGTGCTGTTGGTATGAATGC+TGG | 0.505825 | 1_1:-81192882 | Msa0047970:CDS |
| TGCTAATGGGATTTCACTGT+CGG | 0.506781 | 1_1:-81198179 | Msa0047970:CDS |
| GGTGCTGTTGGTATGAGTGC+TGG | 0.507125 | 1_1:-81197564 | Msa0047970:CDS |
| TTGAACAATTGCAGGAGTAG+CGG | 0.509075 | 1_1:-81197664 | Msa0047970:intron |
| GATATGAACACATGTGATCC+TGG | 0.511175 | 1_1:+81197597 | None:intergenic |
| TCCTGAAGGTGTTCCAACCT+CGG | 0.512018 | 1_1:-81193993 | Msa0047970:CDS |
| TTATTCTCTAGCTCCAACAT+TGG | 0.513817 | 1_1:-81196269 | Msa0047970:CDS |
| TTCTAGCATTCTTGTTGACA+TGG | 0.514997 | 1_1:+81191303 | None:intergenic |
| GACAGTGAAATCCCATTAGC+AGG | 0.516499 | 1_1:+81198181 | None:intergenic |
| GTCTTCAGGGATTGAATCAT+CGG | 0.517771 | 1_1:+81193934 | None:intergenic |
| TCTTCTGAATATGGTGGGAA+AGG | 0.518305 | 1_1:-81196444 | Msa0047970:CDS |
| TTGCTAAGATCCGAGGGTGT+CGG | 0.518347 | 1_1:-81197536 | Msa0047970:CDS |
| TGGTTAGGAATAGAGGTACT+AGG | 0.520082 | 1_1:-81192948 | Msa0047970:CDS |
| TGCTAAGATACGAGGATGTA+GGG | 0.520424 | 1_1:-81192853 | Msa0047970:CDS |
| AGTTTAAGATGATCCGAGGT+TGG | 0.522459 | 1_1:+81193980 | None:intergenic |
| TCTTCTGAACATGGTGGGAA+AGG | 0.523236 | 1_1:-81191085 | Msa0047970:CDS |
| ATATGGTGGGAAAGGAAGTA+AGG | 0.523824 | 1_1:-81196436 | Msa0047970:CDS |
| GGTGGGAAAGGAAGTAAGGA+TGG | 0.524544 | 1_1:-81196432 | Msa0047970:CDS |
| AATGCTAGAATACCACTTTG+TGG | 0.527279 | 1_1:-81191290 | Msa0047970:CDS |
| GAGTAGCGGGGTTTGCAGCA+TGG | 0.527507 | 1_1:-81197650 | Msa0047970:CDS |
| AGTTTAAGATGATCTGAGGT+TGG | 0.528062 | 1_1:+81198693 | None:intergenic |
| TCTGCTGCATCTGGTGCTGT+TGG | 0.528533 | 1_1:-81197576 | Msa0047970:CDS |
| ATTTCACTATCAAATTATCT+CGG | 0.529600 | 1_1:-81193426 | Msa0047970:CDS |
| TACAACATTTGCAGTTGTAA+GGG | 0.533855 | 1_1:-81193574 | Msa0047970:CDS |
| ATGTTTGAGTGTCTGCAATT+GGG | 0.533964 | 1_1:+81194086 | None:intergenic |
| GATATGAACACATTGGATCC+TGG | 0.535102 | 1_1:+81192915 | None:intergenic |
| AAAAGTTGTTGTTCAAGTGA+AGG | 0.535612 | 1_1:-81196246 | Msa0047970:CDS |
| GCGGGGTTTGCAGCATGGCT+GGG | 0.538340 | 1_1:-81197645 | Msa0047970:CDS |
| TGTAAGAGTAATTCGATCAA+AGG | 0.538364 | 1_1:-81198302 | Msa0047970:CDS |
| TGAGTGTCTGCAATTGGGCA+AGG | 0.538376 | 1_1:+81194091 | None:intergenic |
| AGATAAACATCAATACCATC+AGG | 0.538763 | 1_1:+81196706 | None:intergenic |
| CAGCACTGGCTCTGATGAGA+AGG | 0.546270 | 1_1:-81192823 | Msa0047970:intron |
| TTTCCTAATTATGTCAGAAG+AGG | 0.553565 | 1_1:+81198210 | None:intergenic |
| TTCCTAATTATGTCAGAAGA+GGG | 0.553839 | 1_1:+81198211 | None:intergenic |
| TTCCGATGACCCGACACCCT+CGG | 0.556508 | 1_1:+81197526 | None:intergenic |
| ATTTGGTAGAAAACAAAGAA+TGG | 0.556601 | 1_1:-81194033 | Msa0047970:CDS |
| TATCTTCGCGGAACAATCAC+CGG | 0.558813 | 1_1:-81193872 | Msa0047970:CDS |
| CATTAGAAATCTTCTGAACA+TGG | 0.559955 | 1_1:-81191094 | Msa0047970:CDS |
| GATGTTTATCTTGACAATGT+TGG | 0.561796 | 1_1:-81196694 | Msa0047970:CDS |
| AAGATAAGTTACCTTATCAT+CGG | 0.564095 | 1_1:+81197494 | None:intergenic |
| ATTTGGTAGAAAGCAGAGAA+TGG | 0.564359 | 1_1:-81198746 | Msa0047970:CDS |
| TTAGCTGAATATTGTCCTGA+AGG | 0.566892 | 1_1:-81198720 | Msa0047970:CDS |
| TAGAAATCTTCTGAATATGG+TGG | 0.567083 | 1_1:-81196450 | Msa0047970:CDS |
| GATATGGATCAACGGAGAGA+AGG | 0.573244 | 1_1:+81193891 | None:intergenic |
| AGAAATCTTCTGAACATGGT+GGG | 0.577910 | 1_1:-81191090 | Msa0047970:CDS |
| AGAAATCTTCTGAATATGGT+GGG | 0.577910 | 1_1:-81196449 | Msa0047970:CDS |
| GTTTATCTTGACAATGTTGG+TGG | 0.579018 | 1_1:-81196691 | Msa0047970:CDS |
| CCTCAGATCATCTTAAACTC+CGG | 0.581406 | 1_1:-81198689 | Msa0047970:CDS |
| ATGGAAATATACTTACAAGA+AGG | 0.582171 | 1_1:-81196356 | Msa0047970:CDS |
| CCTAACCATGCTGCGAACCC+AGG | 0.583354 | 1_1:+81192963 | None:intergenic |
| ACCTGATTAAGTTGATATTG+TGG | 0.584585 | 1_1:+81193827 | None:intergenic |
| GGGAAAGGAAGTAAGGATGG+AGG | 0.587049 | 1_1:-81196429 | Msa0047970:CDS |
| AAGGAAAGTAAATACACTGA+AGG | 0.588385 | 1_1:-81198283 | Msa0047970:CDS |
| AGCAGCAGATATGAACACAT+TGG | 0.591491 | 1_1:+81192908 | None:intergenic |
| GAGTACCTGGGTTCGCAGCA+TGG | 0.592297 | 1_1:-81192968 | Msa0047970:CDS |
| TGTAAGGGTAATTCGATCCA+AGG | 0.592533 | 1_1:-81193559 | Msa0047970:CDS |
| AAATAATTTCAGGAGTACCT+GGG | 0.593770 | 1_1:-81192980 | Msa0047970:intron |
| AAGGATAGTAAATACAGTGA+GGG | 0.594157 | 1_1:-81193540 | Msa0047970:CDS |
| AATTACAGACTTGCTTAAAG+CGG | 0.595010 | 1_1:+81197313 | None:intergenic |
| TCTGAACATGGTGGGAAAGG+AGG | 0.598581 | 1_1:-81191082 | Msa0047970:CDS |
| GTAATAGGAGATCCAAAACC+AGG | 0.599727 | 1_1:-81197615 | Msa0047970:CDS |
| CCGGAGTTTAAGATGATCTG+AGG | 0.600515 | 1_1:+81198689 | None:intergenic |
| GGAAAGGAAGTAAGGATGGA+GGG | 0.601883 | 1_1:-81196428 | Msa0047970:CDS |
| GCCAACTTGCTAAGATCCGA+GGG | 0.602595 | 1_1:-81197542 | Msa0047970:CDS |
| TGAGATATCATTCCACAAAG+AGG | 0.604157 | 1_1:+81196619 | None:intergenic |
| GGCCAACTTGCTAAGATCCG+AGG | 0.609228 | 1_1:-81197543 | Msa0047970:CDS |
| ACCCTCGGATCTTAGCAAGT+TGG | 0.610400 | 1_1:+81197541 | None:intergenic |
| AGGATAGTAAATACAGTGAG+GGG | 0.615694 | 1_1:-81193539 | Msa0047970:CDS |
| GGAGAGAAGGAGAGTTTCAA+CGG | 0.616397 | 1_1:+81193904 | None:intergenic |
| GTTTACCTTGACAATGTTGG+TGG | 0.618276 | 1_1:-81191350 | Msa0047970:CDS |
| GTAGCTGCATACTGTCCTGA+AGG | 0.620585 | 1_1:-81194007 | Msa0047970:CDS |
| GATGTTTACCTTGACAATGT+TGG | 0.620700 | 1_1:-81191353 | Msa0047970:CDS |
| TAGGTTTGGACCGAAAGAGA+AGG | 0.627714 | 1_1:-81191117 | Msa0047970:CDS |
| TGAGATATCATCCCACAAAG+TGG | 0.634211 | 1_1:+81191278 | None:intergenic |
| GGTAAACATCAATACCATCA+GGG | 0.638329 | 1_1:+81191366 | None:intergenic |
| ATTGCATCCGAATTGGACAT+GGG | 0.640618 | 1_1:-81194058 | Msa0047970:CDS |
| TAGGTTTGGACTGAAAGAGA+AGG | 0.645087 | 1_1:-81196476 | Msa0047970:CDS |
| TAGAAATCTTCTGAACATGG+TGG | 0.647455 | 1_1:-81191091 | Msa0047970:CDS |
| GCGGAGTTTAAGATGATCCG+AGG | 0.648505 | 1_1:+81193976 | None:intergenic |
| GAACAATTGCAGGAGTAGCG+GGG | 0.654427 | 1_1:-81197662 | Msa0047970:intron |
| CAAGGATAGTAAATACAGTG+AGG | 0.660082 | 1_1:-81193541 | Msa0047970:CDS |
| TCCGCGAAGATATGGATCAA+CGG | 0.662990 | 1_1:+81193883 | None:intergenic |
| GGATAGTAAATACAGTGAGG+GGG | 0.664890 | 1_1:-81193538 | Msa0047970:CDS |
| GAATTACGACTTGCTTAAAG+CGG | 0.671434 | 1_1:+81192109 | None:intergenic |
| ACATGGTGGGAAAGGAGGTG+AGG | 0.678852 | 1_1:-81191077 | Msa0047970:CDS |
| GGTCAGCTTGCTAAGATACG+AGG | 0.707694 | 1_1:-81192861 | Msa0047970:CDS |
| ATTGGCAAGAGAAAGAGAGA+CGG | 0.714842 | 1_1:+81198665 | None:intergenic |
| CGACGGTTTCAATTACAATG+CGG | 0.732098 | 1_1:-81197351 | Msa0047970:CDS |
| GAGGAATTAGGATATGACGA+CGG | 0.738552 | 1_1:-81197368 | Msa0047970:CDS |
| CAAGAGAAAGAGAAACAGTG+CGG | 0.754469 | 1_1:+81193957 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TACAATTTTTGTTTTTTTTT+TGG | - | chr1_1:81192221-81192240 | Msa0047970:intron | 10.0% |
| !! | TCAAAGAATAAAATAAATAT+CGG | - | chr1_1:81193312-81193331 | Msa0047970:intron | 10.0% |
| !!! | TAAAAAGTTTCAATTTTATA+AGG | + | chr1_1:81194561-81194580 | None:intergenic | 10.0% |
| !! | AAACTTATTAAAATTAAGTA+AGG | + | chr1_1:81194592-81194611 | None:intergenic | 10.0% |
| !! | AAGATAAAATTAACAAAATT+TGG | - | chr1_1:81194812-81194831 | Msa0047970:intron | 10.0% |
| !!! | TATTGATATATTTTAATTGT+GGG | + | chr1_1:81195080-81195099 | None:intergenic | 10.0% |
| !! | AAATATATCAATAGTTAATA+AGG | - | chr1_1:81195087-81195106 | Msa0047970:intron | 10.0% |
| !! | TACATTTATTTATTAGAATT+AGG | - | chr1_1:81195830-81195849 | Msa0047970:intron | 10.0% |
| !! | ACATTTATTTATTAGAATTA+GGG | - | chr1_1:81195831-81195850 | Msa0047970:intron | 10.0% |
| !!! | GTATTTTTTTTAATAAAAAG+TGG | - | chr1_1:81195938-81195957 | Msa0047970:intron | 10.0% |
| !! | ATATATATATATATATTTGC+AGG | - | chr1_1:81196034-81196053 | Msa0047970:intron | 10.0% |
| !!! | TTTTATTCAATTAGTTTAAA+AGG | - | chr1_1:81196324-81196343 | Msa0047970:CDS | 10.0% |
| !! | TAAAATGAAATTTGTATTTA+AGG | - | chr1_1:81196577-81196596 | Msa0047970:intron | 10.0% |
| !! | TATTATATAAAGAAAATAAG+TGG | + | chr1_1:81196851-81196870 | None:intergenic | 10.0% |
| !!! | CTTATTTTCTTTATATAATA+TGG | - | chr1_1:81196851-81196870 | Msa0047970:intron | 10.0% |
| !!! | AAATTTTTGAAGTATAAAAT+TGG | - | chr1_1:81197863-81197882 | Msa0047970:intron | 10.0% |
| !!! | AATTTTTGAAGTATAAAATT+GGG | - | chr1_1:81197864-81197883 | Msa0047970:intron | 10.0% |
| !!! | TTTTTATGTGAAATTTTATA+GGG | + | chr1_1:81198142-81198161 | None:intergenic | 10.0% |
| !!! | ATTAGAAAATTGAAATTTTT+GGG | + | chr1_1:81198474-81198493 | None:intergenic | 10.0% |
| !!! | AATTAGAAAATTGAAATTTT+TGG | + | chr1_1:81198475-81198494 | None:intergenic | 10.0% |
| !! | TAATATGAATATATATTTGC+AGG | - | chr1_1:81191288-81191307 | Msa0047970:CDS | 15.0% |
| !!! | AATTTTTATCAAAATCACAA+TGG | - | chr1_1:81191609-81191628 | Msa0047970:intron | 15.0% |
| !!! | ATAAAACGCTTAATAATTTT+TGG | - | chr1_1:81191839-81191858 | Msa0047970:intron | 15.0% |
| !!! | TGTTTTTTTTTTGGTTTTTT+AGG | - | chr1_1:81192230-81192249 | Msa0047970:intron | 15.0% |
| !! | TTTATACAACAATATCTAAA+AGG | + | chr1_1:81192376-81192395 | None:intergenic | 15.0% |
| !!! | TTTTAGATATTGTTGTATAA+AGG | - | chr1_1:81192375-81192394 | Msa0047970:intron | 15.0% |
| !!! | AAATCAATGCTTTTTTTTTT+TGG | + | chr1_1:81193114-81193133 | None:intergenic | 15.0% |
| !! | TCTAATTATAGTTATAATGT+TGG | - | chr1_1:81193134-81193153 | Msa0047970:intron | 15.0% |
| !!! | AATTGAATAAGTTTGAAATT+TGG | + | chr1_1:81194300-81194319 | None:intergenic | 15.0% |
| !! | TTTCAAACTTATTCAATTTA+AGG | - | chr1_1:81194302-81194321 | Msa0047970:intron | 15.0% |
| !! | TTCAAACTTATTCAATTTAA+GGG | - | chr1_1:81194303-81194322 | Msa0047970:intron | 15.0% |
| !! | AATTAAACAAATTTGAATTG+AGG | - | chr1_1:81194939-81194958 | Msa0047970:intron | 15.0% |
| !! | AGAACTATTAAAATTATGTA+AGG | - | chr1_1:81195006-81195025 | Msa0047970:intron | 15.0% |
| !!! | CTATTGATATATTTTAATTG+TGG | + | chr1_1:81195081-81195100 | None:intergenic | 15.0% |
| !! | ATTTAATCAGTGTTAATTAA+TGG | - | chr1_1:81195264-81195283 | Msa0047970:intron | 15.0% |
| !! | TTTAATCAGTGTTAATTAAT+GGG | - | chr1_1:81195265-81195284 | Msa0047970:intron | 15.0% |
| !! | ATTAACAAATATTTGAATAC+AGG | - | chr1_1:81195291-81195310 | Msa0047970:intron | 15.0% |
| !! | TTTCTAATTATATGAAAAGA+AGG | + | chr1_1:81196170-81196189 | None:intergenic | 15.0% |
| !! | AAAAAAATACTCATATTTGA+TGG | - | chr1_1:81196532-81196551 | Msa0047970:intron | 15.0% |
| !!! | ATTTCTAAAAAAAAATTGGT+GGG | - | chr1_1:81197633-81197652 | Msa0047970:CDS | 15.0% |
| !!! | TCATTTAACGTTTTTTAAAT+CGG | + | chr1_1:81197719-81197738 | None:intergenic | 15.0% |
| !!! | ATTTTTGAAGTATAAAATTG+GGG | - | chr1_1:81197865-81197884 | Msa0047970:intron | 15.0% |
| !!! | CTTTTTATGTGAAATTTTAT+AGG | + | chr1_1:81198143-81198162 | None:intergenic | 15.0% |
| !! | TTAGTAAATTGTTATAATGT+TGG | - | chr1_1:81198493-81198512 | Msa0047970:intron | 15.0% |
| !!! | TGTTTAACTTGAAAAAATCA+CGG | - | chr1_1:81191553-81191572 | Msa0047970:intron | 20.0% |
| !!! | TTTAGATCATATGTTGTTTT+TGG | - | chr1_1:81192468-81192487 | Msa0047970:intron | 20.0% |
| !! | AAAATGATATATATAGCGAA+AGG | + | chr1_1:81192787-81192806 | None:intergenic | 20.0% |
| !! | TACTTCAAAATTTAGTGTAA+TGG | + | chr1_1:81192810-81192829 | None:intergenic | 20.0% |
| !! | AATGATATCTCAATATAATC+AGG | - | chr1_1:81193027-81193046 | Msa0047970:intron | 20.0% |
| !! | TATAGTTATAATGTTGGTAT+AGG | - | chr1_1:81193140-81193159 | Msa0047970:intron | 20.0% |
| !!! | TTTTATGCTAGAATCATATT+GGG | - | chr1_1:81193230-81193249 | Msa0047970:intron | 20.0% |
| !! | TAAGTATATTTCCATATCTT+TGG | + | chr1_1:81193274-81193293 | None:intergenic | 20.0% |
| !! | AATTATATTATTCCACTTGT+AGG | - | chr1_1:81193501-81193520 | Msa0047970:CDS | 20.0% |
| !! | ATTATATTATTCCACTTGTA+GGG | - | chr1_1:81193502-81193521 | Msa0047970:CDS | 20.0% |
| !! | AATAGCACTTAAAATATTGA+GGG | - | chr1_1:81194121-81194140 | Msa0047970:intron | 20.0% |
| !! | AATAGCACTTAAAATATTGA+GGG | - | chr1_1:81194121-81194140 | Msa0047970:intron | 20.0% |
| !! | AAAAAATTGTCGTAATTTAG+TGG | + | chr1_1:81194340-81194359 | None:intergenic | 20.0% |
| !!! | TAGAAGTAATTTTTTTTGCA+GGG | + | chr1_1:81194621-81194640 | None:intergenic | 20.0% |
| !!! | TTAGAAGTAATTTTTTTTGC+AGG | + | chr1_1:81194622-81194641 | None:intergenic | 20.0% |
| !!! | AACAAACTTTGTTTTTAACA+GGG | + | chr1_1:81194652-81194671 | None:intergenic | 20.0% |
| !!! | AAACAAACTTTGTTTTTAAC+AGG | + | chr1_1:81194653-81194672 | None:intergenic | 20.0% |
| !! | TTAATCAGTGTTAATTAATG+GGG | - | chr1_1:81195266-81195285 | Msa0047970:intron | 20.0% |
| !! | ATTTCACTATCAAATTATCT+CGG | - | chr1_1:81196209-81196228 | Msa0047970:intron | 20.0% |
| !! | TTACAAAACAAAATTTCATG+AGG | + | chr1_1:81196894-81196913 | None:intergenic | 20.0% |
| !! | CTAAAGAAATGATAAAAACT+TGG | + | chr1_1:81196927-81196946 | None:intergenic | 20.0% |
| !! | TTATTTATTTCGATGCTAAT+AGG | + | chr1_1:81197008-81197027 | None:intergenic | 20.0% |
| !!! | TTTTGTGATTAAAATAGAGA+GGG | + | chr1_1:81197098-81197117 | None:intergenic | 20.0% |
| !! | AAAAAGATAGCTAATACATT+TGG | + | chr1_1:81197121-81197140 | None:intergenic | 20.0% |
| !!! | TTAAGTTTTTGTTTTGTGTT+CGG | - | chr1_1:81197154-81197173 | Msa0047970:intron | 20.0% |
| !! | AAGAATACATAAAGAGAAAA+AGG | + | chr1_1:81197554-81197573 | None:intergenic | 20.0% |
| !!! | CTCCATTTCTAAAAAAAAAT+TGG | - | chr1_1:81197629-81197648 | Msa0047970:CDS | 20.0% |
| !!! | CACCAATTTTTTTTTAGAAA+TGG | + | chr1_1:81197634-81197653 | None:intergenic | 20.0% |
| !!! | CATTTCTAAAAAAAAATTGG+TGG | - | chr1_1:81197632-81197651 | Msa0047970:CDS | 20.0% |
| !!! | TTTCTAAAAAAAAATTGGTG+GGG | - | chr1_1:81197634-81197653 | Msa0047970:CDS | 20.0% |
| !! | TTGATTTATAAAGTTCTTTC+CGG | + | chr1_1:81197691-81197710 | None:intergenic | 20.0% |
| !! | TTGCAATTTATCTGTATTTA+TGG | - | chr1_1:81198068-81198087 | Msa0047970:intron | 20.0% |
| !! | GATGATATCTCAATATAATA+AGG | - | chr1_1:81198368-81198387 | Msa0047970:intron | 20.0% |
| !! | AATTGTTATAATGTTGGTAT+AGG | - | chr1_1:81198499-81198518 | Msa0047970:intron | 20.0% |
| ! | TCGTATGTATATGCATATAT+TGG | - | chr1_1:81191249-81191268 | Msa0047970:intron | 25.0% |
| ! | TGCAAACTTAATTCTCTATA+GGG | + | chr1_1:81191533-81191552 | None:intergenic | 25.0% |
| ! | ATGCAAACTTAATTCTCTAT+AGG | + | chr1_1:81191534-81191553 | None:intergenic | 25.0% |
| ! | GTTTAAATTCTATATGAGGT+TGG | + | chr1_1:81191658-81191677 | None:intergenic | 25.0% |
| ! | CTAGGTTTAAATTCTATATG+AGG | + | chr1_1:81191662-81191681 | None:intergenic | 25.0% |
| !!! | TTCTAGAAGTACTTATAAAC+AGG | + | chr1_1:81191724-81191743 | None:intergenic | 25.0% |
| ! | TTAATTAGTTGAACAATTGC+AGG | - | chr1_1:81191963-81191982 | Msa0047970:intron | 25.0% |
| ! | AAGATAAGTTACCTTATCAT+CGG | + | chr1_1:81192144-81192163 | None:intergenic | 25.0% |
| ! | CATACATACATTACAAGAAA+AGG | + | chr1_1:81192172-81192191 | None:intergenic | 25.0% |
| ! | AAACTCATTAAAGAGGAATT+AGG | - | chr1_1:81192255-81192274 | Msa0047970:intron | 25.0% |
| !!! | TTTTAAAAAAACCCGAGTTT+AGG | + | chr1_1:81192494-81192513 | None:intergenic | 25.0% |
| ! | GCTCTTTAGTAATTTACATT+TGG | + | chr1_1:81192600-81192619 | None:intergenic | 25.0% |
| ! | GAACTGTAAATTACTTTACA+CGG | + | chr1_1:81192678-81192697 | None:intergenic | 25.0% |
| ! | TTTATGTCATGAATCTTTCT+AGG | + | chr1_1:81192843-81192862 | None:intergenic | 25.0% |
| !! | TATATAGACTAGAATTTTGC+AGG | - | chr1_1:81192900-81192919 | Msa0047970:CDS | 25.0% |
| ! | TTATAATGTTGGTATAGGTT+TGG | - | chr1_1:81193145-81193164 | Msa0047970:intron | 25.0% |
| ! | CATTAGAAATCTTCTGAATA+TGG | - | chr1_1:81193182-81193201 | Msa0047970:intron | 25.0% |
| !! | GTTTTATGCTAGAATCATAT+TGG | - | chr1_1:81193229-81193248 | Msa0047970:intron | 25.0% |
| ! | ATGGAAATATACTTACAAGA+AGG | - | chr1_1:81193279-81193298 | Msa0047970:intron | 25.0% |
| ! | ATATACAATATTTGGACACT+AGG | + | chr1_1:81193415-81193434 | None:intergenic | 25.0% |
| ! | GATCAAGCATATACAATATT+TGG | + | chr1_1:81193423-81193442 | None:intergenic | 25.0% |
| ! | TTATATTATTCCACTTGTAG+GGG | - | chr1_1:81193503-81193522 | Msa0047970:CDS | 25.0% |
| !!! | ATTTTTTCGAAACTAACTCT+GGG | + | chr1_1:81193653-81193672 | None:intergenic | 25.0% |
| ! | AAAATCTTGACACTATTAGA+AGG | - | chr1_1:81193668-81193687 | Msa0047970:intron | 25.0% |
| ! | ATATAAACCTGAAGTTTAAG+AGG | + | chr1_1:81193885-81193904 | None:intergenic | 25.0% |
| !!! | CTCAATATTTTAAGTGCTAT+TGG | + | chr1_1:81194122-81194141 | None:intergenic | 25.0% |
| ! | CAATAGCACTTAAAATATTG+AGG | - | chr1_1:81194120-81194139 | Msa0047970:intron | 25.0% |
| ! | GAATAGCACTTAAAATATTG+AGG | - | chr1_1:81194143-81194162 | Msa0047970:intron | 25.0% |
| ! | ATAGCACTTAAAATATTGAG+GGG | - | chr1_1:81194122-81194141 | Msa0047970:intron | 25.0% |
| !! | AACTTATTATTTTCCACTCT+CGG | - | chr1_1:81194500-81194519 | Msa0047970:intron | 25.0% |
| ! | TCTCGGTTTATAACAAATAA+AGG | - | chr1_1:81194517-81194536 | Msa0047970:intron | 25.0% |
| ! | CTCGGTTTATAACAAATAAA+GGG | - | chr1_1:81194518-81194537 | Msa0047970:intron | 25.0% |
| ! | TAAAGGGTTAAATATGTTTC+TGG | - | chr1_1:81194534-81194553 | Msa0047970:intron | 25.0% |
| !! | CAAGTTTAAAACACTATGAA+AGG | - | chr1_1:81194716-81194735 | Msa0047970:intron | 25.0% |
| ! | TAAACAAATTTGAATTGAGG+AGG | - | chr1_1:81194942-81194961 | Msa0047970:intron | 25.0% |
| ! | AAACAAATTTGAATTGAGGA+GGG | - | chr1_1:81194943-81194962 | Msa0047970:intron | 25.0% |
| ! | AGTGCAGAAAAAAAAAGATT+AGG | - | chr1_1:81194976-81194995 | Msa0047970:intron | 25.0% |
| ! | GTGCAGAAAAAAAAAGATTA+GGG | - | chr1_1:81194977-81194996 | Msa0047970:intron | 25.0% |
| ! | ATGTAAGGACTAAACTTAAA+AGG | - | chr1_1:81195021-81195040 | Msa0047970:intron | 25.0% |
| !! | TTAAAAGGTCCCAATTTTAT+AGG | - | chr1_1:81195036-81195055 | Msa0047970:intron | 25.0% |
| !! | TAAAAGGTCCCAATTTTATA+GGG | - | chr1_1:81195037-81195056 | Msa0047970:intron | 25.0% |
| !!! | TTTTTGGTCCCTATAAAATT+GGG | + | chr1_1:81195048-81195067 | None:intergenic | 25.0% |
| !!! | TTGTGGGTTAAATATGTTTT+TGG | + | chr1_1:81195064-81195083 | None:intergenic | 25.0% |
| ! | GACAATTATAATGAGATATG+AGG | - | chr1_1:81195175-81195194 | Msa0047970:intron | 25.0% |
| !!! | TAGTGGTATGTTTAATTTGT+TGG | - | chr1_1:81195331-81195350 | Msa0047970:intron | 25.0% |
| ! | TAAAGTGCATCAATTCATTT+GGG | + | chr1_1:81195363-81195382 | None:intergenic | 25.0% |
| ! | TTAAAGTGCATCAATTCATT+TGG | + | chr1_1:81195364-81195383 | None:intergenic | 25.0% |
| ! | ATTTGGTAGAAAACAAAGAA+TGG | - | chr1_1:81195602-81195621 | Msa0047970:intron | 25.0% |
| ! | GTTGATATTGTGGAATAAAA+AGG | + | chr1_1:81195801-81195820 | None:intergenic | 25.0% |
| !! | ATACTTTTGTAGTATTAACG+TGG | - | chr1_1:81196484-81196503 | Msa0047970:intron | 25.0% |
| !! | TACTTTTGTAGTATTAACGT+GGG | - | chr1_1:81196485-81196504 | Msa0047970:intron | 25.0% |
| ! | TATAAGAATATCCACAACAA+TGG | - | chr1_1:81196971-81196990 | Msa0047970:intron | 25.0% |
| ! | TAAATAAGTACCTCTCATTA+TGG | - | chr1_1:81197021-81197040 | Msa0047970:intron | 25.0% |
| !! | GTTTTGTGATTAAAATAGAG+AGG | + | chr1_1:81197099-81197118 | None:intergenic | 25.0% |
| !!! | TCGTATACATATTTTTTGCA+TGG | - | chr1_1:81197243-81197262 | Msa0047970:intron | 25.0% |
| ! | TTTGCATGGATAATTATCTT+TGG | - | chr1_1:81197257-81197276 | Msa0047970:intron | 25.0% |
| ! | TGCCAATATTATATTTCGAT+CGG | - | chr1_1:81197344-81197363 | Msa0047970:CDS | 25.0% |
| ! | ATCCGATCGAAATATAATAT+TGG | + | chr1_1:81197349-81197368 | None:intergenic | 25.0% |
| ! | TATTATATTTCGATCGGATT+TGG | - | chr1_1:81197350-81197369 | Msa0047970:CDS | 25.0% |
| ! | AACTATCATTCACTTCAAAA+TGG | + | chr1_1:81197752-81197771 | None:intergenic | 25.0% |
| !! | TTGCAATTTGTTTGCATTTA+GGG | + | chr1_1:81197938-81197957 | None:intergenic | 25.0% |
| !! | TTTGCAATTTGTTTGCATTT+AGG | + | chr1_1:81197939-81197958 | None:intergenic | 25.0% |
| !! | TATTTTCACTAGAATTTTGC+AGG | - | chr1_1:81198241-81198260 | Msa0047970:CDS | 25.0% |
| ! | TCAATATAATAAGGTGAATG+AGG | - | chr1_1:81198377-81198396 | Msa0047970:intron | 25.0% |
| ! | CAATATAATAAGGTGAATGA+GGG | - | chr1_1:81198378-81198397 | Msa0047970:intron | 25.0% |
| !!! | TTGAAATTTTTGGGCATTTT+TGG | + | chr1_1:81198465-81198484 | None:intergenic | 25.0% |
| ! | TTATAATGTTGGTATAGGTT+TGG | - | chr1_1:81193145-81193164 | Msa0047970:intron | 25.0% |
| !! | AAATCATATTTGCATCGTTT+TGG | - | chr1_1:81198599-81198618 | Msa0047970:intron | 25.0% |
| ! | CCAAAGAGTAAAATCAATAT+CGG | - | chr1_1:81198671-81198690 | Msa0047970:CDS | 25.0% |
| !! | AAAAGTTGTTGTTCAAGTTA+AGG | - | chr1_1:81198748-81198767 | Msa0047970:CDS | 25.0% |
| TCTCAAATTGTGGCATATAA+AGG | + | chr1_1:81191088-81191107 | None:intergenic | 30.0% | |
| ACCTGATTAATCTCAAATTG+TGG | + | chr1_1:81191098-81191117 | None:intergenic | 30.0% | |
| TGTAAGAGTAATTCGATCAA+AGG | - | chr1_1:81191333-81191352 | Msa0047970:CDS | 30.0% | |
| AAGGAAAGTAAATACACTGA+AGG | - | chr1_1:81191352-81191371 | Msa0047970:CDS | 30.0% | |
| ! | AAGGAGATATCCTTTTGAAT+GGG | - | chr1_1:81191371-81191390 | Msa0047970:CDS | 30.0% |
| TTCCTAATTATGTCAGAAGA+GGG | + | chr1_1:81191427-81191446 | None:intergenic | 30.0% | |
| TTTCCTAATTATGTCAGAAG+AGG | + | chr1_1:81191428-81191447 | None:intergenic | 30.0% | |
| !!! | CAGTAGTTTTTTAAGGAACA+GGG | + | chr1_1:81191694-81191713 | None:intergenic | 30.0% |
| TTAGGTGAAACTCATTAAAG+AGG | - | chr1_1:81192248-81192267 | Msa0047970:intron | 30.0% | |
| ! | AATTACAGACTTGCTTAAAG+CGG | + | chr1_1:81192325-81192344 | None:intergenic | 30.0% |
| AGATATTGTTGTATAAAGGC+AGG | - | chr1_1:81192379-81192398 | Msa0047970:intron | 30.0% | |
| GATATTGTTGTATAAAGGCA+GGG | - | chr1_1:81192380-81192399 | Msa0047970:intron | 30.0% | |
| AATACGTTAACGTAAAACGT+TGG | - | chr1_1:81192512-81192531 | Msa0047970:intron | 30.0% | |
| ! | GTAACTAAAGCAATGGTTTT+AGG | + | chr1_1:81192542-81192561 | None:intergenic | 30.0% |
| ACCATTGCTTTAGTTACATA+AGG | - | chr1_1:81192545-81192564 | Msa0047970:intron | 30.0% | |
| TCCTTATGTAACTAAAGCAA+TGG | + | chr1_1:81192549-81192568 | None:intergenic | 30.0% | |
| TGCTTTAGTTACATAAGGAT+TGG | - | chr1_1:81192550-81192569 | Msa0047970:intron | 30.0% | |
| ! | TTGGTAAGTTGCTTTATACA+GGG | + | chr1_1:81192581-81192600 | None:intergenic | 30.0% |
| ! | TTTGGTAAGTTGCTTTATAC+AGG | + | chr1_1:81192582-81192601 | None:intergenic | 30.0% |
| AGATAAACATCAATACCATC+AGG | + | chr1_1:81192932-81192951 | None:intergenic | 30.0% | |
| GATGTTTATCTTGACAATGT+TGG | - | chr1_1:81192941-81192960 | Msa0047970:CDS | 30.0% | |
| TAGAAATCTTCTGAATATGG+TGG | - | chr1_1:81193185-81193204 | Msa0047970:intron | 30.0% | |
| AGAAATCTTCTGAATATGGT+GGG | - | chr1_1:81193186-81193205 | Msa0047970:intron | 30.0% | |
| ! | AACAACAACTTTTCCAATGT+TGG | + | chr1_1:81193382-81193401 | None:intergenic | 30.0% |
| ! | AAAAGTTGTTGTTCAAGTGA+AGG | - | chr1_1:81193389-81193408 | Msa0047970:intron | 30.0% |
| TATATTATTCCACTTGTAGG+GGG | - | chr1_1:81193504-81193523 | Msa0047970:CDS | 30.0% | |
| !!! | TTTTTTCGAAACTAACTCTG+GGG | + | chr1_1:81193652-81193671 | None:intergenic | 30.0% |
| !!! | GATTTTTTCGAAACTAACTC+TGG | + | chr1_1:81193654-81193673 | None:intergenic | 30.0% |
| TAGCACTTAAAATATTGAGG+GGG | - | chr1_1:81194123-81194142 | Msa0047970:intron | 30.0% | |
| CAATTTAAAAAATTGCCCCT+AGG | + | chr1_1:81194181-81194200 | None:intergenic | 30.0% | |
| TATTCTCACGGAAACTTTAA+CGG | + | chr1_1:81194226-81194245 | None:intergenic | 30.0% | |
| ! | AGACATCACATTTTATACGT+AGG | - | chr1_1:81194259-81194278 | Msa0047970:intron | 30.0% |
| ! | GACATCACATTTTATACGTA+GGG | - | chr1_1:81194260-81194279 | Msa0047970:intron | 30.0% |
| !! | TATTTGTTATAAACCGAGAG+TGG | + | chr1_1:81194516-81194535 | None:intergenic | 30.0% |
| !!! | GTTTTTGGTCCCTATAAAAT+TGG | + | chr1_1:81195049-81195068 | None:intergenic | 30.0% |
| ! | ACAAGTGATATTTTCTTGTG+TGG | + | chr1_1:81195231-81195250 | None:intergenic | 30.0% |
| ATTAAACATACCACTAACCT+TGG | + | chr1_1:81195327-81195346 | None:intergenic | 30.0% | |
| AACCACACTAATCATCATTT+GGG | + | chr1_1:81195441-81195460 | None:intergenic | 30.0% | |
| AAACCACACTAATCATCATT+TGG | + | chr1_1:81195442-81195461 | None:intergenic | 30.0% | |
| ATGATGATTAGTGTGGTTTA+AGG | - | chr1_1:81195443-81195462 | Msa0047970:intron | 30.0% | |
| !! | GTAGCAAAGTATTGTGTAAA+AGG | + | chr1_1:81195489-81195508 | None:intergenic | 30.0% |
| AAGGCTTGTCTATGATATAT+AGG | + | chr1_1:81195528-81195547 | None:intergenic | 30.0% | |
| TCCACAATATCAACTTAATC+AGG | - | chr1_1:81195807-81195826 | Msa0047970:intron | 30.0% | |
| !! | ACCTGATTAAGTTGATATTG+TGG | + | chr1_1:81195811-81195830 | None:intergenic | 30.0% |
| TTACAACATTTGCAGTTGTA+AGG | - | chr1_1:81196060-81196079 | Msa0047970:intron | 30.0% | |
| TACAACATTTGCAGTTGTAA+GGG | - | chr1_1:81196061-81196080 | Msa0047970:intron | 30.0% | |
| AAGGATAGTAAATACAGTGA+GGG | - | chr1_1:81196095-81196114 | Msa0047970:intron | 30.0% | |
| ! | GATATCCTTTTGAATGGATA+TGG | - | chr1_1:81196119-81196138 | Msa0047970:intron | 30.0% |
| AGAAAAATTGATCCTGCTAA+TGG | - | chr1_1:81196185-81196204 | Msa0047970:intron | 30.0% | |
| GAAAAATTGATCCTGCTAAT+GGG | - | chr1_1:81196186-81196205 | Msa0047970:intron | 30.0% | |
| TCAAATTATCTCGGTTCTTT+AGG | - | chr1_1:81196218-81196237 | Msa0047970:intron | 30.0% | |
| !! | TAAATAATTTCAGGAGTACC+TGG | - | chr1_1:81196654-81196673 | Msa0047970:CDS | 30.0% |
| !! | AAATAATTTCAGGAGTACCT+GGG | - | chr1_1:81196655-81196674 | Msa0047970:CDS | 30.0% |
| CATTATGGAGAGAAAACATT+TGG | - | chr1_1:81197036-81197055 | Msa0047970:intron | 30.0% | |
| ! | AAGCTCATCAAAGAGAATTT+TGG | - | chr1_1:81197459-81197478 | Msa0047970:intron | 30.0% |
| ! | GAGAATTTTGGATATGATGA+TGG | - | chr1_1:81197471-81197490 | Msa0047970:intron | 30.0% |
| TAAAAAAAAATTGGTGGGGT+GGG | - | chr1_1:81197638-81197657 | Msa0047970:CDS | 30.0% | |
| AACTATGGTCATTTACTCAA+TGG | + | chr1_1:81197780-81197799 | None:intergenic | 30.0% | |
| ! | GTTGTTTAAGATTGCTCTTT+AGG | + | chr1_1:81197825-81197844 | None:intergenic | 30.0% |
| ATTTCTAATGCCTTCTCTTT+CGG | + | chr1_1:81193172-81193191 | None:intergenic | 30.0% | |
| CATTAGAAATCTTCTGAACA+TGG | - | chr1_1:81198541-81198560 | Msa0047970:intron | 30.0% | |
| ! | TGGAGATTTTGTCAAAGATA+TGG | - | chr1_1:81198619-81198638 | Msa0047970:intron | 30.0% |
| ATGGAAAAATACTTGCAAGA+AGG | - | chr1_1:81198638-81198657 | Msa0047970:CDS | 30.0% | |
| !!! | CCGATATTGATTTTACTCTT+TGG | + | chr1_1:81198674-81198693 | None:intergenic | 30.0% |
| ! | TATCGGAATTGAGAACTTTT+TGG | - | chr1_1:81198688-81198707 | Msa0047970:CDS | 30.0% |
| !!! | GTTTTCTCTAGTTCTAACAT+TGG | - | chr1_1:81198725-81198744 | Msa0047970:CDS | 30.0% |
| ATTTGGTAGAAAGCAGAGAA+TGG | - | chr1_1:81190889-81190908 | Msa0047970:CDS | 35.0% | |
| TTAGCTGAATATTGTCCTGA+AGG | - | chr1_1:81190915-81190934 | Msa0047970:CDS | 35.0% | |
| ! | AGTTTAAGATGATCTGAGGT+TGG | + | chr1_1:81190945-81190964 | None:intergenic | 35.0% |
| ! | GTTATCTGGGATTGAATCAT+TGG | + | chr1_1:81190991-81191010 | None:intergenic | 35.0% |
| ! | GCCACAATTTGAGATTAATC+AGG | - | chr1_1:81191094-81191113 | Msa0047970:CDS | 35.0% |
| ! | GAAGGAGATATCCTTTTGAA+TGG | - | chr1_1:81191370-81191389 | Msa0047970:CDS | 35.0% |
| ! | GATATCCTTTTGAATGGGAA+TGG | - | chr1_1:81191376-81191395 | Msa0047970:intron | 35.0% |
| TACCCTCTTCTGACATAATT+AGG | - | chr1_1:81191422-81191441 | Msa0047970:intron | 35.0% | |
| AGGAAAATTGATCCTGCTAA+TGG | - | chr1_1:81191442-81191461 | Msa0047970:intron | 35.0% | |
| GGAAAATTGATCCTGCTAAT+GGG | - | chr1_1:81191443-81191462 | Msa0047970:intron | 35.0% | |
| ATTTCACTGTCGGATTATCT+TGG | - | chr1_1:81191466-81191485 | Msa0047970:intron | 35.0% | |
| TCGGATTATCTTGGTACTTT+AGG | - | chr1_1:81191475-81191494 | Msa0047970:intron | 35.0% | |
| !!! | GCAGTAGTTTTTTAAGGAAC+AGG | + | chr1_1:81191695-81191714 | None:intergenic | 35.0% |
| AGTACTTATAAACAGGACCA+GGG | + | chr1_1:81191717-81191736 | None:intergenic | 35.0% | |
| AAGTACTTATAAACAGGACC+AGG | + | chr1_1:81191718-81191737 | None:intergenic | 35.0% | |
| !! | ATACAAAAGTGCTTATGCTC+AGG | + | chr1_1:81191794-81191813 | None:intergenic | 35.0% |
| CTCTAGTAACAATGAGATTG+AGG | + | chr1_1:81192432-81192451 | None:intergenic | 35.0% | |
| CTCAATCTCATTGTTACTAG+AGG | - | chr1_1:81192430-81192449 | Msa0047970:intron | 35.0% | |
| !!! | TGTTGTTTTTGGCCTAAACT+CGG | - | chr1_1:81192479-81192498 | Msa0047970:intron | 35.0% |
| ! | CCATGAATTCGCATGATTTT+TGG | + | chr1_1:81192700-81192719 | None:intergenic | 35.0% |
| CCAAAAATCATGCGAATTCA+TGG | - | chr1_1:81192697-81192716 | Msa0047970:intron | 35.0% | |
| ! | TTTTGCAGGTATTTTCCTGA+TGG | - | chr1_1:81192914-81192933 | Msa0047970:CDS | 35.0% |
| GTTTATCTTGACAATGTTGG+TGG | - | chr1_1:81192944-81192963 | Msa0047970:CDS | 35.0% | |
| TGAGATATCATTCCACAAAG+AGG | + | chr1_1:81193019-81193038 | None:intergenic | 35.0% | |
| TCAATATAATCAGGTGAGCA+CGG | - | chr1_1:81193036-81193055 | Msa0047970:intron | 35.0% | |
| ! | GAATCATATTGGGATCGTTT+TGG | - | chr1_1:81193240-81193259 | Msa0047970:intron | 35.0% |
| ! | TGGAGATTTTGCCAAAGATA+TGG | - | chr1_1:81193260-81193279 | Msa0047970:intron | 35.0% |
| ! | TATCGGAATTGAGTGCTTTT+TGG | - | chr1_1:81193329-81193348 | Msa0047970:intron | 35.0% |
| AATGTTGGAGCTAGAGAATA+AGG | + | chr1_1:81193367-81193386 | None:intergenic | 35.0% | |
| ! | TTATTCTCTAGCTCCAACAT+TGG | - | chr1_1:81193366-81193385 | Msa0047970:intron | 35.0% |
| ATTTCCCCTGATCTCAATTT+CGG | + | chr1_1:81193571-81193590 | None:intergenic | 35.0% | |
| ! | TATCCCTCTTGTCTATTTCT+TGG | - | chr1_1:81193710-81193729 | Msa0047970:intron | 35.0% |
| ACCACTAAATTTACCATGAC+AGG | - | chr1_1:81193742-81193761 | Msa0047970:intron | 35.0% | |
| TCCTGTCATGGTAAATTTAG+TGG | + | chr1_1:81193746-81193765 | None:intergenic | 35.0% | |
| GGAAAATGCAATAGCTAACT+TGG | + | chr1_1:81193773-81193792 | None:intergenic | 35.0% | |
| CAAAACTTCAAAACAGGGTT+AGG | + | chr1_1:81193794-81193813 | None:intergenic | 35.0% | |
| !!! | CTAACCCTGTTTTGAAGTTT+TGG | - | chr1_1:81193792-81193811 | Msa0047970:intron | 35.0% |
| CATGCCAAAACTTCAAAACA+GGG | + | chr1_1:81193799-81193818 | None:intergenic | 35.0% | |
| TCATGCCAAAACTTCAAAAC+AGG | + | chr1_1:81193800-81193819 | None:intergenic | 35.0% | |
| ACTAGAATAGAGTCGTGAAT+CGG | - | chr1_1:81194011-81194030 | Msa0047970:CDS | 35.0% | |
| CCTACTAGAAACATAGAGTT+TGG | + | chr1_1:81194077-81194096 | None:intergenic | 35.0% | |
| !! | CCAAACTCTATGTTTCTAGT+AGG | - | chr1_1:81194074-81194093 | Msa0047970:CDS | 35.0% |
| GTAGGTTCATCTAATGAAAC+AGG | - | chr1_1:81194092-81194111 | Msa0047970:CDS | 35.0% | |
| AAAAAATTGCCCCTAGGTAA+TGG | + | chr1_1:81194175-81194194 | None:intergenic | 35.0% | |
| ! | TCACATTTTATACGTAGGGT+CGG | - | chr1_1:81194264-81194283 | Msa0047970:intron | 35.0% |
| ! | ATTGAGAGTGACACTCTTTT+TGG | + | chr1_1:81194427-81194446 | None:intergenic | 35.0% |
| AAGTTGAGTGTGATGATCAT+AGG | + | chr1_1:81194485-81194504 | None:intergenic | 35.0% | |
| !!! | TTGCGACAATTTTTTTGCAG+AGG | - | chr1_1:81194851-81194870 | Msa0047970:intron | 35.0% |
| AACAAACATACCACTAACCT+TGG | + | chr1_1:81195410-81195429 | None:intergenic | 35.0% | |
| AAGGTTAGTGGTATGTTTGT+TGG | - | chr1_1:81195409-81195428 | Msa0047970:intron | 35.0% | |
| ATGTTTGAGTGTCTGCAATT+GGG | + | chr1_1:81195552-81195571 | None:intergenic | 35.0% | |
| AATGTTTGAGTGTCTGCAAT+TGG | + | chr1_1:81195553-81195572 | None:intergenic | 35.0% | |
| TGGAATAAAAAGGCCTTCAA+GGG | + | chr1_1:81195791-81195810 | None:intergenic | 35.0% | |
| CTCACTGTATTTACTATCCT+TGG | + | chr1_1:81196096-81196115 | None:intergenic | 35.0% | |
| CAAGGATAGTAAATACAGTG+AGG | - | chr1_1:81196094-81196113 | Msa0047970:intron | 35.0% | |
| AGGATAGTAAATACAGTGAG+GGG | - | chr1_1:81196096-81196115 | Msa0047970:intron | 35.0% | |
| AAGAATATCCACAACAATGG+TGG | - | chr1_1:81196974-81196993 | Msa0047970:intron | 35.0% | |
| AGAATATCCACAACAATGGT+GGG | - | chr1_1:81196975-81196994 | Msa0047970:intron | 35.0% | |
| ! | TGTTTTCTCTCCATAATGAG+AGG | + | chr1_1:81197034-81197053 | None:intergenic | 35.0% |
| CTTACAACTTGAAACATACC+TGG | - | chr1_1:81197421-81197440 | Msa0047970:intron | 35.0% | |
| ! | GAATTACGACTTGCTTAAAG+CGG | + | chr1_1:81197529-81197548 | None:intergenic | 35.0% |
| CTAAAAAAAAATTGGTGGGG+TGG | - | chr1_1:81197637-81197656 | Msa0047970:CDS | 35.0% | |
| AAAAAAAAATTGGTGGGGTG+GGG | - | chr1_1:81197639-81197658 | Msa0047970:CDS | 35.0% | |
| TAGTTCATCCAAATTGACAC+CGG | - | chr1_1:81197669-81197688 | Msa0047970:intron | 35.0% | |
| CAATTGCACACAAACAACTA+TGG | + | chr1_1:81197795-81197814 | None:intergenic | 35.0% | |
| ! | TAGTCACTTTAGTCCTTGAA+TGG | - | chr1_1:81197891-81197910 | Msa0047970:intron | 35.0% |
| ! | AGTCACTTTAGTCCTTGAAT+GGG | - | chr1_1:81197892-81197911 | Msa0047970:intron | 35.0% |
| ATCAACAGAGTCTACATTCA+TGG | + | chr1_1:81197967-81197986 | None:intergenic | 35.0% | |
| AGACTCTGTTGATCAATTTC+AGG | - | chr1_1:81197974-81197993 | Msa0047970:intron | 35.0% | |
| GACTCTGTTGATCAATTTCA+GGG | - | chr1_1:81197975-81197994 | Msa0047970:intron | 35.0% | |
| ACTAACAGAGTCTACATTCA+GGG | - | chr1_1:81198039-81198058 | Msa0047970:intron | 35.0% | |
| GGTAAACATCAATACCATCA+GGG | + | chr1_1:81198272-81198291 | None:intergenic | 35.0% | |
| AGGTAAACATCAATACCATC+AGG | + | chr1_1:81198273-81198292 | None:intergenic | 35.0% | |
| GATGTTTACCTTGACAATGT+TGG | - | chr1_1:81198282-81198301 | Msa0047970:CDS | 35.0% | |
| ! | TTTTACCACCAACATTGTCA+AGG | + | chr1_1:81192952-81192971 | None:intergenic | 35.0% |
| TTCTAGCATTCTTGTTGACA+TGG | + | chr1_1:81198335-81198354 | None:intergenic | 35.0% | |
| AATGCTAGAATACCACTTTG+TGG | - | chr1_1:81198345-81198364 | Msa0047970:intron | 35.0% | |
| ATGCTAGAATACCACTTTGT+GGG | - | chr1_1:81198346-81198365 | Msa0047970:intron | 35.0% | |
| TAGAAATCTTCTGAACATGG+TGG | - | chr1_1:81198544-81198563 | Msa0047970:intron | 35.0% | |
| AGAAATCTTCTGAACATGGT+GGG | - | chr1_1:81198545-81198564 | Msa0047970:intron | 35.0% | |
| CCTCAGATCATCTTAAACTC+CGG | - | chr1_1:81190946-81190965 | Msa0047970:CDS | 40.0% | |
| ATTGGCAAGAGAAAGAGAGA+CGG | + | chr1_1:81190973-81190992 | None:intergenic | 40.0% | |
| TCTGCGAAGATAAGGATCAA+CGG | + | chr1_1:81191042-81191061 | None:intergenic | 40.0% | |
| GTGATTGTTCTGCGAAGATA+AGG | + | chr1_1:81191050-81191069 | None:intergenic | 40.0% | |
| TATCTTCGCAGAACAATCAC+CGG | - | chr1_1:81191050-81191069 | Msa0047970:CDS | 40.0% | |
| TGGCATATAAAGGCCATCAA+TGG | + | chr1_1:81191078-81191097 | None:intergenic | 40.0% | |
| CGTAACCATTCCCATTCAAA+AGG | + | chr1_1:81191384-81191403 | None:intergenic | 40.0% | |
| TGCTAATGGGATTTCACTGT+CGG | - | chr1_1:81191456-81191475 | Msa0047970:intron | 40.0% | |
| TCCTTAAAAAACTACTGCCC+TGG | - | chr1_1:81191697-81191716 | Msa0047970:intron | 40.0% | |
| !!! | ACCAGGGCAGTAGTTTTTTA+AGG | + | chr1_1:81191701-81191720 | None:intergenic | 40.0% |
| !! | AAAAGTGCTTATGCTCAGGA+CGG | + | chr1_1:81191790-81191809 | None:intergenic | 40.0% |
| TTGAACAATTGCAGGAGTAG+CGG | - | chr1_1:81191971-81191990 | Msa0047970:intron | 40.0% | |
| GTAATAGGAGATCCAAAACC+AGG | - | chr1_1:81192020-81192039 | Msa0047970:intron | 40.0% | |
| ! | AACACATGTGATCCTGGTTT+TGG | + | chr1_1:81192035-81192054 | None:intergenic | 40.0% |
| GATATGAACACATGTGATCC+TGG | + | chr1_1:81192041-81192060 | None:intergenic | 40.0% | |
| GAGGAATTAGGATATGACGA+CGG | - | chr1_1:81192267-81192286 | Msa0047970:intron | 40.0% | |
| CGACGGTTTCAATTACAATG+CGG | - | chr1_1:81192284-81192303 | Msa0047970:intron | 40.0% | |
| !!! | GTTGTTTTTGGCCTAAACTC+GGG | - | chr1_1:81192480-81192499 | Msa0047970:intron | 40.0% |
| ! | TAAGTTGCTTTATACAGGGC+AGG | + | chr1_1:81192577-81192596 | None:intergenic | 40.0% |
| ATGCGAATTCATGGAGATCA+TGG | - | chr1_1:81192706-81192725 | Msa0047970:intron | 40.0% | |
| ! | TTCTAGCATGCTTGTTGACA+TGG | + | chr1_1:81192994-81193013 | None:intergenic | 40.0% |
| CATGCTAGAATACCTCTTTG+TGG | - | chr1_1:81193004-81193023 | Msa0047970:intron | 40.0% | |
| TAGGTTTGGACTGAAAGAGA+AGG | - | chr1_1:81193159-81193178 | Msa0047970:intron | 40.0% | |
| ! | TCTTCTGAATATGGTGGGAA+AGG | - | chr1_1:81193191-81193210 | Msa0047970:intron | 40.0% |
| ! | ATATGGTGGGAAAGGAAGTA+AGG | - | chr1_1:81193199-81193218 | Msa0047970:intron | 40.0% |
| CCACCAAGAAATAGACAAGA+GGG | + | chr1_1:81193716-81193735 | None:intergenic | 40.0% | |
| ACCTGAAGTTTAAGAGGTAG+CGG | + | chr1_1:81193879-81193898 | None:intergenic | 40.0% | |
| GAAGAGCTTGCATTTCATGT+TGG | + | chr1_1:81193984-81194003 | None:intergenic | 40.0% | |
| CGACTCTATTCTAGTAGAGA+GGG | + | chr1_1:81194006-81194025 | None:intergenic | 40.0% | |
| ACGACTCTATTCTAGTAGAG+AGG | + | chr1_1:81194007-81194026 | None:intergenic | 40.0% | |
| AAGTTTCCGTGAGAATACCT+TGG | - | chr1_1:81194229-81194248 | Msa0047970:intron | 40.0% | |
| ! | CATCAACCAAGGTATTCTCA+CGG | + | chr1_1:81194238-81194257 | None:intergenic | 40.0% |
| GACCCAAATGATGATTAGTG+TGG | - | chr1_1:81195436-81195455 | Msa0047970:intron | 40.0% | |
| ATTGCACATTGCATCCGAAT+TGG | - | chr1_1:81195570-81195589 | Msa0047970:intron | 40.0% | |
| ATTGCATCCGAATTGGACAT+GGG | - | chr1_1:81195577-81195596 | Msa0047970:intron | 40.0% | |
| CAAATCTCCCATGTCCAATT+CGG | + | chr1_1:81195587-81195606 | None:intergenic | 40.0% | |
| ! | AGTTTAAGATGATCCGAGGT+TGG | + | chr1_1:81195658-81195677 | None:intergenic | 40.0% |
| CAAGAGAAAGAGAAACAGTG+CGG | + | chr1_1:81195681-81195700 | None:intergenic | 40.0% | |
| GTCTTCAGGGATTGAATCAT+CGG | + | chr1_1:81195704-81195723 | None:intergenic | 40.0% | |
| GTGGAATAAAAAGGCCTTCA+AGG | + | chr1_1:81195792-81195811 | None:intergenic | 40.0% | |
| TGTAAGGGTAATTCGATCCA+AGG | - | chr1_1:81196076-81196095 | Msa0047970:intron | 40.0% | |
| GGATAGTAAATACAGTGAGG+GGG | - | chr1_1:81196097-81196116 | Msa0047970:intron | 40.0% | |
| CGAGACCATATCCATTCAAA+AGG | + | chr1_1:81196127-81196146 | None:intergenic | 40.0% | |
| GATAGTGAAATCCCATTAGC+AGG | + | chr1_1:81196200-81196219 | None:intergenic | 40.0% | |
| !! | TGGTTAGGAATAGAGGTACT+AGG | - | chr1_1:81196687-81196706 | Msa0047970:CDS | 40.0% |
| GATATGAACACATTGGATCC+TGG | + | chr1_1:81196723-81196742 | None:intergenic | 40.0% | |
| AGCAGCAGATATGAACACAT+TGG | + | chr1_1:81196730-81196749 | None:intergenic | 40.0% | |
| TTGCTAAGATACGAGGATGT+AGG | - | chr1_1:81196781-81196800 | Msa0047970:intron | 40.0% | |
| TGCTAAGATACGAGGATGTA+GGG | - | chr1_1:81196782-81196801 | Msa0047970:intron | 40.0% | |
| CAACTTGAAACATACCTGGT+TGG | - | chr1_1:81197425-81197444 | Msa0047970:intron | 40.0% | |
| !! | ACATACCTGGTTGGTTTATC+AGG | - | chr1_1:81197434-81197453 | Msa0047970:intron | 40.0% |
| AAAAAAAATTGGTGGGGTGG+GGG | - | chr1_1:81197640-81197659 | Msa0047970:CDS | 40.0% | |
| ! | AGTTCTTTCCGGTGTCAATT+TGG | + | chr1_1:81197680-81197699 | None:intergenic | 40.0% |
| GTTGTTTGTGTGCAATTGCT+AGG | - | chr1_1:81197797-81197816 | Msa0047970:intron | 40.0% | |
| GACTACTCATTTCCCATTCA+AGG | + | chr1_1:81197907-81197926 | None:intergenic | 40.0% | |
| TCAGGGACTAAAGTGACTAA+AGG | - | chr1_1:81197992-81198011 | Msa0047970:intron | 40.0% | |
| CAGGGACTAAAGTGACTAAA+GGG | - | chr1_1:81197993-81198012 | Msa0047970:intron | 40.0% | |
| AGGGACTAAAGTGACTAAAG+GGG | - | chr1_1:81197994-81198013 | Msa0047970:intron | 40.0% | |
| ACTAAAGGGGTCTACATTCA+GGG | - | chr1_1:81198007-81198026 | Msa0047970:intron | 40.0% | |
| GACTAACAGAGTCTACATTC+AGG | - | chr1_1:81198038-81198057 | Msa0047970:intron | 40.0% | |
| TGACGACTCATTTCCTATTC+AGG | - | chr1_1:81198098-81198117 | Msa0047970:intron | 40.0% | |
| GACGACTCATTTCCTATTCA+GGG | - | chr1_1:81198099-81198118 | Msa0047970:intron | 40.0% | |
| ! | AGTCACTTTAGTCCCTGAAT+AGG | + | chr1_1:81198114-81198133 | None:intergenic | 40.0% |
| ! | TTTTGCAGGTATTTCCCTGA+TGG | - | chr1_1:81198255-81198274 | Msa0047970:CDS | 40.0% |
| GTTTACCTTGACAATGTTGG+TGG | - | chr1_1:81198285-81198304 | Msa0047970:CDS | 40.0% | |
| TGAGATATCATCCCACAAAG+TGG | + | chr1_1:81198360-81198379 | None:intergenic | 40.0% | |
| ! | CCGGAGTTTAAGATGATCTG+AGG | + | chr1_1:81190949-81190968 | None:intergenic | 45.0% |
| CAACGGCTAGATGGTTATCT+GGG | + | chr1_1:81191004-81191023 | None:intergenic | 45.0% | |
| TCAACGGCTAGATGGTTATC+TGG | + | chr1_1:81191005-81191024 | None:intergenic | 45.0% | |
| GGAGAGAAGGAGAGTTTCAA+CGG | + | chr1_1:81191021-81191040 | None:intergenic | 45.0% | |
| GATAAGGATCAACGGAGAGA+AGG | + | chr1_1:81191034-81191053 | None:intergenic | 45.0% | |
| ATAAAGGCCATCAATGGTGC+CGG | + | chr1_1:81191072-81191091 | None:intergenic | 45.0% | |
| GACAGTGAAATCCCATTAGC+AGG | + | chr1_1:81191457-81191476 | None:intergenic | 45.0% | |
| GGAACAGGGACATTAAGTCT+AGG | + | chr1_1:81191680-81191699 | None:intergenic | 45.0% | |
| TGAACAATTGCAGGAGTAGC+GGG | - | chr1_1:81191972-81191991 | Msa0047970:intron | 45.0% | |
| TGGCTGGGAATAGAGGTAAT+AGG | - | chr1_1:81192005-81192024 | Msa0047970:intron | 45.0% | |
| GTGTTCATATCTGCTGCATC+TGG | - | chr1_1:81192050-81192069 | Msa0047970:intron | 45.0% | |
| GGTTACACATCACTTCGTGA+TGG | + | chr1_1:81192657-81192676 | None:intergenic | 45.0% | |
| GGAAAGGAAGTAAGGATGGA+GGG | - | chr1_1:81193207-81193226 | Msa0047970:intron | 45.0% | |
| TTAAATGAGCCCCCTACAAG+TGG | + | chr1_1:81193516-81193535 | None:intergenic | 45.0% | |
| AGCTAGAGCAAAGCTCTGTA+TGG | - | chr1_1:81193536-81193555 | Msa0047970:CDS | 45.0% | |
| ATTGAACCTGAGACCTTGAG+AGG | - | chr1_1:81193589-81193608 | Msa0047970:intron | 45.0% | |
| !! | TAGTGGTTGGCTTAGGATCT+TGG | + | chr1_1:81193623-81193642 | None:intergenic | 45.0% |
| AAGATCCTAAGCCAACCACT+AGG | - | chr1_1:81193622-81193641 | Msa0047970:intron | 45.0% | |
| ! | CCCTCTTGTCTATTTCTTGG+TGG | - | chr1_1:81193713-81193732 | Msa0047970:intron | 45.0% |
| GCCACCAAGAAATAGACAAG+AGG | + | chr1_1:81193717-81193736 | None:intergenic | 45.0% | |
| TAACTTGGACGTTCCTGTCA+TGG | + | chr1_1:81193758-81193777 | None:intergenic | 45.0% | |
| CGTGAGAATACCTTGGTTGA+TGG | - | chr1_1:81194236-81194255 | Msa0047970:intron | 45.0% | |
| TGTGATGTCTCCATCAACCA+AGG | + | chr1_1:81194249-81194268 | None:intergenic | 45.0% | |
| ACATACCACTAACCTTGGTC+TGG | + | chr1_1:81195322-81195341 | None:intergenic | 45.0% | |
| ACCTTGGTCTGGTGAAATGA+TGG | + | chr1_1:81195394-81195413 | None:intergenic | 45.0% | |
| TTTCACCAGACCAAGGTTAG+TGG | - | chr1_1:81195397-81195416 | Msa0047970:intron | 45.0% | |
| ACATACCACTAACCTTGGTC+TGG | + | chr1_1:81195322-81195341 | None:intergenic | 45.0% | |
| CATTGCATCCGAATTGGACA+TGG | - | chr1_1:81195576-81195595 | Msa0047970:intron | 45.0% | |
| CGAATTGGACATGGGAGATT+TGG | - | chr1_1:81195585-81195604 | Msa0047970:intron | 45.0% | |
| GGAGAGAAGGAGAGTTTCAA+CGG | + | chr1_1:81191021-81191040 | None:intergenic | 45.0% | |
| GATATGGATCAACGGAGAGA+AGG | + | chr1_1:81195747-81195766 | None:intergenic | 45.0% | |
| TCCGTTGATCCATATCTTCG+CGG | - | chr1_1:81195751-81195770 | Msa0047970:intron | 45.0% | |
| TCCGCGAAGATATGGATCAA+CGG | + | chr1_1:81195755-81195774 | None:intergenic | 45.0% | |
| GTGATTGTTCCGCGAAGATA+TGG | + | chr1_1:81195763-81195782 | None:intergenic | 45.0% | |
| TATCTTCGCGGAACAATCAC+CGG | - | chr1_1:81195763-81195782 | Msa0047970:intron | 45.0% | |
| ! | GAGGGGGATATCCTTTTGAA+TGG | - | chr1_1:81196113-81196132 | Msa0047970:intron | 45.0% |
| ! | ACACATTGGATCCTGGCTTT+GGG | + | chr1_1:81196716-81196735 | None:intergenic | 45.0% |
| AACACATTGGATCCTGGCTT+TGG | + | chr1_1:81196717-81196736 | None:intergenic | 45.0% | |
| ! | GTGTTCATATCTGCTGCTTC+TGG | - | chr1_1:81196732-81196751 | Msa0047970:intron | 45.0% |
| ATACGAGGATGTAGGGTCAT+TGG | - | chr1_1:81196789-81196808 | Msa0047970:intron | 45.0% | |
| CTTCACCTGATAAACCAACC+AGG | + | chr1_1:81197442-81197461 | None:intergenic | 45.0% | |
| GACTAAAGGGGTCTACATTC+AGG | - | chr1_1:81198006-81198025 | Msa0047970:intron | 45.0% | |
| TAGGTTTGGACCGAAAGAGA+AGG | - | chr1_1:81198518-81198537 | Msa0047970:intron | 45.0% | |
| ! | TCTTCTGAACATGGTGGGAA+AGG | - | chr1_1:81198550-81198569 | Msa0047970:intron | 45.0% |
| !!! | TAAATATGAATTTTTTAAAA+CGG | - | chr1_1:81194780-81194799 | Msa0047970:intron | 5.0% |
| !!! | ATAATTTTTATCAATAAAAT+CGG | + | chr1_1:81196252-81196271 | None:intergenic | 5.0% |
| !!! | TTTTATTCAATTATTTTAAA+AGG | - | chr1_1:81196287-81196306 | Msa0047970:CDS | 5.0% |
| !!! | TAAATTATTTGTTTTTATTT+GGG | + | chr1_1:81196559-81196578 | None:intergenic | 5.0% |
| !!! | TTAAATTATTTGTTTTTATT+TGG | + | chr1_1:81196560-81196579 | None:intergenic | 5.0% |
| !! | AATATTAATTAAATAATTTC+AGG | - | chr1_1:81196645-81196664 | Msa0047970:CDS | 5.0% |
| !!! | TATAAAAAAAATGAATTTTT+CGG | - | chr1_1:81197219-81197238 | Msa0047970:intron | 5.0% |
| !!! | TAATATTTTCAAATTATTTA+CGG | - | chr1_1:81197378-81197397 | Msa0047970:CDS | 5.0% |
| ! | TCTGAGGTTGGAACACCTTC+AGG | + | chr1_1:81190933-81190952 | None:intergenic | 50.0% |
| CAAGAGAAAGAGAGACGGTC+CGG | + | chr1_1:81190968-81190987 | None:intergenic | 50.0% | |
| GGAGAGTTTCAACGGCTAGA+TGG | + | chr1_1:81191013-81191032 | None:intergenic | 50.0% | |
| ACAATCACCGGCACCATTGA+TGG | - | chr1_1:81191062-81191081 | Msa0047970:CDS | 50.0% | |
| GAACAATTGCAGGAGTAGCG+GGG | - | chr1_1:81191973-81191992 | Msa0047970:intron | 50.0% | |
| !! | GCCAACTTGCTAAGATCCGA+GGG | - | chr1_1:81192093-81192112 | Msa0047970:intron | 50.0% |
| ACCCTCGGATCTTAGCAAGT+TGG | + | chr1_1:81192097-81192116 | None:intergenic | 50.0% | |
| ! | TTGCTAAGATCCGAGGGTGT+CGG | - | chr1_1:81192099-81192118 | Msa0047970:intron | 50.0% |
| TGTCACGAATGCACAGCGAA+GGG | + | chr1_1:81192762-81192781 | None:intergenic | 50.0% | |
| TTGTCACGAATGCACAGCGA+AGG | + | chr1_1:81192763-81192782 | None:intergenic | 50.0% | |
| GGTGGGAAAGGAAGTAAGGA+TGG | - | chr1_1:81193203-81193222 | Msa0047970:intron | 50.0% | |
| GGGAAAGGAAGTAAGGATGG+AGG | - | chr1_1:81193206-81193225 | Msa0047970:intron | 50.0% | |
| TGCCCACCGAAATTGAGATC+AGG | - | chr1_1:81193562-81193581 | Msa0047970:CDS | 50.0% | |
| GCCCACCGAAATTGAGATCA+GGG | - | chr1_1:81193563-81193582 | Msa0047970:CDS | 50.0% | |
| CCCCTGATCTCAATTTCGGT+GGG | + | chr1_1:81193567-81193586 | None:intergenic | 50.0% | |
| CCCACCGAAATTGAGATCAG+GGG | - | chr1_1:81193564-81193583 | Msa0047970:CDS | 50.0% | |
| TCCCCTGATCTCAATTTCGG+TGG | + | chr1_1:81193568-81193587 | None:intergenic | 50.0% | |
| TTTGCTCCTCTCAAGGTCTC+AGG | + | chr1_1:81193598-81193617 | None:intergenic | 50.0% | |
| ! | CTTGGAGTTTGCTCCTCTCA+AGG | + | chr1_1:81193605-81193624 | None:intergenic | 50.0% |
| !! | GTTGACCTAGTGGTTGGCTT+AGG | + | chr1_1:81193630-81193649 | None:intergenic | 50.0% |
| !! | TAACTCTGGGGTTGACCTAG+TGG | + | chr1_1:81193640-81193659 | None:intergenic | 50.0% |
| GCCGCTACCTCTTAAACTTC+AGG | - | chr1_1:81193875-81193894 | Msa0047970:CDS | 50.0% | |
| ATACAGGAGTCACCAGACCA+AGG | - | chr1_1:81195307-81195326 | Msa0047970:intron | 50.0% | |
| AGTCACCAGACCAAGGTTAG+TGG | - | chr1_1:81195314-81195333 | Msa0047970:intron | 50.0% | |
| GCCATCATTTCACCAGACCA+AGG | - | chr1_1:81195390-81195409 | Msa0047970:intron | 50.0% | |
| TGAGTGTCTGCAATTGGGCA+AGG | + | chr1_1:81195547-81195566 | None:intergenic | 50.0% | |
| GTAGCTGCATACTGTCCTGA+AGG | - | chr1_1:81195628-81195647 | Msa0047970:intron | 50.0% | |
| !! | TCCTGAAGGTGTTCCAACCT+CGG | - | chr1_1:81190929-81190948 | Msa0047970:CDS | 50.0% |
| ! | GCGGAGTTTAAGATGATCCG+AGG | + | chr1_1:81195662-81195681 | None:intergenic | 50.0% |
| CAACGGCTAGATGGTCTTCA+GGG | + | chr1_1:81195717-81195736 | None:intergenic | 50.0% | |
| TCAACGGCTAGATGGTCTTC+AGG | + | chr1_1:81195718-81195737 | None:intergenic | 50.0% | |
| GGAGAGTTTCAACGGCTAGA+TGG | + | chr1_1:81191013-81191032 | None:intergenic | 50.0% | |
| ! | AAAAAGGCCTTCAAGGGTGC+CGG | + | chr1_1:81195785-81195804 | None:intergenic | 50.0% |
| CGCAGCATGGTTAGGAATAG+AGG | - | chr1_1:81196680-81196699 | Msa0047970:CDS | 50.0% | |
| !! | GGTGCTGTTGGTATGAATGC+TGG | - | chr1_1:81196753-81196772 | Msa0047970:intron | 50.0% |
| !! | GGTCAGCTTGCTAAGATACG+AGG | - | chr1_1:81196774-81196793 | Msa0047970:intron | 50.0% |
| ! | TGAAGCACCCACCATTGTTG+TGG | + | chr1_1:81196985-81197004 | None:intergenic | 50.0% |
| ! | TCTGAACATGGTGGGAAAGG+AGG | - | chr1_1:81198553-81198572 | Msa0047970:intron | 50.0% |
| GGTGAGGATGGAAGGCTATA+TGG | - | chr1_1:81198574-81198593 | Msa0047970:intron | 50.0% | |
| TGCAGCATGGCTGGGAATAG+AGG | - | chr1_1:81191998-81192017 | Msa0047970:intron | 55.0% | |
| !! | TCTGCTGCATCTGGTGCTGT+TGG | - | chr1_1:81192059-81192078 | Msa0047970:intron | 55.0% |
| !! | GGTGCTGTTGGTATGAGTGC+TGG | - | chr1_1:81192071-81192090 | Msa0047970:intron | 55.0% |
| !! | GGCCAACTTGCTAAGATCCG+AGG | - | chr1_1:81192092-81192111 | Msa0047970:intron | 55.0% |
| !! | TGCTAAGATCCGAGGGTGTC+GGG | - | chr1_1:81192100-81192119 | Msa0047970:intron | 55.0% |
| AAGCACGGGCTCCGATGATA+AGG | - | chr1_1:81192130-81192149 | Msa0047970:CDS | 55.0% | |
| TATAAAGGCAGGGCCGCACT+TGG | - | chr1_1:81192390-81192409 | Msa0047970:intron | 55.0% | |
| ATAAAGGCAGGGCCGCACTT+GGG | - | chr1_1:81192391-81192410 | Msa0047970:intron | 55.0% | |
| ! | TCTGGGGTTGACCTAGTGGT+TGG | + | chr1_1:81193636-81193655 | None:intergenic | 55.0% |
| TGAGGGGGTGACCATTACCT+AGG | - | chr1_1:81194161-81194180 | Msa0047970:intron | 55.0% | |
| GAGGGGGTGACCATTACCTA+GGG | - | chr1_1:81194162-81194181 | Msa0047970:intron | 55.0% | |
| AGGGGGTGACCATTACCTAG+GGG | - | chr1_1:81194163-81194182 | Msa0047970:intron | 55.0% | |
| TCCGAGGTTGGAACACCTTC+AGG | + | chr1_1:81195646-81195665 | None:intergenic | 55.0% | |
| ACAATCACCGGCACCCTTGA+AGG | - | chr1_1:81195775-81195794 | Msa0047970:intron | 55.0% | |
| GTACTAGGAGACCCAAAGCC+AGG | - | chr1_1:81196702-81196721 | Msa0047970:CDS | 55.0% | |
| !! | TCTGCTGCTTCTGGTGCTGT+TGG | - | chr1_1:81196741-81196760 | Msa0047970:intron | 55.0% |
| TGTAGGGTCATTGGCAGCAC+TGG | - | chr1_1:81196798-81196817 | Msa0047970:intron | 55.0% | |
| !! | CAGCACTGGCTCTGATGAGA+AGG | - | chr1_1:81196812-81196831 | Msa0047970:intron | 55.0% |
| AAAAATTGGTGGGGTGGGGG+TGG | - | chr1_1:81197643-81197662 | Msa0047970:CDS | 55.0% | |
| AAAATTGGTGGGGTGGGGGT+GGG | - | chr1_1:81197644-81197663 | Msa0047970:CDS | 55.0% | |
| ! | ACATGGTGGGAAAGGAGGTG+AGG | - | chr1_1:81198558-81198577 | Msa0047970:intron | 55.0% |
| GGAAAGGAGGTGAGGATGGA+AGG | - | chr1_1:81198566-81198585 | Msa0047970:intron | 55.0% | |
| ! | GAGTAGCGGGGTTTGCAGCA+TGG | - | chr1_1:81191985-81192004 | Msa0047970:intron | 60.0% |
| !! | ATCCGAGGGTGTCGGGTCAT+CGG | - | chr1_1:81192107-81192126 | Msa0047970:intron | 60.0% |
| TTCCGATGACCCGACACCCT+CGG | + | chr1_1:81192112-81192131 | None:intergenic | 60.0% | |
| GTGTCGGGTCATCGGAAGCA+CGG | - | chr1_1:81192115-81192134 | Msa0047970:intron | 60.0% | |
| ! | TGTCGGGTCATCGGAAGCAC+GGG | - | chr1_1:81192116-81192135 | Msa0047970:CDS | 60.0% |
| GATTGAGGTGTGCCGTGTGC+CGG | + | chr1_1:81192417-81192436 | None:intergenic | 60.0% | |
| GAGTACCTGGGTTCGCAGCA+TGG | - | chr1_1:81196667-81196686 | Msa0047970:CDS | 60.0% | |
| CCTAACCATGCTGCGAACCC+AGG | + | chr1_1:81196675-81196694 | None:intergenic | 60.0% | |
| CCTGGGTTCGCAGCATGGTT+AGG | - | chr1_1:81196672-81196691 | Msa0047970:CDS | 60.0% | |
| AAATTGGTGGGGTGGGGGTG+GGG | - | chr1_1:81197645-81197664 | Msa0047970:CDS | 60.0% | |
| GGTGGGAAAGGAGGTGAGGA+TGG | - | chr1_1:81198562-81198581 | Msa0047970:intron | 60.0% | |
| AGCGGGGTTTGCAGCATGGC+TGG | - | chr1_1:81191989-81192008 | Msa0047970:intron | 65.0% | |
| GCGGGGTTTGCAGCATGGCT+GGG | - | chr1_1:81191990-81192009 | Msa0047970:intron | 65.0% | |
| AATTGGTGGGGTGGGGGTGG+GGG | - | chr1_1:81197646-81197665 | Msa0047970:CDS | 65.0% | |
| AGGCAGGGCCGCACTTGGGC+CGG | - | chr1_1:81192395-81192414 | Msa0047970:intron | 75.0% | |
| GCCGCACTTGGGCCGGCACA+CGG | - | chr1_1:81192402-81192421 | Msa0047970:intron | 75.0% | |
| ! | GCCGTGTGCCGGCCCAAGTG+CGG | + | chr1_1:81192406-81192425 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 81190882 | 81198775 | 81190882 | ID=Msa0047970;Name=Msa0047970 |
| chr1_1 | mRNA | 81190882 | 81198775 | 81190882 | ID=Msa0047970-mRNA-1;Parent=Msa0047970;Name=Msa0047970-mRNA-1;_AED=0.33;_eAED=0.33;_QI=0|0.54|0.33|1|0.90|0.83|12|0|691 |
| chr1_1 | exon | 81198638 | 81198775 | 81198638 | ID=Msa0047970-mRNA-1:exon:28052;Parent=Msa0047970-mRNA-1 |
| chr1_1 | exon | 81198170 | 81198347 | 81198170 | ID=Msa0047970-mRNA-1:exon:28051;Parent=Msa0047970-mRNA-1 |
| chr1_1 | exon | 81197506 | 81197672 | 81197506 | ID=Msa0047970-mRNA-1:exon:28050;Parent=Msa0047970-mRNA-1 |
| chr1_1 | exon | 81197323 | 81197405 | 81197323 | ID=Msa0047970-mRNA-1:exon:28049;Parent=Msa0047970-mRNA-1 |
| chr1_1 | exon | 81196609 | 81196735 | 81196609 | ID=Msa0047970-mRNA-1:exon:28048;Parent=Msa0047970-mRNA-1 |
| chr1_1 | exon | 81196242 | 81196495 | 81196242 | ID=Msa0047970-mRNA-1:exon:28047;Parent=Msa0047970-mRNA-1 |
| chr1_1 | exon | 81193829 | 81194138 | 81193829 | ID=Msa0047970-mRNA-1:exon:28046;Parent=Msa0047970-mRNA-1 |
| chr1_1 | exon | 81193418 | 81193601 | 81193418 | ID=Msa0047970-mRNA-1:exon:28045;Parent=Msa0047970-mRNA-1 |
| chr1_1 | exon | 81192824 | 81192990 | 81192824 | ID=Msa0047970-mRNA-1:exon:28044;Parent=Msa0047970-mRNA-1 |
| chr1_1 | exon | 81192116 | 81192201 | 81192116 | ID=Msa0047970-mRNA-1:exon:28043;Parent=Msa0047970-mRNA-1 |
| chr1_1 | exon | 81191268 | 81191394 | 81191268 | ID=Msa0047970-mRNA-1:exon:28042;Parent=Msa0047970-mRNA-1 |
| chr1_1 | exon | 81190882 | 81191136 | 81190882 | ID=Msa0047970-mRNA-1:exon:28041;Parent=Msa0047970-mRNA-1 |
| chr1_1 | CDS | 81198638 | 81198775 | 81198638 | ID=Msa0047970-mRNA-1:cds;Parent=Msa0047970-mRNA-1 |
| chr1_1 | CDS | 81198170 | 81198347 | 81198170 | ID=Msa0047970-mRNA-1:cds;Parent=Msa0047970-mRNA-1 |
| chr1_1 | CDS | 81197506 | 81197672 | 81197506 | ID=Msa0047970-mRNA-1:cds;Parent=Msa0047970-mRNA-1 |
| chr1_1 | CDS | 81197323 | 81197405 | 81197323 | ID=Msa0047970-mRNA-1:cds;Parent=Msa0047970-mRNA-1 |
| chr1_1 | CDS | 81196609 | 81196735 | 81196609 | ID=Msa0047970-mRNA-1:cds;Parent=Msa0047970-mRNA-1 |
| chr1_1 | CDS | 81196242 | 81196495 | 81196242 | ID=Msa0047970-mRNA-1:cds;Parent=Msa0047970-mRNA-1 |
| chr1_1 | CDS | 81193829 | 81194138 | 81193829 | ID=Msa0047970-mRNA-1:cds;Parent=Msa0047970-mRNA-1 |
| chr1_1 | CDS | 81193418 | 81193601 | 81193418 | ID=Msa0047970-mRNA-1:cds;Parent=Msa0047970-mRNA-1 |
| chr1_1 | CDS | 81192824 | 81192990 | 81192824 | ID=Msa0047970-mRNA-1:cds;Parent=Msa0047970-mRNA-1 |
| chr1_1 | CDS | 81192116 | 81192201 | 81192116 | ID=Msa0047970-mRNA-1:cds;Parent=Msa0047970-mRNA-1 |
| chr1_1 | CDS | 81191268 | 81191394 | 81191268 | ID=Msa0047970-mRNA-1:cds;Parent=Msa0047970-mRNA-1 |
| chr1_1 | CDS | 81190882 | 81191136 | 81190882 | ID=Msa0047970-mRNA-1:cds;Parent=Msa0047970-mRNA-1 |
| Gene Sequence |
| Protein sequence |
