Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0238860 | XP_013462892.1 | 96.532 | 173 | 6 | 0 | 1 | 173 | 1 | 173 | 1.19e-122 | 353 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0238860 | sp|Q94AU9|RBCX1_ARATH | 70.270 | 148 | 41 | 2 | 25 | 172 | 27 | 171 | 2.86e-71 | 215 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0238860 | A0A072V552 | 96.532 | 173 | 6 | 0 | 1 | 173 | 1 | 173 | 5.70e-123 | 353 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012380 | Msa0238860 | 0.876323 | 1.529771e-68 | -8.615850e-47 |
| Msa0014410 | Msa0238860 | 0.825944 | 3.555865e-54 | -8.615850e-47 |
| Msa0024900 | Msa0238860 | 0.802288 | 6.022308e-49 | -8.615850e-47 |
| Msa0034940 | Msa0238860 | 0.801406 | 9.139363e-49 | -8.615850e-47 |
| Msa0044180 | Msa0238860 | 0.842627 | 2.303614e-58 | -8.615850e-47 |
| Msa0064550 | Msa0238860 | 0.845174 | 4.786616e-59 | -8.615850e-47 |
| Msa0090860 | Msa0238860 | 0.802725 | 4.895116e-49 | -8.615850e-47 |
| Msa0108070 | Msa0238860 | 0.845861 | 3.118767e-59 | -8.615850e-47 |
| Msa0109490 | Msa0238860 | 0.813528 | 2.445190e-51 | -8.615850e-47 |
| Msa0140290 | Msa0238860 | 0.829904 | 3.965490e-55 | -8.615850e-47 |
| Msa0154220 | Msa0238860 | 0.837655 | 4.571820e-57 | -8.615850e-47 |
| Msa0154240 | Msa0238860 | 0.853354 | 2.526487e-61 | -8.615850e-47 |
| Msa0154270 | Msa0238860 | 0.872696 | 2.608709e-67 | -8.615850e-47 |
| Msa0183560 | Msa0238860 | 0.827497 | 1.514474e-54 | -8.615850e-47 |
| Msa0184510 | Msa0238860 | 0.809628 | 1.722083e-50 | -8.615850e-47 |
| Msa0187980 | Msa0238860 | 0.844498 | 7.285594e-59 | -8.615850e-47 |
| Msa0197030 | Msa0238860 | 0.939338 | 1.504688e-99 | -8.615850e-47 |
| Msa0199740 | Msa0238860 | 0.805469 | 1.314914e-49 | -8.615850e-47 |
| Msa0238860 | Msa0253160 | 0.827057 | 1.930313e-54 | -8.615850e-47 |
| Msa0238860 | Msa0260190 | 0.810938 | 8.986910e-51 | -8.615850e-47 |
| Msa0238860 | Msa0276590 | 0.941080 | 7.738058e-101 | -8.615850e-47 |
| Msa0238860 | Msa0291940 | 0.819389 | 1.191789e-52 | -8.615850e-47 |
| Msa0238860 | Msa0303440 | 0.803333 | 3.664726e-49 | -8.615850e-47 |
| Msa0238860 | Msa0316610 | 0.965999 | 2.446499e-125 | -8.615850e-47 |
| Msa0238860 | Msa0344680 | 0.913050 | 9.643114e-84 | -8.615850e-47 |
| Msa0238860 | Msa0346790 | 0.815683 | 8.153920e-52 | -8.615850e-47 |
| Msa0238860 | Msa0354390 | 0.804722 | 1.885130e-49 | -8.615850e-47 |
| Msa0238860 | Msa0382590 | 0.829656 | 4.555281e-55 | -8.615850e-47 |
| Msa0238860 | Msa0387970 | 0.879600 | 1.091536e-69 | -8.615850e-47 |
| Msa0238860 | Msa0392050 | 0.910378 | 2.002259e-82 | -8.615850e-47 |
| Msa0238860 | Msa0392540 | 0.861575 | 9.314739e-64 | -8.615850e-47 |
| Msa0238860 | Msa0401340 | 0.815452 | 9.180190e-52 | -8.615850e-47 |
| Msa0238860 | Msa0404060 | 0.846387 | 2.242582e-59 | -8.615850e-47 |
| Msa0238860 | Msa0404070 | 0.861563 | 9.395322e-64 | -8.615850e-47 |
| Msa0238860 | Msa0412190 | 0.821906 | 3.146872e-53 | -8.615850e-47 |
| Msa0238860 | Msa0425320 | 0.813341 | 2.688593e-51 | -8.615850e-47 |
| Msa0238860 | Msa0432720 | 0.840191 | 1.008621e-57 | -8.615850e-47 |
| Msa0238860 | Msa0437550 | 0.862941 | 3.546413e-64 | -8.615850e-47 |
| Msa0238860 | Msa0440310 | 0.858905 | 5.975702e-63 | -8.615850e-47 |
| Msa0238860 | Msa0448120 | 0.812557 | 3.992705e-51 | -8.615850e-47 |
| Msa0238860 | Msa0456760 | 0.806726 | 7.150594e-50 | -8.615850e-47 |
| Msa0238860 | Msa0463150 | 0.800566 | 1.357189e-48 | -8.615850e-47 |
| Msa0238860 | Msa0469950 | 0.911102 | 8.883121e-83 | -8.615850e-47 |
| Msa0238860 | Msa0471760 | 0.818169 | 2.255719e-52 | -8.615850e-47 |
| Msa0238860 | Msa0481490 | 0.808817 | 2.570868e-50 | -8.615850e-47 |
| Msa0238860 | Msa0487490 | 0.828099 | 1.085011e-54 | -8.615850e-47 |
| Msa0238860 | Msa0515460 | 0.816073 | 6.674315e-52 | -8.615850e-47 |
| Msa0238860 | Msa0525270 | 0.881655 | 2.003079e-70 | -8.615850e-47 |
| Msa0238860 | Msa0525280 | 0.880723 | 4.341183e-70 | -8.615850e-47 |
| Msa0238860 | Msa0530340 | 0.880410 | 5.615941e-70 | -8.615850e-47 |
| Msa0238860 | Msa0545230 | 0.824628 | 7.281311e-54 | -8.615850e-47 |
| Msa0238860 | Msa0546080 | 0.835272 | 1.848020e-56 | -8.615850e-47 |
| Msa0238860 | Msa0548210 | 0.892656 | 1.297656e-74 | -8.615850e-47 |
| Msa0238860 | Msa0549540 | 0.910050 | 2.886891e-82 | -8.615850e-47 |
| Msa0238860 | Msa0549760 | 0.826564 | 2.531464e-54 | -8.615850e-47 |
| Msa0238860 | Msa0556070 | 0.855838 | 4.821827e-62 | -8.615850e-47 |
| Msa0238860 | Msa0570680 | 0.832940 | 7.093716e-56 | -8.615850e-47 |
| Msa0238860 | Msa0577050 | 0.822927 | 1.822642e-53 | -8.615850e-47 |
| Msa0238860 | Msa0604880 | 0.883139 | 5.774852e-71 | -8.615850e-47 |
| Msa0238860 | Msa0605250 | 0.876832 | 1.020345e-68 | -8.615850e-47 |
| Msa0238860 | Msa0608780 | 0.809352 | 1.974159e-50 | -8.615850e-47 |
| Msa0238860 | Msa0609790 | 0.856689 | 2.714032e-62 | -8.615850e-47 |
| Msa0238860 | Msa0610780 | 0.821808 | 3.316539e-53 | -8.615850e-47 |
| Msa0238860 | Msa0610810 | 0.825953 | 3.538696e-54 | -8.615850e-47 |
| Msa0238860 | Msa0622250 | 0.863678 | 2.097178e-64 | -8.615850e-47 |
| Msa0238860 | Msa0624040 | 0.834436 | 3.001502e-56 | -8.615850e-47 |
| Msa0238860 | Msa0627050 | 0.888770 | 4.397737e-73 | -8.615850e-47 |
| Msa0238860 | Msa0636720 | 0.847449 | 1.148616e-59 | -8.615850e-47 |
| Msa0238860 | Msa0644630 | 0.868873 | 4.723976e-66 | -8.615850e-47 |
| Msa0238860 | Msa0646190 | 0.914484 | 1.815578e-84 | -8.615850e-47 |
| Msa0238860 | Msa0646340 | 0.821518 | 3.869899e-53 | -8.615850e-47 |
| Msa0238860 | Msa0649310 | 0.816714 | 4.796655e-52 | -8.615850e-47 |
| Msa0238860 | Msa0651310 | 0.858329 | 8.876203e-63 | -8.615850e-47 |
| Msa0238860 | Msa0675010 | 0.825261 | 5.161371e-54 | -8.615850e-47 |
| Msa0238860 | Msa0679780 | 0.802861 | 4.588848e-49 | -8.615850e-47 |
| Msa0238860 | Msa0681210 | 0.846141 | 2.617157e-59 | -8.615850e-47 |
| Msa0238860 | Msa0685890 | 0.843655 | 1.225813e-58 | -8.615850e-47 |
| Msa0238860 | Msa0693400 | 0.840020 | 1.117949e-57 | -8.615850e-47 |
| Msa0238860 | Msa0693500 | 0.836342 | 9.901560e-57 | -8.615850e-47 |
| Msa0238860 | Msa0705810 | 0.827205 | 1.778912e-54 | -8.615850e-47 |
| Msa0238860 | Msa0740210 | 0.813829 | 2.100036e-51 | -8.615850e-47 |
| Msa0238860 | Msa0742090 | 0.852329 | 4.959408e-61 | -8.615850e-47 |
| Msa0238860 | Msa0748330 | 0.855855 | 4.768300e-62 | -8.615850e-47 |
| Msa0238860 | Msa0749150 | 0.817525 | 3.152598e-52 | -8.615850e-47 |
| Msa0238860 | Msa0781390 | 0.824461 | 7.970940e-54 | -8.615850e-47 |
| Msa0238860 | Msa0786100 | 0.821314 | 4.312505e-53 | -8.615850e-47 |
| Msa0238860 | Msa0790640 | 0.823399 | 1.414356e-53 | -8.615850e-47 |
| Msa0238860 | Msa0792880 | 0.806762 | 7.028753e-50 | -8.615850e-47 |
| Msa0238860 | Msa0793100 | 0.835289 | 1.830091e-56 | -8.615850e-47 |
| Msa0238860 | Msa0803530 | 0.803949 | 2.730398e-49 | -8.615850e-47 |
| Msa0238860 | Msa0806720 | 0.824249 | 8.943504e-54 | -8.615850e-47 |
| Msa0238860 | Msa0806760 | 0.818887 | 1.550126e-52 | -8.615850e-47 |
| Msa0238860 | Msa0823310 | 0.832447 | 9.404851e-56 | -8.615850e-47 |
| Msa0238860 | Msa0828900 | 0.806012 | 1.011321e-49 | -8.615850e-47 |
| Msa0238860 | Msa0860920 | 0.815488 | 9.011342e-52 | -8.615850e-47 |
| Msa0238860 | Msa0879650 | 0.842639 | 2.287671e-58 | -8.615850e-47 |
| Msa0238860 | Msa0882700 | 0.804239 | 2.376320e-49 | -8.615850e-47 |
| Msa0238860 | Msa0887100 | 0.814813 | 1.272804e-51 | -8.615850e-47 |
| Msa0238860 | Msa0892020 | 0.806548 | 7.796156e-50 | -8.615850e-47 |
| Msa0238860 | Msa0909720 | 0.804195 | 2.427602e-49 | -8.615850e-47 |
| Msa0238860 | Msa0944690 | 0.845862 | 3.117090e-59 | -8.615850e-47 |
| Msa0238860 | Msa0945960 | 0.801096 | 1.057736e-48 | -8.615850e-47 |
| Msa0238860 | Msa0956910 | 0.808017 | 3.808129e-50 | -8.615850e-47 |
| Msa0238860 | Msa0984000 | 0.880092 | 7.296720e-70 | -8.615850e-47 |
| Msa0238860 | Msa1034930 | 0.813595 | 2.363580e-51 | -8.615850e-47 |
| Msa0238860 | Msa1082150 | 0.862021 | 6.804129e-64 | -8.615850e-47 |
| Msa0238860 | Msa1119570 | 0.810606 | 1.060355e-50 | -8.615850e-47 |
| Msa0238860 | Msa1137940 | 0.801803 | 7.579337e-49 | -8.615850e-47 |
| Msa0238860 | Msa1144730 | 0.911081 | 9.102479e-83 | -8.615850e-47 |
| Msa0238860 | Msa1158090 | 0.812543 | 4.021679e-51 | -8.615850e-47 |
| Msa0238860 | Msa1173380 | 0.889335 | 2.656001e-73 | -8.615850e-47 |
| Msa0238860 | Msa1180050 | 0.809153 | 2.178063e-50 | -8.615850e-47 |
| Msa0238860 | Msa1182800 | 0.826014 | 3.422454e-54 | -8.615850e-47 |
| Msa0238860 | Msa1184010 | 0.843288 | 1.536708e-58 | -8.615850e-47 |
| Msa0238860 | Msa1209160 | 0.813259 | 2.802676e-51 | -8.615850e-47 |
| Msa0238860 | Msa1228350 | 0.827936 | 1.187617e-54 | -8.615850e-47 |
| Msa0238860 | Msa1228460 | 0.817307 | 3.530159e-52 | -8.615850e-47 |
| Msa0238860 | Msa1236860 | 0.814900 | 1.217266e-51 | -8.615850e-47 |
| Msa0238860 | Msa1239900 | 0.819164 | 1.341208e-52 | -8.615850e-47 |
| Msa0238860 | Msa1255020 | 0.858917 | 5.924414e-63 | -8.615850e-47 |
| Msa0238860 | Msa1270770 | 0.806203 | 9.220050e-50 | -8.615850e-47 |
| Msa0238860 | Msa1281270 | 0.811917 | 5.508776e-51 | -8.615850e-47 |
| Msa0238860 | Msa1292960 | 0.812706 | 3.704169e-51 | -8.615850e-47 |
| Msa0238860 | Msa1295470 | 0.857657 | 1.405981e-62 | -8.615850e-47 |
| Msa0238860 | Msa1303760 | 0.804293 | 2.315590e-49 | -8.615850e-47 |
| Msa0238860 | Msa1317240 | 0.808502 | 3.000971e-50 | -8.615850e-47 |
| Msa0238860 | Msa1320380 | 0.817163 | 3.802270e-52 | -8.615850e-47 |
| Msa0238860 | Msa1349810 | 0.859218 | 4.815532e-63 | -8.615850e-47 |
| Msa0238860 | Msa1354090 | 0.840998 | 6.203150e-58 | -8.615850e-47 |
| Msa0238860 | Msa1358340 | 0.859765 | 3.297794e-63 | -8.615850e-47 |
| Msa0238860 | Msa1359890 | 0.915399 | 6.167698e-85 | -8.615850e-47 |
| Msa0238860 | Msa1369180 | 0.814897 | 1.219180e-51 | -8.615850e-47 |
| Msa0238860 | Msa1373390 | 0.802630 | 5.121093e-49 | -8.615850e-47 |
| Msa0238860 | Msa1375780 | 0.818767 | 1.650917e-52 | -8.615850e-47 |
| Msa0238860 | Msa1394900 | 0.817280 | 3.578529e-52 | -8.615850e-47 |
| Msa0238860 | Msa1404690 | 0.825118 | 5.581361e-54 | -8.615850e-47 |
| Msa0238860 | Msa1405380 | 0.826006 | 3.437367e-54 | -8.615850e-47 |
| Msa0238860 | Msa1406020 | 0.875092 | 4.046928e-68 | -8.615850e-47 |
| Msa0238860 | Msa1434660 | 0.868079 | 8.520392e-66 | -8.615850e-47 |
| Msa0238860 | Msa1456620 | 0.820850 | 5.515915e-53 | -8.615850e-47 |
| Msa0238860 | Msa1459540 | 0.831255 | 1.851577e-55 | -8.615850e-47 |
| Msa0238860 | Msa1466130 | -0.818839 | 1.590023e-52 | -8.615850e-47 |
| Msa0238860 | Msa1466350 | 0.826070 | 3.319600e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0238860 | MtrunA17_Chr2g0289141 | 96.532 | 173 | 6 | 0 | 1 | 173 | 1 | 173 | 1.10e-126 | 353 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0238860 | AT4G04330.1 | 70.270 | 148 | 41 | 2 | 25 | 172 | 27 | 171 | 2.90e-72 | 215 |
Find 48 sgRNAs with CRISPR-Local
Find 183 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATATTGATATGATGGAAAT+TGG | 0.226914 | 2_2:+12718115 | Msa0238860:three_prime_UTR |
| CAGATTTGTCCAACCACTTA+TGG | 0.272786 | 2_2:-12718227 | None:intergenic |
| CTCTTGCCAGCTGGCCAAAA+AGG | 0.282297 | 2_2:-12716977 | None:intergenic |
| TTGTTGGTGCATGGTGTAGC+TGG | 0.304472 | 2_2:-12716947 | None:intergenic |
| TGTCCCATTCAAAATCCTTT+TGG | 0.366494 | 2_2:-12717821 | None:intergenic |
| TGAAGCATATGTTGAGCTAA+TGG | 0.380963 | 2_2:+12717451 | Msa0238860:CDS |
| ACTCTAACACGAGGCTTATG+AGG | 0.410584 | 2_2:+12717991 | Msa0238860:CDS |
| ATTAGCTCAACATATGCTTC+AGG | 0.434378 | 2_2:-12717449 | None:intergenic |
| AAATCGAGTTAGACCATAAG+TGG | 0.434411 | 2_2:+12718214 | Msa0238860:three_prime_UTR |
| GAGCTCCTTCTCTTGCCAGC+TGG | 0.451237 | 2_2:-12716986 | None:intergenic |
| TTGAATAGCCCTACGCATAA+TGG | 0.455624 | 2_2:+12717692 | Msa0238860:intron |
| CTTCTCAGTTTCAGAACGAC+TGG | 0.465661 | 2_2:-12718030 | None:intergenic |
| ATCATATCAATATGTTGCAC+AGG | 0.488158 | 2_2:-12718106 | None:intergenic |
| AATTACAAACCTTAAAAGCT+AGG | 0.489206 | 2_2:-12717854 | None:intergenic |
| GAAAGGGCTTGCTTTGCTGC+AGG | 0.490075 | 2_2:-12718061 | None:intergenic |
| TGTGCAACATATTGATATGA+TGG | 0.490661 | 2_2:+12718108 | Msa0238860:three_prime_UTR |
| TTCGATCAATGGGAATGAAA+GGG | 0.495924 | 2_2:-12718077 | None:intergenic |
| GTTCGATCAATGGGAATGAA+AGG | 0.498668 | 2_2:-12718078 | None:intergenic |
| TGTTGAGCTAATGGAATTTG+TGG | 0.500110 | 2_2:+12717460 | Msa0238860:CDS |
| GGTGTAGCTGGGTAAACATA+AGG | 0.504704 | 2_2:-12716935 | None:intergenic |
| TACATAGCTCAGTGTTTGCA+TGG | 0.509009 | 2_2:+12718178 | Msa0238860:three_prime_UTR |
| ACTTGTCACCATCATCTAAC+GGG | 0.516413 | 2_2:-12717490 | None:intergenic |
| CATTTACCTCCATTATGCGT+AGG | 0.520633 | 2_2:-12717701 | None:intergenic |
| TGTTGGTGCATGGTGTAGCT+GGG | 0.521757 | 2_2:-12716946 | None:intergenic |
| TCATCAAGACATAAGAACTT+AGG | 0.525555 | 2_2:+12717536 | Msa0238860:CDS |
| TATGATGGAAATTGGAAAGA+TGG | 0.535751 | 2_2:+12718123 | Msa0238860:three_prime_UTR |
| ATTTACCTCCATTATGCGTA+GGG | 0.537053 | 2_2:-12717700 | None:intergenic |
| TTTGGCCAGCTGGCAAGAGA+AGG | 0.542150 | 2_2:+12716981 | Msa0238860:CDS |
| AATCGTTGCTGCTCAACTTG+AGG | 0.547786 | 2_2:+12717227 | Msa0238860:CDS |
| GAGATCAGCATACTGCCAAA+AGG | 0.559923 | 2_2:+12717806 | Msa0238860:CDS |
| AGAAGCAACACCGGAAGCAA+AGG | 0.569743 | 2_2:+12717161 | Msa0238860:CDS |
| AACTTGTCACCATCATCTAA+CGG | 0.580454 | 2_2:-12717491 | None:intergenic |
| TTCTGAAACTGAGAAGTGAA+TGG | 0.580741 | 2_2:+12718037 | Msa0238860:exon |
| CAGTGTAGGTGAAGAAATTG+TGG | 0.581309 | 2_2:-12717197 | None:intergenic |
| TAGAGCTGAAGATGATTCCA+TGG | 0.584821 | 2_2:-12716897 | None:intergenic |
| TGCAACAAAATGTTTGTACC+TGG | 0.588133 | 2_2:+12717031 | Msa0238860:CDS |
| CGAGTTAGACCATAAGTGGT+TGG | 0.590124 | 2_2:+12718218 | Msa0238860:three_prime_UTR |
| CTCTAACACGAGGCTTATGA+GGG | 0.595924 | 2_2:+12717992 | Msa0238860:CDS |
| AGGATTCGGAGAAGCAACAC+CGG | 0.623746 | 2_2:+12717152 | Msa0238860:intron |
| TGGCAGAAGACTCACTCGCA+TGG | 0.631217 | 2_2:+12718143 | Msa0238860:three_prime_UTR |
| GCTTATGAGGGATTACGTCT+CGG | 0.635882 | 2_2:+12718004 | Msa0238860:CDS |
| GATAAACACCCGTTAGATGA+TGG | 0.636151 | 2_2:+12717482 | Msa0238860:CDS |
| TGATGATTCTCTGAACATAG+TGG | 0.639406 | 2_2:-12717519 | None:intergenic |
| TGTAGGTGAAGAAATTGTGG+AGG | 0.663333 | 2_2:-12717194 | None:intergenic |
| AATAGCCCTACGCATAATGG+AGG | 0.664082 | 2_2:+12717695 | Msa0238860:intron |
| TTTGTTGCATTGCAACCGTG+TGG | 0.685225 | 2_2:-12717017 | None:intergenic |
| GGAGCTCTCAATTATCCACA+CGG | 0.710162 | 2_2:+12717002 | Msa0238860:CDS |
| TGGTCACTGACTCTAACACG+AGG | 0.758847 | 2_2:+12717982 | Msa0238860:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGTTATTTAATTCAAGTTAT+TGG | + | chr2_2:12717344-12717363 | Msa0238860:intron | 15.0% |
| !! | TATGGTGTAATATTATATAT+AGG | + | chr2_2:12717782-12717801 | Msa0238860:intron | 15.0% |
| !!! | TGTTATTTAATTCAAGTTAT+TGG | + | chr2_2:12717344-12717363 | Msa0238860:intron | 15.0% |
| !! | TATGGTGTAATATTATATAT+AGG | + | chr2_2:12717782-12717801 | Msa0238860:intron | 15.0% |
| !! | AAAACAAACTAAAACAACAA+AGG | - | chr2_2:12717272-12717291 | None:intergenic | 20.0% |
| !! | TTGAATTAAATAACACAACT+AGG | - | chr2_2:12717339-12717358 | None:intergenic | 20.0% |
| !! | TAATAGACACTTAACTATTA+AGG | - | chr2_2:12717588-12717607 | None:intergenic | 20.0% |
| !! | AAAACAAACTAAAACAACAA+AGG | - | chr2_2:12717272-12717291 | None:intergenic | 20.0% |
| !! | TTGAATTAAATAACACAACT+AGG | - | chr2_2:12717339-12717358 | None:intergenic | 20.0% |
| !! | TAATAGACACTTAACTATTA+AGG | - | chr2_2:12717588-12717607 | None:intergenic | 20.0% |
| !! | TTACAACTTCAATTTTGTAC+TGG | + | chr2_2:12717059-12717078 | Msa0238860:intron | 25.0% |
| ! | AAAACAACAAAGGCAAATAA+AGG | - | chr2_2:12717262-12717281 | None:intergenic | 25.0% |
| ! | TTAAATAACACAACTAGGTT+GGG | - | chr2_2:12717334-12717353 | None:intergenic | 25.0% |
| ! | ATTAAATAACACAACTAGGT+TGG | - | chr2_2:12717335-12717354 | None:intergenic | 25.0% |
| ! | ACACTTAACTATTAAGGATT+GGG | - | chr2_2:12717582-12717601 | None:intergenic | 25.0% |
| ! | TAACCAACAACTATTCTATA+TGG | + | chr2_2:12717610-12717629 | Msa0238860:intron | 25.0% |
| !! | AAAACTTGCTTAATAAGTGA+TGG | - | chr2_2:12717750-12717769 | None:intergenic | 25.0% |
| !!! | AGTTTTGATTGAGTATACTA+TGG | + | chr2_2:12717764-12717783 | Msa0238860:intron | 25.0% |
| ! | AATTACAAACCTTAAAAGCT+AGG | - | chr2_2:12717857-12717876 | None:intergenic | 25.0% |
| ! | GGAAGTTGAATAAATTTAGT+AGG | - | chr2_2:12717919-12717938 | None:intergenic | 25.0% |
| ! | AACAGTTACATGCATTATTA+AGG | - | chr2_2:12717940-12717959 | None:intergenic | 25.0% |
| !! | CATATTGATATGATGGAAAT+TGG | + | chr2_2:12718115-12718134 | Msa0238860:three_prime_UTR | 25.0% |
| !! | TTACAACTTCAATTTTGTAC+TGG | + | chr2_2:12717059-12717078 | Msa0238860:intron | 25.0% |
| ! | AAAACAACAAAGGCAAATAA+AGG | - | chr2_2:12717262-12717281 | None:intergenic | 25.0% |
| ! | TTAAATAACACAACTAGGTT+GGG | - | chr2_2:12717334-12717353 | None:intergenic | 25.0% |
| ! | ATTAAATAACACAACTAGGT+TGG | - | chr2_2:12717335-12717354 | None:intergenic | 25.0% |
| ! | ACACTTAACTATTAAGGATT+GGG | - | chr2_2:12717582-12717601 | None:intergenic | 25.0% |
| ! | TAACCAACAACTATTCTATA+TGG | + | chr2_2:12717610-12717629 | Msa0238860:intron | 25.0% |
| !! | AAAACTTGCTTAATAAGTGA+TGG | - | chr2_2:12717750-12717769 | None:intergenic | 25.0% |
| !!! | AGTTTTGATTGAGTATACTA+TGG | + | chr2_2:12717764-12717783 | Msa0238860:intron | 25.0% |
| ! | AATTACAAACCTTAAAAGCT+AGG | - | chr2_2:12717857-12717876 | None:intergenic | 25.0% |
| ! | GGAAGTTGAATAAATTTAGT+AGG | - | chr2_2:12717919-12717938 | None:intergenic | 25.0% |
| ! | AACAGTTACATGCATTATTA+AGG | - | chr2_2:12717940-12717959 | None:intergenic | 25.0% |
| !! | CATATTGATATGATGGAAAT+TGG | + | chr2_2:12718115-12718134 | Msa0238860:three_prime_UTR | 25.0% |
| !! | AACTTCAATTTTGTACTGGT+TGG | + | chr2_2:12717063-12717082 | Msa0238860:intron | 30.0% |
| AATAGTGTGCTATGTTATCT+TGG | + | chr2_2:12717125-12717144 | Msa0238860:intron | 30.0% | |
| TCATCAAGACATAAGAACTT+AGG | + | chr2_2:12717536-12717555 | Msa0238860:CDS | 30.0% | |
| AAGACATAAGAACTTAGGTA+AGG | + | chr2_2:12717541-12717560 | Msa0238860:intron | 30.0% | |
| GACACTTAACTATTAAGGAT+TGG | - | chr2_2:12717583-12717602 | None:intergenic | 30.0% | |
| TCACCATATAGAATAGTTGT+TGG | - | chr2_2:12717616-12717635 | None:intergenic | 30.0% | |
| ATCATATCAATATGTTGCAC+AGG | - | chr2_2:12718109-12718128 | None:intergenic | 30.0% | |
| TGTGCAACATATTGATATGA+TGG | + | chr2_2:12718108-12718127 | Msa0238860:three_prime_UTR | 30.0% | |
| ! | TATGATGGAAATTGGAAAGA+TGG | + | chr2_2:12718123-12718142 | Msa0238860:three_prime_UTR | 30.0% |
| !! | AACTTCAATTTTGTACTGGT+TGG | + | chr2_2:12717063-12717082 | Msa0238860:intron | 30.0% |
| AATAGTGTGCTATGTTATCT+TGG | + | chr2_2:12717125-12717144 | Msa0238860:intron | 30.0% | |
| TCATCAAGACATAAGAACTT+AGG | + | chr2_2:12717536-12717555 | Msa0238860:CDS | 30.0% | |
| AAGACATAAGAACTTAGGTA+AGG | + | chr2_2:12717541-12717560 | Msa0238860:intron | 30.0% | |
| GACACTTAACTATTAAGGAT+TGG | - | chr2_2:12717583-12717602 | None:intergenic | 30.0% | |
| TCACCATATAGAATAGTTGT+TGG | - | chr2_2:12717616-12717635 | None:intergenic | 30.0% | |
| ATCATATCAATATGTTGCAC+AGG | - | chr2_2:12718109-12718128 | None:intergenic | 30.0% | |
| TGTGCAACATATTGATATGA+TGG | + | chr2_2:12718108-12718127 | Msa0238860:three_prime_UTR | 30.0% | |
| ! | TATGATGGAAATTGGAAAGA+TGG | + | chr2_2:12718123-12718142 | Msa0238860:three_prime_UTR | 30.0% |
| ! | CCAAAAAGGATAGCTTTTGT+TGG | - | chr2_2:12716966-12716985 | None:intergenic | 35.0% |
| ! | CCAACAAAAGCTATCCTTTT+TGG | + | chr2_2:12716963-12716982 | Msa0238860:CDS | 35.0% |
| TGCAACAAAATGTTTGTACC+TGG | + | chr2_2:12717031-12717050 | Msa0238860:CDS | 35.0% | |
| ACAAAATGTTTGTACCTGGT+CGG | + | chr2_2:12717035-12717054 | Msa0238860:intron | 35.0% | |
| ! | GAAGAAATTGTGGAGGTTTT+TGG | - | chr2_2:12717190-12717209 | None:intergenic | 35.0% |
| !!! | AACGATTTTAACTGCAGTGT+AGG | - | chr2_2:12717214-12717233 | None:intergenic | 35.0% |
| CAACAAAGGCAAATAAAGGA+GGG | - | chr2_2:12717258-12717277 | None:intergenic | 35.0% | |
| ACAACAAAGGCAAATAAAGG+AGG | - | chr2_2:12717259-12717278 | None:intergenic | 35.0% | |
| ATTAGCTCAACATATGCTTC+AGG | - | chr2_2:12717452-12717471 | None:intergenic | 35.0% | |
| TGAAGCATATGTTGAGCTAA+TGG | + | chr2_2:12717451-12717470 | Msa0238860:CDS | 35.0% | |
| TGTTGAGCTAATGGAATTTG+TGG | + | chr2_2:12717460-12717479 | Msa0238860:CDS | 35.0% | |
| AACTTGTCACCATCATCTAA+CGG | - | chr2_2:12717494-12717513 | None:intergenic | 35.0% | |
| TGATGATTCTCTGAACATAG+TGG | - | chr2_2:12717522-12717541 | None:intergenic | 35.0% | |
| AAATCCTGTAAACTGATGTG+TGG | + | chr2_2:12717652-12717671 | Msa0238860:intron | 35.0% | |
| ATTTACCTCCATTATGCGTA+GGG | - | chr2_2:12717703-12717722 | None:intergenic | 35.0% | |
| ! | ACTGCCAAAAGGATTTTGAA+TGG | + | chr2_2:12717817-12717836 | Msa0238860:CDS | 35.0% |
| ! | CTGCCAAAAGGATTTTGAAT+GGG | + | chr2_2:12717818-12717837 | Msa0238860:CDS | 35.0% |
| ! | TGTCCCATTCAAAATCCTTT+TGG | - | chr2_2:12717824-12717843 | None:intergenic | 35.0% |
| !! | TTCTGAAACTGAGAAGTGAA+TGG | + | chr2_2:12718037-12718056 | Msa0238860:exon | 35.0% |
| TTCGATCAATGGGAATGAAA+GGG | - | chr2_2:12718080-12718099 | None:intergenic | 35.0% | |
| AAATCGAGTTAGACCATAAG+TGG | + | chr2_2:12718214-12718233 | Msa0238860:three_prime_UTR | 35.0% | |
| ! | CCAAAAAGGATAGCTTTTGT+TGG | - | chr2_2:12716966-12716985 | None:intergenic | 35.0% |
| ! | CCAACAAAAGCTATCCTTTT+TGG | + | chr2_2:12716963-12716982 | Msa0238860:CDS | 35.0% |
| TGCAACAAAATGTTTGTACC+TGG | + | chr2_2:12717031-12717050 | Msa0238860:CDS | 35.0% | |
| ACAAAATGTTTGTACCTGGT+CGG | + | chr2_2:12717035-12717054 | Msa0238860:intron | 35.0% | |
| ! | GAAGAAATTGTGGAGGTTTT+TGG | - | chr2_2:12717190-12717209 | None:intergenic | 35.0% |
| !!! | AACGATTTTAACTGCAGTGT+AGG | - | chr2_2:12717214-12717233 | None:intergenic | 35.0% |
| CAACAAAGGCAAATAAAGGA+GGG | - | chr2_2:12717258-12717277 | None:intergenic | 35.0% | |
| ACAACAAAGGCAAATAAAGG+AGG | - | chr2_2:12717259-12717278 | None:intergenic | 35.0% | |
| ATTAGCTCAACATATGCTTC+AGG | - | chr2_2:12717452-12717471 | None:intergenic | 35.0% | |
| TGAAGCATATGTTGAGCTAA+TGG | + | chr2_2:12717451-12717470 | Msa0238860:CDS | 35.0% | |
| TGTTGAGCTAATGGAATTTG+TGG | + | chr2_2:12717460-12717479 | Msa0238860:CDS | 35.0% | |
| AACTTGTCACCATCATCTAA+CGG | - | chr2_2:12717494-12717513 | None:intergenic | 35.0% | |
| TGATGATTCTCTGAACATAG+TGG | - | chr2_2:12717522-12717541 | None:intergenic | 35.0% | |
| AAATCCTGTAAACTGATGTG+TGG | + | chr2_2:12717652-12717671 | Msa0238860:intron | 35.0% | |
| ATTTACCTCCATTATGCGTA+GGG | - | chr2_2:12717703-12717722 | None:intergenic | 35.0% | |
| ! | ACTGCCAAAAGGATTTTGAA+TGG | + | chr2_2:12717817-12717836 | Msa0238860:CDS | 35.0% |
| ! | CTGCCAAAAGGATTTTGAAT+GGG | + | chr2_2:12717818-12717837 | Msa0238860:CDS | 35.0% |
| ! | TGTCCCATTCAAAATCCTTT+TGG | - | chr2_2:12717824-12717843 | None:intergenic | 35.0% |
| !! | TTCTGAAACTGAGAAGTGAA+TGG | + | chr2_2:12718037-12718056 | Msa0238860:exon | 35.0% |
| TTCGATCAATGGGAATGAAA+GGG | - | chr2_2:12718080-12718099 | None:intergenic | 35.0% | |
| AAATCGAGTTAGACCATAAG+TGG | + | chr2_2:12718214-12718233 | Msa0238860:three_prime_UTR | 35.0% | |
| ATTGAAGTTGTAAACCGACC+AGG | - | chr2_2:12717052-12717071 | None:intergenic | 40.0% | |
| TGCTATGTTATCTTGGATGC+AGG | + | chr2_2:12717132-12717151 | Msa0238860:intron | 40.0% | |
| GTTATCTTGGATGCAGGATT+CGG | + | chr2_2:12717138-12717157 | Msa0238860:intron | 40.0% | |
| TGTAGGTGAAGAAATTGTGG+AGG | - | chr2_2:12717197-12717216 | None:intergenic | 40.0% | |
| CAGTGTAGGTGAAGAAATTG+TGG | - | chr2_2:12717200-12717219 | None:intergenic | 40.0% | |
| CAGGATTATAACTCTGCTCA+TGG | - | chr2_2:12717433-12717452 | None:intergenic | 40.0% | |
| GATAAACACCCGTTAGATGA+TGG | + | chr2_2:12717482-12717501 | Msa0238860:CDS | 40.0% | |
| ACTTGTCACCATCATCTAAC+GGG | - | chr2_2:12717493-12717512 | None:intergenic | 40.0% | |
| TTGAATAGCCCTACGCATAA+TGG | + | chr2_2:12717692-12717711 | Msa0238860:intron | 40.0% | |
| CATTTACCTCCATTATGCGT+AGG | - | chr2_2:12717704-12717723 | None:intergenic | 40.0% | |
| ! | CTACGCATAATGGAGGTAAA+TGG | + | chr2_2:12717702-12717721 | Msa0238860:intron | 40.0% |
| GAGGTAAATGGATGACTAGT+TGG | + | chr2_2:12717714-12717733 | Msa0238860:intron | 40.0% | |
| GTTCGATCAATGGGAATGAA+AGG | - | chr2_2:12718081-12718100 | None:intergenic | 40.0% | |
| ! | CAGGCTTTTGTTCGATCAAT+GGG | - | chr2_2:12718090-12718109 | None:intergenic | 40.0% |
| ! | ACAGGCTTTTGTTCGATCAA+TGG | - | chr2_2:12718091-12718110 | None:intergenic | 40.0% |
| TACATAGCTCAGTGTTTGCA+TGG | + | chr2_2:12718178-12718197 | Msa0238860:three_prime_UTR | 40.0% | |
| ATTGAAGTTGTAAACCGACC+AGG | - | chr2_2:12717052-12717071 | None:intergenic | 40.0% | |
| TGCTATGTTATCTTGGATGC+AGG | + | chr2_2:12717132-12717151 | Msa0238860:intron | 40.0% | |
| GTTATCTTGGATGCAGGATT+CGG | + | chr2_2:12717138-12717157 | Msa0238860:intron | 40.0% | |
| TGTAGGTGAAGAAATTGTGG+AGG | - | chr2_2:12717197-12717216 | None:intergenic | 40.0% | |
| CAGTGTAGGTGAAGAAATTG+TGG | - | chr2_2:12717200-12717219 | None:intergenic | 40.0% | |
| CAGGATTATAACTCTGCTCA+TGG | - | chr2_2:12717433-12717452 | None:intergenic | 40.0% | |
| GATAAACACCCGTTAGATGA+TGG | + | chr2_2:12717482-12717501 | Msa0238860:CDS | 40.0% | |
| ACTTGTCACCATCATCTAAC+GGG | - | chr2_2:12717493-12717512 | None:intergenic | 40.0% | |
| TTGAATAGCCCTACGCATAA+TGG | + | chr2_2:12717692-12717711 | Msa0238860:intron | 40.0% | |
| CATTTACCTCCATTATGCGT+AGG | - | chr2_2:12717704-12717723 | None:intergenic | 40.0% | |
| ! | CTACGCATAATGGAGGTAAA+TGG | + | chr2_2:12717702-12717721 | Msa0238860:intron | 40.0% |
| GAGGTAAATGGATGACTAGT+TGG | + | chr2_2:12717714-12717733 | Msa0238860:intron | 40.0% | |
| GTTCGATCAATGGGAATGAA+AGG | - | chr2_2:12718081-12718100 | None:intergenic | 40.0% | |
| ! | CAGGCTTTTGTTCGATCAAT+GGG | - | chr2_2:12718090-12718109 | None:intergenic | 40.0% |
| ! | ACAGGCTTTTGTTCGATCAA+TGG | - | chr2_2:12718091-12718110 | None:intergenic | 40.0% |
| TACATAGCTCAGTGTTTGCA+TGG | + | chr2_2:12718178-12718197 | Msa0238860:three_prime_UTR | 40.0% | |
| GGTGTAGCTGGGTAAACATA+AGG | - | chr2_2:12716938-12716957 | None:intergenic | 45.0% | |
| ! | GGATAGCTTTTGTTGGTGCA+TGG | - | chr2_2:12716959-12716978 | None:intergenic | 45.0% |
| GGAGCTCTCAATTATCCACA+CGG | + | chr2_2:12717002-12717021 | Msa0238860:CDS | 45.0% | |
| TTTGTTGCATTGCAACCGTG+TGG | - | chr2_2:12717020-12717039 | None:intergenic | 45.0% | |
| !! | TTTTTGGCAGCCTTTGCTTC+CGG | - | chr2_2:12717174-12717193 | None:intergenic | 45.0% |
| AATCGTTGCTGCTCAACTTG+AGG | + | chr2_2:12717227-12717246 | Msa0238860:CDS | 45.0% | |
| AGAGCCACACATCAGTTTAC+AGG | - | chr2_2:12717659-12717678 | None:intergenic | 45.0% | |
| AATAGCCCTACGCATAATGG+AGG | + | chr2_2:12717695-12717714 | Msa0238860:intron | 45.0% | |
| GAGATCAGCATACTGCCAAA+AGG | + | chr2_2:12717806-12717825 | Msa0238860:CDS | 45.0% | |
| !! | CTTGAAGCGCCTAGCTTTTA+AGG | + | chr2_2:12717845-12717864 | Msa0238860:CDS | 45.0% |
| TAGCGTTGTCCTCTTGTAGA+TGG | + | chr2_2:12717962-12717981 | Msa0238860:intron | 45.0% | |
| AGTCAGTGACCATCTACAAG+AGG | - | chr2_2:12717974-12717993 | None:intergenic | 45.0% | |
| ACTCTAACACGAGGCTTATG+AGG | + | chr2_2:12717991-12718010 | Msa0238860:CDS | 45.0% | |
| CTCTAACACGAGGCTTATGA+GGG | + | chr2_2:12717992-12718011 | Msa0238860:CDS | 45.0% | |
| GCTTATGAGGGATTACGTCT+CGG | + | chr2_2:12718004-12718023 | Msa0238860:CDS | 45.0% | |
| CTTCTCAGTTTCAGAACGAC+TGG | - | chr2_2:12718033-12718052 | None:intergenic | 45.0% | |
| CGAGTTAGACCATAAGTGGT+TGG | + | chr2_2:12718218-12718237 | Msa0238860:three_prime_UTR | 45.0% | |
| GGTGTAGCTGGGTAAACATA+AGG | - | chr2_2:12716938-12716957 | None:intergenic | 45.0% | |
| ! | GGATAGCTTTTGTTGGTGCA+TGG | - | chr2_2:12716959-12716978 | None:intergenic | 45.0% |
| GGAGCTCTCAATTATCCACA+CGG | + | chr2_2:12717002-12717021 | Msa0238860:CDS | 45.0% | |
| TTTGTTGCATTGCAACCGTG+TGG | - | chr2_2:12717020-12717039 | None:intergenic | 45.0% | |
| !! | TTTTTGGCAGCCTTTGCTTC+CGG | - | chr2_2:12717174-12717193 | None:intergenic | 45.0% |
| AATCGTTGCTGCTCAACTTG+AGG | + | chr2_2:12717227-12717246 | Msa0238860:CDS | 45.0% | |
| AGAGCCACACATCAGTTTAC+AGG | - | chr2_2:12717659-12717678 | None:intergenic | 45.0% | |
| AATAGCCCTACGCATAATGG+AGG | + | chr2_2:12717695-12717714 | Msa0238860:intron | 45.0% | |
| GAGATCAGCATACTGCCAAA+AGG | + | chr2_2:12717806-12717825 | Msa0238860:CDS | 45.0% | |
| !! | CTTGAAGCGCCTAGCTTTTA+AGG | + | chr2_2:12717845-12717864 | Msa0238860:CDS | 45.0% |
| TAGCGTTGTCCTCTTGTAGA+TGG | + | chr2_2:12717962-12717981 | Msa0238860:intron | 45.0% | |
| AGTCAGTGACCATCTACAAG+AGG | - | chr2_2:12717974-12717993 | None:intergenic | 45.0% | |
| ACTCTAACACGAGGCTTATG+AGG | + | chr2_2:12717991-12718010 | Msa0238860:CDS | 45.0% | |
| CTCTAACACGAGGCTTATGA+GGG | + | chr2_2:12717992-12718011 | Msa0238860:CDS | 45.0% | |
| GCTTATGAGGGATTACGTCT+CGG | + | chr2_2:12718004-12718023 | Msa0238860:CDS | 45.0% | |
| CTTCTCAGTTTCAGAACGAC+TGG | - | chr2_2:12718033-12718052 | None:intergenic | 45.0% | |
| TGTTGGTGCATGGTGTAGCT+GGG | - | chr2_2:12716949-12716968 | None:intergenic | 50.0% | |
| TTGTTGGTGCATGGTGTAGC+TGG | - | chr2_2:12716950-12716969 | None:intergenic | 50.0% | |
| !! | AGCTATCCTTTTTGGCCAGC+TGG | + | chr2_2:12716971-12716990 | Msa0238860:CDS | 50.0% |
| AGGATTCGGAGAAGCAACAC+CGG | + | chr2_2:12717152-12717171 | Msa0238860:intron | 50.0% | |
| AGAAGCAACACCGGAAGCAA+AGG | + | chr2_2:12717161-12717180 | Msa0238860:CDS | 50.0% | |
| !! | ACTGATGTGTGGCTCTGACA+TGG | + | chr2_2:12717663-12717682 | Msa0238860:intron | 50.0% |
| !! | TGGTCACTGACTCTAACACG+AGG | + | chr2_2:12717982-12718001 | Msa0238860:CDS | 50.0% |
| TGTTGGTGCATGGTGTAGCT+GGG | - | chr2_2:12716949-12716968 | None:intergenic | 50.0% | |
| TTGTTGGTGCATGGTGTAGC+TGG | - | chr2_2:12716950-12716969 | None:intergenic | 50.0% | |
| !! | AGCTATCCTTTTTGGCCAGC+TGG | + | chr2_2:12716971-12716990 | Msa0238860:CDS | 50.0% |
| AGGATTCGGAGAAGCAACAC+CGG | + | chr2_2:12717152-12717171 | Msa0238860:intron | 50.0% | |
| AGAAGCAACACCGGAAGCAA+AGG | + | chr2_2:12717161-12717180 | Msa0238860:CDS | 50.0% | |
| !! | ACTGATGTGTGGCTCTGACA+TGG | + | chr2_2:12717663-12717682 | Msa0238860:intron | 50.0% |
| !! | TGGTCACTGACTCTAACACG+AGG | + | chr2_2:12717982-12718001 | Msa0238860:CDS | 50.0% |
| CTCTTGCCAGCTGGCCAAAA+AGG | - | chr2_2:12716980-12716999 | None:intergenic | 55.0% | |
| TTTGGCCAGCTGGCAAGAGA+AGG | + | chr2_2:12716981-12717000 | Msa0238860:CDS | 55.0% | |
| ! | GAAAGGGCTTGCTTTGCTGC+AGG | - | chr2_2:12718064-12718083 | None:intergenic | 55.0% |
| TGGCAGAAGACTCACTCGCA+TGG | + | chr2_2:12718143-12718162 | Msa0238860:three_prime_UTR | 55.0% | |
| CTCTTGCCAGCTGGCCAAAA+AGG | - | chr2_2:12716980-12716999 | None:intergenic | 55.0% | |
| TTTGGCCAGCTGGCAAGAGA+AGG | + | chr2_2:12716981-12717000 | Msa0238860:CDS | 55.0% | |
| ! | GAAAGGGCTTGCTTTGCTGC+AGG | - | chr2_2:12718064-12718083 | None:intergenic | 55.0% |
| TGGCAGAAGACTCACTCGCA+TGG | + | chr2_2:12718143-12718162 | Msa0238860:three_prime_UTR | 55.0% | |
| GAGCTCCTTCTCTTGCCAGC+TGG | - | chr2_2:12716989-12717008 | None:intergenic | 60.0% | |
| GAGCTCCTTCTCTTGCCAGC+TGG | - | chr2_2:12716989-12717008 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 12716899 | 12718240 | 12716899 | ID=Msa0238860;Name=Msa0238860 |
| chr2_2 | mRNA | 12716899 | 12718240 | 12716899 | ID=Msa0238860-mRNA-1;Parent=Msa0238860;Name=Msa0238860-mRNA-1;_AED=0.15;_eAED=0.15;_QI=0|1|0.83|1|1|1|6|185|173 |
| chr2_2 | exon | 12716899 | 12717052 | 12716899 | ID=Msa0238860-mRNA-1:exon:5373;Parent=Msa0238860-mRNA-1 |
| chr2_2 | exon | 12717154 | 12717248 | 12717154 | ID=Msa0238860-mRNA-1:exon:5374;Parent=Msa0238860-mRNA-1 |
| chr2_2 | exon | 12717440 | 12717557 | 12717440 | ID=Msa0238860-mRNA-1:exon:5375;Parent=Msa0238860-mRNA-1 |
| chr2_2 | exon | 12717700 | 12717716 | 12717700 | ID=Msa0238860-mRNA-1:exon:5376;Parent=Msa0238860-mRNA-1 |
| chr2_2 | exon | 12717804 | 12717866 | 12717804 | ID=Msa0238860-mRNA-1:exon:5377;Parent=Msa0238860-mRNA-1 |
| chr2_2 | exon | 12717981 | 12718240 | 12717981 | ID=Msa0238860-mRNA-1:exon:5378;Parent=Msa0238860-mRNA-1 |
| chr2_2 | CDS | 12716899 | 12717052 | 12716899 | ID=Msa0238860-mRNA-1:cds;Parent=Msa0238860-mRNA-1 |
| chr2_2 | CDS | 12717154 | 12717248 | 12717154 | ID=Msa0238860-mRNA-1:cds;Parent=Msa0238860-mRNA-1 |
| chr2_2 | CDS | 12717440 | 12717557 | 12717440 | ID=Msa0238860-mRNA-1:cds;Parent=Msa0238860-mRNA-1 |
| chr2_2 | CDS | 12717700 | 12717716 | 12717700 | ID=Msa0238860-mRNA-1:cds;Parent=Msa0238860-mRNA-1 |
| chr2_2 | CDS | 12717804 | 12717866 | 12717804 | ID=Msa0238860-mRNA-1:cds;Parent=Msa0238860-mRNA-1 |
| chr2_2 | CDS | 12717981 | 12718055 | 12717981 | ID=Msa0238860-mRNA-1:cds;Parent=Msa0238860-mRNA-1 |
| chr2_2 | three_prime_UTR | 12718056 | 12718240 | 12718056 | ID=Msa0238860-mRNA-1:three_prime_utr;Parent=Msa0238860-mRNA-1 |
| Gene Sequence |
| Protein sequence |
