Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0230740 | XP_024631981.1 | 86.755 | 151 | 19 | 1 | 4 | 153 | 170 | 320 | 7.00e-90 | 275 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0230740 | sp|P36908|CHIA_CICAR | 45.455 | 132 | 66 | 2 | 6 | 136 | 167 | 293 | 1.43e-31 | 117 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0230740 | A0A396JAW1 | 86.755 | 151 | 19 | 1 | 4 | 153 | 170 | 320 | 3.35e-90 | 275 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000190 | Msa0230740 | 0.850158 | 2.034393e-60 | -8.615850e-47 |
| Msa0004640 | Msa0230740 | 0.801094 | 1.058713e-48 | -8.615850e-47 |
| Msa0005890 | Msa0230740 | 0.815855 | 7.464350e-52 | -8.615850e-47 |
| Msa0017510 | Msa0230740 | 0.835726 | 1.418497e-56 | -8.615850e-47 |
| Msa0021500 | Msa0230740 | 0.806294 | 8.820463e-50 | -8.615850e-47 |
| Msa0024550 | Msa0230740 | 0.831589 | 1.532477e-55 | -8.615850e-47 |
| Msa0028420 | Msa0230740 | 0.813423 | 2.578479e-51 | -8.615850e-47 |
| Msa0028580 | Msa0230740 | 0.807477 | 4.959555e-50 | -8.615850e-47 |
| Msa0042610 | Msa0230740 | 0.808483 | 3.029705e-50 | -8.615850e-47 |
| Msa0055450 | Msa0230740 | 0.813674 | 2.271118e-51 | -8.615850e-47 |
| Msa0074240 | Msa0230740 | 0.823076 | 1.682569e-53 | -8.615850e-47 |
| Msa0076250 | Msa0230740 | 0.834382 | 3.095754e-56 | -8.615850e-47 |
| Msa0081050 | Msa0230740 | 0.802146 | 6.443669e-49 | -8.615850e-47 |
| Msa0089630 | Msa0230740 | 0.837726 | 4.383854e-57 | -8.615850e-47 |
| Msa0094140 | Msa0230740 | 0.803717 | 3.051252e-49 | -8.615850e-47 |
| Msa0120400 | Msa0230740 | 0.831648 | 1.481561e-55 | -8.615850e-47 |
| Msa0122040 | Msa0230740 | 0.802827 | 4.662851e-49 | -8.615850e-47 |
| Msa0124060 | Msa0230740 | 0.810537 | 1.097423e-50 | -8.615850e-47 |
| Msa0124280 | Msa0230740 | 0.826040 | 3.374735e-54 | -8.615850e-47 |
| Msa0131900 | Msa0230740 | 0.805657 | 1.201050e-49 | -8.615850e-47 |
| Msa0139060 | Msa0230740 | 0.804343 | 2.261282e-49 | -8.615850e-47 |
| Msa0146040 | Msa0230740 | 0.804696 | 1.908772e-49 | -8.615850e-47 |
| Msa0157290 | Msa0230740 | 0.835793 | 1.364531e-56 | -8.615850e-47 |
| Msa0164330 | Msa0230740 | 0.817930 | 2.554522e-52 | -8.615850e-47 |
| Msa0168500 | Msa0230740 | 0.819683 | 1.020869e-52 | -8.615850e-47 |
| Msa0168650 | Msa0230740 | 0.810552 | 1.089222e-50 | -8.615850e-47 |
| Msa0178560 | Msa0230740 | 0.824980 | 6.015475e-54 | -8.615850e-47 |
| Msa0192540 | Msa0230740 | 0.803508 | 3.372130e-49 | -8.615850e-47 |
| Msa0200260 | Msa0230740 | 0.804454 | 2.144101e-49 | -8.615850e-47 |
| Msa0225760 | Msa0230740 | 0.801435 | 9.018316e-49 | -8.615850e-47 |
| Msa0225860 | Msa0230740 | 0.810814 | 9.561310e-51 | -8.615850e-47 |
| Msa0230740 | Msa0230750 | 0.925654 | 1.368025e-90 | -8.615850e-47 |
| Msa0230740 | Msa0243100 | 0.830200 | 3.356944e-55 | -8.615850e-47 |
| Msa0230740 | Msa0260610 | 0.801142 | 1.035054e-48 | -8.615850e-47 |
| Msa0230740 | Msa0260670 | 0.806253 | 8.998616e-50 | -8.615850e-47 |
| Msa0230740 | Msa0261340 | 0.829462 | 5.079632e-55 | -8.615850e-47 |
| Msa0230740 | Msa0277180 | 0.810923 | 9.054670e-51 | -8.615850e-47 |
| Msa0230740 | Msa0284420 | 0.800702 | 1.273422e-48 | -8.615850e-47 |
| Msa0230740 | Msa0287740 | 0.803074 | 4.146467e-49 | -8.615850e-47 |
| Msa0230740 | Msa0292400 | 0.801117 | 1.047667e-48 | -8.615850e-47 |
| Msa0230740 | Msa0302170 | 0.819979 | 8.736408e-53 | -8.615850e-47 |
| Msa0230740 | Msa0338510 | 0.800019 | 1.753708e-48 | -8.615850e-47 |
| Msa0230740 | Msa0344570 | 0.806668 | 7.357320e-50 | -8.615850e-47 |
| Msa0230740 | Msa0363070 | 0.816829 | 4.519843e-52 | -8.615850e-47 |
| Msa0230740 | Msa0385390 | 0.803724 | 3.041063e-49 | -8.615850e-47 |
| Msa0230740 | Msa0392420 | 0.841287 | 5.205660e-58 | -8.615850e-47 |
| Msa0230740 | Msa0392460 | 0.829723 | 4.387802e-55 | -8.615850e-47 |
| Msa0230740 | Msa0392490 | 0.829148 | 6.054355e-55 | -8.615850e-47 |
| Msa0230740 | Msa0392510 | 0.804913 | 1.719554e-49 | -8.615850e-47 |
| Msa0230740 | Msa0415320 | 0.830557 | 2.745564e-55 | -8.615850e-47 |
| Msa0230740 | Msa0419700 | 0.805509 | 1.289683e-49 | -8.615850e-47 |
| Msa0230740 | Msa0487570 | 0.840475 | 8.502067e-58 | -8.615850e-47 |
| Msa0230740 | Msa0487630 | 0.838852 | 2.248355e-57 | -8.615850e-47 |
| Msa0230740 | Msa0523000 | 0.820920 | 5.314585e-53 | -8.615850e-47 |
| Msa0230740 | Msa0534930 | 0.820735 | 5.863550e-53 | -8.615850e-47 |
| Msa0230740 | Msa0535040 | 0.840690 | 7.468663e-58 | -8.615850e-47 |
| Msa0230740 | Msa0546500 | 0.812576 | 3.954970e-51 | -8.615850e-47 |
| Msa0230740 | Msa0580370 | 0.805173 | 1.516671e-49 | -8.615850e-47 |
| Msa0230740 | Msa0591790 | 0.813932 | 1.992477e-51 | -8.615850e-47 |
| Msa0230740 | Msa0626510 | 0.811368 | 7.250673e-51 | -8.615850e-47 |
| Msa0230740 | Msa0637560 | 0.803622 | 3.192165e-49 | -8.615850e-47 |
| Msa0230740 | Msa0637580 | 0.802604 | 5.185103e-49 | -8.615850e-47 |
| Msa0230740 | Msa0662240 | 0.815158 | 1.066919e-51 | -8.615850e-47 |
| Msa0230740 | Msa0739730 | 0.820539 | 6.504188e-53 | -8.615850e-47 |
| Msa0230740 | Msa0741240 | 0.802761 | 4.812321e-49 | -8.615850e-47 |
| Msa0230740 | Msa0769180 | 0.834608 | 2.716350e-56 | -8.615850e-47 |
| Msa0230740 | Msa0785250 | 0.828985 | 6.629308e-55 | -8.615850e-47 |
| Msa0230740 | Msa0795870 | 0.800851 | 1.187070e-48 | -8.615850e-47 |
| Msa0230740 | Msa0816150 | 0.832118 | 1.134679e-55 | -8.615850e-47 |
| Msa0230740 | Msa0824840 | 0.804724 | 1.883243e-49 | -8.615850e-47 |
| Msa0230740 | Msa0828560 | 0.801213 | 1.001195e-48 | -8.615850e-47 |
| Msa0230740 | Msa0833650 | 0.802980 | 4.336296e-49 | -8.615850e-47 |
| Msa0230740 | Msa0858840 | 0.800605 | 1.332814e-48 | -8.615850e-47 |
| Msa0230740 | Msa0861870 | 0.806139 | 9.512211e-50 | -8.615850e-47 |
| Msa0230740 | Msa0876560 | 0.809135 | 2.197597e-50 | -8.615850e-47 |
| Msa0230740 | Msa0880140 | 0.832252 | 1.051307e-55 | -8.615850e-47 |
| Msa0230740 | Msa0890320 | 0.825661 | 4.151649e-54 | -8.615850e-47 |
| Msa0230740 | Msa0896540 | 0.805956 | 1.039298e-49 | -8.615850e-47 |
| Msa0230740 | Msa0925180 | 0.847345 | 1.226108e-59 | -8.615850e-47 |
| Msa0230740 | Msa0936410 | 0.800109 | 1.681152e-48 | -8.615850e-47 |
| Msa0230740 | Msa0941820 | 0.814968 | 1.175574e-51 | -8.615850e-47 |
| Msa0230740 | Msa0948290 | 0.824786 | 6.683167e-54 | -8.615850e-47 |
| Msa0230740 | Msa0964840 | 0.818176 | 2.246844e-52 | -8.615850e-47 |
| Msa0230740 | Msa0967380 | 0.826217 | 3.062504e-54 | -8.615850e-47 |
| Msa0230740 | Msa0967870 | 0.800346 | 1.504491e-48 | -8.615850e-47 |
| Msa0230740 | Msa0972670 | 0.803922 | 2.766535e-49 | -8.615850e-47 |
| Msa0230740 | Msa0990540 | 0.831663 | 1.468907e-55 | -8.615850e-47 |
| Msa0230740 | Msa1019430 | 0.833942 | 3.989841e-56 | -8.615850e-47 |
| Msa0230740 | Msa1019470 | 0.831885 | 1.295338e-55 | -8.615850e-47 |
| Msa0230740 | Msa1045140 | 0.818821 | 1.604858e-52 | -8.615850e-47 |
| Msa0230740 | Msa1076510 | 0.802706 | 4.940160e-49 | -8.615850e-47 |
| Msa0230740 | Msa1117920 | 0.801314 | 9.547491e-49 | -8.615850e-47 |
| Msa0230740 | Msa1132840 | 0.803821 | 2.903447e-49 | -8.615850e-47 |
| Msa0230740 | Msa1140210 | 0.811301 | 7.497770e-51 | -8.615850e-47 |
| Msa0230740 | Msa1161680 | 0.818034 | 2.418960e-52 | -8.615850e-47 |
| Msa0230740 | Msa1177320 | 0.806670 | 7.348397e-50 | -8.615850e-47 |
| Msa0230740 | Msa1190400 | 0.802984 | 4.328063e-49 | -8.615850e-47 |
| Msa0230740 | Msa1209460 | 0.807227 | 5.603970e-50 | -8.615850e-47 |
| Msa0230740 | Msa1228190 | 0.846106 | 2.674839e-59 | -8.615850e-47 |
| Msa0230740 | Msa1271260 | 0.803339 | 3.655383e-49 | -8.615850e-47 |
| Msa0230740 | Msa1326630 | 0.808153 | 3.562433e-50 | -8.615850e-47 |
| Msa0230740 | Msa1346280 | 0.814202 | 1.737568e-51 | -8.615850e-47 |
| Msa0230740 | Msa1372230 | 0.838720 | 2.431756e-57 | -8.615850e-47 |
| Msa0230740 | Msa1374550 | 0.842800 | 2.073014e-58 | -8.615850e-47 |
| Msa0230740 | Msa1438250 | 0.846467 | 2.133289e-59 | -8.615850e-47 |
| Msa0230740 | Msa1465440 | 0.808821 | 2.565553e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0230740 | MtrunA17_Chr2g0300181 | 86.755 | 151 | 19 | 1 | 4 | 153 | 170 | 320 | 6.44e-94 | 275 |
| Msa0230740 | MtrunA17_Chr2g0300141 | 62.162 | 148 | 56 | 0 | 4 | 151 | 168 | 315 | 2.11e-59 | 187 |
| Msa0230740 | MtrunA17_Chr2g0300081 | 62.162 | 148 | 56 | 0 | 4 | 151 | 170 | 317 | 1.08e-58 | 186 |
| Msa0230740 | MtrunA17_Chr2g0300051 | 59.459 | 148 | 59 | 1 | 4 | 151 | 165 | 311 | 6.01e-53 | 171 |
| Msa0230740 | MtrunA17_Chr2g0300101 | 56.081 | 148 | 64 | 1 | 4 | 151 | 168 | 314 | 2.14e-50 | 164 |
| Msa0230740 | MtrunA17_Chr2g0300171 | 59.091 | 132 | 54 | 0 | 20 | 151 | 1 | 132 | 4.24e-50 | 157 |
| Msa0230740 | MtrunA17_Chr1g0202241 | 45.865 | 133 | 66 | 2 | 5 | 136 | 169 | 296 | 4.04e-35 | 124 |
| Msa0230740 | MtrunA17_Chr1g0202231 | 47.656 | 128 | 63 | 2 | 5 | 132 | 171 | 294 | 8.92e-34 | 121 |
| Msa0230740 | MtrunA17_Chr1g0202261 | 46.875 | 128 | 63 | 3 | 5 | 132 | 171 | 293 | 1.59e-30 | 112 |
| Msa0230740 | MtrunA17_Chr7g0275231 | 40.146 | 137 | 78 | 3 | 1 | 136 | 170 | 303 | 1.60e-25 | 99.4 |
| Msa0230740 | MtrunA17_Chr5g0418461 | 39.695 | 131 | 71 | 4 | 8 | 136 | 170 | 294 | 1.80e-25 | 99.0 |
| Msa0230740 | MtrunA17_Chr7g0240891 | 38.971 | 136 | 75 | 4 | 3 | 136 | 169 | 298 | 2.77e-25 | 98.6 |
| Msa0230740 | MtrunA17_Chr7g0274861 | 37.313 | 134 | 76 | 4 | 5 | 136 | 148 | 275 | 5.33e-24 | 94.7 |
| Msa0230740 | MtrunA17_Chr8g0361941 | 39.552 | 134 | 77 | 3 | 3 | 136 | 169 | 298 | 3.69e-23 | 92.8 |
| Msa0230740 | MtrunA17_Chr1g0202281 | 38.525 | 122 | 71 | 3 | 11 | 132 | 189 | 306 | 4.60e-22 | 90.1 |
| Msa0230740 | MtrunA17_Chr2g0331781 | 37.594 | 133 | 75 | 4 | 2 | 132 | 183 | 309 | 5.02e-21 | 87.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0230740 | AT5G24090.1 | 41.600 | 125 | 69 | 3 | 8 | 132 | 178 | 298 | 3.56e-25 | 98.6 |
Find 19 sgRNAs with CRISPR-Local
Find 228 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTATGGAGGAATTGTGATTT+GGG | 0.311164 | 2_2:-2926760 | Msa0230740:CDS |
| ACTATGGAGGAATTGTGATT+TGG | 0.332298 | 2_2:-2926761 | Msa0230740:CDS |
| TTGGACGTGGTTAGTTCAAC+TGG | 0.354241 | 2_2:-2926898 | Msa0230740:CDS |
| TTGCACGATCAAGGAATTCT+TGG | 0.356971 | 2_2:-2926917 | Msa0230740:CDS |
| CTTGACAAAGCTATCAAAAC+TGG | 0.381379 | 2_2:-2927020 | Msa0230740:CDS |
| ATAACAAAGCTAATTTAATT+CGG | 0.388147 | 2_2:+2926602 | None:intergenic |
| GCTTTGTCAAGGTACTGATC+TGG | 0.481492 | 2_2:+2927032 | None:intergenic |
| ATACATTGCTTGCACGATCA+AGG | 0.483316 | 2_2:-2926926 | Msa0230740:CDS |
| CTGATCTGGAATAATACATT+GGG | 0.492176 | 2_2:+2927046 | None:intergenic |
| TGTGGTATGTAACCACTACT+AGG | 0.505291 | 2_2:+2926831 | None:intergenic |
| ACTGATCTGGAATAATACAT+TGG | 0.537010 | 2_2:+2927045 | None:intergenic |
| TCGTGCAAGCAATGTATCAT+TGG | 0.540494 | 2_2:+2926932 | None:intergenic |
| TTTCAATCTTATAACTATGG+AGG | 0.547146 | 2_2:-2926774 | Msa0230740:CDS |
| GCAATAGAAAAGGTTTGTCT+CGG | 0.580829 | 2_2:-2926645 | Msa0230740:CDS |
| GCTACTGCAGCTCCTAGTAG+TGG | 0.609914 | 2_2:-2926843 | Msa0230740:CDS |
| GATCAAGGAATTCTTGGACG+TGG | 0.637226 | 2_2:-2926911 | Msa0230740:CDS |
| AAATAGACGAGCATGTTAAG+CGG | 0.653426 | 2_2:-2926701 | Msa0230740:CDS |
| TGACAAAGAGAAGAACGAAG+AGG | 0.663527 | 2_2:-2928107 | Msa0230740:intron |
| TTAGATATGAGATAATCTTG+TGG | 0.695616 | 2_2:+2926813 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATAAATAAATAACATG+CGG | - | chr2_2:2927479-2927498 | Msa0230740:intron | 10.0% |
| !! | TAACTAATTATATCTATTAT+AGG | - | chr2_2:2927628-2927647 | Msa0230740:intron | 10.0% |
| !! | AAAAATAAATAAATAACATG+CGG | - | chr2_2:2927479-2927498 | Msa0230740:intron | 10.0% |
| !! | TAACTAATTATATCTATTAT+AGG | - | chr2_2:2927628-2927647 | Msa0230740:intron | 10.0% |
| !!! | TATGAACATGTATAAATTTT+TGG | + | chr2_2:2927332-2927351 | None:intergenic | 15.0% |
| !!! | TTAGTATTATGTTTTTTTGA+TGG | - | chr2_2:2927554-2927573 | Msa0230740:intron | 15.0% |
| !!! | ATTTTTCAATCTTATAACTA+TGG | - | chr2_2:2927942-2927961 | Msa0230740:intron | 15.0% |
| !!! | TATGAACATGTATAAATTTT+TGG | + | chr2_2:2927332-2927351 | None:intergenic | 15.0% |
| !!! | TTAGTATTATGTTTTTTTGA+TGG | - | chr2_2:2927554-2927573 | Msa0230740:intron | 15.0% |
| !!! | ATTTTTCAATCTTATAACTA+TGG | - | chr2_2:2927942-2927961 | Msa0230740:intron | 15.0% |
| !! | ATTATATTCTCAAGTAGTAT+TGG | - | chr2_2:2927073-2927092 | Msa0230740:intron | 20.0% |
| !! | TTATATTCTCAAGTAGTATT+GGG | - | chr2_2:2927074-2927093 | Msa0230740:intron | 20.0% |
| !! | AGACAAGTAAAATAAATACA+AGG | + | chr2_2:2927100-2927119 | None:intergenic | 20.0% |
| !!! | TTATTTTACTTGTCTTTGTA+AGG | - | chr2_2:2927105-2927124 | Msa0230740:intron | 20.0% |
| !!! | TTCGATCATATTGAATTTTA+GGG | + | chr2_2:2927761-2927780 | None:intergenic | 20.0% |
| !!! | ATTCGATCATATTGAATTTT+AGG | + | chr2_2:2927762-2927781 | None:intergenic | 20.0% |
| !! | TTATAAGATTGAAAAATGTG+AGG | + | chr2_2:2927939-2927958 | None:intergenic | 20.0% |
| !! | ATTATATTCTCAAGTAGTAT+TGG | - | chr2_2:2927073-2927092 | Msa0230740:intron | 20.0% |
| !! | TTATATTCTCAAGTAGTATT+GGG | - | chr2_2:2927074-2927093 | Msa0230740:intron | 20.0% |
| !! | AGACAAGTAAAATAAATACA+AGG | + | chr2_2:2927100-2927119 | None:intergenic | 20.0% |
| !!! | TTATTTTACTTGTCTTTGTA+AGG | - | chr2_2:2927105-2927124 | Msa0230740:intron | 20.0% |
| !!! | TTCGATCATATTGAATTTTA+GGG | + | chr2_2:2927761-2927780 | None:intergenic | 20.0% |
| !!! | ATTCGATCATATTGAATTTT+AGG | + | chr2_2:2927762-2927781 | None:intergenic | 20.0% |
| !! | TTATAAGATTGAAAAATGTG+AGG | + | chr2_2:2927939-2927958 | None:intergenic | 20.0% |
| ! | TTAGACCTATTACAACTTAT+GGG | + | chr2_2:2927151-2927170 | None:intergenic | 25.0% |
| ! | TTTAGACCTATTACAACTTA+TGG | + | chr2_2:2927152-2927171 | None:intergenic | 25.0% |
| ! | TATTTCCTTTCTTTGTTCTT+TGG | - | chr2_2:2927259-2927278 | Msa0230740:intron | 25.0% |
| !!! | AAATTTTTGGATCTATCTGA+TGG | + | chr2_2:2927319-2927338 | None:intergenic | 25.0% |
| ! | CTCATATTAAGTCTTAGATT+TGG | + | chr2_2:2927517-2927536 | None:intergenic | 25.0% |
| !! | ACTGGATAATAAAGTTTTCA+TGG | - | chr2_2:2927839-2927858 | Msa0230740:intron | 25.0% |
| !! | CTGGATAATAAAGTTTTCAT+GGG | - | chr2_2:2927840-2927859 | Msa0230740:intron | 25.0% |
| ! | TTAGATATGAGATAATCTTG+TGG | + | chr2_2:2927909-2927928 | None:intergenic | 25.0% |
| ! | TTTCAATCTTATAACTATGG+AGG | - | chr2_2:2927945-2927964 | Msa0230740:intron | 25.0% |
| !! | TGTAACTATTTTCATCATCA+TGG | + | chr2_2:2927992-2928011 | None:intergenic | 25.0% |
| ! | TTAGACCTATTACAACTTAT+GGG | + | chr2_2:2927151-2927170 | None:intergenic | 25.0% |
| ! | TTTAGACCTATTACAACTTA+TGG | + | chr2_2:2927152-2927171 | None:intergenic | 25.0% |
| ! | TATTTCCTTTCTTTGTTCTT+TGG | - | chr2_2:2927259-2927278 | Msa0230740:intron | 25.0% |
| !!! | AAATTTTTGGATCTATCTGA+TGG | + | chr2_2:2927319-2927338 | None:intergenic | 25.0% |
| ! | CTCATATTAAGTCTTAGATT+TGG | + | chr2_2:2927517-2927536 | None:intergenic | 25.0% |
| !! | ACTGGATAATAAAGTTTTCA+TGG | - | chr2_2:2927839-2927858 | Msa0230740:intron | 25.0% |
| !! | CTGGATAATAAAGTTTTCAT+GGG | - | chr2_2:2927840-2927859 | Msa0230740:intron | 25.0% |
| ! | TTAGATATGAGATAATCTTG+TGG | + | chr2_2:2927909-2927928 | None:intergenic | 25.0% |
| ! | TTTCAATCTTATAACTATGG+AGG | - | chr2_2:2927945-2927964 | Msa0230740:intron | 25.0% |
| !! | TGTAACTATTTTCATCATCA+TGG | + | chr2_2:2927992-2928011 | None:intergenic | 25.0% |
| TGAATGCTATCAATACTATC+CGG | + | chr2_2:2927003-2927022 | None:intergenic | 30.0% | |
| ATATAATTCTTAGTCCATGC+TGG | + | chr2_2:2927060-2927079 | None:intergenic | 30.0% | |
| ACTATAATCGTACTTTAACG+CGG | + | chr2_2:2927369-2927388 | None:intergenic | 30.0% | |
| AAGACTTAATATGAGACAAG+AGG | - | chr2_2:2927522-2927541 | Msa0230740:intron | 30.0% | |
| ! | CTGATCTGGAATAATACATT+GGG | + | chr2_2:2927676-2927695 | None:intergenic | 30.0% |
| ! | ACTGATCTGGAATAATACAT+TGG | + | chr2_2:2927677-2927696 | None:intergenic | 30.0% |
| !! | AGTTTTCAAGGCAATAGAAA+AGG | - | chr2_2:2928064-2928083 | Msa0230740:intron | 30.0% |
| TGAATGCTATCAATACTATC+CGG | + | chr2_2:2927003-2927022 | None:intergenic | 30.0% | |
| ATATAATTCTTAGTCCATGC+TGG | + | chr2_2:2927060-2927079 | None:intergenic | 30.0% | |
| ACTATAATCGTACTTTAACG+CGG | + | chr2_2:2927369-2927388 | None:intergenic | 30.0% | |
| AAGACTTAATATGAGACAAG+AGG | - | chr2_2:2927522-2927541 | Msa0230740:intron | 30.0% | |
| ! | CTGATCTGGAATAATACATT+GGG | + | chr2_2:2927676-2927695 | None:intergenic | 30.0% |
| ! | ACTGATCTGGAATAATACAT+TGG | + | chr2_2:2927677-2927696 | None:intergenic | 30.0% |
| !! | AGTTTTCAAGGCAATAGAAA+AGG | - | chr2_2:2928064-2928083 | Msa0230740:intron | 30.0% |
| TGAGAGTCATTTGTGTTTGA+TGG | + | chr2_2:2926673-2926692 | None:intergenic | 35.0% | |
| TTAATGGGAAAATGATCACG+TGG | + | chr2_2:2926757-2926776 | None:intergenic | 35.0% | |
| ! | GATCATTTTCCCATTAACCA+AGG | - | chr2_2:2926760-2926779 | Msa0230740:CDS | 35.0% |
| AAGGAATTCTTTACAGCTAG+TGG | + | chr2_2:2926811-2926830 | None:intergenic | 35.0% | |
| !! | GAGATTTGTTGTGGGAAATA+GGG | + | chr2_2:2926861-2926880 | None:intergenic | 35.0% |
| !! | TGAGATTTGTTGTGGGAAAT+AGG | + | chr2_2:2926862-2926881 | None:intergenic | 35.0% |
| ! | CACTAGCTCTTTAAATAGCT+AGG | + | chr2_2:2927183-2927202 | None:intergenic | 35.0% |
| ! | AGATTTGTTCATAGCCTTCA+AGG | + | chr2_2:2927211-2927230 | None:intergenic | 35.0% |
| CTATGCCAAAGAACAAAGAA+AGG | + | chr2_2:2927267-2927286 | None:intergenic | 35.0% | |
| !! | TCTATCTGATGGATTTGAGT+AGG | + | chr2_2:2927308-2927327 | None:intergenic | 35.0% |
| !!! | CAGTTTTGATAGCTTTGTCA+AGG | + | chr2_2:2927701-2927720 | None:intergenic | 35.0% |
| CTTGACAAAGCTATCAAAAC+TGG | - | chr2_2:2927699-2927718 | Msa0230740:intron | 35.0% | |
| ! | AAAGTTTTCATGGGACTTCT+AGG | - | chr2_2:2927849-2927868 | Msa0230740:intron | 35.0% |
| ACTATGGAGGAATTGTGATT+TGG | - | chr2_2:2927958-2927977 | Msa0230740:intron | 35.0% | |
| CTATGGAGGAATTGTGATTT+GGG | - | chr2_2:2927959-2927978 | Msa0230740:intron | 35.0% | |
| AAATAGACGAGCATGTTAAG+CGG | - | chr2_2:2928018-2928037 | Msa0230740:intron | 35.0% | |
| ! | ATTTGTGACGCAAGTTTTCA+AGG | - | chr2_2:2928052-2928071 | Msa0230740:intron | 35.0% |
| GCAATAGAAAAGGTTTGTCT+CGG | - | chr2_2:2928074-2928093 | Msa0230740:intron | 35.0% | |
| TGAGAGTCATTTGTGTTTGA+TGG | + | chr2_2:2926673-2926692 | None:intergenic | 35.0% | |
| TTAATGGGAAAATGATCACG+TGG | + | chr2_2:2926757-2926776 | None:intergenic | 35.0% | |
| ! | GATCATTTTCCCATTAACCA+AGG | - | chr2_2:2926760-2926779 | Msa0230740:CDS | 35.0% |
| AAGGAATTCTTTACAGCTAG+TGG | + | chr2_2:2926811-2926830 | None:intergenic | 35.0% | |
| !! | GAGATTTGTTGTGGGAAATA+GGG | + | chr2_2:2926861-2926880 | None:intergenic | 35.0% |
| !! | TGAGATTTGTTGTGGGAAAT+AGG | + | chr2_2:2926862-2926881 | None:intergenic | 35.0% |
| ! | CACTAGCTCTTTAAATAGCT+AGG | + | chr2_2:2927183-2927202 | None:intergenic | 35.0% |
| ! | AGATTTGTTCATAGCCTTCA+AGG | + | chr2_2:2927211-2927230 | None:intergenic | 35.0% |
| CTATGCCAAAGAACAAAGAA+AGG | + | chr2_2:2927267-2927286 | None:intergenic | 35.0% | |
| !! | TCTATCTGATGGATTTGAGT+AGG | + | chr2_2:2927308-2927327 | None:intergenic | 35.0% |
| !!! | CAGTTTTGATAGCTTTGTCA+AGG | + | chr2_2:2927701-2927720 | None:intergenic | 35.0% |
| CTTGACAAAGCTATCAAAAC+TGG | - | chr2_2:2927699-2927718 | Msa0230740:intron | 35.0% | |
| ! | AAAGTTTTCATGGGACTTCT+AGG | - | chr2_2:2927849-2927868 | Msa0230740:intron | 35.0% |
| ACTATGGAGGAATTGTGATT+TGG | - | chr2_2:2927958-2927977 | Msa0230740:intron | 35.0% | |
| CTATGGAGGAATTGTGATTT+GGG | - | chr2_2:2927959-2927978 | Msa0230740:intron | 35.0% | |
| AAATAGACGAGCATGTTAAG+CGG | - | chr2_2:2928018-2928037 | Msa0230740:intron | 35.0% | |
| ! | ATTTGTGACGCAAGTTTTCA+AGG | - | chr2_2:2928052-2928071 | Msa0230740:intron | 35.0% |
| GCAATAGAAAAGGTTTGTCT+CGG | - | chr2_2:2928074-2928093 | Msa0230740:intron | 35.0% | |
| TGACAAAGAGAAGAACGAAG+AGG | - | chr2_2:2926612-2926631 | Msa0230740:CDS | 40.0% | |
| ACTTGTGTTTCACCTTCCTT+TGG | + | chr2_2:2926646-2926665 | None:intergenic | 40.0% | |
| TTGTGGGGTTAAAGTGGTAT+GGG | + | chr2_2:2926722-2926741 | None:intergenic | 40.0% | |
| GGAGATAAGCCTTGGTTAAT+GGG | + | chr2_2:2926772-2926791 | None:intergenic | 40.0% | |
| TGGAGATAAGCCTTGGTTAA+TGG | + | chr2_2:2926773-2926792 | None:intergenic | 40.0% | |
| TTGTGGGAAATAGGGACATT+GGG | + | chr2_2:2926853-2926872 | None:intergenic | 40.0% | |
| !! | GAGTGGTTGAGATTTGTTGT+GGG | + | chr2_2:2926869-2926888 | None:intergenic | 40.0% |
| !! | TGAGTGGTTGAGATTTGTTG+TGG | + | chr2_2:2926870-2926889 | None:intergenic | 40.0% |
| !! | AGTCCATGCTGGCTTAATTA+TGG | + | chr2_2:2927049-2927068 | None:intergenic | 40.0% |
| CTATTACAACTTATGGGCCT+GGG | + | chr2_2:2927145-2927164 | None:intergenic | 40.0% | |
| TTTGTTCATAGCCTTCAAGG+AGG | + | chr2_2:2927208-2927227 | None:intergenic | 40.0% | |
| TCGTGCAAGCAATGTATCAT+TGG | + | chr2_2:2927790-2927809 | None:intergenic | 40.0% | |
| ATACATTGCTTGCACGATCA+AGG | - | chr2_2:2927793-2927812 | Msa0230740:intron | 40.0% | |
| TTGCACGATCAAGGAATTCT+TGG | - | chr2_2:2927802-2927821 | Msa0230740:intron | 40.0% | |
| TGTGGTATGTAACCACTACT+AGG | + | chr2_2:2927891-2927910 | None:intergenic | 40.0% | |
| TGACAAAGAGAAGAACGAAG+AGG | - | chr2_2:2926612-2926631 | Msa0230740:CDS | 40.0% | |
| ACTTGTGTTTCACCTTCCTT+TGG | + | chr2_2:2926646-2926665 | None:intergenic | 40.0% | |
| TTGTGGGGTTAAAGTGGTAT+GGG | + | chr2_2:2926722-2926741 | None:intergenic | 40.0% | |
| GGAGATAAGCCTTGGTTAAT+GGG | + | chr2_2:2926772-2926791 | None:intergenic | 40.0% | |
| TGGAGATAAGCCTTGGTTAA+TGG | + | chr2_2:2926773-2926792 | None:intergenic | 40.0% | |
| TTGTGGGAAATAGGGACATT+GGG | + | chr2_2:2926853-2926872 | None:intergenic | 40.0% | |
| !! | GAGTGGTTGAGATTTGTTGT+GGG | + | chr2_2:2926869-2926888 | None:intergenic | 40.0% |
| !! | TGAGTGGTTGAGATTTGTTG+TGG | + | chr2_2:2926870-2926889 | None:intergenic | 40.0% |
| !! | AGTCCATGCTGGCTTAATTA+TGG | + | chr2_2:2927049-2927068 | None:intergenic | 40.0% |
| CTATTACAACTTATGGGCCT+GGG | + | chr2_2:2927145-2927164 | None:intergenic | 40.0% | |
| TTTGTTCATAGCCTTCAAGG+AGG | + | chr2_2:2927208-2927227 | None:intergenic | 40.0% | |
| TCGTGCAAGCAATGTATCAT+TGG | + | chr2_2:2927790-2927809 | None:intergenic | 40.0% | |
| ATACATTGCTTGCACGATCA+AGG | - | chr2_2:2927793-2927812 | Msa0230740:intron | 40.0% | |
| TTGCACGATCAAGGAATTCT+TGG | - | chr2_2:2927802-2927821 | Msa0230740:intron | 40.0% | |
| TGTGGTATGTAACCACTACT+AGG | + | chr2_2:2927891-2927910 | None:intergenic | 40.0% | |
| CGAAGAGGTCTCTAAACCAA+AGG | - | chr2_2:2926627-2926646 | Msa0230740:CDS | 45.0% | |
| GAGGTCTCTAAACCAAAGGA+AGG | - | chr2_2:2926631-2926650 | Msa0230740:CDS | 45.0% | |
| CCACAACGTCTTCAGAAAGT+GGG | + | chr2_2:2926696-2926715 | None:intergenic | 45.0% | |
| ACCACAACGTCTTCAGAAAG+TGG | + | chr2_2:2926697-2926716 | None:intergenic | 45.0% | |
| GTTGTGGGGTTAAAGTGGTA+TGG | + | chr2_2:2926723-2926742 | None:intergenic | 45.0% | |
| TGATCACGTGGTGTAGAGTT+GGG | + | chr2_2:2926745-2926764 | None:intergenic | 45.0% | |
| ATGATCACGTGGTGTAGAGT+TGG | + | chr2_2:2926746-2926765 | None:intergenic | 45.0% | |
| ACAAGTGGGTGAGAGTTTCA+AGG | + | chr2_2:2926830-2926849 | None:intergenic | 45.0% | |
| ATAGGGACATTGGGACAAGT+GGG | + | chr2_2:2926844-2926863 | None:intergenic | 45.0% | |
| AATAGGGACATTGGGACAAG+TGG | + | chr2_2:2926845-2926864 | None:intergenic | 45.0% | |
| GTTGTGGGAAATAGGGACAT+TGG | + | chr2_2:2926854-2926873 | None:intergenic | 45.0% | |
| GTGGTGGTAGTTGAATTGAG+TGG | + | chr2_2:2926886-2926905 | None:intergenic | 45.0% | |
| ACTCAGAGACTCATCTGGAT+GGG | + | chr2_2:2926914-2926933 | None:intergenic | 45.0% | |
| AGTCTCTGAGTCAGTCAAAG+AGG | - | chr2_2:2926923-2926942 | Msa0230740:CDS | 45.0% | |
| GTCTCTGAGTCAGTCAAAGA+GGG | - | chr2_2:2926924-2926943 | Msa0230740:CDS | 45.0% | |
| CTCAACCCAAACGTTTCTTC+TGG | - | chr2_2:2926976-2926995 | Msa0230740:CDS | 45.0% | |
| AGAACCCACAAAGACTCAAG+AGG | - | chr2_2:2927022-2927041 | Msa0230740:CDS | 45.0% | |
| GAACCCACAAAGACTCAAGA+GGG | - | chr2_2:2927023-2927042 | Msa0230740:CDS | 45.0% | |
| CCTATTACAACTTATGGGCC+TGG | + | chr2_2:2927146-2927165 | None:intergenic | 45.0% | |
| CCAGGCCCATAAGTTGTAAT+AGG | - | chr2_2:2927143-2927162 | Msa0230740:intron | 45.0% | |
| !! | GCTTTGTCAAGGTACTGATC+TGG | + | chr2_2:2927690-2927709 | None:intergenic | 45.0% |
| GATCAAGGAATTCTTGGACG+TGG | - | chr2_2:2927808-2927827 | Msa0230740:intron | 45.0% | |
| ! | TTGGACGTGGTTAGTTCAAC+TGG | - | chr2_2:2927821-2927840 | Msa0230740:intron | 45.0% |
| CGAAGAGGTCTCTAAACCAA+AGG | - | chr2_2:2926627-2926646 | Msa0230740:CDS | 45.0% | |
| GAGGTCTCTAAACCAAAGGA+AGG | - | chr2_2:2926631-2926650 | Msa0230740:CDS | 45.0% | |
| CCACAACGTCTTCAGAAAGT+GGG | + | chr2_2:2926696-2926715 | None:intergenic | 45.0% | |
| ACCACAACGTCTTCAGAAAG+TGG | + | chr2_2:2926697-2926716 | None:intergenic | 45.0% | |
| GTTGTGGGGTTAAAGTGGTA+TGG | + | chr2_2:2926723-2926742 | None:intergenic | 45.0% | |
| TGATCACGTGGTGTAGAGTT+GGG | + | chr2_2:2926745-2926764 | None:intergenic | 45.0% | |
| ATGATCACGTGGTGTAGAGT+TGG | + | chr2_2:2926746-2926765 | None:intergenic | 45.0% | |
| ACAAGTGGGTGAGAGTTTCA+AGG | + | chr2_2:2926830-2926849 | None:intergenic | 45.0% | |
| ATAGGGACATTGGGACAAGT+GGG | + | chr2_2:2926844-2926863 | None:intergenic | 45.0% | |
| AATAGGGACATTGGGACAAG+TGG | + | chr2_2:2926845-2926864 | None:intergenic | 45.0% | |
| GTTGTGGGAAATAGGGACAT+TGG | + | chr2_2:2926854-2926873 | None:intergenic | 45.0% | |
| GTGGTGGTAGTTGAATTGAG+TGG | + | chr2_2:2926886-2926905 | None:intergenic | 45.0% | |
| ACTCAGAGACTCATCTGGAT+GGG | + | chr2_2:2926914-2926933 | None:intergenic | 45.0% | |
| AGTCTCTGAGTCAGTCAAAG+AGG | - | chr2_2:2926923-2926942 | Msa0230740:CDS | 45.0% | |
| GTCTCTGAGTCAGTCAAAGA+GGG | - | chr2_2:2926924-2926943 | Msa0230740:CDS | 45.0% | |
| CTCAACCCAAACGTTTCTTC+TGG | - | chr2_2:2926976-2926995 | Msa0230740:CDS | 45.0% | |
| AGAACCCACAAAGACTCAAG+AGG | - | chr2_2:2927022-2927041 | Msa0230740:CDS | 45.0% | |
| GAACCCACAAAGACTCAAGA+GGG | - | chr2_2:2927023-2927042 | Msa0230740:CDS | 45.0% | |
| CCTATTACAACTTATGGGCC+TGG | + | chr2_2:2927146-2927165 | None:intergenic | 45.0% | |
| CCAGGCCCATAAGTTGTAAT+AGG | - | chr2_2:2927143-2927162 | Msa0230740:intron | 45.0% | |
| !! | GCTTTGTCAAGGTACTGATC+TGG | + | chr2_2:2927690-2927709 | None:intergenic | 45.0% |
| GATCAAGGAATTCTTGGACG+TGG | - | chr2_2:2927808-2927827 | Msa0230740:intron | 45.0% | |
| ! | TTGGACGTGGTTAGTTCAAC+TGG | - | chr2_2:2927821-2927840 | Msa0230740:intron | 45.0% |
| ! | CCCACTTTCTGAAGACGTTG+TGG | - | chr2_2:2926693-2926712 | Msa0230740:CDS | 50.0% |
| ! | GTTGGGTTGTGGGGTTAAAG+TGG | + | chr2_2:2926728-2926747 | None:intergenic | 50.0% |
| ! | TGGTGTAGAGTTGGGTTGTG+GGG | + | chr2_2:2926737-2926756 | None:intergenic | 50.0% |
| ! | GTGGTGTAGAGTTGGGTTGT+GGG | + | chr2_2:2926738-2926757 | None:intergenic | 50.0% |
| GCTAGTGGCAGATCATCTGA+CGG | + | chr2_2:2926796-2926815 | None:intergenic | 50.0% | |
| GACTCAGAGACTCATCTGGA+TGG | + | chr2_2:2926915-2926934 | None:intergenic | 50.0% | |
| ! | GACTGACTCAGAGACTCATC+TGG | + | chr2_2:2926919-2926938 | None:intergenic | 50.0% |
| CCGGTCCAGAAGAAACGTTT+GGG | + | chr2_2:2926984-2927003 | None:intergenic | 50.0% | |
| CCCAAACGTTTCTTCTGGAC+CGG | - | chr2_2:2926981-2927000 | Msa0230740:CDS | 50.0% | |
| TCCGGTCCAGAAGAAACGTT+TGG | + | chr2_2:2926985-2927004 | None:intergenic | 50.0% | |
| TGGCCCTCTTGAGTCTTTGT+GGG | + | chr2_2:2927029-2927048 | None:intergenic | 50.0% | |
| ATGGCCCTCTTGAGTCTTTG+TGG | + | chr2_2:2927030-2927049 | None:intergenic | 50.0% | |
| GGGCCATAATTAAGCCAGCA+TGG | - | chr2_2:2927043-2927062 | Msa0230740:CDS | 50.0% | |
| ! | CCCACTTTCTGAAGACGTTG+TGG | - | chr2_2:2926693-2926712 | Msa0230740:CDS | 50.0% |
| ! | GTTGGGTTGTGGGGTTAAAG+TGG | + | chr2_2:2926728-2926747 | None:intergenic | 50.0% |
| ! | TGGTGTAGAGTTGGGTTGTG+GGG | + | chr2_2:2926737-2926756 | None:intergenic | 50.0% |
| ! | GTGGTGTAGAGTTGGGTTGT+GGG | + | chr2_2:2926738-2926757 | None:intergenic | 50.0% |
| GCTAGTGGCAGATCATCTGA+CGG | + | chr2_2:2926796-2926815 | None:intergenic | 50.0% | |
| GACTCAGAGACTCATCTGGA+TGG | + | chr2_2:2926915-2926934 | None:intergenic | 50.0% | |
| ! | GACTGACTCAGAGACTCATC+TGG | + | chr2_2:2926919-2926938 | None:intergenic | 50.0% |
| CCGGTCCAGAAGAAACGTTT+GGG | + | chr2_2:2926984-2927003 | None:intergenic | 50.0% | |
| CCCAAACGTTTCTTCTGGAC+CGG | - | chr2_2:2926981-2927000 | Msa0230740:CDS | 50.0% | |
| TCCGGTCCAGAAGAAACGTT+TGG | + | chr2_2:2926985-2927004 | None:intergenic | 50.0% | |
| TGGCCCTCTTGAGTCTTTGT+GGG | + | chr2_2:2927029-2927048 | None:intergenic | 50.0% | |
| ATGGCCCTCTTGAGTCTTTG+TGG | + | chr2_2:2927030-2927049 | None:intergenic | 50.0% | |
| GGGCCATAATTAAGCCAGCA+TGG | - | chr2_2:2927043-2927062 | Msa0230740:CDS | 50.0% | |
| ! | CGTGGTGTAGAGTTGGGTTG+TGG | + | chr2_2:2926739-2926758 | None:intergenic | 55.0% |
| CTGACGGTGGAGATAAGCCT+TGG | + | chr2_2:2926780-2926799 | None:intergenic | 55.0% | |
| AGTGGCAGATCATCTGACGG+TGG | + | chr2_2:2926793-2926812 | None:intergenic | 55.0% | |
| ATCTGGATGGGTGAGTGTGG+TGG | + | chr2_2:2926902-2926921 | None:intergenic | 55.0% | |
| CTCATCTGGATGGGTGAGTG+TGG | + | chr2_2:2926905-2926924 | None:intergenic | 55.0% | |
| !! | TTTGGGTTGAGCGATCCAGC+GGG | + | chr2_2:2926967-2926986 | None:intergenic | 55.0% |
| !! | GTTTGGGTTGAGCGATCCAG+CGG | + | chr2_2:2926968-2926987 | None:intergenic | 55.0% |
| AGGACCTATCCATGTGACCC+AGG | - | chr2_2:2927125-2927144 | Msa0230740:intron | 55.0% | |
| ACTTATGGGCCTGGGTCACA+TGG | + | chr2_2:2927137-2927156 | None:intergenic | 55.0% | |
| GAGCTAGTGTGCCTCCTTGA+AGG | - | chr2_2:2927194-2927213 | Msa0230740:intron | 55.0% | |
| GCTACTGCAGCTCCTAGTAG+TGG | - | chr2_2:2927876-2927895 | Msa0230740:intron | 55.0% | |
| ! | CGTGGTGTAGAGTTGGGTTG+TGG | + | chr2_2:2926739-2926758 | None:intergenic | 55.0% |
| CTGACGGTGGAGATAAGCCT+TGG | + | chr2_2:2926780-2926799 | None:intergenic | 55.0% | |
| AGTGGCAGATCATCTGACGG+TGG | + | chr2_2:2926793-2926812 | None:intergenic | 55.0% | |
| ATCTGGATGGGTGAGTGTGG+TGG | + | chr2_2:2926902-2926921 | None:intergenic | 55.0% | |
| CTCATCTGGATGGGTGAGTG+TGG | + | chr2_2:2926905-2926924 | None:intergenic | 55.0% | |
| !! | TTTGGGTTGAGCGATCCAGC+GGG | + | chr2_2:2926967-2926986 | None:intergenic | 55.0% |
| !! | GTTTGGGTTGAGCGATCCAG+CGG | + | chr2_2:2926968-2926987 | None:intergenic | 55.0% |
| AGGACCTATCCATGTGACCC+AGG | - | chr2_2:2927125-2927144 | Msa0230740:intron | 55.0% | |
| ACTTATGGGCCTGGGTCACA+TGG | + | chr2_2:2927137-2927156 | None:intergenic | 55.0% | |
| GAGCTAGTGTGCCTCCTTGA+AGG | - | chr2_2:2927194-2927213 | Msa0230740:intron | 55.0% | |
| GCTACTGCAGCTCCTAGTAG+TGG | - | chr2_2:2927876-2927895 | Msa0230740:intron | 55.0% | |
| !! | TTGGGTTGAGCGATCCAGCG+GGG | + | chr2_2:2926966-2926985 | None:intergenic | 60.0% |
| TGGGCCTGGGTCACATGGAT+AGG | + | chr2_2:2927132-2927151 | None:intergenic | 60.0% | |
| !! | TTGGGTTGAGCGATCCAGCG+GGG | + | chr2_2:2926966-2926985 | None:intergenic | 60.0% |
| TGGGCCTGGGTCACATGGAT+AGG | + | chr2_2:2927132-2927151 | None:intergenic | 60.0% | |
| ATCCAGCGGGGGCAGTCGTA+TGG | + | chr2_2:2926954-2926973 | None:intergenic | 65.0% | |
| ! | TGGGTTGAGCGATCCAGCGG+GGG | + | chr2_2:2926965-2926984 | None:intergenic | 65.0% |
| ATCCAGCGGGGGCAGTCGTA+TGG | + | chr2_2:2926954-2926973 | None:intergenic | 65.0% | |
| ! | TGGGTTGAGCGATCCAGCGG+GGG | + | chr2_2:2926965-2926984 | None:intergenic | 65.0% |
| CACCATACGACTGCCCCCGC+TGG | - | chr2_2:2926949-2926968 | Msa0230740:CDS | 70.0% | |
| CACCATACGACTGCCCCCGC+TGG | - | chr2_2:2926949-2926968 | Msa0230740:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 2926611 | 2928130 | 2926611 | ID=Msa0230740;Name=Msa0230740 |
| chr2_2 | mRNA | 2926611 | 2928130 | 2926611 | ID=Msa0230740-mRNA-1;Parent=Msa0230740;Name=Msa0230740-mRNA-1;_AED=0.04;_eAED=0.12;_QI=0|0|0|0.5|1|1|2|0|167 |
| chr2_2 | exon | 2928108 | 2928130 | 2928108 | ID=Msa0230740-mRNA-1:exon:1053;Parent=Msa0230740-mRNA-1 |
| chr2_2 | exon | 2926611 | 2927091 | 2926611 | ID=Msa0230740-mRNA-1:exon:1052;Parent=Msa0230740-mRNA-1 |
| chr2_2 | CDS | 2928108 | 2928130 | 2928108 | ID=Msa0230740-mRNA-1:cds;Parent=Msa0230740-mRNA-1 |
| chr2_2 | CDS | 2926611 | 2927091 | 2926611 | ID=Msa0230740-mRNA-1:cds;Parent=Msa0230740-mRNA-1 |
| Gene Sequence |
| Protein sequence |
