Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1372230 | XP_013470093.1 | 96.021 | 377 | 12 | 1 | 1 | 377 | 1 | 374 | 0.0 | 747 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1372230 | sp|A2RVM8|HIP37_ARATH | 43.056 | 360 | 137 | 11 | 1 | 339 | 1 | 313 | 1.34e-51 | 179 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1372230 | A0A072VR18 | 96.021 | 377 | 12 | 1 | 1 | 377 | 1 | 374 | 0.0 | 747 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000050 | Msa1372230 | 0.812620 | 3.868562e-51 | -8.615850e-47 |
| Msa0000190 | Msa1372230 | 0.806670 | 7.348935e-50 | -8.615850e-47 |
| Msa0000510 | Msa1372230 | 0.809182 | 2.146689e-50 | -8.615850e-47 |
| Msa0005890 | Msa1372230 | 0.844275 | 8.362146e-59 | -8.615850e-47 |
| Msa0008110 | Msa1372230 | 0.800078 | 1.705904e-48 | -8.615850e-47 |
| Msa0014990 | Msa1372230 | 0.802889 | 4.527899e-49 | -8.615850e-47 |
| Msa0017510 | Msa1372230 | 0.804327 | 2.278506e-49 | -8.615850e-47 |
| Msa0018160 | Msa1372230 | 0.842471 | 2.533667e-58 | -8.615850e-47 |
| Msa0021500 | Msa1372230 | 0.860695 | 1.726764e-63 | -8.615850e-47 |
| Msa0027280 | Msa1372230 | 0.814030 | 1.896015e-51 | -8.615850e-47 |
| Msa0027310 | Msa1372230 | 0.802244 | 6.150889e-49 | -8.615850e-47 |
| Msa0028420 | Msa1372230 | 0.864993 | 8.149563e-65 | -8.615850e-47 |
| Msa0032430 | Msa1372230 | 0.822356 | 2.475533e-53 | -8.615850e-47 |
| Msa0032960 | Msa1372230 | -0.803727 | 3.035889e-49 | -8.615850e-47 |
| Msa0034270 | Msa1372230 | 0.804804 | 1.811552e-49 | -8.615850e-47 |
| Msa0036870 | Msa1372230 | 0.852077 | 5.848919e-61 | -8.615850e-47 |
| Msa0042610 | Msa1372230 | 0.871847 | 5.002125e-67 | -8.615850e-47 |
| Msa0046160 | Msa1372230 | 0.801685 | 8.011888e-49 | -8.615850e-47 |
| Msa0047030 | Msa1372230 | 0.826943 | 2.055904e-54 | -8.615850e-47 |
| Msa0052260 | Msa1372230 | 0.848826 | 4.783505e-60 | -8.615850e-47 |
| Msa0061290 | Msa1372230 | 0.820116 | 8.128039e-53 | -8.615850e-47 |
| Msa0063890 | Msa1372230 | 0.807525 | 4.845329e-50 | -8.615850e-47 |
| Msa0074240 | Msa1372230 | 0.802847 | 4.618687e-49 | -8.615850e-47 |
| Msa0079380 | Msa1372230 | 0.814230 | 1.712218e-51 | -8.615850e-47 |
| Msa0081090 | Msa1372230 | 0.830659 | 2.592390e-55 | -8.615850e-47 |
| Msa0081390 | Msa1372230 | 0.815079 | 1.110863e-51 | -8.615850e-47 |
| Msa0081450 | Msa1372230 | 0.817667 | 2.928494e-52 | -8.615850e-47 |
| Msa0081520 | Msa1372230 | 0.808305 | 3.305584e-50 | -8.615850e-47 |
| Msa0089630 | Msa1372230 | 0.840405 | 8.868888e-58 | -8.615850e-47 |
| Msa0090400 | Msa1372230 | 0.854677 | 1.049654e-61 | -8.615850e-47 |
| Msa0092790 | Msa1372230 | 0.823199 | 1.575183e-53 | -8.615850e-47 |
| Msa0094140 | Msa1372230 | 0.810485 | 1.126230e-50 | -8.615850e-47 |
| Msa0097260 | Msa1372230 | 0.830699 | 2.534833e-55 | -8.615850e-47 |
| Msa0101440 | Msa1372230 | 0.808716 | 2.700918e-50 | -8.615850e-47 |
| Msa0115080 | Msa1372230 | 0.821878 | 3.195259e-53 | -8.615850e-47 |
| Msa0117480 | Msa1372230 | 0.819541 | 1.100161e-52 | -8.615850e-47 |
| Msa1347310 | Msa1372230 | 0.828271 | 9.862530e-55 | -8.615850e-47 |
| Msa1361400 | Msa1372230 | 0.807262 | 5.508981e-50 | -8.615850e-47 |
| Msa1363740 | Msa1372230 | 0.810018 | 1.420267e-50 | -8.615850e-47 |
| Msa1369150 | Msa1372230 | 0.800732 | 1.255202e-48 | -8.615850e-47 |
| Msa1372230 | Msa1390440 | 0.820157 | 7.954384e-53 | -8.615850e-47 |
| Msa1372230 | Msa1391770 | 0.805275 | 1.444307e-49 | -8.615850e-47 |
| Msa1372230 | Msa1392240 | 0.801055 | 1.078481e-48 | -8.615850e-47 |
| Msa1372230 | Msa1392580 | 0.802421 | 5.655820e-49 | -8.615850e-47 |
| Msa1372230 | Msa1396030 | 0.824655 | 7.174019e-54 | -8.615850e-47 |
| Msa1372230 | Msa1397400 | 0.810320 | 1.222083e-50 | -8.615850e-47 |
| Msa1372230 | Msa1398340 | 0.810368 | 1.193420e-50 | -8.615850e-47 |
| Msa1372230 | Msa1413690 | 0.812120 | 4.974812e-51 | -8.615850e-47 |
| Msa1372230 | Msa1414640 | 0.809012 | 2.335414e-50 | -8.615850e-47 |
| Msa1372230 | Msa1419370 | 0.802367 | 5.802637e-49 | -8.615850e-47 |
| Msa1372230 | Msa1422420 | 0.800925 | 1.146326e-48 | -8.615850e-47 |
| Msa1372230 | Msa1440560 | 0.800699 | 1.275091e-48 | -8.615850e-47 |
| Msa1372230 | Msa1440880 | 0.817787 | 2.750815e-52 | -8.615850e-47 |
| Msa1372230 | Msa1440960 | 0.823200 | 1.574643e-53 | -8.615850e-47 |
| Msa1372230 | Msa1446810 | 0.822260 | 2.605242e-53 | -8.615850e-47 |
| Msa1372230 | Msa1446820 | 0.820736 | 5.858071e-53 | -8.615850e-47 |
| Msa1372230 | Msa1451160 | 0.832890 | 7.300029e-56 | -8.615850e-47 |
| Msa1372230 | Msa1454140 | 0.858508 | 7.849116e-63 | -8.615850e-47 |
| Msa1372230 | Msa1464810 | 0.832681 | 8.227659e-56 | -8.615850e-47 |
| Msa1372230 | Msa1465440 | 0.864882 | 8.827038e-65 | -8.615850e-47 |
| Msa1372230 | Msa1466920 | 0.805953 | 1.040876e-49 | -8.615850e-47 |
| Msa0602880 | Msa1372230 | 0.815508 | 8.919181e-52 | -8.615850e-47 |
| Msa0615710 | Msa1372230 | 0.816684 | 4.871480e-52 | -8.615850e-47 |
| Msa0625720 | Msa1372230 | 0.808423 | 3.119450e-50 | -8.615850e-47 |
| Msa0626450 | Msa1372230 | 0.838218 | 3.275904e-57 | -8.615850e-47 |
| Msa0626490 | Msa1372230 | 0.837927 | 3.894042e-57 | -8.615850e-47 |
| Msa0627450 | Msa1372230 | 0.806293 | 8.824969e-50 | -8.615850e-47 |
| Msa0637560 | Msa1372230 | 0.818398 | 2.001810e-52 | -8.615850e-47 |
| Msa0637580 | Msa1372230 | 0.817156 | 3.816958e-52 | -8.615850e-47 |
| Msa0643300 | Msa1372230 | 0.814818 | 1.268984e-51 | -8.615850e-47 |
| Msa0643940 | Msa1372230 | 0.804615 | 1.984345e-49 | -8.615850e-47 |
| Msa0651550 | Msa1372230 | 0.803634 | 3.174425e-49 | -8.615850e-47 |
| Msa0658640 | Msa1372230 | 0.804229 | 2.388194e-49 | -8.615850e-47 |
| Msa0663390 | Msa1372230 | 0.808353 | 3.229680e-50 | -8.615850e-47 |
| Msa0664600 | Msa1372230 | 0.836925 | 7.032279e-57 | -8.615850e-47 |
| Msa0677410 | Msa1372230 | 0.828049 | 1.115712e-54 | -8.615850e-47 |
| Msa0683470 | Msa1372230 | 0.818971 | 1.483633e-52 | -8.615850e-47 |
| Msa0683570 | Msa1372230 | 0.836279 | 1.027236e-56 | -8.615850e-47 |
| Msa0689520 | Msa1372230 | 0.810439 | 1.152208e-50 | -8.615850e-47 |
| Msa0697160 | Msa1372230 | 0.828568 | 8.362537e-55 | -8.615850e-47 |
| Msa0704410 | Msa1372230 | 0.802343 | 5.868759e-49 | -8.615850e-47 |
| Msa0713770 | Msa1372230 | 0.806499 | 7.987313e-50 | -8.615850e-47 |
| Msa0727640 | Msa1372230 | 0.806533 | 7.854552e-50 | -8.615850e-47 |
| Msa0730430 | Msa1372230 | 0.841523 | 4.513570e-58 | -8.615850e-47 |
| Msa0736960 | Msa1372230 | 0.806676 | 7.326708e-50 | -8.615850e-47 |
| Msa0741220 | Msa1372230 | 0.823345 | 1.456284e-53 | -8.615850e-47 |
| Msa0741240 | Msa1372230 | 0.811915 | 5.512492e-51 | -8.615850e-47 |
| Msa0741650 | Msa1372230 | 0.807610 | 4.647122e-50 | -8.615850e-47 |
| Msa0741840 | Msa1372230 | 0.846149 | 2.603573e-59 | -8.615850e-47 |
| Msa0765840 | Msa1372230 | 0.805714 | 1.168114e-49 | -8.615850e-47 |
| Msa0765910 | Msa1372230 | 0.806341 | 8.623895e-50 | -8.615850e-47 |
| Msa0768990 | Msa1372230 | 0.806992 | 6.283252e-50 | -8.615850e-47 |
| Msa0770720 | Msa1372230 | 0.837325 | 5.555613e-57 | -8.615850e-47 |
| Msa0795870 | Msa1372230 | 0.847212 | 1.333578e-59 | -8.615850e-47 |
| Msa0806790 | Msa1372230 | 0.801019 | 1.096920e-48 | -8.615850e-47 |
| Msa0828560 | Msa1372230 | 0.806423 | 8.285796e-50 | -8.615850e-47 |
| Msa0829300 | Msa1372230 | 0.801399 | 9.172684e-49 | -8.615850e-47 |
| Msa0833650 | Msa1372230 | 0.855369 | 6.605633e-62 | -8.615850e-47 |
| Msa0835490 | Msa1372230 | 0.833823 | 4.274698e-56 | -8.615850e-47 |
| Msa0122040 | Msa1372230 | 0.808495 | 3.011515e-50 | -8.615850e-47 |
| Msa0124060 | Msa1372230 | 0.852896 | 3.417463e-61 | -8.615850e-47 |
| Msa0124280 | Msa1372230 | 0.805174 | 1.516182e-49 | -8.615850e-47 |
| Msa0125550 | Msa1372230 | 0.835690 | 1.449237e-56 | -8.615850e-47 |
| Msa0131900 | Msa1372230 | 0.807804 | 4.226114e-50 | -8.615850e-47 |
| Msa0136650 | Msa1372230 | 0.806973 | 6.341640e-50 | -8.615850e-47 |
| Msa0137880 | Msa1372230 | 0.830408 | 2.987218e-55 | -8.615850e-47 |
| Msa0146040 | Msa1372230 | 0.845128 | 4.926862e-59 | -8.615850e-47 |
| Msa0152350 | Msa1372230 | 0.810426 | 1.159705e-50 | -8.615850e-47 |
| Msa0157290 | Msa1372230 | 0.804951 | 1.687704e-49 | -8.615850e-47 |
| Msa0168500 | Msa1372230 | 0.857804 | 1.271988e-62 | -8.615850e-47 |
| Msa0172070 | Msa1372230 | 0.812626 | 3.857527e-51 | -8.615850e-47 |
| Msa0173690 | Msa1372230 | 0.815278 | 1.003549e-51 | -8.615850e-47 |
| Msa0174450 | Msa1372230 | 0.816230 | 6.154507e-52 | -8.615850e-47 |
| Msa0175780 | Msa1372230 | 0.805340 | 1.399431e-49 | -8.615850e-47 |
| Msa0178560 | Msa1372230 | 0.976197 | 2.287744e-141 | -8.615850e-47 |
| Msa0190570 | Msa1372230 | 0.808113 | 3.633300e-50 | -8.615850e-47 |
| Msa0198050 | Msa1372230 | 0.804757 | 1.853619e-49 | -8.615850e-47 |
| Msa0211030 | Msa1372230 | 0.823933 | 1.060459e-53 | -8.615850e-47 |
| Msa0211150 | Msa1372230 | 0.822029 | 2.946524e-53 | -8.615850e-47 |
| Msa0221000 | Msa1372230 | 0.801327 | 9.489488e-49 | -8.615850e-47 |
| Msa0223080 | Msa1372230 | 0.831813 | 1.349354e-55 | -8.615850e-47 |
| Msa0225100 | Msa1372230 | 0.829266 | 5.666520e-55 | -8.615850e-47 |
| Msa0225760 | Msa1372230 | 0.807701 | 4.444039e-50 | -8.615850e-47 |
| Msa0225860 | Msa1372230 | 0.836873 | 7.251564e-57 | -8.615850e-47 |
| Msa0229230 | Msa1372230 | 0.811323 | 7.415523e-51 | -8.615850e-47 |
| Msa0230740 | Msa1372230 | 0.838720 | 2.431756e-57 | -8.615850e-47 |
| Msa0230750 | Msa1372230 | 0.830335 | 3.112542e-55 | -8.615850e-47 |
| Msa0231650 | Msa1372230 | 0.801937 | 7.112122e-49 | -8.615850e-47 |
| Msa1225690 | Msa1372230 | 0.834811 | 2.415346e-56 | -8.615850e-47 |
| Msa1226520 | Msa1372230 | 0.809826 | 1.561577e-50 | -8.615850e-47 |
| Msa1228200 | Msa1372230 | 0.833772 | 4.401585e-56 | -8.615850e-47 |
| Msa1229500 | Msa1372230 | 0.814772 | 1.299146e-51 | -8.615850e-47 |
| Msa1236410 | Msa1372230 | 0.824592 | 7.423799e-54 | -8.615850e-47 |
| Msa1242670 | Msa1372230 | 0.829106 | 6.195469e-55 | -8.615850e-47 |
| Msa1243490 | Msa1372230 | 0.815784 | 7.742164e-52 | -8.615850e-47 |
| Msa1269480 | Msa1372230 | 0.824271 | 8.835512e-54 | -8.615850e-47 |
| Msa1271990 | Msa1372230 | 0.810702 | 1.010802e-50 | -8.615850e-47 |
| Msa1282260 | Msa1372230 | 0.806692 | 7.270689e-50 | -8.615850e-47 |
| Msa1284550 | Msa1372230 | 0.810193 | 1.301622e-50 | -8.615850e-47 |
| Msa1297230 | Msa1372230 | 0.847385 | 1.195681e-59 | -8.615850e-47 |
| Msa1298220 | Msa1372230 | 0.805406 | 1.355704e-49 | -8.615850e-47 |
| Msa1298820 | Msa1372230 | 0.807115 | 5.917763e-50 | -8.615850e-47 |
| Msa1302830 | Msa1372230 | 0.813584 | 2.377675e-51 | -8.615850e-47 |
| Msa1314650 | Msa1372230 | 0.831867 | 1.308696e-55 | -8.615850e-47 |
| Msa1321340 | Msa1372230 | 0.821552 | 3.800718e-53 | -8.615850e-47 |
| Msa1322940 | Msa1372230 | 0.811772 | 5.922635e-51 | -8.615850e-47 |
| Msa1328710 | Msa1372230 | 0.805812 | 1.114325e-49 | -8.615850e-47 |
| Msa1330410 | Msa1372230 | 0.828854 | 7.133146e-55 | -8.615850e-47 |
| Msa1333080 | Msa1372230 | 0.811843 | 5.716802e-51 | -8.615850e-47 |
| Msa1343180 | Msa1372230 | 0.826322 | 2.890980e-54 | -8.615850e-47 |
| Msa1343430 | Msa1372230 | 0.839762 | 1.305014e-57 | -8.615850e-47 |
| Msa0371030 | Msa1372230 | 0.817426 | 3.317728e-52 | -8.615850e-47 |
| Msa0376350 | Msa1372230 | 0.817067 | 3.995719e-52 | -8.615850e-47 |
| Msa0378720 | Msa1372230 | 0.832968 | 6.982022e-56 | -8.615850e-47 |
| Msa0380620 | Msa1372230 | 0.803751 | 3.001878e-49 | -8.615850e-47 |
| Msa0382070 | Msa1372230 | 0.801676 | 8.048133e-49 | -8.615850e-47 |
| Msa0386090 | Msa1372230 | 0.828885 | 7.009966e-55 | -8.615850e-47 |
| Msa0403950 | Msa1372230 | 0.808176 | 3.522946e-50 | -8.615850e-47 |
| Msa0403970 | Msa1372230 | 0.803046 | 4.201560e-49 | -8.615850e-47 |
| Msa0419410 | Msa1372230 | 0.804976 | 1.668013e-49 | -8.615850e-47 |
| Msa0419700 | Msa1372230 | 0.810673 | 1.025383e-50 | -8.615850e-47 |
| Msa0424790 | Msa1372230 | 0.817783 | 2.756501e-52 | -8.615850e-47 |
| Msa0428150 | Msa1372230 | 0.800042 | 1.735143e-48 | -8.615850e-47 |
| Msa0430260 | Msa1372230 | 0.801596 | 8.356541e-49 | -8.615850e-47 |
| Msa0430300 | Msa1372230 | 0.805780 | 1.131426e-49 | -8.615850e-47 |
| Msa0462500 | Msa1372230 | 0.803901 | 2.794482e-49 | -8.615850e-47 |
| Msa0464380 | Msa1372230 | 0.808328 | 3.268294e-50 | -8.615850e-47 |
| Msa0464680 | Msa1372230 | 0.826878 | 2.130000e-54 | -8.615850e-47 |
| Msa0465410 | Msa1372230 | 0.813242 | 2.826111e-51 | -8.615850e-47 |
| Msa0467490 | Msa1372230 | 0.859063 | 5.358657e-63 | -8.615850e-47 |
| Msa0474520 | Msa1372230 | 0.816906 | 4.343003e-52 | -8.615850e-47 |
| Msa0474730 | Msa1372230 | 0.824263 | 8.873851e-54 | -8.615850e-47 |
| Msa0476650 | Msa1372230 | 0.812100 | 5.023465e-51 | -8.615850e-47 |
| Msa0479170 | Msa1372230 | 0.802357 | 5.828990e-49 | -8.615850e-47 |
| Msa0481530 | Msa1372230 | 0.802024 | 6.827666e-49 | -8.615850e-47 |
| Msa0979730 | Msa1372230 | 0.818195 | 2.225198e-52 | -8.615850e-47 |
| Msa1004840 | Msa1372230 | 0.808039 | 3.767620e-50 | -8.615850e-47 |
| Msa1019000 | Msa1372230 | 0.812237 | 4.690380e-51 | -8.615850e-47 |
| Msa1019430 | Msa1372230 | 0.809095 | 2.241539e-50 | -8.615850e-47 |
| Msa1019470 | Msa1372230 | 0.804843 | 1.778515e-49 | -8.615850e-47 |
| Msa1020510 | Msa1372230 | 0.808147 | 3.572941e-50 | -8.615850e-47 |
| Msa1020670 | Msa1372230 | 0.819845 | 9.377843e-53 | -8.615850e-47 |
| Msa1043370 | Msa1372230 | 0.806395 | 8.398486e-50 | -8.615850e-47 |
| Msa1045140 | Msa1372230 | 0.854804 | 9.644562e-62 | -8.615850e-47 |
| Msa1075650 | Msa1372230 | 0.803345 | 3.643647e-49 | -8.615850e-47 |
| Msa1078170 | Msa1372230 | 0.825746 | 3.963015e-54 | -8.615850e-47 |
| Msa1081330 | Msa1372230 | 0.807654 | 4.548530e-50 | -8.615850e-47 |
| Msa1084960 | Msa1372230 | 0.836554 | 8.742408e-57 | -8.615850e-47 |
| Msa1090140 | Msa1372230 | 0.807857 | 4.119052e-50 | -8.615850e-47 |
| Msa1101090 | Msa1372230 | 0.813327 | 2.707600e-51 | -8.615850e-47 |
| Msa1103990 | Msa1372230 | 0.839014 | 2.041002e-57 | -8.615850e-47 |
| Msa0239190 | Msa1372230 | 0.816102 | 6.573370e-52 | -8.615850e-47 |
| Msa0242590 | Msa1372230 | 0.814251 | 1.694863e-51 | -8.615850e-47 |
| Msa0244640 | Msa1372230 | 0.810425 | 1.160024e-50 | -8.615850e-47 |
| Msa0255090 | Msa1372230 | 0.824879 | 6.355489e-54 | -8.615850e-47 |
| Msa0259380 | Msa1372230 | 0.821063 | 4.927503e-53 | -8.615850e-47 |
| Msa0260610 | Msa1372230 | 0.810500 | 1.117843e-50 | -8.615850e-47 |
| Msa0260670 | Msa1372230 | 0.813752 | 2.182991e-51 | -8.615850e-47 |
| Msa0261340 | Msa1372230 | 0.801644 | 8.169120e-49 | -8.615850e-47 |
| Msa0266180 | Msa1372230 | 0.805202 | 1.495962e-49 | -8.615850e-47 |
| Msa0267110 | Msa1372230 | 0.837245 | 5.823740e-57 | -8.615850e-47 |
| Msa0287740 | Msa1372230 | 0.833080 | 6.547738e-56 | -8.615850e-47 |
| Msa0292330 | Msa1372230 | 0.831894 | 1.288254e-55 | -8.615850e-47 |
| Msa0292400 | Msa1372230 | 0.834153 | 3.532647e-56 | -8.615850e-47 |
| Msa0298470 | Msa1372230 | 0.828741 | 7.594931e-55 | -8.615850e-47 |
| Msa0300270 | Msa1372230 | 0.811175 | 7.985890e-51 | -8.615850e-47 |
| Msa0300320 | Msa1372230 | 0.809211 | 2.117150e-50 | -8.615850e-47 |
| Msa0302160 | Msa1372230 | 0.824265 | 8.866020e-54 | -8.615850e-47 |
| Msa0302170 | Msa1372230 | 0.807161 | 5.786582e-50 | -8.615850e-47 |
| Msa0321620 | Msa1372230 | 0.804416 | 2.183360e-49 | -8.615850e-47 |
| Msa0337700 | Msa1372230 | 0.831260 | 1.845823e-55 | -8.615850e-47 |
| Msa0338510 | Msa1372230 | 0.813924 | 2.000515e-51 | -8.615850e-47 |
| Msa0339490 | Msa1372230 | 0.825095 | 5.649461e-54 | -8.615850e-47 |
| Msa0339500 | Msa1372230 | 0.832500 | 9.125704e-56 | -8.615850e-47 |
| Msa0342310 | Msa1372230 | 0.840605 | 7.863338e-58 | -8.615850e-47 |
| Msa0358890 | Msa1372230 | 0.803413 | 3.528526e-49 | -8.615850e-47 |
| Msa0363200 | Msa1372230 | 0.803069 | 4.156010e-49 | -8.615850e-47 |
| Msa1108160 | Msa1372230 | 0.808784 | 2.612634e-50 | -8.615850e-47 |
| Msa1111090 | Msa1372230 | 0.811627 | 6.367917e-51 | -8.615850e-47 |
| Msa1113340 | Msa1372230 | 0.816935 | 4.277715e-52 | -8.615850e-47 |
| Msa1117920 | Msa1372230 | 0.800334 | 1.513210e-48 | -8.615850e-47 |
| Msa1123380 | Msa1372230 | 0.809288 | 2.037933e-50 | -8.615850e-47 |
| Msa1130230 | Msa1372230 | 0.804159 | 2.469942e-49 | -8.615850e-47 |
| Msa1132840 | Msa1372230 | 0.860245 | 2.362795e-63 | -8.615850e-47 |
| Msa1140210 | Msa1372230 | 0.844194 | 8.793248e-59 | -8.615850e-47 |
| Msa1155170 | Msa1372230 | -0.816088 | 6.623354e-52 | -8.615850e-47 |
| Msa1161680 | Msa1372230 | 0.813471 | 2.517683e-51 | -8.615850e-47 |
| Msa1171710 | Msa1372230 | 0.811471 | 6.885173e-51 | -8.615850e-47 |
| Msa1177320 | Msa1372230 | 0.817925 | 2.560802e-52 | -8.615850e-47 |
| Msa1186020 | Msa1372230 | 0.847646 | 1.013549e-59 | -8.615850e-47 |
| Msa1189070 | Msa1372230 | 0.818429 | 1.969104e-52 | -8.615850e-47 |
| Msa1196440 | Msa1372230 | 0.828335 | 9.521298e-55 | -8.615850e-47 |
| Msa1199570 | Msa1372230 | 0.800246 | 1.577178e-48 | -8.615850e-47 |
| Msa1200890 | Msa1372230 | 0.806816 | 6.843693e-50 | -8.615850e-47 |
| Msa1205280 | Msa1372230 | 0.821295 | 4.355645e-53 | -8.615850e-47 |
| Msa1206460 | Msa1372230 | 0.807824 | 4.185354e-50 | -8.615850e-47 |
| Msa1208950 | Msa1372230 | 0.805840 | 1.099030e-49 | -8.615850e-47 |
| Msa1209460 | Msa1372230 | 0.827477 | 1.531504e-54 | -8.615850e-47 |
| Msa0498060 | Msa1372230 | 0.801059 | 1.076591e-48 | -8.615850e-47 |
| Msa0511270 | Msa1372230 | 0.821224 | 4.524563e-53 | -8.615850e-47 |
| Msa0516170 | Msa1372230 | 0.829921 | 3.926996e-55 | -8.615850e-47 |
| Msa0520890 | Msa1372230 | 0.804318 | 2.288517e-49 | -8.615850e-47 |
| Msa0529890 | Msa1372230 | 0.807898 | 4.036641e-50 | -8.615850e-47 |
| Msa0530780 | Msa1372230 | 0.856581 | 2.919891e-62 | -8.615850e-47 |
| Msa0532070 | Msa1372230 | 0.821049 | 4.963576e-53 | -8.615850e-47 |
| Msa0545340 | Msa1372230 | 0.803376 | 3.591005e-49 | -8.615850e-47 |
| Msa0546500 | Msa1372230 | 0.800517 | 1.388513e-48 | -8.615850e-47 |
| Msa0547900 | Msa1372230 | 0.820842 | 5.539132e-53 | -8.615850e-47 |
| Msa0557460 | Msa1372230 | 0.811399 | 7.137528e-51 | -8.615850e-47 |
| Msa0569200 | Msa1372230 | 0.852016 | 6.084556e-61 | -8.615850e-47 |
| Msa0580370 | Msa1372230 | 0.856467 | 3.154321e-62 | -8.615850e-47 |
| Msa0583830 | Msa1372230 | 0.815454 | 9.168743e-52 | -8.615850e-47 |
| Msa0585560 | Msa1372230 | 0.816114 | 6.534976e-52 | -8.615850e-47 |
| Msa0594310 | Msa1372230 | 0.805706 | 1.172807e-49 | -8.615850e-47 |
| Msa0597790 | Msa1372230 | 0.825468 | 4.610767e-54 | -8.615850e-47 |
| Msa0600930 | Msa1372230 | 0.813938 | 1.986224e-51 | -8.615850e-47 |
| Msa0602460 | Msa1372230 | 0.810940 | 8.975965e-51 | -8.615850e-47 |
| Msa0845440 | Msa1372230 | 0.814648 | 1.384599e-51 | -8.615850e-47 |
| Msa0861510 | Msa1372230 | 0.827121 | 1.862894e-54 | -8.615850e-47 |
| Msa0861600 | Msa1372230 | 0.833344 | 5.630014e-56 | -8.615850e-47 |
| Msa0861850 | Msa1372230 | 0.813962 | 1.962910e-51 | -8.615850e-47 |
| Msa0861870 | Msa1372230 | 0.814997 | 1.158521e-51 | -8.615850e-47 |
| Msa0866520 | Msa1372230 | 0.802400 | 5.713276e-49 | -8.615850e-47 |
| Msa0872830 | Msa1372230 | 0.804317 | 2.289003e-49 | -8.615850e-47 |
| Msa0876190 | Msa1372230 | 0.825249 | 5.194909e-54 | -8.615850e-47 |
| Msa0890320 | Msa1372230 | 0.807203 | 5.670181e-50 | -8.615850e-47 |
| Msa0896540 | Msa1372230 | 0.823521 | 1.324462e-53 | -8.615850e-47 |
| Msa0925180 | Msa1372230 | 0.817525 | 3.152427e-52 | -8.615850e-47 |
| Msa0938120 | Msa1372230 | 0.805687 | 1.183592e-49 | -8.615850e-47 |
| Msa0938220 | Msa1372230 | 0.800475 | 1.416420e-48 | -8.615850e-47 |
| Msa0945110 | Msa1372230 | 0.845551 | 3.783583e-59 | -8.615850e-47 |
| Msa0960600 | Msa1372230 | 0.806632 | 7.487240e-50 | -8.615850e-47 |
| Msa0967380 | Msa1372230 | 0.805794 | 1.123895e-49 | -8.615850e-47 |
| Msa0967870 | Msa1372230 | 0.824304 | 8.679784e-54 | -8.615850e-47 |
| Msa0968850 | Msa1372230 | 0.805160 | 1.526492e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1372230 | MtrunA17_Chr1g0208301 | 96.021 | 377 | 12 | 1 | 1 | 377 | 1 | 374 | 0.0 | 747 |
| Msa1372230 | MtrunA17_Chr2g0287751 | 71.429 | 77 | 19 | 1 | 1 | 77 | 1 | 74 | 4.80e-29 | 117 |
| Msa1372230 | MtrunA17_Chr0c22g0493881 | 69.231 | 78 | 21 | 1 | 1 | 78 | 1 | 75 | 3.00e-28 | 113 |
| Msa1372230 | MtrunA17_Chr4g0065651 | 69.231 | 78 | 21 | 1 | 1 | 78 | 1 | 75 | 4.67e-28 | 115 |
| Msa1372230 | MtrunA17_Chr4g0032861 | 83.051 | 59 | 10 | 0 | 269 | 327 | 2 | 60 | 1.54e-27 | 105 |
| Msa1372230 | MtrunA17_Chr4g0065621 | 69.231 | 78 | 21 | 1 | 1 | 78 | 1 | 75 | 4.10e-27 | 110 |
| Msa1372230 | MtrunA17_Chr7g0269081 | 67.606 | 71 | 23 | 0 | 7 | 77 | 16 | 86 | 1.78e-26 | 107 |
| Msa1372230 | MtrunA17_Chr1g0191671 | 44.848 | 165 | 60 | 6 | 1 | 143 | 1 | 156 | 5.86e-26 | 109 |
| Msa1372230 | MtrunA17_Chr3g0111541 | 42.982 | 114 | 59 | 1 | 10 | 123 | 9 | 116 | 4.81e-22 | 93.2 |
| Msa1372230 | MtrunA17_Chr4g0067291 | 50.000 | 92 | 36 | 1 | 10 | 91 | 71 | 162 | 8.11e-21 | 92.4 |
| Msa1372230 | MtrunA17_Chr7g0272571 | 59.091 | 66 | 27 | 0 | 12 | 77 | 32 | 97 | 1.41e-19 | 89.0 |
| Msa1372230 | MtrunA17_Chr2g0296001 | 60.000 | 70 | 28 | 0 | 10 | 79 | 70 | 139 | 6.60e-19 | 87.0 |
| Msa1372230 | MtrunA17_Chr2g0287741 | 63.636 | 66 | 24 | 0 | 16 | 81 | 18 | 83 | 1.63e-18 | 87.0 |
| Msa1372230 | MtrunA17_Chr1g0192131 | 53.425 | 73 | 33 | 1 | 10 | 81 | 12 | 84 | 5.61e-18 | 84.7 |
| Msa1372230 | MtrunA17_Chr3g0124411 | 50.746 | 67 | 33 | 0 | 11 | 77 | 28 | 94 | 2.00e-14 | 70.1 |
| Msa1372230 | MtrunA17_Chr8g0382721 | 51.562 | 64 | 31 | 0 | 14 | 77 | 30 | 93 | 1.78e-13 | 67.8 |
| Msa1372230 | MtrunA17_Chr1g0160201 | 43.939 | 66 | 37 | 0 | 12 | 77 | 24 | 89 | 3.27e-13 | 66.6 |
| Msa1372230 | MtrunA17_Chr3g0094841 | 37.634 | 93 | 55 | 2 | 12 | 103 | 115 | 205 | 1.32e-12 | 67.0 |
| Msa1372230 | MtrunA17_Chr7g0218981 | 39.437 | 71 | 43 | 0 | 13 | 83 | 4 | 74 | 2.27e-12 | 63.5 |
| Msa1372230 | MtrunA17_Chr5g0414621 | 47.619 | 84 | 36 | 2 | 94 | 169 | 629 | 712 | 2.66e-12 | 68.6 |
| Msa1372230 | MtrunA17_Chr5g0407821 | 39.394 | 66 | 40 | 0 | 12 | 77 | 22 | 87 | 3.93e-12 | 63.5 |
| Msa1372230 | MtrunA17_Chr2g0325601 | 39.726 | 73 | 43 | 1 | 17 | 89 | 6 | 77 | 6.93e-12 | 62.8 |
| Msa1372230 | MtrunA17_Chr4g0036931 | 40.845 | 71 | 41 | 1 | 8 | 77 | 23 | 93 | 7.19e-12 | 63.2 |
| Msa1372230 | MtrunA17_Chr1g0189221 | 39.706 | 68 | 41 | 0 | 10 | 77 | 50 | 117 | 8.69e-12 | 63.5 |
| Msa1372230 | MtrunA17_Chr3g0145621 | 39.706 | 68 | 40 | 1 | 11 | 77 | 24 | 91 | 3.25e-11 | 61.2 |
| Msa1372230 | MtrunA17_Chr1g0198341 | 40.000 | 65 | 39 | 0 | 13 | 77 | 4 | 68 | 6.66e-11 | 58.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1372230 | AT1G23000.1 | 43.056 | 360 | 137 | 11 | 1 | 339 | 1 | 313 | 1.36e-52 | 179 |
| Msa1372230 | AT1G23000.2 | 43.056 | 360 | 137 | 11 | 1 | 339 | 61 | 373 | 4.57e-52 | 179 |
| Msa1372230 | AT3G06130.2 | 67.742 | 93 | 26 | 2 | 1 | 92 | 1 | 90 | 5.76e-33 | 126 |
| Msa1372230 | AT3G06130.1 | 67.742 | 93 | 26 | 2 | 1 | 92 | 1 | 90 | 1.48e-32 | 127 |
| Msa1372230 | AT5G19090.2 | 66.667 | 90 | 24 | 2 | 1 | 87 | 1 | 87 | 7.37e-31 | 122 |
| Msa1372230 | AT5G19090.3 | 66.667 | 90 | 24 | 2 | 1 | 87 | 1 | 87 | 7.37e-31 | 122 |
| Msa1372230 | AT5G19090.5 | 66.667 | 90 | 24 | 2 | 1 | 87 | 1 | 87 | 1.72e-30 | 123 |
| Msa1372230 | AT5G19090.4 | 66.667 | 90 | 24 | 2 | 1 | 87 | 1 | 87 | 1.72e-30 | 123 |
| Msa1372230 | AT5G19090.1 | 66.667 | 90 | 24 | 2 | 1 | 87 | 1 | 87 | 1.72e-30 | 123 |
| Msa1372230 | AT5G27690.1 | 51.807 | 83 | 39 | 1 | 5 | 86 | 21 | 103 | 1.53e-23 | 100 |
| Msa1372230 | AT3G05220.1 | 62.319 | 69 | 26 | 0 | 9 | 77 | 6 | 74 | 7.35e-23 | 100 |
| Msa1372230 | AT5G37860.1 | 31.020 | 245 | 142 | 9 | 12 | 254 | 9 | 228 | 1.61e-17 | 82.0 |
| Msa1372230 | AT1G56210.1 | 52.239 | 67 | 32 | 0 | 13 | 79 | 40 | 106 | 6.46e-16 | 79.0 |
| Msa1372230 | AT1G06330.1 | 43.939 | 66 | 37 | 0 | 12 | 77 | 1 | 66 | 1.58e-13 | 68.2 |
| Msa1372230 | AT3G56891.1 | 42.623 | 61 | 35 | 0 | 17 | 77 | 20 | 80 | 2.28e-12 | 65.1 |
| Msa1372230 | AT1G71050.1 | 40.909 | 66 | 39 | 0 | 12 | 77 | 27 | 92 | 1.19e-11 | 62.8 |
| Msa1372230 | AT3G56891.2 | 43.636 | 55 | 31 | 0 | 23 | 77 | 3 | 57 | 1.37e-11 | 62.4 |
| Msa1372230 | AT2G18196.1 | 39.706 | 68 | 41 | 0 | 10 | 77 | 43 | 110 | 1.68e-11 | 63.2 |
| Msa1372230 | AT5G66110.3 | 38.028 | 71 | 43 | 1 | 8 | 77 | 14 | 84 | 7.86e-11 | 60.5 |
| Msa1372230 | AT5G66110.1 | 38.028 | 71 | 43 | 1 | 8 | 77 | 14 | 84 | 7.86e-11 | 60.5 |
Find 95 sgRNAs with CRISPR-Local
Find 310 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACTATACTAACTTAGAAAA+TGG | 0.132364 | tig0019271:+163307 | None:intergenic |
| TTCATAACCATGTTCTGATT+TGG | 0.207548 | tig0019271:+163945 | None:intergenic |
| CAGCAGAAGGTAACAGTTTC+AGG | 0.218037 | tig0019271:-164365 | Msa1372230:CDS |
| TCATAACCATGTTCTGATTT+GGG | 0.272787 | tig0019271:+163946 | None:intergenic |
| ATAGTAGTTTGACTGTAATT+TGG | 0.290054 | tig0019271:-163290 | Msa1372230:three_prime_UTR |
| GCTGGTAGTGCTACTGTTCT+AGG | 0.303996 | tig0019271:-163750 | Msa1372230:CDS |
| TTAACATAGATGGTGGATAT+TGG | 0.307758 | tig0019271:+163652 | None:intergenic |
| CAATACTCAATTGGCTCAAT+TGG | 0.318171 | tig0019271:-163871 | Msa1372230:CDS |
| ACCAATGTCACTCGCCCTTT+TGG | 0.321785 | tig0019271:+163818 | None:intergenic |
| GGTGGAAATTCCAATGGTTT+AGG | 0.330691 | tig0019271:-163729 | Msa1372230:CDS |
| TTCATGTTCATTAACATAGA+TGG | 0.342463 | tig0019271:+163642 | None:intergenic |
| CTTTAGCATCTGAAAATGAT+TGG | 0.354821 | tig0019271:+164055 | None:intergenic |
| ATGAAGAGATGCGGTTCATC+AGG | 0.357851 | tig0019271:-164085 | Msa1372230:CDS |
| TTTGCATAGGAGTAATTTGC+AGG | 0.391852 | tig0019271:+163480 | None:intergenic |
| GTCAAAGATGACAAGAATAA+AGG | 0.400209 | tig0019271:-164227 | Msa1372230:CDS |
| TGGTGGGACAGGTTTGTGTT+AGG | 0.406147 | tig0019271:-163270 | Msa1372230:three_prime_UTR |
| TGATGAGGAAGAGGAGGAGG+AGG | 0.411229 | tig0019271:-164108 | Msa1372230:CDS |
| AAACTCCTTCAGAGAATTGA+AGG | 0.417205 | tig0019271:-164927 | Msa1372230:intron |
| GTTATGAAGGAAGGTGCTAA+TGG | 0.420368 | tig0019271:-163930 | Msa1372230:CDS |
| ACAGGTTTGTGTTAGGATGT+TGG | 0.428194 | tig0019271:-163263 | Msa1372230:three_prime_UTR |
| GAAGTTGAACAATACTCAAT+TGG | 0.428232 | tig0019271:-163880 | Msa1372230:CDS |
| CCAGTAACAAAACCACCATT+TGG | 0.437509 | tig0019271:+163675 | None:intergenic |
| AAAGTAATGCAGTGAGAGAA+GGG | 0.441347 | tig0019271:+165556 | None:intergenic |
| ATATGATGAGGAAGAGGAGG+AGG | 0.443899 | tig0019271:-164111 | Msa1372230:CDS |
| ATCAAGAAACTAGTAAGATC+TGG | 0.446205 | tig0019271:-164320 | Msa1372230:CDS |
| ATAATATTCATCATCCTCTT+CGG | 0.450964 | tig0019271:+164136 | None:intergenic |
| TTGTAATAATAGCCAGTGTT+AGG | 0.451520 | tig0019271:+163519 | None:intergenic |
| TGACTGTAATTTGGTGGGAC+AGG | 0.451908 | tig0019271:-163281 | Msa1372230:three_prime_UTR |
| ACTATACTAACTTAGAAAAT+GGG | 0.452023 | tig0019271:+163308 | None:intergenic |
| CTTTAAGCTCCTTAAAATCC+AGG | 0.466184 | tig0019271:-165182 | Msa1372230:intron |
| TAACTTAGAAAATGGGACTT+AGG | 0.477877 | tig0019271:+163315 | None:intergenic |
| AATGCTGGCAATGGAAATAG+TGG | 0.481459 | tig0019271:-163981 | Msa1372230:CDS |
| AGAGTGCAAGGGAAGTGAAA+AGG | 0.485974 | tig0019271:+165513 | None:intergenic |
| AATGGAAATAGTGGCAAGAA+AGG | 0.499764 | tig0019271:-163972 | Msa1372230:CDS |
| ACTCAATTGGCTCAATTGGT+TGG | 0.501344 | tig0019271:-163867 | Msa1372230:CDS |
| TCTATGTTAATGAACATGAA+TGG | 0.505347 | tig0019271:-163639 | Msa1372230:CDS |
| TTATGAAGGAAGGTGCTAAT+GGG | 0.505662 | tig0019271:-163929 | Msa1372230:CDS |
| AAATCAGAACATGGTTATGA+AGG | 0.507037 | tig0019271:-163943 | Msa1372230:CDS |
| AAAAGTAATGCAGTGAGAGA+AGG | 0.507323 | tig0019271:+165555 | None:intergenic |
| TTACATTATTGAACAGCTGC+TGG | 0.507630 | tig0019271:+163398 | None:intergenic |
| GTGAGAGAAGGGAAGAGTAA+TGG | 0.507818 | tig0019271:+165567 | None:intergenic |
| TCAACCTTGGAGAATCCAAA+AGG | 0.510252 | tig0019271:-163833 | Msa1372230:CDS |
| TCCACTGCATCTATTCCAAA+TGG | 0.510572 | tig0019271:-163690 | Msa1372230:CDS |
| TCCAAAAGGGCGAGTGACAT+TGG | 0.516238 | tig0019271:-163819 | Msa1372230:CDS |
| GTTCTGCATCTATTTGAACT+TGG | 0.517770 | tig0019271:+164387 | None:intergenic |
| GGGAACAATAACAATGGTGC+TGG | 0.520248 | tig0019271:-163768 | Msa1372230:CDS |
| GATGCAAACAATGTGAAGAA+AGG | 0.525694 | tig0019271:-164023 | Msa1372230:CDS |
| TCTATCTATTATCTACTACT+AGG | 0.526145 | tig0019271:-165324 | Msa1372230:intron |
| TTAAAAGGAGAAAGAGTGCA+AGG | 0.528470 | tig0019271:+165501 | None:intergenic |
| GGTGCTATGATGAATTTAGC+TGG | 0.532345 | tig0019271:-163798 | Msa1372230:CDS |
| GGAAATTCCAATGGTTTAGG+AGG | 0.533330 | tig0019271:-163726 | Msa1372230:CDS |
| AGTGACCTTCAATTCTCTGA+AGG | 0.534789 | tig0019271:+164922 | None:intergenic |
| TGAATATGATGAGGAAGAGG+AGG | 0.535580 | tig0019271:-164114 | Msa1372230:CDS |
| CCAGTGTTAGGAGGAACAAA+AGG | 0.539360 | tig0019271:+163531 | None:intergenic |
| AAGATGAACAATGCTGGCAA+TGG | 0.540672 | tig0019271:-163990 | Msa1372230:CDS |
| GTTCTAGGTGGAAATTCCAA+TGG | 0.542544 | tig0019271:-163735 | Msa1372230:CDS |
| TTATGAATATGATGAGGAAG+AGG | 0.546136 | tig0019271:-164117 | Msa1372230:CDS |
| CTGGAAAATATGCTGAGCTC+TGG | 0.547828 | tig0019271:-164301 | Msa1372230:CDS |
| TAAAAGGAGAAAGAGTGCAA+GGG | 0.551768 | tig0019271:+165502 | None:intergenic |
| TAGTTTGACTGTAATTTGGT+GGG | 0.552324 | tig0019271:-163286 | Msa1372230:three_prime_UTR |
| AGCCTCAGATGATGTATCAC+AGG | 0.555215 | tig0019271:-163557 | Msa1372230:CDS |
| CAGAACATGGTTATGAAGGA+AGG | 0.555580 | tig0019271:-163939 | Msa1372230:CDS |
| ATCTTCATTGATGAACATGC+AGG | 0.556065 | tig0019271:-163601 | Msa1372230:CDS |
| TGCATGTTCATCAATGAAGA+TGG | 0.558115 | tig0019271:+163603 | None:intergenic |
| GTAGTTTGACTGTAATTTGG+TGG | 0.562864 | tig0019271:-163287 | Msa1372230:three_prime_UTR |
| TCCTCTTCGGAACTAAAAGC+CGG | 0.563236 | tig0019271:+164149 | None:intergenic |
| ATAGCTAAGATGAACAATGC+TGG | 0.570218 | tig0019271:-163996 | Msa1372230:CDS |
| ATGTTCATTAACATAGATGG+TGG | 0.570507 | tig0019271:+163645 | None:intergenic |
| AGGAAAACCTCCTAAACCAT+TGG | 0.574088 | tig0019271:+163719 | None:intergenic |
| TGCAAATGCTTGTTATCCAA+CGG | 0.576996 | tig0019271:-163463 | Msa1372230:CDS |
| GTGTAGTAGTTGAGATGATG+TGG | 0.580946 | tig0019271:-163196 | None:intergenic |
| AATAGATGCAGAACAGCAGA+AGG | 0.582210 | tig0019271:-164378 | Msa1372230:CDS |
| CAACCTTGGAGAATCCAAAA+GGG | 0.584061 | tig0019271:-163832 | Msa1372230:CDS |
| ATAGATGCAGTGGATCCTGC+AGG | 0.590027 | tig0019271:+163699 | None:intergenic |
| TAATAATAGCCAGTGTTAGG+AGG | 0.598615 | tig0019271:+163522 | None:intergenic |
| ACCATTTGGAATAGATGCAG+TGG | 0.604596 | tig0019271:+163689 | None:intergenic |
| TGGATAACAAGCATTTGCAT+AGG | 0.605903 | tig0019271:+163467 | None:intergenic |
| GCAAACAAAACAAAGGCACA+TGG | 0.606102 | tig0019271:+165455 | None:intergenic |
| ACTGCATCTATTCCAAATGG+TGG | 0.607866 | tig0019271:-163687 | Msa1372230:CDS |
| TGAAGAGATGCGGTTCATCA+GGG | 0.610395 | tig0019271:-164084 | Msa1372230:CDS |
| AAAGTGAACATTCACTGTGA+TGG | 0.621275 | tig0019271:-164969 | Msa1372230:CDS |
| GGTAATGAAAGTCTCAACCT+TGG | 0.624155 | tig0019271:-163846 | Msa1372230:CDS |
| TTTAATGGGAACAATAACAA+TGG | 0.630005 | tig0019271:-163774 | Msa1372230:CDS |
| CTGTTGCTATTACTAGCTAG+TGG | 0.631368 | tig0019271:+165371 | None:intergenic |
| TGGGATTGATCAGAAAACAA+TGG | 0.638544 | tig0019271:-163910 | Msa1372230:CDS |
| CTCGAAAGCAAACAAAACAA+AGG | 0.646036 | tig0019271:+165448 | None:intergenic |
| AGGAAACCCAAATCAGAACA+TGG | 0.652284 | tig0019271:-163952 | Msa1372230:CDS |
| AGGAGGAGGATGAAGAGATG+CGG | 0.665296 | tig0019271:-164094 | Msa1372230:CDS |
| GCTGCAGAGTGATCCTCCGT+TGG | 0.673839 | tig0019271:+163447 | None:intergenic |
| CAAACAAAACAAAGGCACAT+GGG | 0.674537 | tig0019271:+165456 | None:intergenic |
| GACCTGTGATACATCATCTG+AGG | 0.691567 | tig0019271:+163555 | None:intergenic |
| TGTAGTAGTTGAGATGATGT+GGG | 0.709018 | tig0019271:-163195 | None:intergenic |
| AAATGCTTGTTATCCAACGG+AGG | 0.712494 | tig0019271:-163460 | Msa1372230:CDS |
| GGTAGTGCTACTGTTCTAGG+TGG | 0.717323 | tig0019271:-163747 | Msa1372230:CDS |
| TGAATATTATGAATATGATG+AGG | 0.721112 | tig0019271:-164123 | Msa1372230:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GCATAAAAATAAATTTTAAA+AGG | + | tig0019271:163324-163343 | None:intergenic | 10.0% |
| !!! | GCATAAAAATAAATTTTAAA+AGG | + | tig0019271:163324-163343 | None:intergenic | 10.0% |
| !!! | TTTATGGATAATTTTAACAA+GGG | + | tig0019271:163663-163682 | None:intergenic | 15.0% |
| !!! | TTTTATGGATAATTTTAACA+AGG | + | tig0019271:163664-163683 | None:intergenic | 15.0% |
| !! | ACTAAACTAAAATAATAGAA+GGG | + | tig0019271:163733-163752 | None:intergenic | 15.0% |
| !! | AACTAAACTAAAATAATAGA+AGG | + | tig0019271:163734-163753 | None:intergenic | 15.0% |
| !! | AAAAAAAAAGACCAAATATT+AGG | + | tig0019271:163758-163777 | None:intergenic | 15.0% |
| !!! | TTTATGGATAATTTTAACAA+GGG | + | tig0019271:163663-163682 | None:intergenic | 15.0% |
| !!! | TTTTATGGATAATTTTAACA+AGG | + | tig0019271:163664-163683 | None:intergenic | 15.0% |
| !! | ACTAAACTAAAATAATAGAA+GGG | + | tig0019271:163733-163752 | None:intergenic | 15.0% |
| !! | AACTAAACTAAAATAATAGA+AGG | + | tig0019271:163734-163753 | None:intergenic | 15.0% |
| !! | AAAAAAAAAGACCAAATATT+AGG | + | tig0019271:163758-163777 | None:intergenic | 15.0% |
| !!! | TTATGGATAATTTTAACAAG+GGG | + | tig0019271:163662-163681 | None:intergenic | 20.0% |
| !!! | TAGTTTAGTTTCCTAATATT+TGG | - | tig0019271:163744-163763 | Msa1372230:CDS | 20.0% |
| !!! | ATTTTAACTTCAAGAAAACA+AGG | + | tig0019271:163978-163997 | None:intergenic | 20.0% |
| !! | TTTCTTGAAGTTAAAATGTA+CGG | - | tig0019271:163981-164000 | Msa1372230:CDS | 20.0% |
| !! | AATATAAAAATATCCAAGCA+CGG | + | tig0019271:164373-164392 | None:intergenic | 20.0% |
| !! | TGAATATTATGAATATGATG+AGG | - | tig0019271:164684-164703 | Msa1372230:intron | 20.0% |
| !! | ACTATACTAACTTAGAAAAT+GGG | + | tig0019271:165502-165521 | None:intergenic | 20.0% |
| !! | TACTATACTAACTTAGAAAA+TGG | + | tig0019271:165503-165522 | None:intergenic | 20.0% |
| !!! | TTATGGATAATTTTAACAAG+GGG | + | tig0019271:163662-163681 | None:intergenic | 20.0% |
| !!! | TAGTTTAGTTTCCTAATATT+TGG | - | tig0019271:163744-163763 | Msa1372230:CDS | 20.0% |
| !!! | ATTTTAACTTCAAGAAAACA+AGG | + | tig0019271:163978-163997 | None:intergenic | 20.0% |
| !! | TTTCTTGAAGTTAAAATGTA+CGG | - | tig0019271:163981-164000 | Msa1372230:CDS | 20.0% |
| !! | AATATAAAAATATCCAAGCA+CGG | + | tig0019271:164373-164392 | None:intergenic | 20.0% |
| !! | TGAATATTATGAATATGATG+AGG | - | tig0019271:164684-164703 | Msa1372230:intron | 20.0% |
| !! | ACTATACTAACTTAGAAAAT+GGG | + | tig0019271:165502-165521 | None:intergenic | 20.0% |
| !! | TACTATACTAACTTAGAAAA+TGG | + | tig0019271:165503-165522 | None:intergenic | 20.0% |
| ! | TCTATCTATTATCTACTACT+AGG | - | tig0019271:163483-163502 | Msa1372230:CDS | 25.0% |
| ! | GCAAATGGTAAAACTAAAAA+AGG | + | tig0019271:163535-163554 | None:intergenic | 25.0% |
| !!! | AGCATGTTGTTTTAGTTTTA+TGG | + | tig0019271:163679-163698 | None:intergenic | 25.0% |
| ! | TAAAATAATAGAAGGGAGAA+GGG | + | tig0019271:163726-163745 | None:intergenic | 25.0% |
| !! | TTTAGTTTACTCACAATGAT+GGG | - | tig0019271:164077-164096 | Msa1372230:CDS | 25.0% |
| ! | TTAAAGGGAGACATAAAAAA+TGG | - | tig0019271:164122-164141 | Msa1372230:CDS | 25.0% |
| !!! | GCTACTTTTTAAATCTTCAA+TGG | - | tig0019271:164198-164217 | Msa1372230:CDS | 25.0% |
| ! | TAAACACCTATAGAACAAAA+GGG | + | tig0019271:164400-164419 | None:intergenic | 25.0% |
| ! | AAGAATAAAGGACAAAAACA+AGG | - | tig0019271:164592-164611 | Msa1372230:intron | 25.0% |
| ! | ATAATATTCATCATCCTCTT+CGG | + | tig0019271:164674-164693 | None:intergenic | 25.0% |
| !!! | ATGAATTTAGCTGGTTTTAA+TGG | - | tig0019271:165018-165037 | Msa1372230:intron | 25.0% |
| !!! | TGAATTTAGCTGGTTTTAAT+GGG | - | tig0019271:165019-165038 | Msa1372230:intron | 25.0% |
| ! | TTTAATGGGAACAATAACAA+TGG | - | tig0019271:165033-165052 | Msa1372230:intron | 25.0% |
| ! | TTCATGTTCATTAACATAGA+TGG | + | tig0019271:165168-165187 | None:intergenic | 25.0% |
| ! | TCTATGTTAATGAACATGAA+TGG | - | tig0019271:165168-165187 | Msa1372230:intron | 25.0% |
| ! | ATTGTAGAGTTAAAAAGTGA+AGG | - | tig0019271:165440-165459 | Msa1372230:five_prime_UTR | 25.0% |
| ! | ATAGTAGTTTGACTGTAATT+TGG | - | tig0019271:165517-165536 | Msa1372230:five_prime_UTR | 25.0% |
| ! | TCTATCTATTATCTACTACT+AGG | - | tig0019271:163483-163502 | Msa1372230:CDS | 25.0% |
| ! | GCAAATGGTAAAACTAAAAA+AGG | + | tig0019271:163535-163554 | None:intergenic | 25.0% |
| !!! | AGCATGTTGTTTTAGTTTTA+TGG | + | tig0019271:163679-163698 | None:intergenic | 25.0% |
| ! | TAAAATAATAGAAGGGAGAA+GGG | + | tig0019271:163726-163745 | None:intergenic | 25.0% |
| !! | TTTAGTTTACTCACAATGAT+GGG | - | tig0019271:164077-164096 | Msa1372230:CDS | 25.0% |
| ! | TTAAAGGGAGACATAAAAAA+TGG | - | tig0019271:164122-164141 | Msa1372230:CDS | 25.0% |
| !!! | GCTACTTTTTAAATCTTCAA+TGG | - | tig0019271:164198-164217 | Msa1372230:CDS | 25.0% |
| ! | TAAACACCTATAGAACAAAA+GGG | + | tig0019271:164400-164419 | None:intergenic | 25.0% |
| ! | AAGAATAAAGGACAAAAACA+AGG | - | tig0019271:164592-164611 | Msa1372230:intron | 25.0% |
| ! | ATAATATTCATCATCCTCTT+CGG | + | tig0019271:164674-164693 | None:intergenic | 25.0% |
| !!! | ATGAATTTAGCTGGTTTTAA+TGG | - | tig0019271:165018-165037 | Msa1372230:intron | 25.0% |
| !!! | TGAATTTAGCTGGTTTTAAT+GGG | - | tig0019271:165019-165038 | Msa1372230:intron | 25.0% |
| ! | TTTAATGGGAACAATAACAA+TGG | - | tig0019271:165033-165052 | Msa1372230:intron | 25.0% |
| ! | TTCATGTTCATTAACATAGA+TGG | + | tig0019271:165168-165187 | None:intergenic | 25.0% |
| ! | TCTATGTTAATGAACATGAA+TGG | - | tig0019271:165168-165187 | Msa1372230:intron | 25.0% |
| ! | ATTGTAGAGTTAAAAAGTGA+AGG | - | tig0019271:165440-165459 | Msa1372230:five_prime_UTR | 25.0% |
| ! | ATAGTAGTTTGACTGTAATT+TGG | - | tig0019271:165517-165536 | Msa1372230:five_prime_UTR | 25.0% |
| !!! | CTCACTGCATTACTTTTTAT+TGG | - | tig0019271:163258-163277 | Msa1372230:three_prime_UTR | 30.0% |
| TGTTTGCAAGGAAAAGAATA+AGG | + | tig0019271:163571-163590 | None:intergenic | 30.0% | |
| !!! | CAAGTTTTTTTCTGTTTGCA+AGG | + | tig0019271:163583-163602 | None:intergenic | 30.0% |
| AAAATAATAGAAGGGAGAAG+GGG | + | tig0019271:163725-163744 | None:intergenic | 30.0% | |
| CTAAAATAATAGAAGGGAGA+AGG | + | tig0019271:163727-163746 | None:intergenic | 30.0% | |
| ! | GTTTAGTTTACTCACAATGA+TGG | - | tig0019271:164076-164095 | Msa1372230:CDS | 30.0% |
| TTAGTTTACTCACAATGATG+GGG | - | tig0019271:164078-164097 | Msa1372230:CDS | 30.0% | |
| TTAACTCGCATGACTTATAA+AGG | + | tig0019271:164106-164125 | None:intergenic | 30.0% | |
| TTATAAGTCATGCGAGTTAA+AGG | - | tig0019271:164106-164125 | Msa1372230:CDS | 30.0% | |
| TATAAGTCATGCGAGTTAAA+GGG | - | tig0019271:164107-164126 | Msa1372230:CDS | 30.0% | |
| AAATCTTCAATGGAAAGCTT+AGG | - | tig0019271:164208-164227 | Msa1372230:CDS | 30.0% | |
| ATACCTTAGTGTACACTATA+TGG | - | tig0019271:164291-164310 | Msa1372230:CDS | 30.0% | |
| TATCCATATAGTGTACACTA+AGG | + | tig0019271:164297-164316 | None:intergenic | 30.0% | |
| TAGTGTACACTATATGGATA+TGG | - | tig0019271:164297-164316 | Msa1372230:CDS | 30.0% | |
| GGTTAATGTAAACATCACAT+TGG | - | tig0019271:164318-164337 | Msa1372230:CDS | 30.0% | |
| !!! | AATTTTTTTTTTGCCGTGCT+TGG | - | tig0019271:164357-164376 | Msa1372230:CDS | 30.0% |
| ! | TTTTGACCCTTTTGTTCTAT+AGG | - | tig0019271:164391-164410 | Msa1372230:CDS | 30.0% |
| GTAAACACCTATAGAACAAA+AGG | + | tig0019271:164401-164420 | None:intergenic | 30.0% | |
| ATCAAGAAACTAGTAAGATC+TGG | - | tig0019271:164487-164506 | Msa1372230:intron | 30.0% | |
| !! | CTTTTGATTCTGATTGTTGT+TGG | + | tig0019271:164542-164561 | None:intergenic | 30.0% |
| GTCAAAGATGACAAGAATAA+AGG | - | tig0019271:164580-164599 | Msa1372230:intron | 30.0% | |
| CAAAAATCAGCAGAAATTTC+CGG | - | tig0019271:164639-164658 | Msa1372230:intron | 30.0% | |
| TTATGAATATGATGAGGAAG+AGG | - | tig0019271:164690-164709 | Msa1372230:intron | 30.0% | |
| CTTTAGCATCTGAAAATGAT+TGG | + | tig0019271:164755-164774 | None:intergenic | 30.0% | |
| TCATAACCATGTTCTGATTT+GGG | + | tig0019271:164864-164883 | None:intergenic | 30.0% | |
| TTCATAACCATGTTCTGATT+TGG | + | tig0019271:164865-164884 | None:intergenic | 30.0% | |
| AAATCAGAACATGGTTATGA+AGG | - | tig0019271:164864-164883 | Msa1372230:intron | 30.0% | |
| GAAGTTGAACAATACTCAAT+TGG | - | tig0019271:164927-164946 | Msa1372230:intron | 30.0% | |
| !! | TTAACATAGATGGTGGATAT+TGG | + | tig0019271:165158-165177 | None:intergenic | 30.0% |
| ATGTTCATTAACATAGATGG+TGG | + | tig0019271:165165-165184 | None:intergenic | 30.0% | |
| TTGTAATAATAGCCAGTGTT+AGG | + | tig0019271:165291-165310 | None:intergenic | 30.0% | |
| GAAGGAAAAAAGATGCAAAA+TGG | - | tig0019271:165458-165477 | Msa1372230:five_prime_UTR | 30.0% | |
| TAACTTAGAAAATGGGACTT+AGG | + | tig0019271:165495-165514 | None:intergenic | 30.0% | |
| TAGTTTGACTGTAATTTGGT+GGG | - | tig0019271:165521-165540 | Msa1372230:five_prime_UTR | 30.0% | |
| !!! | CTCACTGCATTACTTTTTAT+TGG | - | tig0019271:163258-163277 | Msa1372230:three_prime_UTR | 30.0% |
| TGTTTGCAAGGAAAAGAATA+AGG | + | tig0019271:163571-163590 | None:intergenic | 30.0% | |
| !!! | CAAGTTTTTTTCTGTTTGCA+AGG | + | tig0019271:163583-163602 | None:intergenic | 30.0% |
| AAAATAATAGAAGGGAGAAG+GGG | + | tig0019271:163725-163744 | None:intergenic | 30.0% | |
| CTAAAATAATAGAAGGGAGA+AGG | + | tig0019271:163727-163746 | None:intergenic | 30.0% | |
| ! | GTTTAGTTTACTCACAATGA+TGG | - | tig0019271:164076-164095 | Msa1372230:CDS | 30.0% |
| TTAGTTTACTCACAATGATG+GGG | - | tig0019271:164078-164097 | Msa1372230:CDS | 30.0% | |
| TTAACTCGCATGACTTATAA+AGG | + | tig0019271:164106-164125 | None:intergenic | 30.0% | |
| TTATAAGTCATGCGAGTTAA+AGG | - | tig0019271:164106-164125 | Msa1372230:CDS | 30.0% | |
| TATAAGTCATGCGAGTTAAA+GGG | - | tig0019271:164107-164126 | Msa1372230:CDS | 30.0% | |
| AAATCTTCAATGGAAAGCTT+AGG | - | tig0019271:164208-164227 | Msa1372230:CDS | 30.0% | |
| ATACCTTAGTGTACACTATA+TGG | - | tig0019271:164291-164310 | Msa1372230:CDS | 30.0% | |
| TATCCATATAGTGTACACTA+AGG | + | tig0019271:164297-164316 | None:intergenic | 30.0% | |
| TAGTGTACACTATATGGATA+TGG | - | tig0019271:164297-164316 | Msa1372230:CDS | 30.0% | |
| GGTTAATGTAAACATCACAT+TGG | - | tig0019271:164318-164337 | Msa1372230:CDS | 30.0% | |
| !!! | AATTTTTTTTTTGCCGTGCT+TGG | - | tig0019271:164357-164376 | Msa1372230:CDS | 30.0% |
| ! | TTTTGACCCTTTTGTTCTAT+AGG | - | tig0019271:164391-164410 | Msa1372230:CDS | 30.0% |
| GTAAACACCTATAGAACAAA+AGG | + | tig0019271:164401-164420 | None:intergenic | 30.0% | |
| ATCAAGAAACTAGTAAGATC+TGG | - | tig0019271:164487-164506 | Msa1372230:intron | 30.0% | |
| !! | CTTTTGATTCTGATTGTTGT+TGG | + | tig0019271:164542-164561 | None:intergenic | 30.0% |
| GTCAAAGATGACAAGAATAA+AGG | - | tig0019271:164580-164599 | Msa1372230:intron | 30.0% | |
| CAAAAATCAGCAGAAATTTC+CGG | - | tig0019271:164639-164658 | Msa1372230:intron | 30.0% | |
| TTATGAATATGATGAGGAAG+AGG | - | tig0019271:164690-164709 | Msa1372230:intron | 30.0% | |
| CTTTAGCATCTGAAAATGAT+TGG | + | tig0019271:164755-164774 | None:intergenic | 30.0% | |
| TCATAACCATGTTCTGATTT+GGG | + | tig0019271:164864-164883 | None:intergenic | 30.0% | |
| TTCATAACCATGTTCTGATT+TGG | + | tig0019271:164865-164884 | None:intergenic | 30.0% | |
| AAATCAGAACATGGTTATGA+AGG | - | tig0019271:164864-164883 | Msa1372230:intron | 30.0% | |
| GAAGTTGAACAATACTCAAT+TGG | - | tig0019271:164927-164946 | Msa1372230:intron | 30.0% | |
| !! | TTAACATAGATGGTGGATAT+TGG | + | tig0019271:165158-165177 | None:intergenic | 30.0% |
| ATGTTCATTAACATAGATGG+TGG | + | tig0019271:165165-165184 | None:intergenic | 30.0% | |
| TTGTAATAATAGCCAGTGTT+AGG | + | tig0019271:165291-165310 | None:intergenic | 30.0% | |
| GAAGGAAAAAAGATGCAAAA+TGG | - | tig0019271:165458-165477 | Msa1372230:five_prime_UTR | 30.0% | |
| TAACTTAGAAAATGGGACTT+AGG | + | tig0019271:165495-165514 | None:intergenic | 30.0% | |
| TAGTTTGACTGTAATTTGGT+GGG | - | tig0019271:165521-165540 | Msa1372230:five_prime_UTR | 30.0% | |
| AAAGTAATGCAGTGAGAGAA+GGG | + | tig0019271:163254-163273 | None:intergenic | 35.0% | |
| AAAAGTAATGCAGTGAGAGA+AGG | + | tig0019271:163255-163274 | None:intergenic | 35.0% | |
| ! | TAAAAGGAGAAAGAGTGCAA+GGG | + | tig0019271:163308-163327 | None:intergenic | 35.0% |
| ! | TTAAAAGGAGAAAGAGTGCA+AGG | + | tig0019271:163309-163328 | None:intergenic | 35.0% |
| ! | CAAACAAAACAAAGGCACAT+GGG | + | tig0019271:163354-163373 | None:intergenic | 35.0% |
| CTCGAAAGCAAACAAAACAA+AGG | + | tig0019271:163362-163381 | None:intergenic | 35.0% | |
| TGCAAGGAAAAGAATAAGGT+AGG | + | tig0019271:163567-163586 | None:intergenic | 35.0% | |
| CTTTAAGCTCCTTAAAATCC+AGG | - | tig0019271:163625-163644 | Msa1372230:CDS | 35.0% | |
| !!! | AAAGAGGTACCTGGATTTTA+AGG | + | tig0019271:163637-163656 | None:intergenic | 35.0% |
| !! | ATTTTAACAAGGGGAGAAAG+AGG | + | tig0019271:163653-163672 | None:intergenic | 35.0% |
| AAATAATAGAAGGGAGAAGG+GGG | + | tig0019271:163724-163743 | None:intergenic | 35.0% | |
| AAAGTGAACATTCACTGTGA+TGG | - | tig0019271:163838-163857 | Msa1372230:CDS | 35.0% | |
| AAACTCCTTCAGAGAATTGA+AGG | - | tig0019271:163880-163899 | Msa1372230:CDS | 35.0% | |
| !! | AACTGTTTTGTTGCAACAAG+TGG | - | tig0019271:164164-164183 | Msa1372230:CDS | 35.0% |
| TGGAAAGCTTAGGCTATAAA+AGG | - | tig0019271:164218-164237 | Msa1372230:CDS | 35.0% | |
| GTTCTGCATCTATTTGAACT+TGG | + | tig0019271:164423-164442 | None:intergenic | 35.0% | |
| TAAAGGACAAAAACAAGGAC+TGG | - | tig0019271:164597-164616 | Msa1372230:intron | 35.0% | |
| !! | AAAAACAAGGACTGGTCAAA+GGG | - | tig0019271:164605-164624 | Msa1372230:intron | 35.0% |
| GATGCAAACAATGTGAAGAA+AGG | - | tig0019271:164784-164803 | Msa1372230:intron | 35.0% | |
| ATAGCTAAGATGAACAATGC+TGG | - | tig0019271:164811-164830 | Msa1372230:intron | 35.0% | |
| AATGGAAATAGTGGCAAGAA+AGG | - | tig0019271:164835-164854 | Msa1372230:intron | 35.0% | |
| !! | TTATGAAGGAAGGTGCTAAT+GGG | - | tig0019271:164878-164897 | Msa1372230:intron | 35.0% |
| TGGGATTGATCAGAAAACAA+TGG | - | tig0019271:164897-164916 | Msa1372230:intron | 35.0% | |
| ! | CAATACTCAATTGGCTCAAT+TGG | - | tig0019271:164936-164955 | Msa1372230:CDS | 35.0% |
| TGCATGTTCATCAATGAAGA+TGG | + | tig0019271:165207-165226 | None:intergenic | 35.0% | |
| ATCTTCATTGATGAACATGC+AGG | - | tig0019271:165206-165225 | Msa1372230:exon | 35.0% | |
| TAATAATAGCCAGTGTTAGG+AGG | + | tig0019271:165288-165307 | None:intergenic | 35.0% | |
| ! | TTTGCATAGGAGTAATTTGC+AGG | + | tig0019271:165330-165349 | None:intergenic | 35.0% |
| TGGATAACAAGCATTTGCAT+AGG | + | tig0019271:165343-165362 | None:intergenic | 35.0% | |
| !! | TGCAAATGCTTGTTATCCAA+CGG | - | tig0019271:165344-165363 | Msa1372230:five_prime_UTR | 35.0% |
| TTACATTATTGAACAGCTGC+TGG | + | tig0019271:165412-165431 | None:intergenic | 35.0% | |
| GTAGTTTGACTGTAATTTGG+TGG | - | tig0019271:165520-165539 | Msa1372230:five_prime_UTR | 35.0% | |
| AAAGTAATGCAGTGAGAGAA+GGG | + | tig0019271:163254-163273 | None:intergenic | 35.0% | |
| AAAAGTAATGCAGTGAGAGA+AGG | + | tig0019271:163255-163274 | None:intergenic | 35.0% | |
| ! | TAAAAGGAGAAAGAGTGCAA+GGG | + | tig0019271:163308-163327 | None:intergenic | 35.0% |
| ! | TTAAAAGGAGAAAGAGTGCA+AGG | + | tig0019271:163309-163328 | None:intergenic | 35.0% |
| ! | CAAACAAAACAAAGGCACAT+GGG | + | tig0019271:163354-163373 | None:intergenic | 35.0% |
| CTCGAAAGCAAACAAAACAA+AGG | + | tig0019271:163362-163381 | None:intergenic | 35.0% | |
| TGCAAGGAAAAGAATAAGGT+AGG | + | tig0019271:163567-163586 | None:intergenic | 35.0% | |
| CTTTAAGCTCCTTAAAATCC+AGG | - | tig0019271:163625-163644 | Msa1372230:CDS | 35.0% | |
| !!! | AAAGAGGTACCTGGATTTTA+AGG | + | tig0019271:163637-163656 | None:intergenic | 35.0% |
| !! | ATTTTAACAAGGGGAGAAAG+AGG | + | tig0019271:163653-163672 | None:intergenic | 35.0% |
| AAATAATAGAAGGGAGAAGG+GGG | + | tig0019271:163724-163743 | None:intergenic | 35.0% | |
| AAAGTGAACATTCACTGTGA+TGG | - | tig0019271:163838-163857 | Msa1372230:CDS | 35.0% | |
| AAACTCCTTCAGAGAATTGA+AGG | - | tig0019271:163880-163899 | Msa1372230:CDS | 35.0% | |
| !! | AACTGTTTTGTTGCAACAAG+TGG | - | tig0019271:164164-164183 | Msa1372230:CDS | 35.0% |
| TGGAAAGCTTAGGCTATAAA+AGG | - | tig0019271:164218-164237 | Msa1372230:CDS | 35.0% | |
| GTTCTGCATCTATTTGAACT+TGG | + | tig0019271:164423-164442 | None:intergenic | 35.0% | |
| TAAAGGACAAAAACAAGGAC+TGG | - | tig0019271:164597-164616 | Msa1372230:intron | 35.0% | |
| !! | AAAAACAAGGACTGGTCAAA+GGG | - | tig0019271:164605-164624 | Msa1372230:intron | 35.0% |
| GATGCAAACAATGTGAAGAA+AGG | - | tig0019271:164784-164803 | Msa1372230:intron | 35.0% | |
| ATAGCTAAGATGAACAATGC+TGG | - | tig0019271:164811-164830 | Msa1372230:intron | 35.0% | |
| AATGGAAATAGTGGCAAGAA+AGG | - | tig0019271:164835-164854 | Msa1372230:intron | 35.0% | |
| !! | TTATGAAGGAAGGTGCTAAT+GGG | - | tig0019271:164878-164897 | Msa1372230:intron | 35.0% |
| TGGGATTGATCAGAAAACAA+TGG | - | tig0019271:164897-164916 | Msa1372230:intron | 35.0% | |
| ! | CAATACTCAATTGGCTCAAT+TGG | - | tig0019271:164936-164955 | Msa1372230:CDS | 35.0% |
| TGCATGTTCATCAATGAAGA+TGG | + | tig0019271:165207-165226 | None:intergenic | 35.0% | |
| ATCTTCATTGATGAACATGC+AGG | - | tig0019271:165206-165225 | Msa1372230:exon | 35.0% | |
| TAATAATAGCCAGTGTTAGG+AGG | + | tig0019271:165288-165307 | None:intergenic | 35.0% | |
| ! | TTTGCATAGGAGTAATTTGC+AGG | + | tig0019271:165330-165349 | None:intergenic | 35.0% |
| TGGATAACAAGCATTTGCAT+AGG | + | tig0019271:165343-165362 | None:intergenic | 35.0% | |
| !! | TGCAAATGCTTGTTATCCAA+CGG | - | tig0019271:165344-165363 | Msa1372230:five_prime_UTR | 35.0% |
| TTACATTATTGAACAGCTGC+TGG | + | tig0019271:165412-165431 | None:intergenic | 35.0% | |
| GTAGTTTGACTGTAATTTGG+TGG | - | tig0019271:165520-165539 | Msa1372230:five_prime_UTR | 35.0% | |
| ! | GCAAACAAAACAAAGGCACA+TGG | + | tig0019271:163355-163374 | None:intergenic | 40.0% |
| ! | CTGTTGCTATTACTAGCTAG+TGG | + | tig0019271:163439-163458 | None:intergenic | 40.0% |
| GGTAGGTTAAGCTAAGCAAA+TGG | + | tig0019271:163550-163569 | None:intergenic | 40.0% | |
| AATAATAGAAGGGAGAAGGG+GGG | + | tig0019271:163723-163742 | None:intergenic | 40.0% | |
| AGTGACCTTCAATTCTCTGA+AGG | + | tig0019271:163888-163907 | None:intergenic | 40.0% | |
| AATAGATGCAGAACAGCAGA+AGG | - | tig0019271:164429-164448 | Msa1372230:intron | 40.0% | |
| !! | CAAAAACAAGGACTGGTCAA+AGG | - | tig0019271:164604-164623 | Msa1372230:intron | 40.0% |
| TGAATATGATGAGGAAGAGG+AGG | - | tig0019271:164693-164712 | Msa1372230:intron | 40.0% | |
| AAGATGAACAATGCTGGCAA+TGG | - | tig0019271:164817-164836 | Msa1372230:intron | 40.0% | |
| AATGCTGGCAATGGAAATAG+TGG | - | tig0019271:164826-164845 | Msa1372230:intron | 40.0% | |
| AGGAAACCCAAATCAGAACA+TGG | - | tig0019271:164855-164874 | Msa1372230:intron | 40.0% | |
| CAGAACATGGTTATGAAGGA+AGG | - | tig0019271:164868-164887 | Msa1372230:intron | 40.0% | |
| !! | GTTATGAAGGAAGGTGCTAA+TGG | - | tig0019271:164877-164896 | Msa1372230:intron | 40.0% |
| ! | ACTCAATTGGCTCAATTGGT+TGG | - | tig0019271:164940-164959 | Msa1372230:CDS | 40.0% |
| GGTAATGAAAGTCTCAACCT+TGG | - | tig0019271:164961-164980 | Msa1372230:CDS | 40.0% | |
| TCAACCTTGGAGAATCCAAA+AGG | - | tig0019271:164974-164993 | Msa1372230:CDS | 40.0% | |
| CAACCTTGGAGAATCCAAAA+GGG | - | tig0019271:164975-164994 | Msa1372230:CDS | 40.0% | |
| ! | GGTGCTATGATGAATTTAGC+TGG | - | tig0019271:165009-165028 | Msa1372230:intron | 40.0% |
| ! | GTTCTAGGTGGAAATTCCAA+TGG | - | tig0019271:165072-165091 | Msa1372230:intron | 40.0% |
| GGTGGAAATTCCAATGGTTT+AGG | - | tig0019271:165078-165097 | Msa1372230:intron | 40.0% | |
| GGAAATTCCAATGGTTTAGG+AGG | - | tig0019271:165081-165100 | Msa1372230:intron | 40.0% | |
| AGGAAAACCTCCTAAACCAT+TGG | + | tig0019271:165091-165110 | None:intergenic | 40.0% | |
| TCCACTGCATCTATTCCAAA+TGG | - | tig0019271:165117-165136 | Msa1372230:intron | 40.0% | |
| ! | ACCATTTGGAATAGATGCAG+TGG | + | tig0019271:165121-165140 | None:intergenic | 40.0% |
| ACTGCATCTATTCCAAATGG+TGG | - | tig0019271:165120-165139 | Msa1372230:intron | 40.0% | |
| CCAGTAACAAAACCACCATT+TGG | + | tig0019271:165135-165154 | None:intergenic | 40.0% | |
| !!! | CCAAATGGTGGTTTTGTTAC+TGG | - | tig0019271:165132-165151 | Msa1372230:intron | 40.0% |
| !! | AAATGCTTGTTATCCAACGG+AGG | - | tig0019271:165347-165366 | Msa1372230:five_prime_UTR | 40.0% |
| ACAGGTTTGTGTTAGGATGT+TGG | - | tig0019271:165544-165563 | Msa1372230:five_prime_UTR | 40.0% | |
| ! | GCAAACAAAACAAAGGCACA+TGG | + | tig0019271:163355-163374 | None:intergenic | 40.0% |
| ! | CTGTTGCTATTACTAGCTAG+TGG | + | tig0019271:163439-163458 | None:intergenic | 40.0% |
| GGTAGGTTAAGCTAAGCAAA+TGG | + | tig0019271:163550-163569 | None:intergenic | 40.0% | |
| AATAATAGAAGGGAGAAGGG+GGG | + | tig0019271:163723-163742 | None:intergenic | 40.0% | |
| AGTGACCTTCAATTCTCTGA+AGG | + | tig0019271:163888-163907 | None:intergenic | 40.0% | |
| AATAGATGCAGAACAGCAGA+AGG | - | tig0019271:164429-164448 | Msa1372230:intron | 40.0% | |
| !! | CAAAAACAAGGACTGGTCAA+AGG | - | tig0019271:164604-164623 | Msa1372230:intron | 40.0% |
| TGAATATGATGAGGAAGAGG+AGG | - | tig0019271:164693-164712 | Msa1372230:intron | 40.0% | |
| AAGATGAACAATGCTGGCAA+TGG | - | tig0019271:164817-164836 | Msa1372230:intron | 40.0% | |
| AATGCTGGCAATGGAAATAG+TGG | - | tig0019271:164826-164845 | Msa1372230:intron | 40.0% | |
| AGGAAACCCAAATCAGAACA+TGG | - | tig0019271:164855-164874 | Msa1372230:intron | 40.0% | |
| CAGAACATGGTTATGAAGGA+AGG | - | tig0019271:164868-164887 | Msa1372230:intron | 40.0% | |
| !! | GTTATGAAGGAAGGTGCTAA+TGG | - | tig0019271:164877-164896 | Msa1372230:intron | 40.0% |
| ! | ACTCAATTGGCTCAATTGGT+TGG | - | tig0019271:164940-164959 | Msa1372230:CDS | 40.0% |
| GGTAATGAAAGTCTCAACCT+TGG | - | tig0019271:164961-164980 | Msa1372230:CDS | 40.0% | |
| TCAACCTTGGAGAATCCAAA+AGG | - | tig0019271:164974-164993 | Msa1372230:CDS | 40.0% | |
| CAACCTTGGAGAATCCAAAA+GGG | - | tig0019271:164975-164994 | Msa1372230:CDS | 40.0% | |
| ! | GGTGCTATGATGAATTTAGC+TGG | - | tig0019271:165009-165028 | Msa1372230:intron | 40.0% |
| ! | GTTCTAGGTGGAAATTCCAA+TGG | - | tig0019271:165072-165091 | Msa1372230:intron | 40.0% |
| GGTGGAAATTCCAATGGTTT+AGG | - | tig0019271:165078-165097 | Msa1372230:intron | 40.0% | |
| GGAAATTCCAATGGTTTAGG+AGG | - | tig0019271:165081-165100 | Msa1372230:intron | 40.0% | |
| AGGAAAACCTCCTAAACCAT+TGG | + | tig0019271:165091-165110 | None:intergenic | 40.0% | |
| TCCACTGCATCTATTCCAAA+TGG | - | tig0019271:165117-165136 | Msa1372230:intron | 40.0% | |
| ! | ACCATTTGGAATAGATGCAG+TGG | + | tig0019271:165121-165140 | None:intergenic | 40.0% |
| ACTGCATCTATTCCAAATGG+TGG | - | tig0019271:165120-165139 | Msa1372230:intron | 40.0% | |
| CCAGTAACAAAACCACCATT+TGG | + | tig0019271:165135-165154 | None:intergenic | 40.0% | |
| !!! | CCAAATGGTGGTTTTGTTAC+TGG | - | tig0019271:165132-165151 | Msa1372230:intron | 40.0% |
| !! | AAATGCTTGTTATCCAACGG+AGG | - | tig0019271:165347-165366 | Msa1372230:five_prime_UTR | 40.0% |
| ACAGGTTTGTGTTAGGATGT+TGG | - | tig0019271:165544-165563 | Msa1372230:five_prime_UTR | 40.0% | |
| TGAATGAGAGAGAGAGAGAG+AGG | + | tig0019271:163200-163219 | None:intergenic | 45.0% | |
| GTGAGAGAAGGGAAGAGTAA+TGG | + | tig0019271:163243-163262 | None:intergenic | 45.0% | |
| AGAGTGCAAGGGAAGTGAAA+AGG | + | tig0019271:163297-163316 | None:intergenic | 45.0% | |
| CAGCAGAAGGTAACAGTTTC+AGG | - | tig0019271:164442-164461 | Msa1372230:intron | 45.0% | |
| CTGGAAAATATGCTGAGCTC+TGG | - | tig0019271:164506-164525 | Msa1372230:intron | 45.0% | |
| TCCTCTTCGGAACTAAAAGC+CGG | + | tig0019271:164661-164680 | None:intergenic | 45.0% | |
| ATATGATGAGGAAGAGGAGG+AGG | - | tig0019271:164696-164715 | Msa1372230:intron | 45.0% | |
| ATGAAGAGATGCGGTTCATC+AGG | - | tig0019271:164722-164741 | Msa1372230:intron | 45.0% | |
| TGAAGAGATGCGGTTCATCA+GGG | - | tig0019271:164723-164742 | Msa1372230:intron | 45.0% | |
| GGGAACAATAACAATGGTGC+TGG | - | tig0019271:165039-165058 | Msa1372230:intron | 45.0% | |
| AGCCTCAGATGATGTATCAC+AGG | - | tig0019271:165250-165269 | Msa1372230:intron | 45.0% | |
| GACCTGTGATACATCATCTG+AGG | + | tig0019271:165255-165274 | None:intergenic | 45.0% | |
| CCAGTGTTAGGAGGAACAAA+AGG | + | tig0019271:165279-165298 | None:intergenic | 45.0% | |
| ! | CCTTTTGTTCCTCCTAACAC+TGG | - | tig0019271:165276-165295 | Msa1372230:intron | 45.0% |
| ! | TGACTGTAATTTGGTGGGAC+AGG | - | tig0019271:165526-165545 | Msa1372230:five_prime_UTR | 45.0% |
| TGAATGAGAGAGAGAGAGAG+AGG | + | tig0019271:163200-163219 | None:intergenic | 45.0% | |
| GTGAGAGAAGGGAAGAGTAA+TGG | + | tig0019271:163243-163262 | None:intergenic | 45.0% | |
| AGAGTGCAAGGGAAGTGAAA+AGG | + | tig0019271:163297-163316 | None:intergenic | 45.0% | |
| CAGCAGAAGGTAACAGTTTC+AGG | - | tig0019271:164442-164461 | Msa1372230:intron | 45.0% | |
| CTGGAAAATATGCTGAGCTC+TGG | - | tig0019271:164506-164525 | Msa1372230:intron | 45.0% | |
| TCCTCTTCGGAACTAAAAGC+CGG | + | tig0019271:164661-164680 | None:intergenic | 45.0% | |
| ATATGATGAGGAAGAGGAGG+AGG | - | tig0019271:164696-164715 | Msa1372230:intron | 45.0% | |
| ATGAAGAGATGCGGTTCATC+AGG | - | tig0019271:164722-164741 | Msa1372230:intron | 45.0% | |
| TGAAGAGATGCGGTTCATCA+GGG | - | tig0019271:164723-164742 | Msa1372230:intron | 45.0% | |
| GGGAACAATAACAATGGTGC+TGG | - | tig0019271:165039-165058 | Msa1372230:intron | 45.0% | |
| AGCCTCAGATGATGTATCAC+AGG | - | tig0019271:165250-165269 | Msa1372230:intron | 45.0% | |
| GACCTGTGATACATCATCTG+AGG | + | tig0019271:165255-165274 | None:intergenic | 45.0% | |
| CCAGTGTTAGGAGGAACAAA+AGG | + | tig0019271:165279-165298 | None:intergenic | 45.0% | |
| ! | CCTTTTGTTCCTCCTAACAC+TGG | - | tig0019271:165276-165295 | Msa1372230:intron | 45.0% |
| ! | TGACTGTAATTTGGTGGGAC+AGG | - | tig0019271:165526-165545 | Msa1372230:five_prime_UTR | 45.0% |
| !!! | AAAGATATTTTTAAAAAAAA+AGG | + | tig0019271:164264-164283 | None:intergenic | 5.0% |
| !!! | AAAGATATTTTTAAAAAAAA+AGG | + | tig0019271:164264-164283 | None:intergenic | 5.0% |
| !!! | TCCGGCTTTTAGTTCCGAAG+AGG | - | tig0019271:164657-164676 | Msa1372230:intron | 50.0% |
| AGGAGGAGGATGAAGAGATG+CGG | - | tig0019271:164713-164732 | Msa1372230:intron | 50.0% | |
| ! | TCGCCCTTTTGGATTCTCCA+AGG | + | tig0019271:164981-165000 | None:intergenic | 50.0% |
| TCCAAAAGGGCGAGTGACAT+TGG | - | tig0019271:164988-165007 | Msa1372230:intron | 50.0% | |
| ! | ACCAATGTCACTCGCCCTTT+TGG | + | tig0019271:164992-165011 | None:intergenic | 50.0% |
| ! | GCTGGTAGTGCTACTGTTCT+AGG | - | tig0019271:165057-165076 | Msa1372230:intron | 50.0% |
| ! | GGTAGTGCTACTGTTCTAGG+TGG | - | tig0019271:165060-165079 | Msa1372230:intron | 50.0% |
| ! | GGTTTAGGAGGTTTTCCTGC+AGG | - | tig0019271:165093-165112 | Msa1372230:intron | 50.0% |
| ATAGATGCAGTGGATCCTGC+AGG | + | tig0019271:165111-165130 | None:intergenic | 50.0% | |
| TGGTGGGACAGGTTTGTGTT+AGG | - | tig0019271:165537-165556 | Msa1372230:five_prime_UTR | 50.0% | |
| !!! | TCCGGCTTTTAGTTCCGAAG+AGG | - | tig0019271:164657-164676 | Msa1372230:intron | 50.0% |
| AGGAGGAGGATGAAGAGATG+CGG | - | tig0019271:164713-164732 | Msa1372230:intron | 50.0% | |
| ! | TCGCCCTTTTGGATTCTCCA+AGG | + | tig0019271:164981-165000 | None:intergenic | 50.0% |
| TCCAAAAGGGCGAGTGACAT+TGG | - | tig0019271:164988-165007 | Msa1372230:intron | 50.0% | |
| ! | ACCAATGTCACTCGCCCTTT+TGG | + | tig0019271:164992-165011 | None:intergenic | 50.0% |
| ! | GCTGGTAGTGCTACTGTTCT+AGG | - | tig0019271:165057-165076 | Msa1372230:intron | 50.0% |
| ! | GGTAGTGCTACTGTTCTAGG+TGG | - | tig0019271:165060-165079 | Msa1372230:intron | 50.0% |
| ! | GGTTTAGGAGGTTTTCCTGC+AGG | - | tig0019271:165093-165112 | Msa1372230:intron | 50.0% |
| ATAGATGCAGTGGATCCTGC+AGG | + | tig0019271:165111-165130 | None:intergenic | 50.0% | |
| TGGTGGGACAGGTTTGTGTT+AGG | - | tig0019271:165537-165556 | Msa1372230:five_prime_UTR | 50.0% | |
| !! | CAAGGGGAGAAAGAGGTACC+TGG | + | tig0019271:163646-163665 | None:intergenic | 55.0% |
| TGATGAGGAAGAGGAGGAGG+AGG | - | tig0019271:164699-164718 | Msa1372230:intron | 55.0% | |
| !! | CAAGGGGAGAAAGAGGTACC+TGG | + | tig0019271:163646-163665 | None:intergenic | 55.0% |
| TGATGAGGAAGAGGAGGAGG+AGG | - | tig0019271:164699-164718 | Msa1372230:intron | 55.0% | |
| GCTGCAGAGTGATCCTCCGT+TGG | + | tig0019271:165363-165382 | None:intergenic | 60.0% | |
| GCTGCAGAGTGATCCTCCGT+TGG | + | tig0019271:165363-165382 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0019271 | gene | 163197 | 165632 | 163197 | ID=Msa1372230;Name=Msa1372230 |
| tig0019271 | mRNA | 163197 | 165632 | 163197 | ID=Msa1372230-mRNA-1;Parent=Msa1372230;Name=Msa1372230-mRNA-1;_AED=0.01;_eAED=0.01;_QI=324|1|1|1|0.66|0.5|4|201|377 |
| tig0019271 | exon | 163197 | 164416 | 163197 | ID=Msa1372230-mRNA-1:exon:2610;Parent=Msa1372230-mRNA-1 |
| tig0019271 | exon | 164928 | 165003 | 164928 | ID=Msa1372230-mRNA-1:exon:2609;Parent=Msa1372230-mRNA-1 |
| tig0019271 | exon | 165183 | 165237 | 165183 | ID=Msa1372230-mRNA-1:exon:2608;Parent=Msa1372230-mRNA-1 |
| tig0019271 | exon | 165325 | 165632 | 165325 | ID=Msa1372230-mRNA-1:exon:2607;Parent=Msa1372230-mRNA-1 |
| tig0019271 | five_prime_UTR | 165325 | 165632 | 165325 | ID=Msa1372230-mRNA-1:five_prime_utr;Parent=Msa1372230-mRNA-1 |
| tig0019271 | five_prime_UTR | 165222 | 165237 | 165222 | ID=Msa1372230-mRNA-1:five_prime_utr;Parent=Msa1372230-mRNA-1 |
| tig0019271 | CDS | 165183 | 165221 | 165183 | ID=Msa1372230-mRNA-1:cds;Parent=Msa1372230-mRNA-1 |
| tig0019271 | CDS | 164928 | 165003 | 164928 | ID=Msa1372230-mRNA-1:cds;Parent=Msa1372230-mRNA-1 |
| tig0019271 | CDS | 163398 | 164416 | 163398 | ID=Msa1372230-mRNA-1:cds;Parent=Msa1372230-mRNA-1 |
| tig0019271 | three_prime_UTR | 163197 | 163397 | 163197 | ID=Msa1372230-mRNA-1:three_prime_utr;Parent=Msa1372230-mRNA-1 |
| Gene Sequence |
| Protein sequence |
