Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0855230 | XP_003616102.1 | 95.599 | 659 | 16 | 5 | 1 | 654 | 1 | 651 | 0.0 | 1257 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0855230 | sp|Q5XVH5|Y1710_ARATH | 37.055 | 618 | 208 | 25 | 1 | 600 | 1 | 455 | 1.42e-58 | 207 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0855230 | G7K5X9 | 95.599 | 659 | 16 | 5 | 1 | 654 | 1 | 651 | 0.0 | 1257 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005020 | Msa0855230 | 0.802842 | 4.630445e-49 | -8.615850e-47 |
| Msa0005890 | Msa0855230 | 0.818267 | 2.142951e-52 | -8.615850e-47 |
| Msa0016040 | Msa0855230 | 0.843537 | 1.318469e-58 | -8.615850e-47 |
| Msa0020540 | Msa0855230 | 0.816690 | 4.856871e-52 | -8.615850e-47 |
| Msa0025160 | Msa0855230 | 0.818862 | 1.570523e-52 | -8.615850e-47 |
| Msa0025580 | Msa0855230 | 0.818125 | 2.306939e-52 | -8.615850e-47 |
| Msa0027280 | Msa0855230 | 0.805341 | 1.398916e-49 | -8.615850e-47 |
| Msa0032460 | Msa0855230 | 0.810236 | 1.274054e-50 | -8.615850e-47 |
| Msa0032980 | Msa0855230 | 0.832718 | 8.057452e-56 | -8.615850e-47 |
| Msa0035140 | Msa0855230 | 0.803343 | 3.647754e-49 | -8.615850e-47 |
| Msa0035340 | Msa0855230 | 0.802296 | 6.000522e-49 | -8.615850e-47 |
| Msa0037740 | Msa0855230 | 0.814759 | 1.307858e-51 | -8.615850e-47 |
| Msa0038940 | Msa0855230 | 0.807071 | 6.046799e-50 | -8.615850e-47 |
| Msa0042640 | Msa0855230 | 0.818533 | 1.865467e-52 | -8.615850e-47 |
| Msa0048510 | Msa0855230 | 0.849226 | 3.704871e-60 | -8.615850e-47 |
| Msa0049760 | Msa0855230 | 0.800999 | 1.107111e-48 | -8.615850e-47 |
| Msa0052480 | Msa0855230 | 0.808836 | 2.546940e-50 | -8.615850e-47 |
| Msa0053070 | Msa0855230 | 0.820867 | 5.467092e-53 | -8.615850e-47 |
| Msa0054690 | Msa0855230 | 0.851472 | 8.681449e-61 | -8.615850e-47 |
| Msa0056180 | Msa0855230 | 0.844368 | 7.896955e-59 | -8.615850e-47 |
| Msa0062340 | Msa0855230 | 0.858974 | 5.697966e-63 | -8.615850e-47 |
| Msa0065020 | Msa0855230 | 0.829044 | 6.413412e-55 | -8.615850e-47 |
| Msa0068150 | Msa0855230 | 0.841357 | 4.991938e-58 | -8.615850e-47 |
| Msa0072520 | Msa0855230 | 0.813963 | 1.961784e-51 | -8.615850e-47 |
| Msa0073120 | Msa0855230 | 0.813587 | 2.373062e-51 | -8.615850e-47 |
| Msa0074360 | Msa0855230 | 0.810753 | 9.856131e-51 | -8.615850e-47 |
| Msa0075530 | Msa0855230 | 0.831176 | 1.936774e-55 | -8.615850e-47 |
| Msa0077340 | Msa0855230 | 0.812451 | 4.212678e-51 | -8.615850e-47 |
| Msa0077560 | Msa0855230 | 0.856975 | 2.235748e-62 | -8.615850e-47 |
| Msa0081980 | Msa0855230 | 0.800296 | 1.540082e-48 | -8.615850e-47 |
| Msa0089460 | Msa0855230 | 0.816974 | 4.193711e-52 | -8.615850e-47 |
| Msa0091350 | Msa0855230 | 0.815182 | 1.053810e-51 | -8.615850e-47 |
| Msa0094780 | Msa0855230 | 0.828073 | 1.100830e-54 | -8.615850e-47 |
| Msa0094790 | Msa0855230 | 0.804988 | 1.658015e-49 | -8.615850e-47 |
| Msa0097890 | Msa0855230 | 0.805269 | 1.448053e-49 | -8.615850e-47 |
| Msa0098520 | Msa0855230 | 0.801096 | 1.057841e-48 | -8.615850e-47 |
| Msa0110200 | Msa0855230 | 0.818994 | 1.465534e-52 | -8.615850e-47 |
| Msa0115550 | Msa0855230 | 0.828591 | 8.257389e-55 | -8.615850e-47 |
| Msa0606100 | Msa0855230 | 0.846500 | 2.088964e-59 | -8.615850e-47 |
| Msa0607800 | Msa0855230 | 0.856641 | 2.803861e-62 | -8.615850e-47 |
| Msa0613580 | Msa0855230 | 0.801971 | 7.000773e-49 | -8.615850e-47 |
| Msa0613630 | Msa0855230 | 0.809906 | 1.500692e-50 | -8.615850e-47 |
| Msa0615630 | Msa0855230 | 0.829993 | 3.772629e-55 | -8.615850e-47 |
| Msa0620500 | Msa0855230 | 0.826741 | 2.297024e-54 | -8.615850e-47 |
| Msa0621710 | Msa0855230 | 0.862383 | 5.269003e-64 | -8.615850e-47 |
| Msa0624900 | Msa0855230 | 0.814437 | 1.541374e-51 | -8.615850e-47 |
| Msa0641990 | Msa0855230 | 0.806490 | 8.019103e-50 | -8.615850e-47 |
| Msa0647050 | Msa0855230 | 0.848706 | 5.167589e-60 | -8.615850e-47 |
| Msa0648040 | Msa0855230 | 0.839381 | 1.639413e-57 | -8.615850e-47 |
| Msa0657700 | Msa0855230 | 0.800035 | 1.740736e-48 | -8.615850e-47 |
| Msa0658640 | Msa0855230 | 0.883604 | 3.897643e-71 | -8.615850e-47 |
| Msa0661150 | Msa0855230 | 0.841883 | 3.627393e-58 | -8.615850e-47 |
| Msa0666700 | Msa0855230 | 0.865361 | 6.245391e-65 | -8.615850e-47 |
| Msa0668900 | Msa0855230 | 0.817054 | 4.023773e-52 | -8.615850e-47 |
| Msa0687090 | Msa0855230 | 0.800471 | 1.418826e-48 | -8.615850e-47 |
| Msa0690740 | Msa0855230 | 0.836649 | 8.268839e-57 | -8.615850e-47 |
| Msa0698730 | Msa0855230 | 0.831178 | 1.934054e-55 | -8.615850e-47 |
| Msa0702810 | Msa0855230 | 0.813969 | 1.955060e-51 | -8.615850e-47 |
| Msa0703600 | Msa0855230 | 0.882862 | 7.297167e-71 | -8.615850e-47 |
| Msa0709200 | Msa0855230 | 0.881723 | 1.893337e-70 | -8.615850e-47 |
| Msa0709440 | Msa0855230 | 0.885466 | 7.939181e-72 | -8.615850e-47 |
| Msa0709630 | Msa0855230 | 0.832754 | 7.894073e-56 | -8.615850e-47 |
| Msa0714520 | Msa0855230 | 0.852587 | 4.184853e-61 | -8.615850e-47 |
| Msa0714790 | Msa0855230 | 0.842815 | 2.053814e-58 | -8.615850e-47 |
| Msa0716480 | Msa0855230 | 0.838669 | 2.506062e-57 | -8.615850e-47 |
| Msa0716890 | Msa0855230 | 0.800227 | 1.590918e-48 | -8.615850e-47 |
| Msa0717830 | Msa0855230 | 0.808687 | 2.740282e-50 | -8.615850e-47 |
| Msa0717900 | Msa0855230 | 0.806539 | 7.830181e-50 | -8.615850e-47 |
| Msa0721080 | Msa0855230 | 0.801983 | 6.958579e-49 | -8.615850e-47 |
| Msa0722220 | Msa0855230 | 0.810356 | 1.200608e-50 | -8.615850e-47 |
| Msa0730930 | Msa0855230 | 0.818741 | 1.673556e-52 | -8.615850e-47 |
| Msa0735780 | Msa0855230 | 0.878561 | 2.542761e-69 | -8.615850e-47 |
| Msa0738700 | Msa0855230 | 0.818309 | 2.096375e-52 | -8.615850e-47 |
| Msa0740710 | Msa0855230 | 0.853281 | 2.650750e-61 | -8.615850e-47 |
| Msa0743440 | Msa0855230 | 0.848766 | 4.972752e-60 | -8.615850e-47 |
| Msa0745720 | Msa0855230 | 0.845580 | 3.716077e-59 | -8.615850e-47 |
| Msa0747740 | Msa0855230 | 0.817690 | 2.893012e-52 | -8.615850e-47 |
| Msa0754430 | Msa0855230 | 0.825689 | 4.087808e-54 | -8.615850e-47 |
| Msa0754450 | Msa0855230 | 0.821650 | 3.606976e-53 | -8.615850e-47 |
| Msa0756820 | Msa0855230 | 0.837044 | 6.556947e-57 | -8.615850e-47 |
| Msa0758590 | Msa0855230 | 0.809961 | 1.460490e-50 | -8.615850e-47 |
| Msa0758650 | Msa0855230 | 0.821976 | 3.031125e-53 | -8.615850e-47 |
| Msa0761670 | Msa0855230 | 0.823628 | 1.250199e-53 | -8.615850e-47 |
| Msa0773630 | Msa0855230 | 0.882973 | 6.644881e-71 | -8.615850e-47 |
| Msa0777750 | Msa0855230 | 0.892450 | 1.570088e-74 | -8.615850e-47 |
| Msa0778550 | Msa0855230 | 0.810199 | 1.297725e-50 | -8.615850e-47 |
| Msa0780910 | Msa0855230 | 0.888288 | 6.746069e-73 | -8.615850e-47 |
| Msa0787590 | Msa0855230 | 0.836519 | 8.921993e-57 | -8.615850e-47 |
| Msa0795870 | Msa0855230 | 0.847151 | 1.386645e-59 | -8.615850e-47 |
| Msa0800660 | Msa0855230 | 0.802369 | 5.796102e-49 | -8.615850e-47 |
| Msa0804000 | Msa0855230 | 0.811161 | 8.039403e-51 | -8.615850e-47 |
| Msa0805680 | Msa0855230 | 0.831683 | 1.452665e-55 | -8.615850e-47 |
| Msa0811020 | Msa0855230 | 0.839966 | 1.155160e-57 | -8.615850e-47 |
| Msa0815920 | Msa0855230 | 0.810444 | 1.149125e-50 | -8.615850e-47 |
| Msa0815970 | Msa0855230 | 0.820914 | 5.332622e-53 | -8.615850e-47 |
| Msa0816080 | Msa0855230 | 0.800106 | 1.683443e-48 | -8.615850e-47 |
| Msa0818130 | Msa0855230 | 0.806664 | 7.370983e-50 | -8.615850e-47 |
| Msa0818150 | Msa0855230 | 0.818144 | 2.284846e-52 | -8.615850e-47 |
| Msa0818880 | Msa0855230 | 0.831058 | 2.070316e-55 | -8.615850e-47 |
| Msa0821160 | Msa0855230 | 0.881959 | 1.555684e-70 | -8.615850e-47 |
| Msa0824450 | Msa0855230 | 0.862716 | 4.160284e-64 | -8.615850e-47 |
| Msa0828970 | Msa0855230 | 0.819997 | 8.654707e-53 | -8.615850e-47 |
| Msa0833650 | Msa0855230 | 0.848033 | 7.932564e-60 | -8.615850e-47 |
| Msa0836150 | Msa0855230 | 0.825662 | 4.148837e-54 | -8.615850e-47 |
| Msa0837460 | Msa0855230 | 0.841780 | 3.861989e-58 | -8.615850e-47 |
| Msa0842070 | Msa0855230 | 0.842847 | 2.013421e-58 | -8.615850e-47 |
| Msa0121330 | Msa0855230 | 0.845687 | 3.475783e-59 | -8.615850e-47 |
| Msa0122330 | Msa0855230 | 0.829066 | 6.336382e-55 | -8.615850e-47 |
| Msa0123070 | Msa0855230 | 0.826284 | 2.951104e-54 | -8.615850e-47 |
| Msa0125360 | Msa0855230 | 0.802401 | 5.710201e-49 | -8.615850e-47 |
| Msa0127680 | Msa0855230 | 0.805338 | 1.400936e-49 | -8.615850e-47 |
| Msa0140280 | Msa0855230 | 0.832326 | 1.007595e-55 | -8.615850e-47 |
| Msa0140380 | Msa0855230 | 0.835290 | 1.829036e-56 | -8.615850e-47 |
| Msa0140730 | Msa0855230 | 0.809649 | 1.704903e-50 | -8.615850e-47 |
| Msa0159590 | Msa0855230 | 0.840877 | 6.671757e-58 | -8.615850e-47 |
| Msa0159620 | Msa0855230 | 0.830782 | 2.419352e-55 | -8.615850e-47 |
| Msa0165830 | Msa0855230 | 0.822957 | 1.793488e-53 | -8.615850e-47 |
| Msa0168050 | Msa0855230 | 0.816857 | 4.455132e-52 | -8.615850e-47 |
| Msa0173290 | Msa0855230 | 0.805760 | 1.142450e-49 | -8.615850e-47 |
| Msa0173810 | Msa0855230 | 0.816926 | 4.299365e-52 | -8.615850e-47 |
| Msa0181650 | Msa0855230 | 0.821042 | 4.981944e-53 | -8.615850e-47 |
| Msa0190570 | Msa0855230 | 0.850860 | 1.291870e-60 | -8.615850e-47 |
| Msa0190730 | Msa0855230 | 0.839779 | 1.291914e-57 | -8.615850e-47 |
| Msa0200050 | Msa0855230 | 0.853415 | 2.425516e-61 | -8.615850e-47 |
| Msa0213030 | Msa0855230 | 0.810613 | 1.056591e-50 | -8.615850e-47 |
| Msa0225860 | Msa0855230 | 0.817813 | 2.714245e-52 | -8.615850e-47 |
| Msa0232760 | Msa0855230 | 0.829734 | 4.360966e-55 | -8.615850e-47 |
| Msa0233020 | Msa0855230 | 0.828087 | 1.092570e-54 | -8.615850e-47 |
| Msa0367150 | Msa0855230 | 0.800408 | 1.461593e-48 | -8.615850e-47 |
| Msa0367520 | Msa0855230 | 0.841438 | 4.750483e-58 | -8.615850e-47 |
| Msa0368860 | Msa0855230 | 0.834581 | 2.759028e-56 | -8.615850e-47 |
| Msa0369790 | Msa0855230 | 0.813640 | 2.310547e-51 | -8.615850e-47 |
| Msa0371270 | Msa0855230 | 0.825077 | 5.705716e-54 | -8.615850e-47 |
| Msa0373500 | Msa0855230 | 0.835024 | 2.133954e-56 | -8.615850e-47 |
| Msa0373590 | Msa0855230 | 0.818069 | 2.375679e-52 | -8.615850e-47 |
| Msa0377710 | Msa0855230 | 0.830854 | 2.322525e-55 | -8.615850e-47 |
| Msa0380490 | Msa0855230 | 0.820891 | 5.396600e-53 | -8.615850e-47 |
| Msa0380670 | Msa0855230 | 0.836688 | 8.080397e-57 | -8.615850e-47 |
| Msa0383000 | Msa0855230 | 0.836767 | 7.716671e-57 | -8.615850e-47 |
| Msa0385890 | Msa0855230 | 0.802949 | 4.401551e-49 | -8.615850e-47 |
| Msa0405620 | Msa0855230 | 0.800036 | 1.739682e-48 | -8.615850e-47 |
| Msa0409830 | Msa0855230 | 0.803712 | 3.057739e-49 | -8.615850e-47 |
| Msa0419540 | Msa0855230 | 0.825661 | 4.150061e-54 | -8.615850e-47 |
| Msa0421130 | Msa0855230 | 0.800656 | 1.300872e-48 | -8.615850e-47 |
| Msa0422050 | Msa0855230 | 0.815696 | 8.097910e-52 | -8.615850e-47 |
| Msa0430000 | Msa0855230 | 0.825348 | 4.921815e-54 | -8.615850e-47 |
| Msa0430300 | Msa0855230 | 0.830740 | 2.477756e-55 | -8.615850e-47 |
| Msa0430480 | Msa0855230 | 0.812148 | 4.903637e-51 | -8.615850e-47 |
| Msa0432010 | Msa0855230 | 0.850815 | 1.330327e-60 | -8.615850e-47 |
| Msa0433150 | Msa0855230 | 0.842917 | 1.929041e-58 | -8.615850e-47 |
| Msa0433760 | Msa0855230 | 0.826547 | 2.555115e-54 | -8.615850e-47 |
| Msa0436330 | Msa0855230 | 0.849906 | 2.393594e-60 | -8.615850e-47 |
| Msa0447750 | Msa0855230 | 0.811450 | 6.959740e-51 | -8.615850e-47 |
| Msa0462780 | Msa0855230 | 0.823329 | 1.468909e-53 | -8.615850e-47 |
| Msa0464000 | Msa0855230 | 0.812147 | 4.907849e-51 | -8.615850e-47 |
| Msa0466880 | Msa0855230 | 0.802225 | 6.207445e-49 | -8.615850e-47 |
| Msa0468620 | Msa0855230 | 0.804094 | 2.546919e-49 | -8.615850e-47 |
| Msa0468700 | Msa0855230 | 0.841923 | 3.538464e-58 | -8.615850e-47 |
| Msa0477630 | Msa0855230 | 0.824538 | 7.645930e-54 | -8.615850e-47 |
| Msa0480730 | Msa0855230 | 0.811726 | 6.060573e-51 | -8.615850e-47 |
| Msa0481890 | Msa0855230 | 0.881891 | 1.645962e-70 | -8.615850e-47 |
| Msa0242590 | Msa0855230 | 0.823833 | 1.119692e-53 | -8.615850e-47 |
| Msa0260510 | Msa0855230 | 0.816556 | 5.203076e-52 | -8.615850e-47 |
| Msa0262250 | Msa0855230 | 0.802687 | 4.985604e-49 | -8.615850e-47 |
| Msa0269210 | Msa0855230 | 0.856992 | 2.209828e-62 | -8.615850e-47 |
| Msa0271880 | Msa0855230 | 0.805713 | 1.168716e-49 | -8.615850e-47 |
| Msa0272260 | Msa0855230 | 0.842766 | 2.116103e-58 | -8.615850e-47 |
| Msa0274320 | Msa0855230 | 0.809969 | 1.455020e-50 | -8.615850e-47 |
| Msa0280790 | Msa0855230 | 0.827027 | 1.962079e-54 | -8.615850e-47 |
| Msa0293040 | Msa0855230 | 0.806293 | 8.826118e-50 | -8.615850e-47 |
| Msa0298470 | Msa0855230 | 0.845182 | 4.764243e-59 | -8.615850e-47 |
| Msa0330380 | Msa0855230 | 0.805159 | 1.527285e-49 | -8.615850e-47 |
| Msa0340500 | Msa0855230 | 0.828866 | 7.084497e-55 | -8.615850e-47 |
| Msa0343010 | Msa0855230 | 0.834028 | 3.798181e-56 | -8.615850e-47 |
| Msa0361910 | Msa0855230 | 0.806878 | 6.640318e-50 | -8.615850e-47 |
| Msa0483100 | Msa0855230 | 0.806615 | 7.546293e-50 | -8.615850e-47 |
| Msa0484570 | Msa0855230 | 0.806118 | 9.606379e-50 | -8.615850e-47 |
| Msa0498550 | Msa0855230 | 0.800313 | 1.528385e-48 | -8.615850e-47 |
| Msa0500570 | Msa0855230 | 0.826534 | 2.573598e-54 | -8.615850e-47 |
| Msa0509550 | Msa0855230 | 0.816907 | 4.341949e-52 | -8.615850e-47 |
| Msa0514500 | Msa0855230 | 0.802217 | 6.229227e-49 | -8.615850e-47 |
| Msa0514580 | Msa0855230 | 0.844725 | 6.329402e-59 | -8.615850e-47 |
| Msa0520260 | Msa0855230 | 0.802212 | 6.243513e-49 | -8.615850e-47 |
| Msa0520870 | Msa0855230 | 0.834844 | 2.369948e-56 | -8.615850e-47 |
| Msa0521680 | Msa0855230 | 0.843525 | 1.328462e-58 | -8.615850e-47 |
| Msa0524520 | Msa0855230 | 0.827133 | 1.851013e-54 | -8.615850e-47 |
| Msa0528570 | Msa0855230 | 0.801610 | 8.302665e-49 | -8.615850e-47 |
| Msa0529030 | Msa0855230 | 0.827529 | 1.488012e-54 | -8.615850e-47 |
| Msa0531960 | Msa0855230 | 0.849245 | 3.660630e-60 | -8.615850e-47 |
| Msa0550590 | Msa0855230 | 0.820169 | 7.905922e-53 | -8.615850e-47 |
| Msa0553750 | Msa0855230 | 0.815321 | 9.815445e-52 | -8.615850e-47 |
| Msa0556640 | Msa0855230 | 0.806000 | 1.017298e-49 | -8.615850e-47 |
| Msa0559100 | Msa0855230 | 0.818031 | 2.422711e-52 | -8.615850e-47 |
| Msa0561560 | Msa0855230 | 0.829930 | 3.907462e-55 | -8.615850e-47 |
| Msa0563740 | Msa0855230 | 0.846773 | 1.759603e-59 | -8.615850e-47 |
| Msa0567170 | Msa0855230 | 0.883741 | 3.470950e-71 | -8.615850e-47 |
| Msa0571620 | Msa0855230 | 0.804190 | 2.432642e-49 | -8.615850e-47 |
| Msa0577330 | Msa0855230 | 0.801662 | 8.102144e-49 | -8.615850e-47 |
| Msa0577450 | Msa0855230 | 0.802351 | 5.847164e-49 | -8.615850e-47 |
| Msa0577820 | Msa0855230 | 0.813431 | 2.569200e-51 | -8.615850e-47 |
| Msa0580370 | Msa0855230 | 0.844287 | 8.302537e-59 | -8.615850e-47 |
| Msa0580810 | Msa0855230 | 0.809169 | 2.161430e-50 | -8.615850e-47 |
| Msa0581840 | Msa0855230 | 0.829638 | 4.602917e-55 | -8.615850e-47 |
| Msa0588920 | Msa0855230 | 0.838144 | 3.423311e-57 | -8.615850e-47 |
| Msa0590200 | Msa0855230 | 0.838411 | 2.922345e-57 | -8.615850e-47 |
| Msa0593400 | Msa0855230 | 0.806087 | 9.753741e-50 | -8.615850e-47 |
| Msa0843050 | Msa0855230 | 0.816805 | 4.575790e-52 | -8.615850e-47 |
| Msa0851300 | Msa0855230 | 0.808703 | 2.718076e-50 | -8.615850e-47 |
| Msa0855230 | Msa0857800 | 0.802124 | 6.510419e-49 | -8.615850e-47 |
| Msa0855230 | Msa0863620 | 0.830642 | 2.618530e-55 | -8.615850e-47 |
| Msa0855230 | Msa0867110 | 0.843460 | 1.382172e-58 | -8.615850e-47 |
| Msa0855230 | Msa0879920 | 0.816835 | 4.506242e-52 | -8.615850e-47 |
| Msa0855230 | Msa0888790 | 0.836747 | 7.808377e-57 | -8.615850e-47 |
| Msa0855230 | Msa0909760 | 0.844883 | 5.736680e-59 | -8.615850e-47 |
| Msa0855230 | Msa0915520 | 0.822945 | 1.805425e-53 | -8.615850e-47 |
| Msa0855230 | Msa0924430 | 0.818040 | 2.411487e-52 | -8.615850e-47 |
| Msa0855230 | Msa0931590 | 0.873787 | 1.121630e-67 | -8.615850e-47 |
| Msa0855230 | Msa0966320 | 0.845957 | 2.936457e-59 | -8.615850e-47 |
| Msa0855230 | Msa0966480 | 0.846496 | 2.094121e-59 | -8.615850e-47 |
| Msa0855230 | Msa0989370 | 0.813704 | 2.236916e-51 | -8.615850e-47 |
| Msa0855230 | Msa0997920 | 0.842010 | 3.357680e-58 | -8.615850e-47 |
| Msa0855230 | Msa1002640 | 0.824451 | 8.015685e-54 | -8.615850e-47 |
| Msa0855230 | Msa1008170 | 0.832469 | 9.289676e-56 | -8.615850e-47 |
| Msa0855230 | Msa1008670 | 0.813259 | 2.802406e-51 | -8.615850e-47 |
| Msa0855230 | Msa1015250 | 0.800298 | 1.539154e-48 | -8.615850e-47 |
| Msa0855230 | Msa1033920 | 0.864161 | 1.483815e-64 | -8.615850e-47 |
| Msa0855230 | Msa1035570 | 0.821715 | 3.484216e-53 | -8.615850e-47 |
| Msa0855230 | Msa1035610 | 0.834535 | 2.834201e-56 | -8.615850e-47 |
| Msa0855230 | Msa1035650 | 0.801602 | 8.331777e-49 | -8.615850e-47 |
| Msa0855230 | Msa1037540 | 0.835457 | 1.660017e-56 | -8.615850e-47 |
| Msa0855230 | Msa1042160 | 0.832046 | 1.182076e-55 | -8.615850e-47 |
| Msa0855230 | Msa1042190 | 0.836888 | 7.184970e-57 | -8.615850e-47 |
| Msa0855230 | Msa1042880 | 0.827979 | 1.159968e-54 | -8.615850e-47 |
| Msa0855230 | Msa1056830 | 0.819091 | 1.393492e-52 | -8.615850e-47 |
| Msa0855230 | Msa1059020 | 0.823383 | 1.426452e-53 | -8.615850e-47 |
| Msa0855230 | Msa1072940 | 0.810805 | 9.604143e-51 | -8.615850e-47 |
| Msa0855230 | Msa1076020 | 0.814415 | 1.558458e-51 | -8.615850e-47 |
| Msa0855230 | Msa1078880 | 0.833561 | 4.970375e-56 | -8.615850e-47 |
| Msa0855230 | Msa1078970 | 0.825387 | 4.820659e-54 | -8.615850e-47 |
| Msa0855230 | Msa1081390 | 0.838420 | 2.906238e-57 | -8.615850e-47 |
| Msa0855230 | Msa1082380 | 0.812991 | 3.208620e-51 | -8.615850e-47 |
| Msa0855230 | Msa1084530 | 0.888153 | 7.600425e-73 | -8.615850e-47 |
| Msa0855230 | Msa1092420 | 0.849607 | 2.901951e-60 | -8.615850e-47 |
| Msa0855230 | Msa1094010 | 0.807445 | 5.037221e-50 | -8.615850e-47 |
| Msa0855230 | Msa1114630 | 0.823522 | 1.323753e-53 | -8.615850e-47 |
| Msa0855230 | Msa1116190 | 0.802835 | 4.646032e-49 | -8.615850e-47 |
| Msa0855230 | Msa1116220 | 0.839403 | 1.618148e-57 | -8.615850e-47 |
| Msa0855230 | Msa1116660 | 0.844463 | 7.445067e-59 | -8.615850e-47 |
| Msa0855230 | Msa1116740 | 0.807262 | 5.507786e-50 | -8.615850e-47 |
| Msa0855230 | Msa1123210 | 0.806130 | 9.551951e-50 | -8.615850e-47 |
| Msa0855230 | Msa1125820 | 0.888056 | 8.280131e-73 | -8.615850e-47 |
| Msa0855230 | Msa1125990 | 0.889501 | 2.289269e-73 | -8.615850e-47 |
| Msa0855230 | Msa1127280 | 0.829923 | 3.921828e-55 | -8.615850e-47 |
| Msa0855230 | Msa1127470 | 0.843839 | 1.094649e-58 | -8.615850e-47 |
| Msa0855230 | Msa1130420 | 0.813212 | 2.870064e-51 | -8.615850e-47 |
| Msa0855230 | Msa1132530 | 0.890561 | 8.813877e-74 | -8.615850e-47 |
| Msa0855230 | Msa1132840 | 0.843351 | 1.478452e-58 | -8.615850e-47 |
| Msa0855230 | Msa1147910 | 0.800686 | 1.282937e-48 | -8.615850e-47 |
| Msa0855230 | Msa1159590 | 0.807323 | 5.345226e-50 | -8.615850e-47 |
| Msa0855230 | Msa1162180 | 0.821377 | 4.171086e-53 | -8.615850e-47 |
| Msa0855230 | Msa1162880 | 0.851060 | 1.134720e-60 | -8.615850e-47 |
| Msa0855230 | Msa1165480 | 0.832518 | 9.031509e-56 | -8.615850e-47 |
| Msa0855230 | Msa1167470 | 0.830788 | 2.411260e-55 | -8.615850e-47 |
| Msa0855230 | Msa1169190 | 0.826408 | 2.758497e-54 | -8.615850e-47 |
| Msa0855230 | Msa1171290 | 0.879996 | 7.891031e-70 | -8.615850e-47 |
| Msa0855230 | Msa1190390 | 0.805461 | 1.320248e-49 | -8.615850e-47 |
| Msa0855230 | Msa1192570 | 0.854322 | 1.329535e-61 | -8.615850e-47 |
| Msa0855230 | Msa1200890 | 0.822411 | 2.402749e-53 | -8.615850e-47 |
| Msa0855230 | Msa1201540 | 0.825224 | 5.265889e-54 | -8.615850e-47 |
| Msa0855230 | Msa1201780 | 0.822854 | 1.895392e-53 | -8.615850e-47 |
| Msa0855230 | Msa1213830 | 0.813863 | 2.063444e-51 | -8.615850e-47 |
| Msa0855230 | Msa1214350 | 0.836263 | 1.036850e-56 | -8.615850e-47 |
| Msa0855230 | Msa1215870 | 0.865571 | 5.362332e-65 | -8.615850e-47 |
| Msa0855230 | Msa1215980 | 0.827277 | 1.709450e-54 | -8.615850e-47 |
| Msa0855230 | Msa1218820 | 0.851716 | 7.402586e-61 | -8.615850e-47 |
| Msa0855230 | Msa1223390 | 0.852431 | 4.638155e-61 | -8.615850e-47 |
| Msa0855230 | Msa1226520 | 0.886418 | 3.481383e-72 | -8.615850e-47 |
| Msa0855230 | Msa1240260 | 0.810951 | 8.928128e-51 | -8.615850e-47 |
| Msa0855230 | Msa1244240 | 0.821989 | 3.011366e-53 | -8.615850e-47 |
| Msa0855230 | Msa1254240 | 0.811606 | 6.436164e-51 | -8.615850e-47 |
| Msa0855230 | Msa1254540 | 0.864764 | 9.616376e-65 | -8.615850e-47 |
| Msa0855230 | Msa1260710 | 0.808981 | 2.370954e-50 | -8.615850e-47 |
| Msa0855230 | Msa1261050 | 0.817425 | 3.320132e-52 | -8.615850e-47 |
| Msa0855230 | Msa1263740 | 0.810013 | 1.423508e-50 | -8.615850e-47 |
| Msa0855230 | Msa1263780 | 0.848430 | 6.158600e-60 | -8.615850e-47 |
| Msa0855230 | Msa1263900 | 0.837241 | 5.838485e-57 | -8.615850e-47 |
| Msa0855230 | Msa1268630 | 0.802735 | 4.871951e-49 | -8.615850e-47 |
| Msa0855230 | Msa1294460 | 0.831045 | 2.085348e-55 | -8.615850e-47 |
| Msa0855230 | Msa1300460 | 0.838523 | 2.733922e-57 | -8.615850e-47 |
| Msa0855230 | Msa1301700 | 0.818666 | 1.740289e-52 | -8.615850e-47 |
| Msa0855230 | Msa1305780 | 0.818433 | 1.964961e-52 | -8.615850e-47 |
| Msa0855230 | Msa1306570 | 0.833786 | 4.366154e-56 | -8.615850e-47 |
| Msa0855230 | Msa1306790 | 0.816187 | 6.293172e-52 | -8.615850e-47 |
| Msa0855230 | Msa1307630 | 0.845434 | 4.072455e-59 | -8.615850e-47 |
| Msa0855230 | Msa1309090 | 0.804926 | 1.708320e-49 | -8.615850e-47 |
| Msa0855230 | Msa1332950 | 0.830180 | 3.395793e-55 | -8.615850e-47 |
| Msa0855230 | Msa1339170 | 0.831946 | 1.250985e-55 | -8.615850e-47 |
| Msa0855230 | Msa1343170 | 0.844191 | 8.809049e-59 | -8.615850e-47 |
| Msa0855230 | Msa1343180 | 0.868831 | 4.873121e-66 | -8.615850e-47 |
| Msa0855230 | Msa1343210 | 0.804405 | 2.194584e-49 | -8.615850e-47 |
| Msa0855230 | Msa1359690 | 0.858565 | 7.551348e-63 | -8.615850e-47 |
| Msa0855230 | Msa1359980 | 0.820924 | 5.302621e-53 | -8.615850e-47 |
| Msa0855230 | Msa1362130 | 0.845060 | 5.139587e-59 | -8.615850e-47 |
| Msa0855230 | Msa1364040 | 0.836556 | 8.734322e-57 | -8.615850e-47 |
| Msa0855230 | Msa1364410 | 0.811224 | 7.792023e-51 | -8.615850e-47 |
| Msa0855230 | Msa1366150 | 0.831678 | 1.456645e-55 | -8.615850e-47 |
| Msa0855230 | Msa1367180 | 0.834021 | 3.813568e-56 | -8.615850e-47 |
| Msa0855230 | Msa1368750 | 0.851023 | 1.162749e-60 | -8.615850e-47 |
| Msa0855230 | Msa1372040 | 0.810705 | 1.009193e-50 | -8.615850e-47 |
| Msa0855230 | Msa1374790 | 0.851234 | 1.013511e-60 | -8.615850e-47 |
| Msa0855230 | Msa1375350 | 0.835133 | 2.003752e-56 | -8.615850e-47 |
| Msa0855230 | Msa1380120 | 0.829967 | 3.826557e-55 | -8.615850e-47 |
| Msa0855230 | Msa1381180 | 0.813229 | 2.844777e-51 | -8.615850e-47 |
| Msa0855230 | Msa1381470 | 0.846290 | 2.383782e-59 | -8.615850e-47 |
| Msa0855230 | Msa1384150 | 0.842429 | 2.599346e-58 | -8.615850e-47 |
| Msa0855230 | Msa1387440 | 0.856496 | 3.093545e-62 | -8.615850e-47 |
| Msa0855230 | Msa1392580 | 0.808983 | 2.368873e-50 | -8.615850e-47 |
| Msa0855230 | Msa1397400 | 0.819830 | 9.449303e-53 | -8.615850e-47 |
| Msa0855230 | Msa1400010 | 0.801841 | 7.442853e-49 | -8.615850e-47 |
| Msa0855230 | Msa1405460 | 0.824902 | 6.276396e-54 | -8.615850e-47 |
| Msa0855230 | Msa1409410 | 0.835499 | 1.619538e-56 | -8.615850e-47 |
| Msa0855230 | Msa1415540 | 0.803426 | 3.506448e-49 | -8.615850e-47 |
| Msa0855230 | Msa1417060 | 0.811533 | 6.677602e-51 | -8.615850e-47 |
| Msa0855230 | Msa1420950 | 0.835324 | 1.792718e-56 | -8.615850e-47 |
| Msa0855230 | Msa1429070 | 0.833655 | 4.706603e-56 | -8.615850e-47 |
| Msa0855230 | Msa1437930 | 0.815087 | 1.106503e-51 | -8.615850e-47 |
| Msa0855230 | Msa1442260 | 0.809393 | 1.934422e-50 | -8.615850e-47 |
| Msa0855230 | Msa1445120 | 0.859699 | 3.453331e-63 | -8.615850e-47 |
| Msa0855230 | Msa1446100 | 0.829773 | 4.267052e-55 | -8.615850e-47 |
| Msa0855230 | Msa1447170 | 0.826377 | 2.804703e-54 | -8.615850e-47 |
| Msa0855230 | Msa1450190 | 0.849635 | 2.849904e-60 | -8.615850e-47 |
| Msa0855230 | Msa1451820 | 0.853253 | 2.700038e-61 | -8.615850e-47 |
| Msa0855230 | Msa1454010 | 0.814670 | 1.368753e-51 | -8.615850e-47 |
| Msa0855230 | Msa1465360 | 0.807760 | 4.317982e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0855230 | MtrunA17_Chr5g0433181 | 95.599 | 659 | 16 | 5 | 1 | 654 | 1 | 651 | 0.0 | 1257 |
| Msa0855230 | MtrunA17_Chr3g0109071 | 40.873 | 756 | 249 | 25 | 1 | 650 | 1 | 664 | 1.18e-107 | 340 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0855230 | AT5G37010.1 | 36.313 | 716 | 281 | 32 | 1 | 648 | 1 | 609 | 9.33e-72 | 244 |
| Msa0855230 | AT1G65710.1 | 37.055 | 618 | 208 | 25 | 1 | 600 | 1 | 455 | 1.44e-59 | 207 |
Find 140 sgRNAs with CRISPR-Local
Find 181 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATGGTGAAATGGGGTTTA+AGG | 0.156691 | 5_4:+48395734 | None:intergenic |
| TCATGATCATTTACAACTTC+TGG | 0.158367 | 5_4:+48395494 | None:intergenic |
| CAATGGAACATTTGTTCTTC+TGG | 0.205146 | 5_4:-48393301 | Msa0855230:CDS |
| AACAGTAATGGTTCTGGTTC+AGG | 0.276473 | 5_4:-48394873 | Msa0855230:CDS |
| AGATTAAGCAGAAGCTCTTC+TGG | 0.279054 | 5_4:-48395224 | Msa0855230:CDS |
| CTAAGAGGGTTTCTTCTATA+AGG | 0.281468 | 5_4:+48394570 | None:intergenic |
| GGAAGAAGATCTTCTGAAAA+TGG | 0.284257 | 5_4:-48394912 | Msa0855230:CDS |
| ACATTCCCATTTCCTCTTGC+AGG | 0.287911 | 5_4:+48394657 | None:intergenic |
| CGTTGATCTCTTTCTCTACT+TGG | 0.292517 | 5_4:+48394972 | None:intergenic |
| TGTGGATAAGCAAGTGAATT+AGG | 0.300136 | 5_4:+48394537 | None:intergenic |
| GAAGAAGAAGAAGCTTTCTT+TGG | 0.300588 | 5_4:+48395014 | None:intergenic |
| GGTGGATTGGTTAGAGGTTC+GGG | 0.304904 | 5_4:+48393667 | None:intergenic |
| TTGTACTAGGCCAGGGAAAA+TGG | 0.305744 | 5_4:-48394850 | Msa0855230:CDS |
| AAAGCTTCTTCTTCTTCTAA+TGG | 0.317765 | 5_4:-48395008 | Msa0855230:CDS |
| TTGTCCCTCATTTCAACATT+TGG | 0.318273 | 5_4:+48393874 | None:intergenic |
| TTGAATTTCATATGAGGTAG+TGG | 0.322594 | 5_4:+48395761 | None:intergenic |
| AACAATTGAAATGGTGAAAT+GGG | 0.323280 | 5_4:+48395726 | None:intergenic |
| TGGTGGATTGGTTAGAGGTT+CGG | 0.323939 | 5_4:+48393666 | None:intergenic |
| ATTTCACCATTTCAATTGTT+AGG | 0.327114 | 5_4:-48395723 | Msa0855230:five_prime_UTR |
| CATGATCATTTACAACTTCT+GGG | 0.327537 | 5_4:+48395495 | None:intergenic |
| ATGTCACCTGCAAGAGGAAA+TGG | 0.328874 | 5_4:-48394663 | Msa0855230:CDS |
| TCTTCAGCTAGGAAATATTC+TGG | 0.337380 | 5_4:-48395185 | Msa0855230:CDS |
| AAGCTTTCTTTGGTGAATTC+CGG | 0.339092 | 5_4:+48395024 | None:intergenic |
| ATCATTGAACAGCAACAATA+AGG | 0.348913 | 5_4:-48395321 | Msa0855230:CDS |
| ATGATTAAGATTAAGACATT+TGG | 0.349479 | 5_4:-48393152 | Msa0855230:three_prime_UTR |
| CCACAATCAAATGCTAATAA+TGG | 0.358815 | 5_4:-48394519 | Msa0855230:CDS |
| TACTGTTACATCATTGGTTA+TGG | 0.360201 | 5_4:-48394814 | Msa0855230:CDS |
| GATTCTACAAATGATGATTC+AGG | 0.361087 | 5_4:+48393457 | None:intergenic |
| TAACAATTGAAATGGTGAAA+TGG | 0.361127 | 5_4:+48395725 | None:intergenic |
| GATGAACAAAAGAGAGTTCA+TGG | 0.370002 | 5_4:-48395104 | Msa0855230:CDS |
| TCCTGCTACTGTTACATCAT+TGG | 0.374850 | 5_4:-48394820 | Msa0855230:CDS |
| GTTTGTGGTGGATTGGTTAG+AGG | 0.379183 | 5_4:+48393661 | None:intergenic |
| AATTGAAGCTGAGACTATTC+AGG | 0.383102 | 5_4:-48394463 | Msa0855230:intron |
| CTGGTGATTCATCGGATTGT+TGG | 0.383426 | 5_4:-48393282 | Msa0855230:CDS |
| AGTTTGATATTTCTTCTGTT+TGG | 0.384721 | 5_4:-48393087 | Msa0855230:three_prime_UTR |
| TGCTTAAACATGCACCCATT+TGG | 0.391903 | 5_4:+48395687 | None:intergenic |
| TGTGAGGATCAGGAGAGTTC+AGG | 0.395032 | 5_4:-48393358 | Msa0855230:CDS |
| GTGGAGGAGAAGGTGTTAAG+AGG | 0.397596 | 5_4:-48394776 | Msa0855230:CDS |
| TTGATATTTCTTCTGTTTGG+TGG | 0.414171 | 5_4:-48393084 | Msa0855230:three_prime_UTR |
| TGGTTCACTTTGTGAGGATC+AGG | 0.416836 | 5_4:-48393368 | Msa0855230:CDS |
| GTTCTGGTTCAGGTTGTACT+AGG | 0.417475 | 5_4:-48394863 | Msa0855230:CDS |
| CAGCAGAGTTGCTATGGAAA+AGG | 0.418147 | 5_4:-48393833 | Msa0855230:CDS |
| AAGTGATTTGGTGGAAGAAA+GGG | 0.427395 | 5_4:+48395628 | None:intergenic |
| CGGAGAGTGAGTAGATCTCC+TGG | 0.430572 | 5_4:-48394933 | Msa0855230:CDS |
| TGATATTTCTTCTGTTTGGT+GGG | 0.430604 | 5_4:-48393083 | Msa0855230:three_prime_UTR |
| TAAGATCAGCAACAGCTTCA+AGG | 0.433635 | 5_4:+48393533 | None:intergenic |
| CATCAGCATAGTGGTGGTAT+TGG | 0.433740 | 5_4:-48393208 | Msa0855230:CDS |
| GGAAATTTGAATTTCATATG+AGG | 0.433900 | 5_4:+48395755 | None:intergenic |
| GTTCCATCACAACAAAATGA+TGG | 0.444007 | 5_4:-48395368 | Msa0855230:CDS |
| AAGAATGTGGTGATGCCATC+AGG | 0.447953 | 5_4:-48393742 | Msa0855230:CDS |
| GGTTCAGGTTGTACTAGGCC+AGG | 0.450436 | 5_4:-48394858 | Msa0855230:CDS |
| ATGTCACCTGCTAGAGGGAA+TGG | 0.452778 | 5_4:-48394717 | Msa0855230:CDS |
| TGAGGGACAACACAAGAAAC+AGG | 0.453620 | 5_4:-48393861 | Msa0855230:CDS |
| GGTCACAAACACAAACCAAA+TGG | 0.456343 | 5_4:-48395702 | Msa0855230:exon |
| AACAATAACAGTAATGGTTC+TGG | 0.460724 | 5_4:-48394879 | Msa0855230:CDS |
| AAAGTGATTTGGTGGAAGAA+AGG | 0.463048 | 5_4:+48395627 | None:intergenic |
| GGTTAGAGGTTCGGGATTGA+CGG | 0.468774 | 5_4:+48393675 | None:intergenic |
| TTGTTCTTCTGGTGATTCAT+CGG | 0.470946 | 5_4:-48393290 | Msa0855230:CDS |
| CCACACGAAGGAACAACAAC+AGG | 0.477360 | 5_4:-48393800 | Msa0855230:CDS |
| CAACAAGTTCAACTTTCTCT+AGG | 0.479383 | 5_4:-48393504 | Msa0855230:CDS |
| GTATGTGGTTTGTGGTGGAT+TGG | 0.479396 | 5_4:+48393654 | None:intergenic |
| AGTAACAATGGTGGAGGAGA+AGG | 0.480978 | 5_4:-48394786 | Msa0855230:CDS |
| ATCAGCAACCTTCTCTTAGC+AGG | 0.482494 | 5_4:-48394623 | Msa0855230:CDS |
| TTCGAGATTGAATTCAAAAG+AGG | 0.485046 | 5_4:-48393257 | Msa0855230:CDS |
| ATCACAACAAAATGATGGGT+TGG | 0.488194 | 5_4:-48395363 | Msa0855230:CDS |
| AATGAAGTGTATGTGGTTTG+TGG | 0.490618 | 5_4:+48393646 | None:intergenic |
| CTTCTTCTTCTTCTAATGGA+AGG | 0.491446 | 5_4:-48395004 | Msa0855230:CDS |
| AGCAGAGTTGCTATGGAAAA+GGG | 0.493636 | 5_4:-48393832 | Msa0855230:CDS |
| TTGTGACCTAACAATTGAAA+TGG | 0.493715 | 5_4:+48395717 | None:intergenic |
| GACAAACAGCAGAGTTGCTA+TGG | 0.496318 | 5_4:-48393839 | Msa0855230:CDS |
| ACCAATGATGTAACAGTAGC+AGG | 0.497665 | 5_4:+48394819 | None:intergenic |
| TTAGGATCAACCTCACTAAG+AGG | 0.500068 | 5_4:+48394555 | None:intergenic |
| GGGTGTGGAAAGTGATTTGG+TGG | 0.502086 | 5_4:+48395619 | None:intergenic |
| GATATTTCTTCTGTTTGGTG+GGG | 0.502767 | 5_4:-48393082 | Msa0855230:three_prime_UTR |
| CCTGTTGTTGTTCCTTCGTG+TGG | 0.502796 | 5_4:+48393800 | None:intergenic |
| GTCACATACTTATGTAAACT+TGG | 0.509026 | 5_4:+48393403 | None:intergenic |
| TGTCACCTGCAAGAGGAAAT+GGG | 0.509249 | 5_4:-48394662 | Msa0855230:CDS |
| TGTCACCTGCTAGAGGGAAT+GGG | 0.515047 | 5_4:-48394716 | Msa0855230:CDS |
| AGAGAAAGTTGAACTTGTTG+TGG | 0.518782 | 5_4:+48393507 | None:intergenic |
| CTGCTACTTCTTCTTCAGCT+AGG | 0.521567 | 5_4:-48395196 | Msa0855230:CDS |
| CCATTATTAGCATTTGATTG+TGG | 0.522575 | 5_4:+48394519 | None:intergenic |
| TGGAGGAGAAGGTGTTAAGA+GGG | 0.522678 | 5_4:-48394775 | Msa0855230:CDS |
| CATAGTGGTGGTATTGGACG+TGG | 0.522968 | 5_4:-48393202 | Msa0855230:CDS |
| CTGCTTCTTGTAATCCCTGA+TGG | 0.525661 | 5_4:+48393727 | None:intergenic |
| GTCACAAACACAAACCAAAT+GGG | 0.526346 | 5_4:-48395701 | Msa0855230:exon |
| ATAACCATCGTCCGCGTCAC+CGG | 0.527857 | 5_4:-48395043 | Msa0855230:CDS |
| CCATTCCCATTCCCTCTAGC+AGG | 0.529797 | 5_4:+48394711 | None:intergenic |
| GAGAGGTGGTTCACTTTGTG+AGG | 0.532630 | 5_4:-48393374 | Msa0855230:CDS |
| CAAGCTTTGTTGAGACAAGC+TGG | 0.533501 | 5_4:+48393562 | None:intergenic |
| AAGTAGTAATGAAGTGTATG+TGG | 0.536079 | 5_4:+48393639 | None:intergenic |
| TGAATTTCATATGAGGTAGT+GGG | 0.538489 | 5_4:+48395762 | None:intergenic |
| AGTGATTTGGTGGAAGAAAG+GGG | 0.543930 | 5_4:+48395629 | None:intergenic |
| ACAACAACAGGAAGAGATCA+AGG | 0.544746 | 5_4:-48393788 | Msa0855230:CDS |
| GATAAAAGTAACAATGGTGG+AGG | 0.545003 | 5_4:-48394792 | Msa0855230:CDS |
| TTCCATCACAACAAAATGAT+GGG | 0.545629 | 5_4:-48395367 | Msa0855230:CDS |
| AGAAACCAAATGTTGAAATG+AGG | 0.549758 | 5_4:-48393879 | Msa0855230:CDS |
| GAAACCAAATGTTGAAATGA+GGG | 0.552067 | 5_4:-48393878 | Msa0855230:CDS |
| CAATCAAATGCTAATAATGG+TGG | 0.560234 | 5_4:-48394516 | Msa0855230:CDS |
| TTGAACAGCAACAATAAGGT+TGG | 0.562041 | 5_4:-48395317 | Msa0855230:CDS |
| AACAACAACAATAACAGTAA+TGG | 0.562799 | 5_4:-48394885 | Msa0855230:CDS |
| GTTATGGATAAAAGTAACAA+TGG | 0.571865 | 5_4:-48394798 | Msa0855230:CDS |
| ATCAGCAACAGCTTCAAGGA+TGG | 0.572404 | 5_4:+48393537 | None:intergenic |
| GAGTTATTCCTGCTAAGAGA+AGG | 0.573600 | 5_4:+48394615 | None:intergenic |
| CCTGCTAGAGGGAATGGGAA+TGG | 0.579044 | 5_4:-48394711 | Msa0855230:CDS |
| CGTTCAATGTCACCTGCAAG+AGG | 0.592581 | 5_4:-48394669 | Msa0855230:CDS |
| TTAGCAGGAATAACTCTGCA+AGG | 0.592969 | 5_4:-48394608 | Msa0855230:CDS |
| TAGGATCAACCTCACTAAGA+GGG | 0.593512 | 5_4:+48394556 | None:intergenic |
| ATGAACAAAAGAGAGTTCAT+GGG | 0.597175 | 5_4:-48395103 | Msa0855230:CDS |
| AATAAGGTTGGTAGTGCTGT+TGG | 0.597807 | 5_4:-48395305 | Msa0855230:CDS |
| AGGAATATGATGGTGTTGCT+CGG | 0.600454 | 5_4:-48395067 | Msa0855230:CDS |
| CGTTCAATGTCACCTGCTAG+AGG | 0.601341 | 5_4:-48394723 | Msa0855230:CDS |
| TATGTGACTGTTAAGAGAGG+TGG | 0.603741 | 5_4:-48393388 | Msa0855230:CDS |
| GAAGTGTATGTGGTTTGTGG+TGG | 0.604257 | 5_4:+48393649 | None:intergenic |
| GAGTGTGATCATCAGCATAG+TGG | 0.606136 | 5_4:-48393217 | Msa0855230:CDS |
| CAATGATGCAATTTCAGCTG+AGG | 0.608354 | 5_4:-48395126 | Msa0855230:CDS |
| TTTGGTGAATTCCGGTGACG+CGG | 0.608706 | 5_4:+48395032 | None:intergenic |
| GTTCAGGTTGTACTAGGCCA+GGG | 0.608850 | 5_4:-48394857 | Msa0855230:CDS |
| GGAAACAAAGTTCAGAACAA+AGG | 0.613680 | 5_4:-48394495 | Msa0855230:CDS |
| AATAGCTTCACTGTGAGTAG+TGG | 0.614600 | 5_4:-48393331 | Msa0855230:CDS |
| TGAGTAGTGGTCAACAACAA+TGG | 0.614677 | 5_4:-48393318 | Msa0855230:CDS |
| ATGGATAAAAGTAACAATGG+TGG | 0.618521 | 5_4:-48394795 | Msa0855230:CDS |
| TTGAGTTTGAGATCCGTTGG+AGG | 0.621094 | 5_4:+48395886 | None:intergenic |
| GATAACAGTGAGGAATATGA+TGG | 0.621876 | 5_4:-48395077 | Msa0855230:CDS |
| TGTTGTGAGTGATGATGTGA+TGG | 0.622257 | 5_4:-48393428 | Msa0855230:CDS |
| ACAATTGAAATGGTGAAATG+GGG | 0.623246 | 5_4:+48395727 | None:intergenic |
| TAGAAGAAACCCTCTTAGTG+AGG | 0.626845 | 5_4:-48394565 | Msa0855230:CDS |
| AACGTTCGAGTAGTAGAGAA+CGG | 0.630171 | 5_4:-48394953 | Msa0855230:CDS |
| GTGATTTGGTGGAAGAAAGG+GGG | 0.632458 | 5_4:+48395630 | None:intergenic |
| AATTCCGGTGACGCGGACGA+TGG | 0.635607 | 5_4:+48395039 | None:intergenic |
| GTTCAATGTCACCTGCTAGA+GGG | 0.636297 | 5_4:-48394722 | Msa0855230:CDS |
| CAAGCTGGAAGAGAAACAGA+AGG | 0.639034 | 5_4:+48393577 | None:intergenic |
| ACATTGTGTTGAACAGTGAA+AGG | 0.652397 | 5_4:+48395389 | None:intergenic |
| AGAATGTGGTGATGCCATCA+GGG | 0.662260 | 5_4:-48393741 | Msa0855230:CDS |
| TGTGATCATCAGCATAGTGG+TGG | 0.669655 | 5_4:-48393214 | Msa0855230:CDS |
| GATGCAATTCTAATTCAATG+TGG | 0.677750 | 5_4:-48395248 | Msa0855230:CDS |
| CTAGCAGGTGACATTGAACG+TGG | 0.678229 | 5_4:+48394726 | None:intergenic |
| GGGTGTGAATTGCCACACGA+AGG | 0.680878 | 5_4:-48393812 | Msa0855230:CDS |
| AAGTATGTGACTGTTAAGAG+AGG | 0.686254 | 5_4:-48393391 | Msa0855230:CDS |
| TAATGCTATTGTGAAGAATG+TGG | 0.688273 | 5_4:-48393755 | Msa0855230:CDS |
| TCATGGGAGTGATAACAGTG+AGG | 0.744139 | 5_4:-48395087 | Msa0855230:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACAAAAAATAAAAATTTACT+TGG | + | chr5_4:48394464-48394483 | None:intergenic | 10.0% |
| !!! | ATGATAAAAATCTCTTTTTT+TGG | + | chr5_4:48393348-48393367 | None:intergenic | 15.0% |
| !! | TGAAATTATAAAACAATCAT+TGG | + | chr5_4:48394516-48394535 | None:intergenic | 15.0% |
| !!! | GTTTTATAATTTCATAGAAA+TGG | - | chr5_4:48394522-48394541 | Msa0855230:CDS | 15.0% |
| !! | AATATAGATAGATAATGATG+TGG | - | chr5_4:48394437-48394456 | Msa0855230:intron | 20.0% |
| !!! | CATATTTTTTCTTAATCATC+CGG | + | chr5_4:48394756-48394775 | None:intergenic | 20.0% |
| !!! | GACATGAAATTTGAAATTAT+TGG | + | chr5_4:48394815-48394834 | None:intergenic | 20.0% |
| !! | TCATGTCATAACAAAATTAA+TGG | - | chr5_4:48394828-48394847 | Msa0855230:CDS | 20.0% |
| !! | TAAGAATGTACATAAAATGA+TGG | + | chr5_4:48394888-48394907 | None:intergenic | 20.0% |
| !! | ATGATTAAGATTAAGACATT+TGG | - | chr5_4:48395660-48395679 | Msa0855230:CDS | 20.0% |
| !! | TAATGAAAAACACATAAAAG+AGG | + | chr5_4:48395775-48395794 | None:intergenic | 20.0% |
| ! | GGAAATTTGAATTTCATATG+AGG | + | chr5_4:48393060-48393079 | None:intergenic | 25.0% |
| ! | AACAATTGAAATGGTGAAAT+GGG | + | chr5_4:48393089-48393108 | None:intergenic | 25.0% |
| ! | TAACAATTGAAATGGTGAAA+TGG | + | chr5_4:48393090-48393109 | None:intergenic | 25.0% |
| ! | ATTTCACCATTTCAATTGTT+AGG | - | chr5_4:48393089-48393108 | Msa0855230:three_prime_UTR | 25.0% |
| !!! | AGAATGTTTTTGTTGAATTG+GGG | + | chr5_4:48393217-48393236 | None:intergenic | 25.0% |
| !!! | CAGAATGTTTTTGTTGAATT+GGG | + | chr5_4:48393218-48393237 | None:intergenic | 25.0% |
| !!! | TCAGAATGTTTTTGTTGAAT+TGG | + | chr5_4:48393219-48393238 | None:intergenic | 25.0% |
| !!! | TTTTCTCTCTTTTTTCATCA+TGG | + | chr5_4:48393386-48393405 | None:intergenic | 25.0% |
| ! | AACAACAACAATAACAGTAA+TGG | - | chr5_4:48393927-48393946 | Msa0855230:intron | 25.0% |
| ! | GTTATGGATAAAAGTAACAA+TGG | - | chr5_4:48394014-48394033 | Msa0855230:intron | 25.0% |
| ! | TGATTAAGGTTGAATAGTTT+CGG | - | chr5_4:48394631-48394650 | Msa0855230:CDS | 25.0% |
| ! | GCTAAAAATTGTTACACTAA+GGG | + | chr5_4:48394673-48394692 | None:intergenic | 25.0% |
| ! | AGCTAAAAATTGTTACACTA+AGG | + | chr5_4:48394674-48394693 | None:intergenic | 25.0% |
| ! | AGTTTGATATTTCTTCTGTT+TGG | - | chr5_4:48395725-48395744 | Msa0855230:five_prime_UTR | 25.0% |
| TGAATTTCATATGAGGTAGT+GGG | + | chr5_4:48393053-48393072 | None:intergenic | 30.0% | |
| TTGAATTTCATATGAGGTAG+TGG | + | chr5_4:48393054-48393073 | None:intergenic | 30.0% | |
| ACAATTGAAATGGTGAAATG+GGG | + | chr5_4:48393088-48393107 | None:intergenic | 30.0% | |
| TTGTGACCTAACAATTGAAA+TGG | + | chr5_4:48393098-48393117 | None:intergenic | 30.0% | |
| !! | GAATGTTTTTGTTGAATTGG+GGG | + | chr5_4:48393216-48393235 | None:intergenic | 30.0% |
| CATGATCATTTACAACTTCT+GGG | + | chr5_4:48393320-48393339 | None:intergenic | 30.0% | |
| TCATGATCATTTACAACTTC+TGG | + | chr5_4:48393321-48393340 | None:intergenic | 30.0% | |
| TTCCATCACAACAAAATGAT+GGG | - | chr5_4:48393445-48393464 | Msa0855230:CDS | 30.0% | |
| ATCATTGAACAGCAACAATA+AGG | - | chr5_4:48393491-48393510 | Msa0855230:CDS | 30.0% | |
| GATGCAATTCTAATTCAATG+TGG | - | chr5_4:48393564-48393583 | Msa0855230:CDS | 30.0% | |
| ATGAACAAAAGAGAGTTCAT+GGG | - | chr5_4:48393709-48393728 | Msa0855230:CDS | 30.0% | |
| AAAGCTTCTTCTTCTTCTAA+TGG | - | chr5_4:48393804-48393823 | Msa0855230:CDS | 30.0% | |
| AACAATAACAGTAATGGTTC+TGG | - | chr5_4:48393933-48393952 | Msa0855230:intron | 30.0% | |
| ! | TACTGTTACATCATTGGTTA+TGG | - | chr5_4:48393998-48394017 | Msa0855230:intron | 30.0% |
| ATGGATAAAAGTAACAATGG+TGG | - | chr5_4:48394017-48394036 | Msa0855230:intron | 30.0% | |
| CCATTATTAGCATTTGATTG+TGG | + | chr5_4:48394296-48394315 | None:intergenic | 30.0% | |
| CCACAATCAAATGCTAATAA+TGG | - | chr5_4:48394293-48394312 | Msa0855230:intron | 30.0% | |
| CAATCAAATGCTAATAATGG+TGG | - | chr5_4:48394296-48394315 | Msa0855230:intron | 30.0% | |
| AGTTCAGAACAAAGGAAAAA+AGG | - | chr5_4:48394325-48394344 | Msa0855230:intron | 30.0% | |
| TGGTTAATGTGCTTTGATTA+AGG | - | chr5_4:48394617-48394636 | Msa0855230:CDS | 30.0% | |
| AGAAACCAAATGTTGAAATG+AGG | - | chr5_4:48394933-48394952 | Msa0855230:CDS | 30.0% | |
| GAAACCAAATGTTGAAATGA+GGG | - | chr5_4:48394934-48394953 | Msa0855230:CDS | 30.0% | |
| TAATGCTATTGTGAAGAATG+TGG | - | chr5_4:48395057-48395076 | Msa0855230:CDS | 30.0% | |
| AAGTAGTAATGAAGTGTATG+TGG | + | chr5_4:48395176-48395195 | None:intergenic | 30.0% | |
| GATTCTACAAATGATGATTC+AGG | + | chr5_4:48395358-48395377 | None:intergenic | 30.0% | |
| GTCACATACTTATGTAAACT+TGG | + | chr5_4:48395412-48395431 | None:intergenic | 30.0% | |
| TTCGAGATTGAATTCAAAAG+AGG | - | chr5_4:48395555-48395574 | Msa0855230:CDS | 30.0% | |
| TTGATATTTCTTCTGTTTGG+TGG | - | chr5_4:48395728-48395747 | Msa0855230:five_prime_UTR | 30.0% | |
| TGATATTTCTTCTGTTTGGT+GGG | - | chr5_4:48395729-48395748 | Msa0855230:five_prime_UTR | 30.0% | |
| !!! | TTTTTGAGTTTGAGATCCGT+TGG | + | chr5_4:48392932-48392951 | None:intergenic | 35.0% |
| AAATGGTGAAATGGGGTTTA+AGG | + | chr5_4:48393081-48393100 | None:intergenic | 35.0% | |
| GTCACAAACACAAACCAAAT+GGG | - | chr5_4:48393111-48393130 | Msa0855230:three_prime_UTR | 35.0% | |
| !! | AAGTGATTTGGTGGAAGAAA+GGG | + | chr5_4:48393187-48393206 | None:intergenic | 35.0% |
| !! | AAAGTGATTTGGTGGAAGAA+AGG | + | chr5_4:48393188-48393207 | None:intergenic | 35.0% |
| !!! | GCTGTTTTTGTTGTTCTTGA+GGG | + | chr5_4:48393271-48393290 | None:intergenic | 35.0% |
| !!! | TGCTGTTTTTGTTGTTCTTG+AGG | + | chr5_4:48393272-48393291 | None:intergenic | 35.0% |
| !! | AGTGAAAGGTGTGATTTTGA+TGG | + | chr5_4:48393412-48393431 | None:intergenic | 35.0% |
| ACATTGTGTTGAACAGTGAA+AGG | + | chr5_4:48393426-48393445 | None:intergenic | 35.0% | |
| GTTCCATCACAACAAAATGA+TGG | - | chr5_4:48393444-48393463 | Msa0855230:CDS | 35.0% | |
| !! | AACCCATCATTTTGTTGTGA+TGG | + | chr5_4:48393450-48393469 | None:intergenic | 35.0% |
| !! | ATCACAACAAAATGATGGGT+TGG | - | chr5_4:48393449-48393468 | Msa0855230:CDS | 35.0% |
| TTGAACAGCAACAATAAGGT+TGG | - | chr5_4:48393495-48393514 | Msa0855230:CDS | 35.0% | |
| TCTTCAGCTAGGAAATATTC+TGG | - | chr5_4:48393627-48393646 | Msa0855230:CDS | 35.0% | |
| GATGAACAAAAGAGAGTTCA+TGG | - | chr5_4:48393708-48393727 | Msa0855230:CDS | 35.0% | |
| GATAACAGTGAGGAATATGA+TGG | - | chr5_4:48393735-48393754 | Msa0855230:CDS | 35.0% | |
| AAGCTTTCTTTGGTGAATTC+CGG | + | chr5_4:48393791-48393810 | None:intergenic | 35.0% | |
| GAAGAAGAAGAAGCTTTCTT+TGG | + | chr5_4:48393801-48393820 | None:intergenic | 35.0% | |
| CTTCTTCTTCTTCTAATGGA+AGG | - | chr5_4:48393808-48393827 | Msa0855230:CDS | 35.0% | |
| ! | TTTTCAGAAGATCTTCTTCC+AGG | + | chr5_4:48393900-48393919 | None:intergenic | 35.0% |
| ! | GGAAGAAGATCTTCTGAAAA+TGG | - | chr5_4:48393900-48393919 | Msa0855230:intron | 35.0% |
| GATAAAAGTAACAATGGTGG+AGG | - | chr5_4:48394020-48394039 | Msa0855230:intron | 35.0% | |
| CTAAGAGGGTTTCTTCTATA+AGG | + | chr5_4:48394245-48394264 | None:intergenic | 35.0% | |
| TGTGGATAAGCAAGTGAATT+AGG | + | chr5_4:48394278-48394297 | None:intergenic | 35.0% | |
| GGAAACAAAGTTCAGAACAA+AGG | - | chr5_4:48394317-48394336 | Msa0855230:intron | 35.0% | |
| AATTGAAGCTGAGACTATTC+AGG | - | chr5_4:48394349-48394368 | Msa0855230:intron | 35.0% | |
| ATCAAGTGTTTGAGCTTCAA+TGG | - | chr5_4:48394597-48394616 | Msa0855230:CDS | 35.0% | |
| ! | CATAAAATGATGGTGCTCAT+AGG | + | chr5_4:48394878-48394897 | None:intergenic | 35.0% |
| TTGTCCCTCATTTCAACATT+TGG | + | chr5_4:48394941-48394960 | None:intergenic | 35.0% | |
| AATGAAGTGTATGTGGTTTG+TGG | + | chr5_4:48395169-48395188 | None:intergenic | 35.0% | |
| ! | GTTGTGTTGTGTTCTTTTGA+TGG | + | chr5_4:48395216-48395235 | None:intergenic | 35.0% |
| !! | AGAGAAAGTTGAACTTGTTG+TGG | + | chr5_4:48395308-48395327 | None:intergenic | 35.0% |
| CAACAAGTTCAACTTTCTCT+AGG | - | chr5_4:48395308-48395327 | Msa0855230:CDS | 35.0% | |
| AAGTATGTGACTGTTAAGAG+AGG | - | chr5_4:48395421-48395440 | Msa0855230:CDS | 35.0% | |
| CAATGGAACATTTGTTCTTC+TGG | - | chr5_4:48395511-48395530 | Msa0855230:CDS | 35.0% | |
| TTGTTCTTCTGGTGATTCAT+CGG | - | chr5_4:48395522-48395541 | Msa0855230:CDS | 35.0% | |
| ! | GATATTTCTTCTGTTTGGTG+GGG | - | chr5_4:48395730-48395749 | Msa0855230:five_prime_UTR | 35.0% |
| GGTCACAAACACAAACCAAA+TGG | - | chr5_4:48393110-48393129 | Msa0855230:three_prime_UTR | 40.0% | |
| TGCTTAAACATGCACCCATT+TGG | + | chr5_4:48393128-48393147 | None:intergenic | 40.0% | |
| !! | AGTGATTTGGTGGAAGAAAG+GGG | + | chr5_4:48393186-48393205 | None:intergenic | 40.0% |
| ! | TTTTTGTTGAATTGGGGGTG+TGG | + | chr5_4:48393211-48393230 | None:intergenic | 40.0% |
| !! | AATAAGGTTGGTAGTGCTGT+TGG | - | chr5_4:48393507-48393526 | Msa0855230:CDS | 40.0% |
| AGATTAAGCAGAAGCTCTTC+TGG | - | chr5_4:48393588-48393607 | Msa0855230:CDS | 40.0% | |
| CAATGATGCAATTTCAGCTG+AGG | - | chr5_4:48393686-48393705 | Msa0855230:CDS | 40.0% | |
| !! | AGGAATATGATGGTGTTGCT+CGG | - | chr5_4:48393745-48393764 | Msa0855230:CDS | 40.0% |
| CGTTGATCTCTTTCTCTACT+TGG | + | chr5_4:48393843-48393862 | None:intergenic | 40.0% | |
| AACGTTCGAGTAGTAGAGAA+CGG | - | chr5_4:48393859-48393878 | Msa0855230:CDS | 40.0% | |
| !! | AACAGTAATGGTTCTGGTTC+AGG | - | chr5_4:48393939-48393958 | Msa0855230:intron | 40.0% |
| TCCTGCTACTGTTACATCAT+TGG | - | chr5_4:48393992-48394011 | Msa0855230:intron | 40.0% | |
| ACCAATGATGTAACAGTAGC+AGG | + | chr5_4:48393996-48394015 | None:intergenic | 40.0% | |
| GAGTTATTCCTGCTAAGAGA+AGG | + | chr5_4:48394200-48394219 | None:intergenic | 40.0% | |
| TTAGCAGGAATAACTCTGCA+AGG | - | chr5_4:48394204-48394223 | Msa0855230:intron | 40.0% | |
| TAGAAGAAACCCTCTTAGTG+AGG | - | chr5_4:48394247-48394266 | Msa0855230:intron | 40.0% | |
| TAGGATCAACCTCACTAAGA+GGG | + | chr5_4:48394259-48394278 | None:intergenic | 40.0% | |
| TTAGGATCAACCTCACTAAG+AGG | + | chr5_4:48394260-48394279 | None:intergenic | 40.0% | |
| ! | TTTGGTTTCTGCAGTGGATA+TGG | + | chr5_4:48394923-48394942 | None:intergenic | 40.0% |
| ! | TCAACATTTGGTTTCTGCAG+TGG | + | chr5_4:48394929-48394948 | None:intergenic | 40.0% |
| AGCAGAGTTGCTATGGAAAA+GGG | - | chr5_4:48394980-48394999 | Msa0855230:CDS | 40.0% | |
| ACAACAACAGGAAGAGATCA+AGG | - | chr5_4:48395024-48395043 | Msa0855230:CDS | 40.0% | |
| TAAGATCAGCAACAGCTTCA+AGG | + | chr5_4:48395282-48395301 | None:intergenic | 40.0% | |
| ! | TGTTGTGAGTGATGATGTGA+TGG | - | chr5_4:48395384-48395403 | Msa0855230:CDS | 40.0% |
| TATGTGACTGTTAAGAGAGG+TGG | - | chr5_4:48395424-48395443 | Msa0855230:CDS | 40.0% | |
| AATAGCTTCACTGTGAGTAG+TGG | - | chr5_4:48395481-48395500 | Msa0855230:CDS | 40.0% | |
| TGAGTAGTGGTCAACAACAA+TGG | - | chr5_4:48395494-48395513 | Msa0855230:CDS | 40.0% | |
| !! | GTGATTTGGTGGAAGAAAGG+GGG | + | chr5_4:48393185-48393204 | None:intergenic | 45.0% |
| ! | CTGCTACTTCTTCTTCAGCT+AGG | - | chr5_4:48393616-48393635 | Msa0855230:CDS | 45.0% |
| TCATGGGAGTGATAACAGTG+AGG | - | chr5_4:48393725-48393744 | Msa0855230:CDS | 45.0% | |
| !! | GTTCTGGTTCAGGTTGTACT+AGG | - | chr5_4:48393949-48393968 | Msa0855230:intron | 45.0% |
| TTGTACTAGGCCAGGGAAAA+TGG | - | chr5_4:48393962-48393981 | Msa0855230:intron | 45.0% | |
| ! | AGTAACAATGGTGGAGGAGA+AGG | - | chr5_4:48394026-48394045 | Msa0855230:intron | 45.0% |
| !! | TGGAGGAGAAGGTGTTAAGA+GGG | - | chr5_4:48394037-48394056 | Msa0855230:intron | 45.0% |
| GTTCAATGTCACCTGCTAGA+GGG | - | chr5_4:48394090-48394109 | Msa0855230:intron | 45.0% | |
| ATGTCACCTGCAAGAGGAAA+TGG | - | chr5_4:48394149-48394168 | Msa0855230:intron | 45.0% | |
| TGTCACCTGCAAGAGGAAAT+GGG | - | chr5_4:48394150-48394169 | Msa0855230:intron | 45.0% | |
| ACATTCCCATTTCCTCTTGC+AGG | + | chr5_4:48394158-48394177 | None:intergenic | 45.0% | |
| ATCAGCAACCTTCTCTTAGC+AGG | - | chr5_4:48394189-48394208 | Msa0855230:intron | 45.0% | |
| ! | ATCATCCGGTTCTAGCAGAA+GGG | + | chr5_4:48394742-48394761 | None:intergenic | 45.0% |
| ! | AATCATCCGGTTCTAGCAGA+AGG | + | chr5_4:48394743-48394762 | None:intergenic | 45.0% |
| TGAGGGACAACACAAGAAAC+AGG | - | chr5_4:48394951-48394970 | Msa0855230:CDS | 45.0% | |
| GACAAACAGCAGAGTTGCTA+TGG | - | chr5_4:48394973-48394992 | Msa0855230:CDS | 45.0% | |
| CAGCAGAGTTGCTATGGAAA+AGG | - | chr5_4:48394979-48394998 | Msa0855230:CDS | 45.0% | |
| ! | AAGAATGTGGTGATGCCATC+AGG | - | chr5_4:48395070-48395089 | Msa0855230:CDS | 45.0% |
| ! | AGAATGTGGTGATGCCATCA+GGG | - | chr5_4:48395071-48395090 | Msa0855230:CDS | 45.0% |
| CTGCTTCTTGTAATCCCTGA+TGG | + | chr5_4:48395088-48395107 | None:intergenic | 45.0% | |
| !! | TGGTGGATTGGTTAGAGGTT+CGG | + | chr5_4:48395149-48395168 | None:intergenic | 45.0% |
| !! | GTTTGTGGTGGATTGGTTAG+AGG | + | chr5_4:48395154-48395173 | None:intergenic | 45.0% |
| !! | GTATGTGGTTTGTGGTGGAT+TGG | + | chr5_4:48395161-48395180 | None:intergenic | 45.0% |
| ! | GAAGTGTATGTGGTTTGTGG+TGG | + | chr5_4:48395166-48395185 | None:intergenic | 45.0% |
| CAAGCTGGAAGAGAAACAGA+AGG | + | chr5_4:48395238-48395257 | None:intergenic | 45.0% | |
| !! | CAAGCTTTGTTGAGACAAGC+TGG | + | chr5_4:48395253-48395272 | None:intergenic | 45.0% |
| ATCAGCAACAGCTTCAAGGA+TGG | + | chr5_4:48395278-48395297 | None:intergenic | 45.0% | |
| TGGTTCACTTTGTGAGGATC+AGG | - | chr5_4:48395444-48395463 | Msa0855230:CDS | 45.0% | |
| CTGGTGATTCATCGGATTGT+TGG | - | chr5_4:48395530-48395549 | Msa0855230:CDS | 45.0% | |
| GAGTGTGATCATCAGCATAG+TGG | - | chr5_4:48395595-48395614 | Msa0855230:CDS | 45.0% | |
| TGTGATCATCAGCATAGTGG+TGG | - | chr5_4:48395598-48395617 | Msa0855230:CDS | 45.0% | |
| CATCAGCATAGTGGTGGTAT+TGG | - | chr5_4:48395604-48395623 | Msa0855230:CDS | 45.0% | |
| ! | GGGTGTGGAAAGTGATTTGG+TGG | + | chr5_4:48393196-48393215 | None:intergenic | 50.0% |
| ! | TGGGGGTGTGGAAAGTGATT+TGG | + | chr5_4:48393199-48393218 | None:intergenic | 50.0% |
| TTTGGTGAATTCCGGTGACG+CGG | + | chr5_4:48393783-48393802 | None:intergenic | 50.0% | |
| !! | GTTCAGGTTGTACTAGGCCA+GGG | - | chr5_4:48393955-48393974 | Msa0855230:intron | 50.0% |
| ! | GGAACAGTCACCATTTTCCC+TGG | + | chr5_4:48393975-48393994 | None:intergenic | 50.0% |
| !! | GTGGAGGAGAAGGTGTTAAG+AGG | - | chr5_4:48394036-48394055 | Msa0855230:intron | 50.0% |
| CTAGCAGGTGACATTGAACG+TGG | + | chr5_4:48394089-48394108 | None:intergenic | 50.0% | |
| CGTTCAATGTCACCTGCTAG+AGG | - | chr5_4:48394089-48394108 | Msa0855230:intron | 50.0% | |
| ATGTCACCTGCTAGAGGGAA+TGG | - | chr5_4:48394095-48394114 | Msa0855230:intron | 50.0% | |
| TGTCACCTGCTAGAGGGAAT+GGG | - | chr5_4:48394096-48394115 | Msa0855230:intron | 50.0% | |
| CGTTCAATGTCACCTGCAAG+AGG | - | chr5_4:48394143-48394162 | Msa0855230:intron | 50.0% | |
| ! | TCATCCGGTTCTAGCAGAAG+GGG | + | chr5_4:48394741-48394760 | None:intergenic | 50.0% |
| ! | CCTGTTGTTGTTCCTTCGTG+TGG | + | chr5_4:48395015-48395034 | None:intergenic | 50.0% |
| CCACACGAAGGAACAACAAC+AGG | - | chr5_4:48395012-48395031 | Msa0855230:CDS | 50.0% | |
| GGTTAGAGGTTCGGGATTGA+CGG | + | chr5_4:48395140-48395159 | None:intergenic | 50.0% | |
| !! | GGTGGATTGGTTAGAGGTTC+GGG | + | chr5_4:48395148-48395167 | None:intergenic | 50.0% |
| GAGAGGTGGTTCACTTTGTG+AGG | - | chr5_4:48395438-48395457 | Msa0855230:CDS | 50.0% | |
| TGTGAGGATCAGGAGAGTTC+AGG | - | chr5_4:48395454-48395473 | Msa0855230:CDS | 50.0% | |
| ! | CATAGTGGTGGTATTGGACG+TGG | - | chr5_4:48395610-48395629 | Msa0855230:CDS | 50.0% |
| ATAACCATCGTCCGCGTCAC+CGG | - | chr5_4:48393769-48393788 | Msa0855230:CDS | 55.0% | |
| CGGAGAGTGAGTAGATCTCC+TGG | - | chr5_4:48393879-48393898 | Msa0855230:CDS | 55.0% | |
| !! | GGTTCAGGTTGTACTAGGCC+AGG | - | chr5_4:48393954-48393973 | Msa0855230:intron | 55.0% |
| CCATTCCCATTCCCTCTAGC+AGG | + | chr5_4:48394104-48394123 | None:intergenic | 55.0% | |
| CCTGCTAGAGGGAATGGGAA+TGG | - | chr5_4:48394101-48394120 | Msa0855230:intron | 55.0% | |
| GCTCTCGAGATAGCTCGTCT+AGG | + | chr5_4:48394718-48394737 | None:intergenic | 55.0% | |
| ! | CATCCGGTTCTAGCAGAAGG+GGG | + | chr5_4:48394740-48394759 | None:intergenic | 55.0% |
| GGGTGTGAATTGCCACACGA+AGG | - | chr5_4:48395000-48395019 | Msa0855230:CDS | 55.0% | |
| ! | GGAAGAAAGGGGGTGTGAGG+AGG | + | chr5_4:48393175-48393194 | None:intergenic | 60.0% |
| ! | GGTGGAAGAAAGGGGGTGTG+AGG | + | chr5_4:48393178-48393197 | None:intergenic | 60.0% |
| AATTCCGGTGACGCGGACGA+TGG | + | chr5_4:48393776-48393795 | None:intergenic | 60.0% | |
| GAGCCCCCTTCTGCTAGAAC+CGG | - | chr5_4:48394734-48394753 | Msa0855230:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 48392929 | 48395905 | 48392929 | ID=Msa0855230;Name=Msa0855230 |
| chr5_4 | mRNA | 48392929 | 48395905 | 48392929 | ID=Msa0855230-mRNA-1;Parent=Msa0855230;Name=Msa0855230-mRNA-1;_AED=0.01;_eAED=0.01;_QI=200|1|1|1|1|1|2|248|654 |
| chr5_4 | exon | 48392929 | 48393899 | 48392929 | ID=Msa0855230-mRNA-1:exon:15269;Parent=Msa0855230-mRNA-1 |
| chr5_4 | exon | 48394464 | 48395905 | 48394464 | ID=Msa0855230-mRNA-1:exon:15268;Parent=Msa0855230-mRNA-1 |
| chr5_4 | five_prime_UTR | 48395706 | 48395905 | 48395706 | ID=Msa0855230-mRNA-1:five_prime_utr;Parent=Msa0855230-mRNA-1 |
| chr5_4 | CDS | 48394464 | 48395705 | 48394464 | ID=Msa0855230-mRNA-1:cds;Parent=Msa0855230-mRNA-1 |
| chr5_4 | CDS | 48393177 | 48393899 | 48393177 | ID=Msa0855230-mRNA-1:cds;Parent=Msa0855230-mRNA-1 |
| chr5_4 | three_prime_UTR | 48392929 | 48393176 | 48392929 | ID=Msa0855230-mRNA-1:three_prime_utr;Parent=Msa0855230-mRNA-1 |
| Gene Sequence |
| Protein sequence |
