Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0262250 | XP_013465138.3 | 95.455 | 396 | 16 | 1 | 1 | 396 | 1 | 394 | 0.0 | 738 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0262250 | sp|Q6DR04|RTNLQ_ARATH | 49.180 | 366 | 166 | 7 | 1 | 351 | 18 | 378 | 1.78e-103 | 315 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0262250 | A0A072VCI4 | 95.455 | 396 | 16 | 1 | 1 | 396 | 1 | 394 | 0.0 | 738 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005890 | Msa0262250 | 0.803725 | 3.039408e-49 | -8.615850e-47 |
| Msa0048510 | Msa0262250 | 0.807908 | 4.016411e-50 | -8.615850e-47 |
| Msa0054690 | Msa0262250 | 0.809106 | 2.228873e-50 | -8.615850e-47 |
| Msa0056180 | Msa0262250 | 0.805173 | 1.517171e-49 | -8.615850e-47 |
| Msa0065020 | Msa0262250 | 0.808142 | 3.580990e-50 | -8.615850e-47 |
| Msa0190570 | Msa0262250 | 0.828330 | 9.546112e-55 | -8.615850e-47 |
| Msa0220810 | Msa0262250 | 0.863081 | 3.209835e-64 | -8.615850e-47 |
| Msa0262250 | Msa0367520 | 0.801538 | 8.586989e-49 | -8.615850e-47 |
| Msa0262250 | Msa0432010 | 0.818240 | 2.173805e-52 | -8.615850e-47 |
| Msa0262250 | Msa0481890 | 0.815068 | 1.117168e-51 | -8.615850e-47 |
| Msa0262250 | Msa0563740 | 0.803562 | 3.285803e-49 | -8.615850e-47 |
| Msa0262250 | Msa0567170 | 0.813963 | 1.961937e-51 | -8.615850e-47 |
| Msa0262250 | Msa0580370 | 0.831661 | 1.471094e-55 | -8.615850e-47 |
| Msa0262250 | Msa0607800 | 0.801597 | 8.351237e-49 | -8.615850e-47 |
| Msa0262250 | Msa0621710 | 0.827824 | 1.263571e-54 | -8.615850e-47 |
| Msa0262250 | Msa0658640 | 0.816802 | 4.582666e-52 | -8.615850e-47 |
| Msa0262250 | Msa0703600 | 0.807793 | 4.249345e-50 | -8.615850e-47 |
| Msa0262250 | Msa0709200 | 0.806335 | 8.648690e-50 | -8.615850e-47 |
| Msa0262250 | Msa0709440 | 0.814681 | 1.361159e-51 | -8.615850e-47 |
| Msa0262250 | Msa0735780 | 0.829201 | 5.878261e-55 | -8.615850e-47 |
| Msa0262250 | Msa0773630 | 0.803870 | 2.836370e-49 | -8.615850e-47 |
| Msa0262250 | Msa0780910 | 0.801809 | 7.555784e-49 | -8.615850e-47 |
| Msa0262250 | Msa0787590 | 0.804709 | 1.896724e-49 | -8.615850e-47 |
| Msa0262250 | Msa0795870 | 0.832127 | 1.128918e-55 | -8.615850e-47 |
| Msa0262250 | Msa0818880 | 0.837230 | 5.874745e-57 | -8.615850e-47 |
| Msa0262250 | Msa0824450 | 0.829675 | 4.508945e-55 | -8.615850e-47 |
| Msa0262250 | Msa0833650 | 0.826854 | 2.158275e-54 | -8.615850e-47 |
| Msa0262250 | Msa0855230 | 0.802687 | 4.985604e-49 | -8.615850e-47 |
| Msa0262250 | Msa0931590 | 0.806167 | 9.382957e-50 | -8.615850e-47 |
| Msa0262250 | Msa0966320 | 0.819362 | 1.208391e-52 | -8.615850e-47 |
| Msa0262250 | Msa0966480 | 0.820904 | 5.359696e-53 | -8.615850e-47 |
| Msa0262250 | Msa1013350 | 0.814296 | 1.656278e-51 | -8.615850e-47 |
| Msa0262250 | Msa1042880 | 0.837115 | 6.288785e-57 | -8.615850e-47 |
| Msa0262250 | Msa1081390 | 0.828739 | 7.603431e-55 | -8.615850e-47 |
| Msa0262250 | Msa1084530 | 0.822428 | 2.380910e-53 | -8.615850e-47 |
| Msa0262250 | Msa1094010 | 0.816732 | 4.751569e-52 | -8.615850e-47 |
| Msa0262250 | Msa1116220 | 0.832647 | 8.388697e-56 | -8.615850e-47 |
| Msa0262250 | Msa1116660 | 0.801379 | 9.255854e-49 | -8.615850e-47 |
| Msa0262250 | Msa1125820 | 0.821236 | 4.494246e-53 | -8.615850e-47 |
| Msa0262250 | Msa1125990 | 0.823031 | 1.723696e-53 | -8.615850e-47 |
| Msa0262250 | Msa1132530 | 0.809586 | 1.758274e-50 | -8.615850e-47 |
| Msa0262250 | Msa1132840 | 0.832556 | 8.837431e-56 | -8.615850e-47 |
| Msa0262250 | Msa1147910 | 0.804851 | 1.771373e-49 | -8.615850e-47 |
| Msa0262250 | Msa1171290 | 0.812220 | 4.731003e-51 | -8.615850e-47 |
| Msa0262250 | Msa1200890 | 0.829024 | 6.488102e-55 | -8.615850e-47 |
| Msa0262250 | Msa1215870 | 0.832047 | 1.181032e-55 | -8.615850e-47 |
| Msa0262250 | Msa1226520 | 0.819505 | 1.121286e-52 | -8.615850e-47 |
| Msa0262250 | Msa1244240 | 0.802219 | 6.222661e-49 | -8.615850e-47 |
| Msa0262250 | Msa1254540 | 0.802736 | 4.870917e-49 | -8.615850e-47 |
| Msa0262250 | Msa1343170 | 0.824900 | 6.281669e-54 | -8.615850e-47 |
| Msa0262250 | Msa1343180 | 0.841359 | 4.984401e-58 | -8.615850e-47 |
| Msa0262250 | Msa1368750 | 0.818852 | 1.578556e-52 | -8.615850e-47 |
| Msa0262250 | Msa1374790 | 0.818248 | 2.164858e-52 | -8.615850e-47 |
| Msa0262250 | Msa1396030 | 0.800864 | 1.180088e-48 | -8.615850e-47 |
| Msa0262250 | Msa1451820 | 0.820667 | 6.077918e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0262250 | MtrunA17_Chr2g0324811 | 95.455 | 396 | 16 | 1 | 1 | 396 | 1 | 394 | 0.0 | 738 |
| Msa0262250 | MtrunA17_Chr4g0040431 | 52.048 | 415 | 155 | 11 | 1 | 386 | 1 | 400 | 1.94e-127 | 373 |
| Msa0262250 | MtrunA17_Chr2g0305891 | 36.017 | 236 | 146 | 3 | 139 | 371 | 326 | 559 | 1.41e-47 | 170 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0262250 | AT2G20590.3 | 49.724 | 362 | 157 | 7 | 1 | 351 | 18 | 365 | 2.78e-105 | 317 |
| Msa0262250 | AT2G20590.1 | 49.180 | 366 | 166 | 7 | 1 | 351 | 18 | 378 | 1.81e-104 | 315 |
| Msa0262250 | AT4G28430.1 | 43.045 | 381 | 186 | 8 | 33 | 386 | 72 | 448 | 9.75e-95 | 291 |
| Msa0262250 | AT2G20590.2 | 49.677 | 310 | 136 | 7 | 1 | 295 | 18 | 322 | 1.86e-83 | 258 |
| Msa0262250 | AT5G58000.1 | 37.168 | 226 | 140 | 1 | 127 | 350 | 216 | 441 | 3.64e-48 | 171 |
| Msa0262250 | AT5G58000.2 | 37.168 | 226 | 140 | 1 | 127 | 350 | 322 | 547 | 9.07e-48 | 171 |
Find 96 sgRNAs with CRISPR-Local
Find 212 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCTCAAGGTTTCAGTTTC+AGG | 0.086023 | 2_2:+61111774 | Msa0262250:CDS |
| ACAATTGGGGATTCTCATTT+TGG | 0.121361 | 2_2:+61112408 | Msa0262250:CDS |
| CTTCTACTAGGAGCTGAATT+TGG | 0.262185 | 2_2:+61112799 | Msa0262250:CDS |
| ATCAAAACTCGAATCTTTAC+AGG | 0.267508 | 2_2:+61113249 | Msa0262250:CDS |
| GTCTCGGCCTTGTCACAATT+GGG | 0.271768 | 2_2:+61112394 | Msa0262250:CDS |
| AACATTGTGGATTACTTTAA+GGG | 0.298725 | 2_2:-61112688 | None:intergenic |
| GTGTAGCAAGAATAAAGTTT+TGG | 0.298854 | 2_2:-61112997 | None:intergenic |
| CTTGAAGGTTGAGGAAAGTT+AGG | 0.307696 | 2_2:-61111525 | None:intergenic |
| TGTCTCGGCCTTGTCACAAT+TGG | 0.309341 | 2_2:+61112393 | Msa0262250:CDS |
| GTTGGGTTGGTTGAAGAAAT+TGG | 0.313151 | 2_2:+61111456 | Msa0262250:CDS |
| TAGAATTTGAAGAAGAAAAT+GGG | 0.333581 | 2_2:+61111639 | Msa0262250:intron |
| ACAAAATCAACCCTTTGGTT+TGG | 0.349573 | 2_2:+61111719 | Msa0262250:CDS |
| GTAGAATTTGAAGAAGAAAA+TGG | 0.354309 | 2_2:+61111638 | Msa0262250:intron |
| GGGGTTGATTTAGATCATAT+TGG | 0.354774 | 2_2:+61111659 | Msa0262250:CDS |
| GAATTTGATGGGAATATAAA+AGG | 0.363370 | 2_2:-61113965 | None:intergenic |
| ACTTCGTATCGCGGTTTCCT+TGG | 0.378063 | 2_2:-61111402 | None:intergenic |
| ACGGTCGATGAGACGGGTCT+TGG | 0.378085 | 2_2:-61111292 | None:intergenic |
| GAAAACAAAGATGGTGTTGT+TGG | 0.391114 | 2_2:+61111438 | Msa0262250:CDS |
| GGGTTGATTTAGATCATATT+GGG | 0.393926 | 2_2:+61111660 | Msa0262250:CDS |
| TCAACCCTTTGGTTTGGACT+TGG | 0.396972 | 2_2:+61111725 | Msa0262250:CDS |
| TTCACTTCTTTCACAACTCA+TGG | 0.403824 | 2_2:+61111155 | Msa0262250:exon |
| GAAATGAATGAAAGGTTTAG+AGG | 0.405695 | 2_2:-61111118 | None:intergenic |
| TGGGCAGTTAGTGAGTGATT+TGG | 0.427688 | 2_2:+61111679 | Msa0262250:CDS |
| ATATAAAAGGCGGGTTCTCT+TGG | 0.429788 | 2_2:-61113952 | None:intergenic |
| GAGAATTAAAATGGTGCATC+GGG | 0.433683 | 2_2:+61114593 | Msa0262250:three_prime_UTR |
| ATTACTTTAAGGGTCATTGA+TGG | 0.440294 | 2_2:-61112678 | None:intergenic |
| TTGGCCACTTAATTACAATC+AGG | 0.443528 | 2_2:+61112818 | Msa0262250:CDS |
| GATTGGTTTAACAGTGATGA+TGG | 0.443820 | 2_2:-61111211 | None:intergenic |
| CACTCACAAGAAGAAATTAA+CGG | 0.445955 | 2_2:+61113191 | Msa0262250:CDS |
| ATGTAACAAAATCAACCCTT+TGG | 0.446627 | 2_2:+61111714 | Msa0262250:CDS |
| GGAAACTCAACTGGCATTAG+TGG | 0.450988 | 2_2:+61113862 | Msa0262250:CDS |
| GGTGATGGAGATTGTTGGAT+TGG | 0.451311 | 2_2:-61111228 | None:intergenic |
| ATGATGGGAAGTGATTGATT+TGG | 0.454441 | 2_2:-61111195 | None:intergenic |
| GGGTTTGAAACTATTGTTGT+TGG | 0.463082 | 2_2:+61113152 | Msa0262250:CDS |
| CGGCTAAACAATGTTAGAAA+AGG | 0.471096 | 2_2:+61114504 | Msa0262250:three_prime_UTR |
| TCAGCTCCTAGTAGAAGAAA+AGG | 0.471363 | 2_2:-61112793 | None:intergenic |
| CAAAGATGGTGTTGTTGGGT+TGG | 0.477270 | 2_2:+61111443 | Msa0262250:CDS |
| TTCAAGACGGTCGATGAGAC+GGG | 0.478046 | 2_2:-61111298 | None:intergenic |
| AACTATTGTTGTTGGATACA+TGG | 0.478642 | 2_2:+61113160 | Msa0262250:CDS |
| AGGACCAGGGTGCTATTCTC+AGG | 0.481892 | 2_2:+61112651 | Msa0262250:CDS |
| CGTACACAAGAGGAATTTGA+TGG | 0.482311 | 2_2:-61113977 | None:intergenic |
| AGAAGAACAGGAAACTCAAC+TGG | 0.484855 | 2_2:+61113853 | Msa0262250:CDS |
| GCCTCCTGATTGTAATTAAG+TGG | 0.488567 | 2_2:-61112822 | None:intergenic |
| GTGTACGGAGAAAATATTGT+TGG | 0.491333 | 2_2:+61113993 | Msa0262250:three_prime_UTR |
| ATTAACATACTTGAAGGTTG+AGG | 0.503849 | 2_2:-61111534 | None:intergenic |
| TAGTGAGTGATTTGGTTATG+TGG | 0.506027 | 2_2:+61111687 | Msa0262250:CDS |
| TTGATATTTCAGCATTGTCT+CGG | 0.506205 | 2_2:+61112378 | Msa0262250:intron |
| GAAACTGCAAAATTTAGAGC+AGG | 0.506256 | 2_2:-61112627 | None:intergenic |
| AGCCGTAACTAAAAGACGTC+AGG | 0.511207 | 2_2:-61114486 | None:intergenic |
| AAAACAAAGATGGTGTTGTT+GGG | 0.515013 | 2_2:+61111439 | Msa0262250:CDS |
| GTGATGGTGATGGAGATTGT+TGG | 0.526109 | 2_2:-61111233 | None:intergenic |
| GAAGGAGATGGTGATGGTGA+TGG | 0.527359 | 2_2:-61111243 | None:intergenic |
| ATGGGAAGTGATTGATTTGG+AGG | 0.529556 | 2_2:-61111192 | None:intergenic |
| CATCAAATTCCTCTTGTGTA+CGG | 0.530434 | 2_2:+61113978 | Msa0262250:three_prime_UTR |
| ATCAGGAGGCTATGTGTCAC+TGG | 0.536218 | 2_2:+61112835 | Msa0262250:CDS |
| GGAGAATTAAAATGGTGCAT+CGG | 0.536824 | 2_2:+61114592 | Msa0262250:three_prime_UTR |
| TCTCAAATTCAATTTCTCAA+AGG | 0.543153 | 2_2:+61112443 | Msa0262250:CDS |
| ATTCAACAAGAAAACAAAGA+TGG | 0.548877 | 2_2:+61111429 | Msa0262250:CDS |
| TCTCGGCCTTGTCACAATTG+GGG | 0.549735 | 2_2:+61112395 | Msa0262250:CDS |
| ATGTGAGAATTCATCTCGCA+TGG | 0.551185 | 2_2:+61114452 | Msa0262250:intron |
| TTTCAAGACGGTCGATGAGA+CGG | 0.551751 | 2_2:-61111299 | None:intergenic |
| ACATCCAAGTCCAAACCAAA+GGG | 0.560703 | 2_2:-61111729 | None:intergenic |
| TTGATGGGAATATAAAAGGC+GGG | 0.565252 | 2_2:-61113961 | None:intergenic |
| TACATCCAAGTCCAAACCAA+AGG | 0.566308 | 2_2:-61111730 | None:intergenic |
| ATTCCAGAATGTCAAAAGTA+CGG | 0.567233 | 2_2:-61113217 | None:intergenic |
| AACAGCCGCTGATGAATCCC+CGG | 0.570060 | 2_2:+61111320 | Msa0262250:CDS |
| ATAAGGAGAATTGATGTGGT+TGG | 0.570150 | 2_2:+61113906 | Msa0262250:exon |
| GCCACTTAATTACAATCAGG+AGG | 0.572666 | 2_2:+61112821 | Msa0262250:CDS |
| ATATAACACTCGACCCAAGA+AGG | 0.581043 | 2_2:+61111497 | Msa0262250:CDS |
| GAGTTTGTGAAATGAATGAA+AGG | 0.583275 | 2_2:-61111126 | None:intergenic |
| GATGAATCCCCGGAACCCGC+CGG | 0.584062 | 2_2:+61111330 | Msa0262250:CDS |
| GTGGTTGGTAGTTCGATCAT+AGG | 0.584557 | 2_2:+61113921 | Msa0262250:three_prime_UTR |
| GGAAGTGATTGATTTGGAGG+TGG | 0.585573 | 2_2:-61111189 | None:intergenic |
| TGAGTTGTGAAAGAAGTGAA+AGG | 0.602549 | 2_2:-61111152 | None:intergenic |
| CAAGATGGAAAAGCACAAGT+AGG | 0.610927 | 2_2:+61113788 | Msa0262250:CDS |
| AAAAGCACAAGTAGGTGAGA+AGG | 0.616726 | 2_2:+61113796 | Msa0262250:CDS |
| GTTGGTAGTTCGATCATAGG+TGG | 0.616826 | 2_2:+61113924 | Msa0262250:three_prime_UTR |
| AGAATTTGAAGAAGAAAATG+GGG | 0.616889 | 2_2:+61111640 | Msa0262250:intron |
| TTTGATGGGAATATAAAAGG+CGG | 0.617758 | 2_2:-61113962 | None:intergenic |
| AGTGGCGAAGGTGAAGGTGA+AGG | 0.627200 | 2_2:-61111261 | None:intergenic |
| TTTCTGAGTGGCGAAGGTGA+AGG | 0.631670 | 2_2:-61111267 | None:intergenic |
| GAAGGTGAAGGTGAAGGAGA+TGG | 0.634185 | 2_2:-61111255 | None:intergenic |
| TGAATTTCAACTTCGTATCG+CGG | 0.636174 | 2_2:-61111411 | None:intergenic |
| CATCAGCGGCTGTTTCAAGA+CGG | 0.637889 | 2_2:-61111311 | None:intergenic |
| ATTGGTTTAACAGTGATGAT+GGG | 0.640797 | 2_2:-61111210 | None:intergenic |
| GAAGGTGAAGGAGATGGTGA+TGG | 0.641396 | 2_2:-61111249 | None:intergenic |
| GGGTTCCGGGGATTCATCAG+CGG | 0.642117 | 2_2:-61111325 | None:intergenic |
| CAGATACTTAAAGCAGCATG+TGG | 0.658923 | 2_2:+61113754 | Msa0262250:CDS |
| GTACACAAGAGGAATTTGAT+GGG | 0.662137 | 2_2:-61113976 | None:intergenic |
| TTCTCCTGAGAATAGCACCC+TGG | 0.662515 | 2_2:-61112655 | None:intergenic |
| GAGAATCCCCAATTGTGACA+AGG | 0.663769 | 2_2:-61112401 | None:intergenic |
| GTGGTGCTGCAATTACAAGA+TGG | 0.665984 | 2_2:+61113773 | Msa0262250:CDS |
| AAAACAACACTCGAAAACCA+AGG | 0.680630 | 2_2:+61111385 | Msa0262250:CDS |
| CTATTTGTATTTCAGCAAAG+GGG | 0.684853 | 2_2:+61112539 | Msa0262250:intron |
| CCCGCCGGTGTAAAACGACG+TGG | 0.687854 | 2_2:+61111345 | Msa0262250:CDS |
| ACTAGTCAGATAGACAAGCG+AGG | 0.729323 | 2_2:+61113018 | Msa0262250:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATCACAAAAAAAAAAATTA+GGG | - | chr2_2:61111612-61111631 | None:intergenic | 10.0% |
| !! | AAATCACAAAAAAAAAAATT+AGG | - | chr2_2:61111613-61111632 | None:intergenic | 10.0% |
| !! | ATCTAGTCTATATAAAAAAA+TGG | + | chr2_2:61113514-61113533 | Msa0262250:intron | 15.0% |
| !! | AGTAATTAATATGCTAAAAA+AGG | - | chr2_2:61114567-61114586 | None:intergenic | 15.0% |
| !!! | TAGCATATTAATTACTTTTA+AGG | + | chr2_2:61114571-61114590 | Msa0262250:intron | 15.0% |
| !! | TAGAATTTGAAGAAGAAAAT+GGG | + | chr2_2:61111639-61111658 | Msa0262250:intron | 20.0% |
| !! | GTTTACTAAGCAAAATTAAA+GGG | - | chr2_2:61111821-61111840 | None:intergenic | 20.0% |
| !!! | ATTAATAATTTTCTTGTTGC+AGG | + | chr2_2:61112765-61112784 | Msa0262250:intron | 20.0% |
| !! | TATACATACTATAAACATAC+AGG | + | chr2_2:61112952-61112971 | Msa0262250:intron | 20.0% |
| !!! | CTTAGTAATTATTGATTAAG+TGG | + | chr2_2:61113349-61113368 | Msa0262250:intron | 20.0% |
| !!! | TCTTATGATATCATTTTTGT+TGG | + | chr2_2:61113706-61113725 | Msa0262250:intron | 20.0% |
| !! | TAACTCAGATTCAAAAAATA+AGG | + | chr2_2:61113889-61113908 | Msa0262250:CDS | 20.0% |
| !!! | ACTTTTAAGGAGAATTAAAA+TGG | + | chr2_2:61114584-61114603 | Msa0262250:three_prime_UTR | 20.0% |
| !! | CCAATAAGTAACTAAAAAAA+GGG | - | chr2_2:61114622-61114641 | None:intergenic | 20.0% |
| !! | ACCAATAAGTAACTAAAAAA+AGG | - | chr2_2:61114623-61114642 | None:intergenic | 20.0% |
| ! | ATTCAACAAGAAAACAAAGA+TGG | + | chr2_2:61111429-61111448 | Msa0262250:CDS | 25.0% |
| !! | GTGTTATATTTTCTCTTTCT+AGG | - | chr2_2:61111486-61111505 | None:intergenic | 25.0% |
| ! | GTAGAATTTGAAGAAGAAAA+TGG | + | chr2_2:61111638-61111657 | Msa0262250:intron | 25.0% |
| ! | AGAATTTGAAGAAGAAAATG+GGG | + | chr2_2:61111640-61111659 | Msa0262250:intron | 25.0% |
| ! | GGTTTACTAAGCAAAATTAA+AGG | - | chr2_2:61111822-61111841 | None:intergenic | 25.0% |
| ! | TTGCTTAGTAAACCTTTAAT+TGG | + | chr2_2:61111828-61111847 | Msa0262250:intron | 25.0% |
| ! | TAGTTAAGCAATCCAATTAA+AGG | - | chr2_2:61111843-61111862 | None:intergenic | 25.0% |
| ! | AATCTCAGAATGATAGTTTA+GGG | + | chr2_2:61111998-61112017 | Msa0262250:intron | 25.0% |
| !! | GGACAGTGTTATTATATATA+TGG | + | chr2_2:61112108-61112127 | Msa0262250:intron | 25.0% |
| ! | CTTGAATGAACTATTGTTTA+CGG | - | chr2_2:61112143-61112162 | None:intergenic | 25.0% |
| ! | ATTTGTGATCTTTATTCTCA+TGG | + | chr2_2:61112332-61112351 | Msa0262250:intron | 25.0% |
| ! | TCTCAAATTCAATTTCTCAA+AGG | + | chr2_2:61112443-61112462 | Msa0262250:CDS | 25.0% |
| ! | TTCTATTTGTATTTCAGCAA+AGG | + | chr2_2:61112537-61112556 | Msa0262250:intron | 25.0% |
| ! | TCTATTTGTATTTCAGCAAA+GGG | + | chr2_2:61112538-61112557 | Msa0262250:intron | 25.0% |
| !! | AACATTGTGGATTACTTTAA+GGG | - | chr2_2:61112691-61112710 | None:intergenic | 25.0% |
| ! | AATTCAGAATAAGAACATTG+TGG | - | chr2_2:61112704-61112723 | None:intergenic | 25.0% |
| ! | TATATAGATGATAGAGTTCA+TGG | - | chr2_2:61112872-61112891 | None:intergenic | 25.0% |
| !! | TGTAGCAAGAATAAAGTTTT+GGG | - | chr2_2:61112999-61113018 | None:intergenic | 25.0% |
| ! | AATTGAACATAAATTTGTGC+AGG | - | chr2_2:61113416-61113435 | None:intergenic | 25.0% |
| !!! | TTGGATTTTAAGATTCATAG+TGG | - | chr2_2:61113620-61113639 | None:intergenic | 25.0% |
| ! | ACTATGAATCTTAAAATCCA+AGG | + | chr2_2:61113619-61113638 | Msa0262250:intron | 25.0% |
| ! | TCCAAGGAGTTATTTATTTA+TGG | + | chr2_2:61113635-61113654 | Msa0262250:intron | 25.0% |
| ! | TCCATAAATAAATAACTCCT+TGG | - | chr2_2:61113639-61113658 | None:intergenic | 25.0% |
| ! | ATAAGAATCAACTTTGACAA+AGG | - | chr2_2:61113692-61113711 | None:intergenic | 25.0% |
| ! | AAAAATAAGGAGAATTGATG+TGG | + | chr2_2:61113902-61113921 | Msa0262250:exon | 25.0% |
| ! | GAATTTGATGGGAATATAAA+AGG | - | chr2_2:61113968-61113987 | None:intergenic | 25.0% |
| !! | TACATGTACTATTTTATCGT+TGG | + | chr2_2:61114169-61114188 | Msa0262250:intron | 25.0% |
| !!! | AGTCATAGGAATAACTTTTT+TGG | - | chr2_2:61114415-61114434 | None:intergenic | 25.0% |
| !!! | CCCTTTTTTTAGTTACTTAT+TGG | + | chr2_2:61114619-61114638 | Msa0262250:three_prime_UTR | 25.0% |
| GAGTTTGTGAAATGAATGAA+AGG | - | chr2_2:61111129-61111148 | None:intergenic | 30.0% | |
| ! | ATTGGTTTAACAGTGATGAT+GGG | - | chr2_2:61111213-61111232 | None:intergenic | 30.0% |
| !! | AAAACAAAGATGGTGTTGTT+GGG | + | chr2_2:61111439-61111458 | Msa0262250:CDS | 30.0% |
| ! | AAGTTAGGTTTTTCCTTCTT+GGG | - | chr2_2:61111513-61111532 | None:intergenic | 30.0% |
| ! | AAAGTTAGGTTTTTCCTTCT+TGG | - | chr2_2:61111514-61111533 | None:intergenic | 30.0% |
| ATTAACATACTTGAAGGTTG+AGG | - | chr2_2:61111537-61111556 | None:intergenic | 30.0% | |
| CATTGCATTAACATACTTGA+AGG | - | chr2_2:61111543-61111562 | None:intergenic | 30.0% | |
| ! | GGGTTGATTTAGATCATATT+GGG | + | chr2_2:61111660-61111679 | Msa0262250:CDS | 30.0% |
| ATGTAACAAAATCAACCCTT+TGG | + | chr2_2:61111714-61111733 | Msa0262250:CDS | 30.0% | |
| ! | TTATCTTCATGCTTTTCTCA+AGG | + | chr2_2:61111761-61111780 | Msa0262250:CDS | 30.0% |
| ! | GCTATTAGTTTCAATTGTTC+AGG | + | chr2_2:61111961-61111980 | Msa0262250:intron | 30.0% |
| GAATCTCAGAATGATAGTTT+AGG | + | chr2_2:61111997-61112016 | Msa0262250:intron | 30.0% | |
| TCAGGGTTATCATTGTAATA+TGG | + | chr2_2:61112087-61112106 | Msa0262250:intron | 30.0% | |
| TTGATATTTCAGCATTGTCT+CGG | + | chr2_2:61112378-61112397 | Msa0262250:intron | 30.0% | |
| CTATTTGTATTTCAGCAAAG+GGG | + | chr2_2:61112539-61112558 | Msa0262250:intron | 30.0% | |
| ! | CTCTAAATTTTGCAGTTTCA+AGG | + | chr2_2:61112631-61112650 | Msa0262250:CDS | 30.0% |
| ! | ATTACTTTAAGGGTCATTGA+TGG | - | chr2_2:61112681-61112700 | None:intergenic | 30.0% |
| ! | GAACATTGTGGATTACTTTA+AGG | - | chr2_2:61112692-61112711 | None:intergenic | 30.0% |
| ! | GTAATTCCTTTTCTTCTACT+AGG | + | chr2_2:61112787-61112806 | Msa0262250:CDS | 30.0% |
| ! | ACATTGGGTTTTCAAAGAAA+AGG | - | chr2_2:61112896-61112915 | None:intergenic | 30.0% |
| AGCGAACTATAATTGACATT+GGG | - | chr2_2:61112911-61112930 | None:intergenic | 30.0% | |
| AAGCGAACTATAATTGACAT+TGG | - | chr2_2:61112912-61112931 | None:intergenic | 30.0% | |
| ! | GTGTAGCAAGAATAAAGTTT+TGG | - | chr2_2:61113000-61113019 | None:intergenic | 30.0% |
| !!! | TAACTTGTTGAAGCTTTTGT+AGG | + | chr2_2:61113064-61113083 | Msa0262250:intron | 30.0% |
| ! | AACTATTGTTGTTGGATACA+TGG | + | chr2_2:61113160-61113179 | Msa0262250:CDS | 30.0% |
| CACTCACAAGAAGAAATTAA+CGG | + | chr2_2:61113191-61113210 | Msa0262250:CDS | 30.0% | |
| ATTCCAGAATGTCAAAAGTA+CGG | - | chr2_2:61113220-61113239 | None:intergenic | 30.0% | |
| ATCAAAACTCGAATCTTTAC+AGG | + | chr2_2:61113249-61113268 | Msa0262250:CDS | 30.0% | |
| ! | TTACTAAGACATTTTGCAGA+AGG | - | chr2_2:61113337-61113356 | None:intergenic | 30.0% |
| ATTAAGTGGAAAGATAACTG+TGG | + | chr2_2:61113363-61113382 | Msa0262250:intron | 30.0% | |
| ! | TCAATTTTTCTATGTGTGCT+AGG | + | chr2_2:61113430-61113449 | Msa0262250:intron | 30.0% |
| TTTGATGGGAATATAAAAGG+CGG | - | chr2_2:61113965-61113984 | None:intergenic | 30.0% | |
| AATATTGTTGGTATGTGAGA+AGG | + | chr2_2:61114005-61114024 | Msa0262250:intron | 30.0% | |
| ATATTGTTGGTATGTGAGAA+GGG | + | chr2_2:61114006-61114025 | Msa0262250:intron | 30.0% | |
| TAGTAATGTTTGCAACATCT+TGG | + | chr2_2:61114143-61114162 | Msa0262250:intron | 30.0% | |
| TCTTAAGTGTTACACTTTGT+GGG | + | chr2_2:61114234-61114253 | Msa0262250:intron | 30.0% | |
| TGTTATGCTTATAACAAGGT+AGG | + | chr2_2:61114258-61114277 | Msa0262250:intron | 30.0% | |
| AAATTCTATGGTGAAGTCAT+AGG | - | chr2_2:61114429-61114448 | None:intergenic | 30.0% | |
| TTCTCACATGGAAAATTCTA+TGG | - | chr2_2:61114441-61114460 | None:intergenic | 30.0% | |
| TGAGTTGTGAAAGAAGTGAA+AGG | - | chr2_2:61111155-61111174 | None:intergenic | 35.0% | |
| TTCACTTCTTTCACAACTCA+TGG | + | chr2_2:61111155-61111174 | Msa0262250:exon | 35.0% | |
| ! | ATGATGGGAAGTGATTGATT+TGG | - | chr2_2:61111198-61111217 | None:intergenic | 35.0% |
| !! | GATTGGTTTAACAGTGATGA+TGG | - | chr2_2:61111214-61111233 | None:intergenic | 35.0% |
| AAAACAACACTCGAAAACCA+AGG | + | chr2_2:61111385-61111404 | Msa0262250:CDS | 35.0% | |
| TGAATTTCAACTTCGTATCG+CGG | - | chr2_2:61111414-61111433 | None:intergenic | 35.0% | |
| !! | GAAAACAAAGATGGTGTTGT+TGG | + | chr2_2:61111438-61111457 | Msa0262250:CDS | 35.0% |
| ! | GGGGTTGATTTAGATCATAT+TGG | + | chr2_2:61111659-61111678 | Msa0262250:CDS | 35.0% |
| !! | TAGTGAGTGATTTGGTTATG+TGG | + | chr2_2:61111687-61111706 | Msa0262250:CDS | 35.0% |
| ACAAAATCAACCCTTTGGTT+TGG | + | chr2_2:61111719-61111738 | Msa0262250:CDS | 35.0% | |
| TTTCTCAAGGTTTCAGTTTC+AGG | + | chr2_2:61111774-61111793 | Msa0262250:CDS | 35.0% | |
| TCTATTTAGCCCCTCAAAAT+CGG | + | chr2_2:61111874-61111893 | Msa0262250:intron | 35.0% | |
| ATCGGAGAGAGTGATAATTT+AGG | + | chr2_2:61111892-61111911 | Msa0262250:intron | 35.0% | |
| TCAATTGTTCAGGATCAGAT+TGG | + | chr2_2:61111971-61111990 | Msa0262250:intron | 35.0% | |
| GATTGTTTGTTTACGCAGTT+TGG | - | chr2_2:61112218-61112237 | None:intergenic | 35.0% | |
| TTCTCATGGAGAAAAAACTG+AGG | + | chr2_2:61112346-61112365 | Msa0262250:intron | 35.0% | |
| ! | ACAATTGGGGATTCTCATTT+TGG | + | chr2_2:61112408-61112427 | Msa0262250:CDS | 35.0% |
| ! | CAATTGGGGATTCTCATTTT+GGG | + | chr2_2:61112409-61112428 | Msa0262250:CDS | 35.0% |
| ! | GAAACTGCAAAATTTAGAGC+AGG | - | chr2_2:61112630-61112649 | None:intergenic | 35.0% |
| TTGGCCACTTAATTACAATC+AGG | + | chr2_2:61112818-61112837 | Msa0262250:CDS | 35.0% | |
| TTATATGCATATGCAGCTGA+GGG | + | chr2_2:61113132-61113151 | Msa0262250:intron | 35.0% | |
| ! | GGGTTTGAAACTATTGTTGT+TGG | + | chr2_2:61113152-61113171 | Msa0262250:CDS | 35.0% |
| TAAACTCCAATACATTGCAG+TGG | - | chr2_2:61113544-61113563 | None:intergenic | 35.0% | |
| ACAACAGAAAAAAGAACCAG+TGG | + | chr2_2:61113820-61113839 | Msa0262250:CDS | 35.0% | |
| ATAAGGAGAATTGATGTGGT+TGG | + | chr2_2:61113906-61113925 | Msa0262250:exon | 35.0% | |
| TTGATGGGAATATAAAAGGC+GGG | - | chr2_2:61113964-61113983 | None:intergenic | 35.0% | |
| GTACACAAGAGGAATTTGAT+GGG | - | chr2_2:61113979-61113998 | None:intergenic | 35.0% | |
| CATCAAATTCCTCTTGTGTA+CGG | + | chr2_2:61113978-61113997 | Msa0262250:three_prime_UTR | 35.0% | |
| ! | ATATTTTCTCCGTACACAAG+AGG | - | chr2_2:61113990-61114009 | None:intergenic | 35.0% |
| GTGTACGGAGAAAATATTGT+TGG | + | chr2_2:61113993-61114012 | Msa0262250:three_prime_UTR | 35.0% | |
| GTCTTAAGTGTTACACTTTG+TGG | + | chr2_2:61114233-61114252 | Msa0262250:intron | 35.0% | |
| CTTAAGTGTTACACTTTGTG+GGG | + | chr2_2:61114235-61114254 | Msa0262250:intron | 35.0% | |
| TGATGCCATTGTACAAATAG+TGG | + | chr2_2:61114347-61114366 | Msa0262250:intron | 35.0% | |
| GATGCCATTGTACAAATAGT+GGG | + | chr2_2:61114348-61114367 | Msa0262250:intron | 35.0% | |
| ATGCCATTGTACAAATAGTG+GGG | + | chr2_2:61114349-61114368 | Msa0262250:intron | 35.0% | |
| !! | TTCCTGACGTCTTTTAGTTA+CGG | + | chr2_2:61114484-61114503 | Msa0262250:three_prime_UTR | 35.0% |
| CGGCTAAACAATGTTAGAAA+AGG | + | chr2_2:61114504-61114523 | Msa0262250:three_prime_UTR | 35.0% | |
| GGAGAATTAAAATGGTGCAT+CGG | + | chr2_2:61114592-61114611 | Msa0262250:three_prime_UTR | 35.0% | |
| GAGAATTAAAATGGTGCATC+GGG | + | chr2_2:61114593-61114612 | Msa0262250:three_prime_UTR | 35.0% | |
| !! | ATGGGAAGTGATTGATTTGG+AGG | - | chr2_2:61111195-61111214 | None:intergenic | 40.0% |
| !!! | AGTGTTGTTTTGAGTGAGTC+TGG | - | chr2_2:61111376-61111395 | None:intergenic | 40.0% |
| !! | GTTGGGTTGGTTGAAGAAAT+TGG | + | chr2_2:61111456-61111475 | Msa0262250:CDS | 40.0% |
| ATATAACACTCGACCCAAGA+AGG | + | chr2_2:61111497-61111516 | Msa0262250:CDS | 40.0% | |
| CTTGAAGGTTGAGGAAAGTT+AGG | - | chr2_2:61111528-61111547 | None:intergenic | 40.0% | |
| ACATCCAAGTCCAAACCAAA+GGG | - | chr2_2:61111732-61111751 | None:intergenic | 40.0% | |
| TACATCCAAGTCCAAACCAA+AGG | - | chr2_2:61111733-61111752 | None:intergenic | 40.0% | |
| ! | ATCACTCTCTCCGATTTTGA+GGG | - | chr2_2:61111887-61111906 | None:intergenic | 40.0% |
| ! | TATCACTCTCTCCGATTTTG+AGG | - | chr2_2:61111888-61111907 | None:intergenic | 40.0% |
| TGACCCATAAGCACAAAAGA+TGG | + | chr2_2:61112044-61112063 | Msa0262250:intron | 40.0% | |
| GACCCATAAGCACAAAAGAT+GGG | + | chr2_2:61112045-61112064 | Msa0262250:intron | 40.0% | |
| ! | TGCCCATCTTTTGTGCTTAT+GGG | - | chr2_2:61112050-61112069 | None:intergenic | 40.0% |
| ! | TTGCCCATCTTTTGTGCTTA+TGG | - | chr2_2:61112051-61112070 | None:intergenic | 40.0% |
| TAAGCACAAAAGATGGGCAA+AGG | + | chr2_2:61112051-61112070 | Msa0262250:intron | 40.0% | |
| AAGCACAAAAGATGGGCAAA+GGG | + | chr2_2:61112052-61112071 | Msa0262250:intron | 40.0% | |
| ! | ATTTTGCAGTTTCAAGGACC+AGG | + | chr2_2:61112637-61112656 | Msa0262250:CDS | 40.0% |
| ! | TTTTGCAGTTTCAAGGACCA+GGG | + | chr2_2:61112638-61112657 | Msa0262250:CDS | 40.0% |
| TCAGCTCCTAGTAGAAGAAA+AGG | - | chr2_2:61112796-61112815 | None:intergenic | 40.0% | |
| CTTCTACTAGGAGCTGAATT+TGG | + | chr2_2:61112799-61112818 | Msa0262250:CDS | 40.0% | |
| GCCACTTAATTACAATCAGG+AGG | + | chr2_2:61112821-61112840 | Msa0262250:CDS | 40.0% | |
| GCCTCCTGATTGTAATTAAG+TGG | - | chr2_2:61112825-61112844 | None:intergenic | 40.0% | |
| GTTATATGCATATGCAGCTG+AGG | + | chr2_2:61113131-61113150 | Msa0262250:intron | 40.0% | |
| ! | TGTCCGTACTTTTGACATTC+TGG | + | chr2_2:61113214-61113233 | Msa0262250:CDS | 40.0% |
| !! | TGTGCAGGAGTGATTTGTTA+AGG | - | chr2_2:61113401-61113420 | None:intergenic | 40.0% |
| GAGTTTATTCAGCAATACGC+TGG | + | chr2_2:61113557-61113576 | Msa0262250:intron | 40.0% | |
| CAGATACTTAAAGCAGCATG+TGG | + | chr2_2:61113754-61113773 | Msa0262250:CDS | 40.0% | |
| ! | CAAGATGGAAAAGCACAAGT+AGG | + | chr2_2:61113788-61113807 | Msa0262250:CDS | 40.0% |
| ! | AAAAGCACAAGTAGGTGAGA+AGG | + | chr2_2:61113796-61113815 | Msa0262250:CDS | 40.0% |
| ACAGAAAAAAGAACCAGTGG+TGG | + | chr2_2:61113823-61113842 | Msa0262250:CDS | 40.0% | |
| !!! | TCTTCTGTTTTTACCACCAC+TGG | - | chr2_2:61113839-61113858 | None:intergenic | 40.0% |
| GGTGGTAAAAACAGAAGAAC+AGG | + | chr2_2:61113841-61113860 | Msa0262250:CDS | 40.0% | |
| AGAAGAACAGGAAACTCAAC+TGG | + | chr2_2:61113853-61113872 | Msa0262250:CDS | 40.0% | |
| ! | ATATAAAAGGCGGGTTCTCT+TGG | - | chr2_2:61113955-61113974 | None:intergenic | 40.0% |
| CGTACACAAGAGGAATTTGA+TGG | - | chr2_2:61113980-61113999 | None:intergenic | 40.0% | |
| ! | GGGGTGTTATGCTTATAACA+AGG | + | chr2_2:61114254-61114273 | Msa0262250:intron | 40.0% |
| ACACCCCACTATTTGTACAA+TGG | - | chr2_2:61114355-61114374 | None:intergenic | 40.0% | |
| ATGCGAGATGAATTCTCACA+TGG | - | chr2_2:61114453-61114472 | None:intergenic | 40.0% | |
| ATGTGAGAATTCATCTCGCA+TGG | + | chr2_2:61114452-61114471 | Msa0262250:intron | 40.0% | |
| !! | GGAAGTGATTGATTTGGAGG+TGG | - | chr2_2:61111192-61111211 | None:intergenic | 45.0% |
| !! | GGTGATGGAGATTGTTGGAT+TGG | - | chr2_2:61111231-61111250 | None:intergenic | 45.0% |
| !! | GTGATGGTGATGGAGATTGT+TGG | - | chr2_2:61111236-61111255 | None:intergenic | 45.0% |
| ! | TTGGATTTTCTGAGTGGCGA+AGG | - | chr2_2:61111276-61111295 | None:intergenic | 45.0% |
| TTTCAAGACGGTCGATGAGA+CGG | - | chr2_2:61111302-61111321 | None:intergenic | 45.0% | |
| !! | TTTGCCACGTCGTTTTACAC+CGG | - | chr2_2:61111352-61111371 | None:intergenic | 45.0% |
| !! | CAAAGATGGTGTTGTTGGGT+TGG | + | chr2_2:61111443-61111462 | Msa0262250:CDS | 45.0% |
| TGGGCAGTTAGTGAGTGATT+TGG | + | chr2_2:61111679-61111698 | Msa0262250:CDS | 45.0% | |
| !! | TCAACCCTTTGGTTTGGACT+TGG | + | chr2_2:61111725-61111744 | Msa0262250:CDS | 45.0% |
| ! | TCACTCTCTCCGATTTTGAG+GGG | - | chr2_2:61111886-61111905 | None:intergenic | 45.0% |
| AAAAGATGGGCAAAGGGCTT+TGG | + | chr2_2:61112058-61112077 | Msa0262250:intron | 45.0% | |
| ! | AAAGGGCTTTGGTACAGTTC+AGG | + | chr2_2:61112069-61112088 | Msa0262250:intron | 45.0% |
| ! | AAGGGCTTTGGTACAGTTCA+GGG | + | chr2_2:61112070-61112089 | Msa0262250:intron | 45.0% |
| TGCTCTGTAATCGTAGACGT+AGG | + | chr2_2:61112183-61112202 | Msa0262250:intron | 45.0% | |
| GAGAATCCCCAATTGTGACA+AGG | - | chr2_2:61112404-61112423 | None:intergenic | 45.0% | |
| ! | GCTATGTGTCACTGGTTAGT+AGG | + | chr2_2:61112843-61112862 | Msa0262250:intron | 45.0% |
| ACTAGTCAGATAGACAAGCG+AGG | + | chr2_2:61113018-61113037 | Msa0262250:CDS | 45.0% | |
| CTCCAATACATTGCAGTGGA+AGG | - | chr2_2:61113540-61113559 | None:intergenic | 45.0% | |
| ! | GTTGGCAGCTTTTATGTTGC+TGG | + | chr2_2:61113724-61113743 | Msa0262250:intron | 45.0% |
| !! | GTGGTGCTGCAATTACAAGA+TGG | + | chr2_2:61113773-61113792 | Msa0262250:CDS | 45.0% |
| GGAAACTCAACTGGCATTAG+TGG | + | chr2_2:61113862-61113881 | Msa0262250:CDS | 45.0% | |
| !! | GTGGTTGGTAGTTCGATCAT+AGG | + | chr2_2:61113921-61113940 | Msa0262250:three_prime_UTR | 45.0% |
| !! | GTTGGTAGTTCGATCATAGG+TGG | + | chr2_2:61113924-61113943 | Msa0262250:three_prime_UTR | 45.0% |
| ATGTGAGAAGGGAGCTTCTA+CGG | + | chr2_2:61114017-61114036 | Msa0262250:intron | 45.0% | |
| AGCCGTAACTAAAAGACGTC+AGG | - | chr2_2:61114489-61114508 | None:intergenic | 45.0% | |
| !! | GAAGGAGATGGTGATGGTGA+TGG | - | chr2_2:61111246-61111265 | None:intergenic | 50.0% |
| GAAGGTGAAGGAGATGGTGA+TGG | - | chr2_2:61111252-61111271 | None:intergenic | 50.0% | |
| GAAGGTGAAGGTGAAGGAGA+TGG | - | chr2_2:61111258-61111277 | None:intergenic | 50.0% | |
| TTTCTGAGTGGCGAAGGTGA+AGG | - | chr2_2:61111270-61111289 | None:intergenic | 50.0% | |
| ! | CGGGTCTTGGATTTTCTGAG+TGG | - | chr2_2:61111282-61111301 | None:intergenic | 50.0% |
| TTCAAGACGGTCGATGAGAC+GGG | - | chr2_2:61111301-61111320 | None:intergenic | 50.0% | |
| ! | CATCAGCGGCTGTTTCAAGA+CGG | - | chr2_2:61111314-61111333 | None:intergenic | 50.0% |
| ACTTCGTATCGCGGTTTCCT+TGG | - | chr2_2:61111405-61111424 | None:intergenic | 50.0% | |
| ATCGTAGACGTAGGCACACT+TGG | + | chr2_2:61112192-61112211 | Msa0262250:intron | 50.0% | |
| ! | TGTCTCGGCCTTGTCACAAT+TGG | + | chr2_2:61112393-61112412 | Msa0262250:CDS | 50.0% |
| ! | GTCTCGGCCTTGTCACAATT+GGG | + | chr2_2:61112394-61112413 | Msa0262250:CDS | 50.0% |
| ! | TCTCGGCCTTGTCACAATTG+GGG | + | chr2_2:61112395-61112414 | Msa0262250:CDS | 50.0% |
| TTCTCCTGAGAATAGCACCC+TGG | - | chr2_2:61112658-61112677 | None:intergenic | 50.0% | |
| ATCAGGAGGCTATGTGTCAC+TGG | + | chr2_2:61112835-61112854 | Msa0262250:CDS | 50.0% | |
| GGCCTTCCACTGCAATGTAT+TGG | + | chr2_2:61113535-61113554 | Msa0262250:intron | 50.0% | |
| AGTGGCGAAGGTGAAGGTGA+AGG | - | chr2_2:61111264-61111283 | None:intergenic | 55.0% | |
| AACAGCCGCTGATGAATCCC+CGG | + | chr2_2:61111320-61111339 | Msa0262250:CDS | 55.0% | |
| !! | AGGACCAGGGTGCTATTCTC+AGG | + | chr2_2:61112651-61112670 | Msa0262250:CDS | 55.0% |
| ACGGTCGATGAGACGGGTCT+TGG | - | chr2_2:61111295-61111314 | None:intergenic | 60.0% | |
| GGGTTCCGGGGATTCATCAG+CGG | - | chr2_2:61111328-61111347 | None:intergenic | 60.0% | |
| !! | TTTTACACCGGCGGGTTCCG+GGG | - | chr2_2:61111340-61111359 | None:intergenic | 60.0% |
| !! | GTTTTACACCGGCGGGTTCC+GGG | - | chr2_2:61111341-61111360 | None:intergenic | 60.0% |
| !! | CGTTTTACACCGGCGGGTTC+CGG | - | chr2_2:61111342-61111361 | None:intergenic | 60.0% |
| !! | CCACGTCGTTTTACACCGGC+GGG | - | chr2_2:61111348-61111367 | None:intergenic | 60.0% |
| !! | GCCACGTCGTTTTACACCGG+CGG | - | chr2_2:61111349-61111368 | None:intergenic | 60.0% |
| GATGAATCCCCGGAACCCGC+CGG | + | chr2_2:61111330-61111349 | Msa0262250:CDS | 65.0% | |
| CCCGCCGGTGTAAAACGACG+TGG | + | chr2_2:61111345-61111364 | Msa0262250:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 61111121 | 61114657 | 61111121 | ID=Msa0262250;Name=Msa0262250 |
| chr2_2 | mRNA | 61111121 | 61114657 | 61111121 | ID=Msa0262250-mRNA-1;Parent=Msa0262250;Name=Msa0262250-mRNA-1;_AED=0.21;_eAED=0.21;_QI=53|1|1|1|0.77|0.7|10|267|396 |
| chr2_2 | exon | 61111121 | 61111546 | 61111121 | ID=Msa0262250-mRNA-1:exon:18831;Parent=Msa0262250-mRNA-1 |
| chr2_2 | exon | 61111642 | 61111795 | 61111642 | ID=Msa0262250-mRNA-1:exon:18832;Parent=Msa0262250-mRNA-1 |
| chr2_2 | exon | 61112390 | 61112464 | 61112390 | ID=Msa0262250-mRNA-1:exon:18833;Parent=Msa0262250-mRNA-1 |
| chr2_2 | exon | 61112554 | 61112695 | 61112554 | ID=Msa0262250-mRNA-1:exon:18834;Parent=Msa0262250-mRNA-1 |
| chr2_2 | exon | 61112787 | 61112856 | 61112787 | ID=Msa0262250-mRNA-1:exon:18835;Parent=Msa0262250-mRNA-1 |
| chr2_2 | exon | 61112974 | 61113039 | 61112974 | ID=Msa0262250-mRNA-1:exon:18836;Parent=Msa0262250-mRNA-1 |
| chr2_2 | exon | 61113148 | 61113270 | 61113148 | ID=Msa0262250-mRNA-1:exon:18837;Parent=Msa0262250-mRNA-1 |
| chr2_2 | exon | 61113732 | 61114014 | 61113732 | ID=Msa0262250-mRNA-1:exon:18838;Parent=Msa0262250-mRNA-1 |
| chr2_2 | exon | 61114458 | 61114543 | 61114458 | ID=Msa0262250-mRNA-1:exon:18839;Parent=Msa0262250-mRNA-1 |
| chr2_2 | exon | 61114572 | 61114657 | 61114572 | ID=Msa0262250-mRNA-1:exon:18840;Parent=Msa0262250-mRNA-1 |
| chr2_2 | five_prime_UTR | 61111121 | 61111173 | 61111121 | ID=Msa0262250-mRNA-1:five_prime_utr;Parent=Msa0262250-mRNA-1 |
| chr2_2 | CDS | 61111174 | 61111546 | 61111174 | ID=Msa0262250-mRNA-1:cds;Parent=Msa0262250-mRNA-1 |
| chr2_2 | CDS | 61111642 | 61111795 | 61111642 | ID=Msa0262250-mRNA-1:cds;Parent=Msa0262250-mRNA-1 |
| chr2_2 | CDS | 61112390 | 61112464 | 61112390 | ID=Msa0262250-mRNA-1:cds;Parent=Msa0262250-mRNA-1 |
| chr2_2 | CDS | 61112554 | 61112695 | 61112554 | ID=Msa0262250-mRNA-1:cds;Parent=Msa0262250-mRNA-1 |
| chr2_2 | CDS | 61112787 | 61112856 | 61112787 | ID=Msa0262250-mRNA-1:cds;Parent=Msa0262250-mRNA-1 |
| chr2_2 | CDS | 61112974 | 61113039 | 61112974 | ID=Msa0262250-mRNA-1:cds;Parent=Msa0262250-mRNA-1 |
| chr2_2 | CDS | 61113148 | 61113270 | 61113148 | ID=Msa0262250-mRNA-1:cds;Parent=Msa0262250-mRNA-1 |
| chr2_2 | CDS | 61113732 | 61113919 | 61113732 | ID=Msa0262250-mRNA-1:cds;Parent=Msa0262250-mRNA-1 |
| chr2_2 | three_prime_UTR | 61113920 | 61114014 | 61113920 | ID=Msa0262250-mRNA-1:three_prime_utr;Parent=Msa0262250-mRNA-1 |
| chr2_2 | three_prime_UTR | 61114458 | 61114543 | 61114458 | ID=Msa0262250-mRNA-1:three_prime_utr;Parent=Msa0262250-mRNA-1 |
| chr2_2 | three_prime_UTR | 61114572 | 61114657 | 61114572 | ID=Msa0262250-mRNA-1:three_prime_utr;Parent=Msa0262250-mRNA-1 |
| Gene Sequence |
| Protein sequence |
