AlfalfaGEDB | Msa0818550

M. sativa cultivar zhongmu-4 / Msa0818550

KEGG: K00522
GO: GO:0003674 GO:0005488 GO:0005506 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006873 GO:0006875 GO:0006879 GO:0006880 GO:0008150 GO:0009507 GO:0009536 GO:0009987 GO:0019725 GO:0030003 GO:0042592 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046872 GO:0046914 GO:0046916 GO:0048878 GO:0050801 GO:0051179 GO:0051235 GO:0051238 GO:0051641 GO:0051651 GO:0055065 GO:0055072 GO:0055076 GO:0055080 GO:0055082 GO:0065007 GO:0065008 GO:0097577 GO:0098771
PFAM: PF00210.27

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0818550	sp\|Q41709\|FRI2_VIGUN	78.313	249	50	2	1	247	1	247	2.14e-140	397

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0818550	G7K283	98.394	249	4	0	1	249	1	249	9.59e-180	503

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0008850	Msa0818550	0.800916	1.151374e-48	-8.615850e-47
Msa0014410	Msa0818550	0.823546	1.306509e-53	-8.615850e-47
Msa0018470	Msa0818550	0.844612	6.787842e-59	-8.615850e-47
Msa0035290	Msa0818550	0.864476	1.183330e-64	-8.615850e-47
Msa0035400	Msa0818550	0.862648	4.368024e-64	-8.615850e-47
Msa0064550	Msa0818550	0.838104	3.506333e-57	-8.615850e-47
Msa0090860	Msa0818550	0.800648	1.305906e-48	-8.615850e-47
Msa0101170	Msa0818550	-0.804371	2.230393e-49	-8.615850e-47
Msa0109490	Msa0818550	0.812045	5.165451e-51	-8.615850e-47
Msa0616610	Msa0818550	0.802538	5.349593e-49	-8.615850e-47
Msa0616710	Msa0818550	0.804153	2.476005e-49	-8.615850e-47
Msa0628100	Msa0818550	0.805791	1.125307e-49	-8.615850e-47
Msa0629440	Msa0818550	-0.804047	2.605501e-49	-8.615850e-47
Msa0656680	Msa0818550	0.800317	1.525063e-48	-8.615850e-47
Msa0667070	Msa0818550	-0.823928	1.063788e-53	-8.615850e-47
Msa0676100	Msa0818550	0.812930	3.308459e-51	-8.615850e-47
Msa0679780	Msa0818550	0.811262	7.646306e-51	-8.615850e-47
Msa0715510	Msa0818550	-0.808541	2.943644e-50	-8.615850e-47
Msa0746980	Msa0818550	0.859786	3.251198e-63	-8.615850e-47
Msa0748980	Msa0818550	0.800602	1.334199e-48	-8.615850e-47
Msa0772500	Msa0818550	0.809564	1.777837e-50	-8.615850e-47
Msa0773290	Msa0818550	0.801685	8.014233e-49	-8.615850e-47
Msa0790640	Msa0818550	0.811477	6.867030e-51	-8.615850e-47
Msa0798460	Msa0818550	0.802102	6.577366e-49	-8.615850e-47
Msa0801360	Msa0818550	0.838123	3.465952e-57	-8.615850e-47
Msa0813630	Msa0818550	0.802485	5.485569e-49	-8.615850e-47
Msa0818440	Msa0818550	0.978331	1.328851e-145	-8.615850e-47
Msa0818550	Msa0828570	0.827831	1.259172e-54	-8.615850e-47
Msa0818550	Msa0839830	0.832092	1.151388e-55	-8.615850e-47
Msa0818550	Msa0858910	0.931162	5.672905e-94	-8.615850e-47
Msa0818550	Msa0899730	0.844154	9.009522e-59	-8.615850e-47
Msa0818550	Msa0964650	0.853548	2.222245e-61	-8.615850e-47
Msa0818550	Msa0984000	0.810803	9.610388e-51	-8.615850e-47
Msa0818550	Msa0999590	0.830737	2.481544e-55	-8.615850e-47
Msa0818550	Msa1040730	-0.810203	1.295231e-50	-8.615850e-47
Msa0818550	Msa1137940	0.803167	3.967615e-49	-8.615850e-47
Msa0818550	Msa1141250	-0.817133	3.862542e-52	-8.615850e-47
Msa0818550	Msa1153000	-0.827011	1.980138e-54	-8.615850e-47
Msa0818550	Msa1158090	0.800934	1.141526e-48	-8.615850e-47
Msa0818550	Msa1180050	0.857458	1.610433e-62	-8.615850e-47
Msa0818550	Msa1198450	0.825222	5.273894e-54	-8.615850e-47
Msa0818550	Msa1211390	0.817673	2.918497e-52	-8.615850e-47
Msa0818550	Msa1212760	0.819490	1.130202e-52	-8.615850e-47
Msa0818550	Msa1232270	0.869070	4.076910e-66	-8.615850e-47
Msa0818550	Msa1241820	0.833184	6.170026e-56	-8.615850e-47
Msa0818550	Msa1252070	0.802067	6.688093e-49	-8.615850e-47
Msa0818550	Msa1270770	0.854507	1.175240e-61	-8.615850e-47
Msa0818550	Msa1313050	0.839395	1.625861e-57	-8.615850e-47
Msa0818550	Msa1335970	-0.804641	1.959064e-49	-8.615850e-47
Msa0818550	Msa1349810	0.811429	7.032381e-51	-8.615850e-47
Msa0818550	Msa1378470	0.831537	1.577709e-55	-8.615850e-47
Msa0818550	Msa1384620	0.800277	1.553873e-48	-8.615850e-47
Msa0818550	Msa1388520	0.825377	4.846398e-54	-8.615850e-47
Msa0818550	Msa1421870	0.820628	6.204163e-53	-8.615850e-47
Msa0818550	Msa1447560	0.808478	3.036177e-50	-8.615850e-47
Msa0818550	Msa1466350	0.816790	4.611259e-52	-8.615850e-47
Msa0129360	Msa0818550	0.874040	9.211429e-68	-8.615850e-47
Msa0138390	Msa0818550	-0.846380	2.252674e-59	-8.615850e-47
Msa0154270	Msa0818550	0.827281	1.705908e-54	-8.615850e-47
Msa0155610	Msa0818550	0.820607	6.273545e-53	-8.615850e-47
Msa0158610	Msa0818550	0.846464	2.136566e-59	-8.615850e-47
Msa0176040	Msa0818550	0.847364	1.212171e-59	-8.615850e-47
Msa0198440	Msa0818550	0.837878	4.008135e-57	-8.615850e-47
Msa0200840	Msa0818550	0.819400	1.184686e-52	-8.615850e-47
Msa0200870	Msa0818550	0.808059	3.730181e-50	-8.615850e-47
Msa0212730	Msa0818550	0.826321	2.893326e-54	-8.615850e-47
Msa0225880	Msa0818550	0.874912	4.661034e-68	-8.615850e-47
Msa0377280	Msa0818550	0.820313	7.327431e-53	-8.615850e-47
Msa0378700	Msa0818550	0.809068	2.270819e-50	-8.615850e-47
Msa0401340	Msa0818550	0.813133	2.986377e-51	-8.615850e-47
Msa0404690	Msa0818550	0.826026	3.400201e-54	-8.615850e-47
Msa0412190	Msa0818550	0.815051	1.126962e-51	-8.615850e-47
Msa0418430	Msa0818550	0.822815	1.935831e-53	-8.615850e-47
Msa0448120	Msa0818550	0.820214	7.720251e-53	-8.615850e-47
Msa0456760	Msa0818550	0.801779	7.665796e-49	-8.615850e-47
Msa0462590	Msa0818550	0.831796	1.362375e-55	-8.615850e-47
Msa0465800	Msa0818550	0.859181	4.939773e-63	-8.615850e-47
Msa0472740	Msa0818550	0.868100	8.387508e-66	-8.615850e-47
Msa0240450	Msa0818550	-0.843795	1.124385e-58	-8.615850e-47
Msa0243470	Msa0818550	0.815851	7.477996e-52	-8.615850e-47
Msa0253160	Msa0818550	0.815878	7.377733e-52	-8.615850e-47
Msa0260470	Msa0818550	0.869301	3.429770e-66	-8.615850e-47
Msa0265580	Msa0818550	0.826307	2.914379e-54	-8.615850e-47
Msa0278670	Msa0818550	0.835427	1.688750e-56	-8.615850e-47
Msa0281940	Msa0818550	0.803305	3.713808e-49	-8.615850e-47
Msa0291940	Msa0818550	0.812184	4.816041e-51	-8.615850e-47
Msa0303440	Msa0818550	0.828178	1.038521e-54	-8.615850e-47
Msa0303500	Msa0818550	0.816378	5.702580e-52	-8.615850e-47
Msa0304110	Msa0818550	0.873881	1.042216e-67	-8.615850e-47
Msa0309650	Msa0818550	-0.801146	1.033018e-48	-8.615850e-47
Msa0318070	Msa0818550	0.839946	1.168803e-57	-8.615850e-47
Msa0341190	Msa0818550	0.868651	5.573334e-66	-8.615850e-47
Msa0358290	Msa0818550	0.872772	2.459462e-67	-8.615850e-47
Msa0530950	Msa0818550	0.816216	6.198732e-52	-8.615850e-47
Msa0545230	Msa0818550	0.826798	2.226005e-54	-8.615850e-47
Msa0593810	Msa0818550	0.816664	4.922482e-52	-8.615850e-47
Msa0600820	Msa0818550	0.802804	4.715021e-49	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0818550	MtrunA17_Chr5g0437531	98.394	249	4	0	1	249	1	249	0.0	503
Msa0818550	MtrunA17_Chr7g0243241	75.622	201	49	0	48	248	55	255	4.44e-107	310
Msa0818550	MtrunA17_Chr4g0005581	77.157	197	45	0	48	244	54	250	2.15e-106	308
Msa0818550	MtrunA17_Chr5g0431291	68.462	130	37	1	120	249	11	136	3.43e-59	184

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0818550	AT3G11050.1	72.581	248	57	4	2	245	11	251	3.65e-124	353
Msa0818550	AT2G40300.1	80.583	206	39	1	38	243	53	257	8.76e-118	337
Msa0818550	AT5G01600.1	65.863	249	69	2	12	244	7	255	1.77e-114	328
Msa0818550	AT3G56090.1	79.798	198	40	0	50	247	62	259	8.14e-112	322
Msa0818550	AT3G61010.1	74.000	50	13	0	91	140	369	418	7.32e-18	82.4
Msa0818550	AT3G61010.3	74.000	50	13	0	91	140	369	418	7.32e-18	82.4

Find 88 sgRNAs with CRISPR-Local

Find 450 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GAACTTGATTTGTTCATTAA+TGG	0.196228	5_3:-54487203	None:intergenic
TTATAATTTCATTTGGAAAT+AGG	0.210867	5_3:-54490413	None:intergenic
GCTTCAACGTGGAAGTAAAT+TGG	0.267790	5_3:+54487018	Msa0818550:CDS
AACCCACATAAACTTTATTA+AGG	0.271238	5_3:-54489929	None:intergenic
AAAGACCGGTGATGTGAATT+TGG	0.292838	5_3:+54489416	Msa0818550:CDS
CTTTCCTTTATAATTTCATT+TGG	0.328149	5_3:-54490420	None:intergenic
ATTGAGACTACTTGATCTAA+TGG	0.328186	5_3:-54490314	None:intergenic
ATTTCCAAATGAAATTATAA+AGG	0.328858	5_3:+54490416	Msa0818550:three_prime_UTR
TCAGTTGTTGTTCCTATTTG+TGG	0.331327	5_3:-54490549	None:intergenic
TGAATCACACAATCACTCTT+TGG	0.332003	5_3:-54490777	None:intergenic
TTGATGTAATTTCAGGTGTC+TGG	0.348601	5_3:+54489768	Msa0818550:intron
GTGCAAAGCGTCACCCTTAT+CGG	0.353274	5_3:-54488299	None:intergenic
ATCAAGTAGTCTCAATATTA+TGG	0.353507	5_3:+54490321	Msa0818550:three_prime_UTR
TGAGAAATTGATGGAATATC+AGG	0.354314	5_3:+54487581	Msa0818550:CDS
CAGCTTTGAGAAGCATGGTT+AGG	0.367473	5_3:-54486940	None:intergenic
GTCTTACATTGTGCAGGTTA+AGG	0.377061	5_3:-54489266	None:intergenic
AAAGAATCTTGAGGAACAAT+AGG	0.383929	5_3:-54487145	None:intergenic
ACCCAGGACTTGAATACTTT+AGG	0.401301	5_3:-54490508	None:intergenic
TGCAACCACATTCCACAAAT+AGG	0.404951	5_3:+54490537	Msa0818550:three_prime_UTR
GATGGGACATGCGTCATATA+CGG	0.406785	5_3:+54490901	Msa0818550:three_prime_UTR
GAAGGGCACTATTGTACATT+GGG	0.412425	5_3:+54490237	Msa0818550:three_prime_UTR
TGTGAATTTGGCAGACTTTG+TGG	0.418668	5_3:+54489428	Msa0818550:CDS
TATTGTACATTGGGGAGCTT+AGG	0.430057	5_3:+54490246	Msa0818550:three_prime_UTR
TGAGTTTGATCATGCCGATA+AGG	0.436295	5_3:+54488285	Msa0818550:CDS
ACGCCTTAATAAAGTTTATG+TGG	0.441352	5_3:+54489926	Msa0818550:three_prime_UTR
TGCTCTTCATGCTATGAAAG+AGG	0.450227	5_3:+54490477	Msa0818550:three_prime_UTR
CACCTAAAGTATTCAAGTCC+TGG	0.450327	5_3:+54490506	Msa0818550:three_prime_UTR
ACTTGAATACTTTAGGTGTC+AGG	0.452139	5_3:-54490501	None:intergenic
TTCTTAGATTCACTAGTGCT+TGG	0.454488	5_3:-54490056	None:intergenic
AGCTTTGAGAAGCATGGTTA+GGG	0.455565	5_3:-54486939	None:intergenic
GAGTTTGATCATGCCGATAA+GGG	0.461004	5_3:+54488286	Msa0818550:CDS
ACCATTGTCTTCTTAGAATG+AGG	0.463440	5_3:-54490692	None:intergenic
CCACAGGTTGCCTCAAAGAC+CGG	0.468429	5_3:+54489402	Msa0818550:intron
GGAAAATAAATAAAATTCAG+AGG	0.468704	5_3:-54486887	None:intergenic
TAAATTACTTTCAAGTCGGA+TGG	0.478912	5_3:+54490883	Msa0818550:three_prime_UTR
ATTCACATCACCGGTCTTTG+AGG	0.489139	5_3:-54489412	None:intergenic
AGGGCATGCTGAGAAATTGA+TGG	0.491044	5_3:+54487572	Msa0818550:CDS
AATTTCATTTGGAAATAGGT+TGG	0.491759	5_3:-54490409	None:intergenic
CACACAATCACTCTTTGGAT+TGG	0.492644	5_3:-54490772	None:intergenic
ATGTAAGAGAAGATTGAAGT+TGG	0.497855	5_3:+54490859	Msa0818550:three_prime_UTR
ACAGATACAAATGACTAAAG+TGG	0.498850	5_3:-54489849	None:intergenic
CAGAACGAAAATGGAGAGAA+AGG	0.499257	5_3:-54486908	None:intergenic
TTAGATTCACTAGTGCTTGG+TGG	0.499882	5_3:-54490053	None:intergenic
ACCTAAAGTATTCAAGTCCT+GGG	0.503240	5_3:+54490507	Msa0818550:three_prime_UTR
AATGGAACTTGCATTGTCCT+TGG	0.503326	5_3:+54489221	Msa0818550:CDS
CGCCTTAATAAAGTTTATGT+GGG	0.510516	5_3:+54489927	Msa0818550:three_prime_UTR
TTTACTTAGTAGTTGATCCA+TGG	0.513824	5_3:+54489977	Msa0818550:three_prime_UTR
GAAAATGAAACTGAAAATGT+TGG	0.524869	5_3:-54486859	None:intergenic
CAGATACAAATGACTAAAGT+GGG	0.526697	5_3:-54489848	None:intergenic
CAAGATAACGAAAGAGAATG+AGG	0.527270	5_3:-54490362	None:intergenic
AAACATGTCTTACATTGTGC+AGG	0.531800	5_3:-54489272	None:intergenic
TTGTTCCTATTTGTGGAATG+TGG	0.532812	5_3:-54490542	None:intergenic
TATTGACTAGAACTAGTAGT+TGG	0.533563	5_3:+54489894	Msa0818550:three_prime_UTR
TACAGCAGCTTTGAGAAGCA+TGG	0.535205	5_3:-54486945	None:intergenic
GAAACTGAAAATGTTGGATC+GGG	0.536904	5_3:-54486853	None:intergenic
CTCATTTGTTAGCTTCTCCA+AGG	0.537044	5_3:-54489238	None:intergenic
TCGTAGCAGAAACAGCGATT+CGG	0.538135	5_3:-54487042	None:intergenic
AGAGATAATGTTGCGCTGAA+AGG	0.541910	5_3:+54487391	Msa0818550:CDS
GTCTGCCAAATTCACATCAC+CGG	0.543362	5_3:-54489421	None:intergenic
TTACTTCCACGTTGAAGCAA+CGG	0.548255	5_3:-54487013	None:intergenic
AAATTACTTTCAAGTCGGAT+GGG	0.556558	5_3:+54490884	Msa0818550:three_prime_UTR
TGGTTAAATTACTTTCAAGT+CGG	0.559722	5_3:+54490879	Msa0818550:three_prime_UTR
TGAAACTGAAAATGTTGGAT+CGG	0.559994	5_3:-54486854	None:intergenic
ATCGCTGTTTCTGCTACGAA+AGG	0.563174	5_3:+54487046	Msa0818550:CDS
GTTGCTCAGCTAAGAAGAGT+TGG	0.565145	5_3:+54489636	Msa0818550:CDS
AGAAGAGTTGGCAAAGGACA+TGG	0.569821	5_3:+54489648	Msa0818550:CDS
GAAAATAAATAAAATTCAGA+GGG	0.570255	5_3:-54486886	None:intergenic
GAATCTAGTGAAGAGGAAAG+AGG	0.571340	5_3:+54487552	Msa0818550:CDS
AGAAGGGCACTATTGTACAT+TGG	0.572077	5_3:+54490236	Msa0818550:three_prime_UTR
GATAAGGGTGACGCTTTGCA+CGG	0.580509	5_3:+54488301	Msa0818550:CDS
ATAAAGGAAAGATAGAAACT+TGG	0.584379	5_3:+54490432	Msa0818550:three_prime_UTR
AATCTAGTGAAGAGGAAAGA+GGG	0.584769	5_3:+54487553	Msa0818550:CDS
ACTTAGTAGTTGATCCATGG+TGG	0.592027	5_3:+54489980	Msa0818550:three_prime_UTR
AATGGCTTTCGAGATACAGA+AGG	0.598486	5_3:+54490219	Msa0818550:three_prime_UTR
TGACGAGCTAAAGAATCTTG+AGG	0.605682	5_3:-54487154	None:intergenic
TCTTAGCTGAGCAACATACT+CGG	0.619174	5_3:-54489628	None:intergenic
ACATAAACTTTATTAAGGCG+TGG	0.619896	5_3:-54489924	None:intergenic
ACAAAACACCGGTTAAAACA+CGG	0.624694	5_3:-54487081	None:intergenic
AAAAGGTTCAAACAAAACAC+CGG	0.645626	5_3:-54487092	None:intergenic
CAGCTAAGAAGAGTTGGCAA+AGG	0.650592	5_3:+54489642	Msa0818550:CDS
TGATTGTGTGATTCACAACA+CGG	0.652671	5_3:+54490785	Msa0818550:three_prime_UTR
TTGATTCCGTTGCTTCAACG+TGG	0.658320	5_3:+54487007	Msa0818550:CDS
ATGGCTTTCGAGATACAGAA+GGG	0.664485	5_3:+54490220	Msa0818550:three_prime_UTR
TGTGGTTGCATGTGAAACCC+AGG	0.667031	5_3:-54490524	None:intergenic
GCATGATCAAACTCAGAGAG+CGG	0.671716	5_3:-54488277	None:intergenic
TCCTCATTCTAAGAAGACAA+TGG	0.671997	5_3:+54490691	Msa0818550:three_prime_UTR
GATTGTGTGATTCACAACAC+GGG	0.675307	5_3:+54490786	Msa0818550:three_prime_UTR
AAGGGCACTATTGTACATTG+GGG	0.707227	5_3:+54490238	Msa0818550:three_prime_UTR

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TGTTTTAATTTATTTTGTTT+TGG	+	chr5_3:54487434-54487453	Msa0818550:intron	10.0%
!!	ATTTACTTTACAAAATATTT+CGG	-	chr5_3:54489000-54489019	None:intergenic	10.0%
!!!	TGTTTTAATTTATTTTGTTT+TGG	+	chr5_3:54487434-54487453	Msa0818550:intron	10.0%
!!	ATTTACTTTACAAAATATTT+CGG	-	chr5_3:54489000-54489019	None:intergenic	10.0%
!!	GAAAATAAATAAAATTCAGA+GGG	-	chr5_3:54486889-54486908	None:intergenic	15.0%
!!!	TTTTGTTTTGGTTTTAATTT+TGG	+	chr5_3:54487446-54487465	Msa0818550:intron	15.0%
!!!	TTTTGTTTATAGGTTTTTTA+AGG	+	chr5_3:54487530-54487549	Msa0818550:intron	15.0%
!!!	AATTTGACGATTTTTTAAAT+CGG	+	chr5_3:54487652-54487671	Msa0818550:intron	15.0%
!!	TATATTACTCTAACAAAAAA+TGG	+	chr5_3:54487848-54487867	Msa0818550:intron	15.0%
!!!	TGTTTTATTTTTAGAACAAA+AGG	+	chr5_3:54488221-54488240	Msa0818550:intron	15.0%
!!!	GTTTTATTTTTAGAACAAAA+GGG	+	chr5_3:54488222-54488241	Msa0818550:intron	15.0%
!!!	TTTTATTTTTAGAACAAAAG+GGG	+	chr5_3:54488223-54488242	Msa0818550:intron	15.0%
!!!	ATCATTATTTTTCTATTCAT+AGG	+	chr5_3:54489584-54489603	Msa0818550:intron	15.0%
!!!	TCAAATTTTTGAATTGTTAA+TGG	+	chr5_3:54490201-54490220	Msa0818550:three_prime_UTR	15.0%
!!	TTATAATTTCATTTGGAAAT+AGG	-	chr5_3:54490416-54490435	None:intergenic	15.0%
!!	ATTTCCAAATGAAATTATAA+AGG	+	chr5_3:54490416-54490435	Msa0818550:three_prime_UTR	15.0%
!!	GAAAATAAATAAAATTCAGA+GGG	-	chr5_3:54486889-54486908	None:intergenic	15.0%
!!!	TTTTGTTTTGGTTTTAATTT+TGG	+	chr5_3:54487446-54487465	Msa0818550:intron	15.0%
!!!	TTTTGTTTATAGGTTTTTTA+AGG	+	chr5_3:54487530-54487549	Msa0818550:intron	15.0%
!!!	AATTTGACGATTTTTTAAAT+CGG	+	chr5_3:54487652-54487671	Msa0818550:intron	15.0%
!!	TATATTACTCTAACAAAAAA+TGG	+	chr5_3:54487848-54487867	Msa0818550:intron	15.0%
!!!	TGTTTTATTTTTAGAACAAA+AGG	+	chr5_3:54488221-54488240	Msa0818550:intron	15.0%
!!!	GTTTTATTTTTAGAACAAAA+GGG	+	chr5_3:54488222-54488241	Msa0818550:intron	15.0%
!!!	TTTTATTTTTAGAACAAAAG+GGG	+	chr5_3:54488223-54488242	Msa0818550:intron	15.0%
!!!	ATCATTATTTTTCTATTCAT+AGG	+	chr5_3:54489584-54489603	Msa0818550:intron	15.0%
!!!	TCAAATTTTTGAATTGTTAA+TGG	+	chr5_3:54490201-54490220	Msa0818550:three_prime_UTR	15.0%
!!	TTATAATTTCATTTGGAAAT+AGG	-	chr5_3:54490416-54490435	None:intergenic	15.0%
!!	ATTTCCAAATGAAATTATAA+AGG	+	chr5_3:54490416-54490435	Msa0818550:three_prime_UTR	15.0%
!!	GGAAAATAAATAAAATTCAG+AGG	-	chr5_3:54486890-54486909	None:intergenic	20.0%
!!!	GATTATGTTGTTTTGTTTAT+AGG	+	chr5_3:54487520-54487539	Msa0818550:intron	20.0%
!!	TCGTCAAATTTCATTAAATT+GGG	-	chr5_3:54487642-54487661	None:intergenic	20.0%
!!	ATCGTCAAATTTCATTAAAT+TGG	-	chr5_3:54487643-54487662	None:intergenic	20.0%
!!	TTTATTATATACCGTTGTTA+TGG	-	chr5_3:54487893-54487912	None:intergenic	20.0%
!!	GGTATATAATAAATCACAAA+AGG	+	chr5_3:54487900-54487919	Msa0818550:intron	20.0%
!!	AAGATAATTGATGAATTTGT+GGG	+	chr5_3:54488491-54488510	Msa0818550:intron	20.0%
!!	CTAAAAATAAAACGGAAATA+TGG	-	chr5_3:54489505-54489524	None:intergenic	20.0%
!!!	TCCGTTTTATTTTTAGTTTA+AGG	+	chr5_3:54489509-54489528	Msa0818550:intron	20.0%
!!	CCCTTAAACTAAAAATAAAA+CGG	-	chr5_3:54489513-54489532	None:intergenic	20.0%
!!!	CCGTTTTATTTTTAGTTTAA+GGG	+	chr5_3:54489510-54489529	Msa0818550:intron	20.0%
!!!	ATTATTTTTCTATTCATAGG+TGG	+	chr5_3:54489587-54489606	Msa0818550:intron	20.0%
!!!	TTTTAAAGTGTTAACTTATG+TGG	+	chr5_3:54489740-54489759	Msa0818550:intron	20.0%
!!	CTTTCCTTTATAATTTCATT+TGG	-	chr5_3:54490423-54490442	None:intergenic	20.0%
!!	ACTAAAGTAGTAATTAATGT+GGG	-	chr5_3:54490611-54490630	None:intergenic	20.0%
!!	GGAAAATAAATAAAATTCAG+AGG	-	chr5_3:54486890-54486909	None:intergenic	20.0%
!!!	GATTATGTTGTTTTGTTTAT+AGG	+	chr5_3:54487520-54487539	Msa0818550:intron	20.0%
!!	TCGTCAAATTTCATTAAATT+GGG	-	chr5_3:54487642-54487661	None:intergenic	20.0%
!!	ATCGTCAAATTTCATTAAAT+TGG	-	chr5_3:54487643-54487662	None:intergenic	20.0%
!!	TTTATTATATACCGTTGTTA+TGG	-	chr5_3:54487893-54487912	None:intergenic	20.0%
!!	GGTATATAATAAATCACAAA+AGG	+	chr5_3:54487900-54487919	Msa0818550:intron	20.0%
!!	AAGATAATTGATGAATTTGT+GGG	+	chr5_3:54488491-54488510	Msa0818550:intron	20.0%
!!	CTAAAAATAAAACGGAAATA+TGG	-	chr5_3:54489505-54489524	None:intergenic	20.0%
!!!	TCCGTTTTATTTTTAGTTTA+AGG	+	chr5_3:54489509-54489528	Msa0818550:intron	20.0%
!!	CCCTTAAACTAAAAATAAAA+CGG	-	chr5_3:54489513-54489532	None:intergenic	20.0%
!!!	CCGTTTTATTTTTAGTTTAA+GGG	+	chr5_3:54489510-54489529	Msa0818550:intron	20.0%
!!!	ATTATTTTTCTATTCATAGG+TGG	+	chr5_3:54489587-54489606	Msa0818550:intron	20.0%
!!!	TTTTAAAGTGTTAACTTATG+TGG	+	chr5_3:54489740-54489759	Msa0818550:intron	20.0%
!!	CTTTCCTTTATAATTTCATT+TGG	-	chr5_3:54490423-54490442	None:intergenic	20.0%
!!	ACTAAAGTAGTAATTAATGT+GGG	-	chr5_3:54490611-54490630	None:intergenic	20.0%
!	GAAAATGAAACTGAAAATGT+TGG	-	chr5_3:54486862-54486881	None:intergenic	25.0%
!!!	GAACTTGATTTGTTCATTAA+TGG	-	chr5_3:54487206-54487225	None:intergenic	25.0%
!	TCAATAGAATACCATAACAA+CGG	+	chr5_3:54487879-54487898	Msa0818550:intron	25.0%
!	TACTAACTTAGAAACATAAG+TGG	+	chr5_3:54487927-54487946	Msa0818550:intron	25.0%
!	GTGTTAGATAATAGGTTATT+GGG	-	chr5_3:54487967-54487986	None:intergenic	25.0%
!	AGTGTTAGATAATAGGTTAT+TGG	-	chr5_3:54487968-54487987	None:intergenic	25.0%
!!!	ACTTATTTTTGTTGCCTTAT+TGG	+	chr5_3:54488161-54488180	Msa0818550:intron	25.0%
!	TAGATCATTTGTTCTGTAAT+TGG	+	chr5_3:54488343-54488362	Msa0818550:intron	25.0%
!	GAAGATAATTGATGAATTTG+TGG	+	chr5_3:54488490-54488509	Msa0818550:intron	25.0%
!	TTGTCGAAACTATAAAACTA+AGG	-	chr5_3:54488810-54488829	None:intergenic	25.0%
!	TGGGTATATCATAATTGTAT+TGG	-	chr5_3:54488849-54488868	None:intergenic	25.0%
!	TACAATTATGATATACCCAA+AGG	+	chr5_3:54488850-54488869	Msa0818550:intron	25.0%
!	CTTAATGATTACAAGAAACA+TGG	-	chr5_3:54488961-54488980	None:intergenic	25.0%
!!	CATAAATGTAATCTGAAATC+TGG	-	chr5_3:54489028-54489047	None:intergenic	25.0%
!	TACAAAACTAGTAATTAGAG+GGG	-	chr5_3:54489061-54489080	None:intergenic	25.0%
!	CTACAAAACTAGTAATTAGA+GGG	-	chr5_3:54489062-54489081	None:intergenic	25.0%
!	TCTACAAAACTAGTAATTAG+AGG	-	chr5_3:54489063-54489082	None:intergenic	25.0%
!!!	ATACTCGGATATTTTTTTGA+TGG	-	chr5_3:54489616-54489635	None:intergenic	25.0%
!	AGTTAGAAAAATAATGTGCA+TGG	-	chr5_3:54489694-54489713	None:intergenic	25.0%
!	AACCCACATAAACTTTATTA+AGG	-	chr5_3:54489932-54489951	None:intergenic	25.0%
!	AGTAAACTGAAAAATAGCAA+TGG	-	chr5_3:54489963-54489982	None:intergenic	25.0%
!!!	GCTACTTTTAAGTAATTTTG+TGG	+	chr5_3:54490175-54490194	Msa0818550:intron	25.0%
!	ATCAAGTAGTCTCAATATTA+TGG	+	chr5_3:54490321-54490340	Msa0818550:three_prime_UTR	25.0%
!	AATTTCATTTGGAAATAGGT+TGG	-	chr5_3:54490412-54490431	None:intergenic	25.0%
!	ATAAAGGAAAGATAGAAACT+TGG	+	chr5_3:54490432-54490451	Msa0818550:three_prime_UTR	25.0%
!!	CTTGGTCTAATAAAATTTTC+TGG	+	chr5_3:54490450-54490469	Msa0818550:three_prime_UTR	25.0%
!	GACTAAAGTAGTAATTAATG+TGG	-	chr5_3:54490612-54490631	None:intergenic	25.0%
!	ACTAAAAAGATACAGAACTT+AGG	+	chr5_3:54490644-54490663	Msa0818550:intron	25.0%
!!	TGGTTAAATTACTTTCAAGT+CGG	+	chr5_3:54490879-54490898	Msa0818550:three_prime_UTR	25.0%
!	GAAAATGAAACTGAAAATGT+TGG	-	chr5_3:54486862-54486881	None:intergenic	25.0%
!!!	GAACTTGATTTGTTCATTAA+TGG	-	chr5_3:54487206-54487225	None:intergenic	25.0%
!	TCAATAGAATACCATAACAA+CGG	+	chr5_3:54487879-54487898	Msa0818550:intron	25.0%
!	TACTAACTTAGAAACATAAG+TGG	+	chr5_3:54487927-54487946	Msa0818550:intron	25.0%
!	GTGTTAGATAATAGGTTATT+GGG	-	chr5_3:54487967-54487986	None:intergenic	25.0%
!	AGTGTTAGATAATAGGTTAT+TGG	-	chr5_3:54487968-54487987	None:intergenic	25.0%
!!!	ACTTATTTTTGTTGCCTTAT+TGG	+	chr5_3:54488161-54488180	Msa0818550:intron	25.0%
!	TAGATCATTTGTTCTGTAAT+TGG	+	chr5_3:54488343-54488362	Msa0818550:intron	25.0%
!	GAAGATAATTGATGAATTTG+TGG	+	chr5_3:54488490-54488509	Msa0818550:intron	25.0%
!	TTGTCGAAACTATAAAACTA+AGG	-	chr5_3:54488810-54488829	None:intergenic	25.0%
!	TGGGTATATCATAATTGTAT+TGG	-	chr5_3:54488849-54488868	None:intergenic	25.0%
!	TACAATTATGATATACCCAA+AGG	+	chr5_3:54488850-54488869	Msa0818550:intron	25.0%
!	CTTAATGATTACAAGAAACA+TGG	-	chr5_3:54488961-54488980	None:intergenic	25.0%
!!	CATAAATGTAATCTGAAATC+TGG	-	chr5_3:54489028-54489047	None:intergenic	25.0%
!	TACAAAACTAGTAATTAGAG+GGG	-	chr5_3:54489061-54489080	None:intergenic	25.0%
!	CTACAAAACTAGTAATTAGA+GGG	-	chr5_3:54489062-54489081	None:intergenic	25.0%
!	TCTACAAAACTAGTAATTAG+AGG	-	chr5_3:54489063-54489082	None:intergenic	25.0%
!!!	ATACTCGGATATTTTTTTGA+TGG	-	chr5_3:54489616-54489635	None:intergenic	25.0%
!	AGTTAGAAAAATAATGTGCA+TGG	-	chr5_3:54489694-54489713	None:intergenic	25.0%
!	AACCCACATAAACTTTATTA+AGG	-	chr5_3:54489932-54489951	None:intergenic	25.0%
!	AGTAAACTGAAAAATAGCAA+TGG	-	chr5_3:54489963-54489982	None:intergenic	25.0%
!!!	GCTACTTTTAAGTAATTTTG+TGG	+	chr5_3:54490175-54490194	Msa0818550:intron	25.0%
!	ATCAAGTAGTCTCAATATTA+TGG	+	chr5_3:54490321-54490340	Msa0818550:three_prime_UTR	25.0%
!	AATTTCATTTGGAAATAGGT+TGG	-	chr5_3:54490412-54490431	None:intergenic	25.0%
!	ATAAAGGAAAGATAGAAACT+TGG	+	chr5_3:54490432-54490451	Msa0818550:three_prime_UTR	25.0%
!!	CTTGGTCTAATAAAATTTTC+TGG	+	chr5_3:54490450-54490469	Msa0818550:three_prime_UTR	25.0%
!	GACTAAAGTAGTAATTAATG+TGG	-	chr5_3:54490612-54490631	None:intergenic	25.0%
!	ACTAAAAAGATACAGAACTT+AGG	+	chr5_3:54490644-54490663	Msa0818550:intron	25.0%
!!	TGGTTAAATTACTTTCAAGT+CGG	+	chr5_3:54490879-54490898	Msa0818550:three_prime_UTR	25.0%
	TGAAACTGAAAATGTTGGAT+CGG	-	chr5_3:54486857-54486876	None:intergenic	30.0%
!!!	AACAATAACCGTGTTTTAAC+CGG	+	chr5_3:54487073-54487092	Msa0818550:CDS	30.0%
	AAAAGGTTCAAACAAAACAC+CGG	-	chr5_3:54487095-54487114	None:intergenic	30.0%
!!	TTTGTTTGAACCTTTTGAAG+AGG	+	chr5_3:54487099-54487118	Msa0818550:CDS	30.0%
!!	ACCTTTTGAAGAGGTTAAAA+AGG	+	chr5_3:54487108-54487127	Msa0818550:CDS	30.0%
!	TCCTTTTTAACCTCTTCAAA+AGG	-	chr5_3:54487112-54487131	None:intergenic	30.0%
	AAAGAATCTTGAGGAACAAT+AGG	-	chr5_3:54487148-54487167	None:intergenic	30.0%
!!	TTTGTTGTTGTTGTTGTTGT+TGG	+	chr5_3:54487306-54487325	Msa0818550:intron	30.0%
!!	TTTTAAGGAATCTAGTGAAG+AGG	+	chr5_3:54487545-54487564	Msa0818550:CDS	30.0%
	TGAGAAATTGATGGAATATC+AGG	+	chr5_3:54487581-54487600	Msa0818550:CDS	30.0%
	TTGACACCAATAGTAATCTA+AGG	+	chr5_3:54487735-54487754	Msa0818550:intron	30.0%
	ACGTTTCCTTAGATTACTAT+TGG	-	chr5_3:54487744-54487763	None:intergenic	30.0%
!!	CCTTTGAAGTGTTAGATAAT+AGG	-	chr5_3:54487975-54487994	None:intergenic	30.0%
	CCTATTATCTAACACTTCAA+AGG	+	chr5_3:54487972-54487991	Msa0818550:intron	30.0%
!	TGTTAATCAACTGTTAGCTT+TGG	+	chr5_3:54488015-54488034	Msa0818550:intron	30.0%
	CTTTGGTTACTAGATCAATA+AGG	+	chr5_3:54488032-54488051	Msa0818550:intron	30.0%
	AAATTCGACGACTTTCTAAT+CGG	-	chr5_3:54488098-54488117	None:intergenic	30.0%
	TCACAAGATAACTACCAATA+AGG	-	chr5_3:54488178-54488197	None:intergenic	30.0%
!!!	TATTTTTAGAACAAAAGGGG+TGG	+	chr5_3:54488226-54488245	Msa0818550:intron	30.0%
	TCACAATTCAGACTCAATTA+AGG	-	chr5_3:54488404-54488423	None:intergenic	30.0%
	GATTGAACTGAATCAAAAAG+TGG	+	chr5_3:54488582-54488601	Msa0818550:intron	30.0%
	ATTATGATATACCCAAAGGA+AGG	+	chr5_3:54488854-54488873	Msa0818550:intron	30.0%
	TTATGATATACCCAAAGGAA+GGG	+	chr5_3:54488855-54488874	Msa0818550:intron	30.0%
	AGAAACATGGTCACAATTAA+GGG	-	chr5_3:54488948-54488967	None:intergenic	30.0%
	AAGAAACATGGTCACAATTA+AGG	-	chr5_3:54488949-54488968	None:intergenic	30.0%
	ACAAAACTAGTAATTAGAGG+GGG	-	chr5_3:54489060-54489079	None:intergenic	30.0%
	TCTTATCTTTATTGCAGCAA+TGG	+	chr5_3:54489203-54489222	Msa0818550:intron	30.0%
!!	AAGACATGTTTGTTGAGTTT+TGG	+	chr5_3:54489284-54489303	Msa0818550:intron	30.0%
	CATACGTAAAGTTAAGAGAA+AGG	-	chr5_3:54489377-54489396	None:intergenic	30.0%
!!	GTTAACACTTTAAAATGCAG+AGG	-	chr5_3:54489735-54489754	None:intergenic	30.0%
	CAGATACAAATGACTAAAGT+GGG	-	chr5_3:54489851-54489870	None:intergenic	30.0%
	ACAGATACAAATGACTAAAG+TGG	-	chr5_3:54489852-54489871	None:intergenic	30.0%
!	TATTGACTAGAACTAGTAGT+TGG	+	chr5_3:54489894-54489913	Msa0818550:three_prime_UTR	30.0%
	ACATAAACTTTATTAAGGCG+TGG	-	chr5_3:54489927-54489946	None:intergenic	30.0%
	ACGCCTTAATAAAGTTTATG+TGG	+	chr5_3:54489926-54489945	Msa0818550:three_prime_UTR	30.0%
	CGCCTTAATAAAGTTTATGT+GGG	+	chr5_3:54489927-54489946	Msa0818550:three_prime_UTR	30.0%
!!	AAGTTTATGTGGGTTGTTTT+TGG	+	chr5_3:54489937-54489956	Msa0818550:three_prime_UTR	30.0%
	TTTACTTAGTAGTTGATCCA+TGG	+	chr5_3:54489977-54489996	Msa0818550:three_prime_UTR	30.0%
!!!	GATCTAATGGTTGTTTTAAG+TGG	-	chr5_3:54490304-54490323	None:intergenic	30.0%
	ATTGAGACTACTTGATCTAA+TGG	-	chr5_3:54490317-54490336	None:intergenic	30.0%
!	CAAGAATAGTTCCAACTTTT+TGG	-	chr5_3:54490587-54490606	None:intergenic	30.0%
!	ATTGTAGCTTTTACACAAAC+AGG	-	chr5_3:54490738-54490757	None:intergenic	30.0%
	ATGTAAGAGAAGATTGAAGT+TGG	+	chr5_3:54490859-54490878	Msa0818550:three_prime_UTR	30.0%
!	TAAATTACTTTCAAGTCGGA+TGG	+	chr5_3:54490883-54490902	Msa0818550:three_prime_UTR	30.0%
!	AAATTACTTTCAAGTCGGAT+GGG	+	chr5_3:54490884-54490903	Msa0818550:three_prime_UTR	30.0%
	TGAAACTGAAAATGTTGGAT+CGG	-	chr5_3:54486857-54486876	None:intergenic	30.0%
!!!	AACAATAACCGTGTTTTAAC+CGG	+	chr5_3:54487073-54487092	Msa0818550:CDS	30.0%
	AAAAGGTTCAAACAAAACAC+CGG	-	chr5_3:54487095-54487114	None:intergenic	30.0%
!!	TTTGTTTGAACCTTTTGAAG+AGG	+	chr5_3:54487099-54487118	Msa0818550:CDS	30.0%
!!	ACCTTTTGAAGAGGTTAAAA+AGG	+	chr5_3:54487108-54487127	Msa0818550:CDS	30.0%
!	TCCTTTTTAACCTCTTCAAA+AGG	-	chr5_3:54487112-54487131	None:intergenic	30.0%
	AAAGAATCTTGAGGAACAAT+AGG	-	chr5_3:54487148-54487167	None:intergenic	30.0%
!!	TTTGTTGTTGTTGTTGTTGT+TGG	+	chr5_3:54487306-54487325	Msa0818550:intron	30.0%
!!	TTTTAAGGAATCTAGTGAAG+AGG	+	chr5_3:54487545-54487564	Msa0818550:CDS	30.0%
	TGAGAAATTGATGGAATATC+AGG	+	chr5_3:54487581-54487600	Msa0818550:CDS	30.0%
	TTGACACCAATAGTAATCTA+AGG	+	chr5_3:54487735-54487754	Msa0818550:intron	30.0%
	ACGTTTCCTTAGATTACTAT+TGG	-	chr5_3:54487744-54487763	None:intergenic	30.0%
!!	CCTTTGAAGTGTTAGATAAT+AGG	-	chr5_3:54487975-54487994	None:intergenic	30.0%
	CCTATTATCTAACACTTCAA+AGG	+	chr5_3:54487972-54487991	Msa0818550:intron	30.0%
!	TGTTAATCAACTGTTAGCTT+TGG	+	chr5_3:54488015-54488034	Msa0818550:intron	30.0%
	CTTTGGTTACTAGATCAATA+AGG	+	chr5_3:54488032-54488051	Msa0818550:intron	30.0%
	AAATTCGACGACTTTCTAAT+CGG	-	chr5_3:54488098-54488117	None:intergenic	30.0%
	TCACAAGATAACTACCAATA+AGG	-	chr5_3:54488178-54488197	None:intergenic	30.0%
!!!	TATTTTTAGAACAAAAGGGG+TGG	+	chr5_3:54488226-54488245	Msa0818550:intron	30.0%
	TCACAATTCAGACTCAATTA+AGG	-	chr5_3:54488404-54488423	None:intergenic	30.0%
	GATTGAACTGAATCAAAAAG+TGG	+	chr5_3:54488582-54488601	Msa0818550:intron	30.0%
	ATTATGATATACCCAAAGGA+AGG	+	chr5_3:54488854-54488873	Msa0818550:intron	30.0%
	TTATGATATACCCAAAGGAA+GGG	+	chr5_3:54488855-54488874	Msa0818550:intron	30.0%
	AGAAACATGGTCACAATTAA+GGG	-	chr5_3:54488948-54488967	None:intergenic	30.0%
	AAGAAACATGGTCACAATTA+AGG	-	chr5_3:54488949-54488968	None:intergenic	30.0%
	ACAAAACTAGTAATTAGAGG+GGG	-	chr5_3:54489060-54489079	None:intergenic	30.0%
	TCTTATCTTTATTGCAGCAA+TGG	+	chr5_3:54489203-54489222	Msa0818550:intron	30.0%
!!	AAGACATGTTTGTTGAGTTT+TGG	+	chr5_3:54489284-54489303	Msa0818550:intron	30.0%
	CATACGTAAAGTTAAGAGAA+AGG	-	chr5_3:54489377-54489396	None:intergenic	30.0%
!!	GTTAACACTTTAAAATGCAG+AGG	-	chr5_3:54489735-54489754	None:intergenic	30.0%
	CAGATACAAATGACTAAAGT+GGG	-	chr5_3:54489851-54489870	None:intergenic	30.0%
	ACAGATACAAATGACTAAAG+TGG	-	chr5_3:54489852-54489871	None:intergenic	30.0%
!	TATTGACTAGAACTAGTAGT+TGG	+	chr5_3:54489894-54489913	Msa0818550:three_prime_UTR	30.0%
	ACATAAACTTTATTAAGGCG+TGG	-	chr5_3:54489927-54489946	None:intergenic	30.0%
	ACGCCTTAATAAAGTTTATG+TGG	+	chr5_3:54489926-54489945	Msa0818550:three_prime_UTR	30.0%
	CGCCTTAATAAAGTTTATGT+GGG	+	chr5_3:54489927-54489946	Msa0818550:three_prime_UTR	30.0%
!!	AAGTTTATGTGGGTTGTTTT+TGG	+	chr5_3:54489937-54489956	Msa0818550:three_prime_UTR	30.0%
	TTTACTTAGTAGTTGATCCA+TGG	+	chr5_3:54489977-54489996	Msa0818550:three_prime_UTR	30.0%
!!!	GATCTAATGGTTGTTTTAAG+TGG	-	chr5_3:54490304-54490323	None:intergenic	30.0%
	ATTGAGACTACTTGATCTAA+TGG	-	chr5_3:54490317-54490336	None:intergenic	30.0%
!	CAAGAATAGTTCCAACTTTT+TGG	-	chr5_3:54490587-54490606	None:intergenic	30.0%
!	ATTGTAGCTTTTACACAAAC+AGG	-	chr5_3:54490738-54490757	None:intergenic	30.0%
	ATGTAAGAGAAGATTGAAGT+TGG	+	chr5_3:54490859-54490878	Msa0818550:three_prime_UTR	30.0%
!	TAAATTACTTTCAAGTCGGA+TGG	+	chr5_3:54490883-54490902	Msa0818550:three_prime_UTR	30.0%
!	AAATTACTTTCAAGTCGGAT+GGG	+	chr5_3:54490884-54490903	Msa0818550:three_prime_UTR	30.0%
	GAAACTGAAAATGTTGGATC+GGG	-	chr5_3:54486856-54486875	None:intergenic	35.0%
!	GATTTTGCACAGAACGAAAA+TGG	-	chr5_3:54486920-54486939	None:intergenic	35.0%
!	ACAAAACACCGGTTAAAACA+CGG	-	chr5_3:54487084-54487103	None:intergenic	35.0%
	AATCTAGTGAAGAGGAAAGA+GGG	+	chr5_3:54487553-54487572	Msa0818550:CDS	35.0%
	TAATTAATGCCCATGAAGCA+CGG	+	chr5_3:54487675-54487694	Msa0818550:intron	35.0%
!!	TACTATTGGTGTCAATGTGT+CGG	-	chr5_3:54487730-54487749	None:intergenic	35.0%
	AACACTTCAAAGGTTAACAC+AGG	+	chr5_3:54487982-54488001	Msa0818550:intron	35.0%
!!!	GCACGGTTAGTTTCTTTTTT+TGG	+	chr5_3:54488318-54488337	Msa0818550:intron	35.0%
	AATTCAGACTCAATTAAGGC+AGG	-	chr5_3:54488400-54488419	None:intergenic	35.0%
!	TGTGATGTGTGTGGATTTTA+TGG	+	chr5_3:54488419-54488438	Msa0818550:intron	35.0%
	AATTGATGAATTTGTGGGCT+TGG	+	chr5_3:54488496-54488515	Msa0818550:intron	35.0%
!!	TTTTTCAGATCACGCTTTCT+TGG	-	chr5_3:54488627-54488646	None:intergenic	35.0%
!!	TTTCATCAAGTTGAGATTGC+TGG	+	chr5_3:54488706-54488725	Msa0818550:intron	35.0%
	TATGAGACAGAAACCAAACT+GGG	+	chr5_3:54488739-54488758	Msa0818550:intron	35.0%
!!	ATCATTACTGATTCCCAGTT+TGG	-	chr5_3:54488755-54488774	None:intergenic	35.0%
	TATGATATACCCAAAGGAAG+GGG	+	chr5_3:54488856-54488875	Msa0818550:intron	35.0%
	ATGATAAATCCCCTTCCTTT+GGG	-	chr5_3:54488868-54488887	None:intergenic	35.0%
	AATGATAAATCCCCTTCCTT+TGG	-	chr5_3:54488869-54488888	None:intergenic	35.0%
	GGAAGGGGATTTATCATTTA+TGG	+	chr5_3:54488871-54488890	Msa0818550:intron	35.0%
	AACAGGGAATCACGATATTA+AGG	-	chr5_3:54488902-54488921	None:intergenic	35.0%
	TAATATCGTGATTCCCTGTT+TGG	+	chr5_3:54488902-54488921	Msa0818550:intron	35.0%
	AATCATTAAGATGTTTGCCC+TGG	+	chr5_3:54488971-54488990	Msa0818550:intron	35.0%
	ACAAAATATTTCGGATGCCA+GGG	-	chr5_3:54488991-54489010	None:intergenic	35.0%
	TACAAAATATTTCGGATGCC+AGG	-	chr5_3:54488992-54489011	None:intergenic	35.0%
	GAAAATCCAATCATCCAATC+AGG	-	chr5_3:54489163-54489182	None:intergenic	35.0%
	AAACATGTCTTACATTGTGC+AGG	-	chr5_3:54489275-54489294	None:intergenic	35.0%
!	CTTTACGTATGTTTTTCCAC+AGG	+	chr5_3:54489386-54489405	Msa0818550:intron	35.0%
!	TTTGTGGAAAGCGAGTTTTT+GGG	+	chr5_3:54489444-54489463	Msa0818550:CDS	35.0%
	AGACACCTGAAATTACATCA+AGG	-	chr5_3:54489769-54489788	None:intergenic	35.0%
!	TTGATGTAATTTCAGGTGTC+TGG	+	chr5_3:54489768-54489787	Msa0818550:intron	35.0%
	TTCTTAGATTCACTAGTGCT+TGG	-	chr5_3:54490059-54490078	None:intergenic	35.0%
!!	GCAAGTGTTTTTGATCATGA+TGG	+	chr5_3:54490277-54490296	Msa0818550:three_prime_UTR	35.0%
	CAAGATAACGAAAGAGAATG+AGG	-	chr5_3:54490365-54490384	None:intergenic	35.0%
	ACTTGAATACTTTAGGTGTC+AGG	-	chr5_3:54490504-54490523	None:intergenic	35.0%
!	ACCTAAAGTATTCAAGTCCT+GGG	+	chr5_3:54490507-54490526	Msa0818550:three_prime_UTR	35.0%
	TTGTTCCTATTTGTGGAATG+TGG	-	chr5_3:54490545-54490564	None:intergenic	35.0%
!	TCAGTTGTTGTTCCTATTTG+TGG	-	chr5_3:54490552-54490571	None:intergenic	35.0%
	AAAGTGAAGAGCCAAAAAGT+TGG	+	chr5_3:54490573-54490592	Msa0818550:intron	35.0%
!	TCCTCATTCTAAGAAGACAA+TGG	+	chr5_3:54490691-54490710	Msa0818550:three_prime_UTR	35.0%
	ACCATTGTCTTCTTAGAATG+AGG	-	chr5_3:54490695-54490714	None:intergenic	35.0%
	TGAATCACACAATCACTCTT+TGG	-	chr5_3:54490780-54490799	None:intergenic	35.0%
	TGATTGTGTGATTCACAACA+CGG	+	chr5_3:54490785-54490804	Msa0818550:three_prime_UTR	35.0%
	GAAACTGAAAATGTTGGATC+GGG	-	chr5_3:54486856-54486875	None:intergenic	35.0%
!	GATTTTGCACAGAACGAAAA+TGG	-	chr5_3:54486920-54486939	None:intergenic	35.0%
!	ACAAAACACCGGTTAAAACA+CGG	-	chr5_3:54487084-54487103	None:intergenic	35.0%
	AATCTAGTGAAGAGGAAAGA+GGG	+	chr5_3:54487553-54487572	Msa0818550:CDS	35.0%
	TAATTAATGCCCATGAAGCA+CGG	+	chr5_3:54487675-54487694	Msa0818550:intron	35.0%
!!	TACTATTGGTGTCAATGTGT+CGG	-	chr5_3:54487730-54487749	None:intergenic	35.0%
	AACACTTCAAAGGTTAACAC+AGG	+	chr5_3:54487982-54488001	Msa0818550:intron	35.0%
!!!	GCACGGTTAGTTTCTTTTTT+TGG	+	chr5_3:54488318-54488337	Msa0818550:intron	35.0%
	AATTCAGACTCAATTAAGGC+AGG	-	chr5_3:54488400-54488419	None:intergenic	35.0%
!	TGTGATGTGTGTGGATTTTA+TGG	+	chr5_3:54488419-54488438	Msa0818550:intron	35.0%
	AATTGATGAATTTGTGGGCT+TGG	+	chr5_3:54488496-54488515	Msa0818550:intron	35.0%
!!	TTTTTCAGATCACGCTTTCT+TGG	-	chr5_3:54488627-54488646	None:intergenic	35.0%
!!	TTTCATCAAGTTGAGATTGC+TGG	+	chr5_3:54488706-54488725	Msa0818550:intron	35.0%
	TATGAGACAGAAACCAAACT+GGG	+	chr5_3:54488739-54488758	Msa0818550:intron	35.0%
!!	ATCATTACTGATTCCCAGTT+TGG	-	chr5_3:54488755-54488774	None:intergenic	35.0%
	TATGATATACCCAAAGGAAG+GGG	+	chr5_3:54488856-54488875	Msa0818550:intron	35.0%
	ATGATAAATCCCCTTCCTTT+GGG	-	chr5_3:54488868-54488887	None:intergenic	35.0%
	AATGATAAATCCCCTTCCTT+TGG	-	chr5_3:54488869-54488888	None:intergenic	35.0%
	GGAAGGGGATTTATCATTTA+TGG	+	chr5_3:54488871-54488890	Msa0818550:intron	35.0%
	AACAGGGAATCACGATATTA+AGG	-	chr5_3:54488902-54488921	None:intergenic	35.0%
	TAATATCGTGATTCCCTGTT+TGG	+	chr5_3:54488902-54488921	Msa0818550:intron	35.0%
	AATCATTAAGATGTTTGCCC+TGG	+	chr5_3:54488971-54488990	Msa0818550:intron	35.0%
	ACAAAATATTTCGGATGCCA+GGG	-	chr5_3:54488991-54489010	None:intergenic	35.0%
	TACAAAATATTTCGGATGCC+AGG	-	chr5_3:54488992-54489011	None:intergenic	35.0%
	GAAAATCCAATCATCCAATC+AGG	-	chr5_3:54489163-54489182	None:intergenic	35.0%
	AAACATGTCTTACATTGTGC+AGG	-	chr5_3:54489275-54489294	None:intergenic	35.0%
!	CTTTACGTATGTTTTTCCAC+AGG	+	chr5_3:54489386-54489405	Msa0818550:intron	35.0%
!	TTTGTGGAAAGCGAGTTTTT+GGG	+	chr5_3:54489444-54489463	Msa0818550:CDS	35.0%
	AGACACCTGAAATTACATCA+AGG	-	chr5_3:54489769-54489788	None:intergenic	35.0%
!	TTGATGTAATTTCAGGTGTC+TGG	+	chr5_3:54489768-54489787	Msa0818550:intron	35.0%
	TTCTTAGATTCACTAGTGCT+TGG	-	chr5_3:54490059-54490078	None:intergenic	35.0%
!!	GCAAGTGTTTTTGATCATGA+TGG	+	chr5_3:54490277-54490296	Msa0818550:three_prime_UTR	35.0%
	CAAGATAACGAAAGAGAATG+AGG	-	chr5_3:54490365-54490384	None:intergenic	35.0%
	ACTTGAATACTTTAGGTGTC+AGG	-	chr5_3:54490504-54490523	None:intergenic	35.0%
!	ACCTAAAGTATTCAAGTCCT+GGG	+	chr5_3:54490507-54490526	Msa0818550:three_prime_UTR	35.0%
	TTGTTCCTATTTGTGGAATG+TGG	-	chr5_3:54490545-54490564	None:intergenic	35.0%
!	TCAGTTGTTGTTCCTATTTG+TGG	-	chr5_3:54490552-54490571	None:intergenic	35.0%
	AAAGTGAAGAGCCAAAAAGT+TGG	+	chr5_3:54490573-54490592	Msa0818550:intron	35.0%
!	TCCTCATTCTAAGAAGACAA+TGG	+	chr5_3:54490691-54490710	Msa0818550:three_prime_UTR	35.0%
	ACCATTGTCTTCTTAGAATG+AGG	-	chr5_3:54490695-54490714	None:intergenic	35.0%
	TGAATCACACAATCACTCTT+TGG	-	chr5_3:54490780-54490799	None:intergenic	35.0%
	TGATTGTGTGATTCACAACA+CGG	+	chr5_3:54490785-54490804	Msa0818550:three_prime_UTR	35.0%
	CAGAACGAAAATGGAGAGAA+AGG	-	chr5_3:54486911-54486930	None:intergenic	40.0%
!!	AGCTTTGAGAAGCATGGTTA+GGG	-	chr5_3:54486942-54486961	None:intergenic	40.0%
	TTACTTCCACGTTGAAGCAA+CGG	-	chr5_3:54487016-54487035	None:intergenic	40.0%
	GCTTCAACGTGGAAGTAAAT+TGG	+	chr5_3:54487018-54487037	Msa0818550:CDS	40.0%
	TGACGAGCTAAAGAATCTTG+AGG	-	chr5_3:54487157-54487176	None:intergenic	40.0%
	AGAGATAATGTTGCGCTGAA+AGG	+	chr5_3:54487391-54487410	Msa0818550:CDS	40.0%
	GAATCTAGTGAAGAGGAAAG+AGG	+	chr5_3:54487552-54487571	Msa0818550:CDS	40.0%
	GTTAATGCAGTTCGTACACA+TGG	-	chr5_3:54488076-54488095	None:intergenic	40.0%
	TGAGTTTGATCATGCCGATA+AGG	+	chr5_3:54488285-54488304	Msa0818550:CDS	40.0%
	GAGTTTGATCATGCCGATAA+GGG	+	chr5_3:54488286-54488305	Msa0818550:CDS	40.0%
	AGTCTGAATTGTGATGTGTG+TGG	+	chr5_3:54488410-54488429	Msa0818550:intron	40.0%
!!	TTTCATCAAGTTGAGCTTGC+TGG	+	chr5_3:54488677-54488696	Msa0818550:intron	40.0%
	CTATGAGACAGAAACCAAAC+TGG	+	chr5_3:54488738-54488757	Msa0818550:intron	40.0%
	CTGGTATCCAATTCCAAACA+GGG	-	chr5_3:54488918-54488937	None:intergenic	40.0%
	ACATGGTCACAATTAAGGGA+TGG	-	chr5_3:54488944-54488963	None:intergenic	40.0%
	GCAATGAGTAACACAAGATG+TGG	+	chr5_3:54489121-54489140	Msa0818550:intron	40.0%
	GTCACATTGTACTACCTGAT+TGG	+	chr5_3:54489146-54489165	Msa0818550:intron	40.0%
	GTACTACCTGATTGGATGAT+TGG	+	chr5_3:54489154-54489173	Msa0818550:intron	40.0%
	AATGGAACTTGCATTGTCCT+TGG	+	chr5_3:54489221-54489240	Msa0818550:CDS	40.0%
!	CTCATTTGTTAGCTTCTCCA+AGG	-	chr5_3:54489241-54489260	None:intergenic	40.0%
	GTCTTACATTGTGCAGGTTA+AGG	-	chr5_3:54489269-54489288	None:intergenic	40.0%
!!!	GTTTGTTGAGTTTTGGTGTC+TGG	+	chr5_3:54489291-54489310	Msa0818550:intron	40.0%
!!!	GAGTTTTGGTGTCTGGTTTA+CGG	+	chr5_3:54489298-54489317	Msa0818550:intron	40.0%
!!!	AGTTTTGGTGTCTGGTTTAC+GGG	+	chr5_3:54489299-54489318	Msa0818550:intron	40.0%
	AAAGACCGGTGATGTGAATT+TGG	+	chr5_3:54489416-54489435	Msa0818550:CDS	40.0%
	TGTGAATTTGGCAGACTTTG+TGG	+	chr5_3:54489428-54489447	Msa0818550:CDS	40.0%
!	CTTTGTGGAAAGCGAGTTTT+TGG	+	chr5_3:54489443-54489462	Msa0818550:CDS	40.0%
	TCTTAGCTGAGCAACATACT+CGG	-	chr5_3:54489631-54489650	None:intergenic	40.0%
	GGCTTCCTTGATGTAATTTC+AGG	+	chr5_3:54489761-54489780	Msa0818550:intron	40.0%
	ACTTAGTAGTTGATCCATGG+TGG	+	chr5_3:54489980-54489999	Msa0818550:three_prime_UTR	40.0%
	AGAAGAAAAACGAACCACCA+TGG	-	chr5_3:54489997-54490016	None:intergenic	40.0%
	TTAGATTCACTAGTGCTTGG+TGG	-	chr5_3:54490056-54490075	None:intergenic	40.0%
!!!	ACCAAGTGCACGTCTTTTTT+TGG	+	chr5_3:54490110-54490129	Msa0818550:three_prime_UTR	40.0%
!!!	ACGTCTTTTTTTGGCATAGC+AGG	+	chr5_3:54490119-54490138	Msa0818550:three_prime_UTR	40.0%
!!!	CGTCTTTTTTTGGCATAGCA+GGG	+	chr5_3:54490120-54490139	Msa0818550:three_prime_UTR	40.0%
	AATGGCTTTCGAGATACAGA+AGG	+	chr5_3:54490219-54490238	Msa0818550:three_prime_UTR	40.0%
	ATGGCTTTCGAGATACAGAA+GGG	+	chr5_3:54490220-54490239	Msa0818550:three_prime_UTR	40.0%
!!	AGAAGGGCACTATTGTACAT+TGG	+	chr5_3:54490236-54490255	Msa0818550:three_prime_UTR	40.0%
!!	GAAGGGCACTATTGTACATT+GGG	+	chr5_3:54490237-54490256	Msa0818550:three_prime_UTR	40.0%
!!	AAGGGCACTATTGTACATTG+GGG	+	chr5_3:54490238-54490257	Msa0818550:three_prime_UTR	40.0%
	TATTGTACATTGGGGAGCTT+AGG	+	chr5_3:54490246-54490265	Msa0818550:three_prime_UTR	40.0%
	TGCTCTTCATGCTATGAAAG+AGG	+	chr5_3:54490477-54490496	Msa0818550:three_prime_UTR	40.0%
!	CACCTAAAGTATTCAAGTCC+TGG	+	chr5_3:54490506-54490525	Msa0818550:three_prime_UTR	40.0%
	ACCCAGGACTTGAATACTTT+AGG	-	chr5_3:54490511-54490530	None:intergenic	40.0%
	TGCAACCACATTCCACAAAT+AGG	+	chr5_3:54490537-54490556	Msa0818550:three_prime_UTR	40.0%
	CACACAATCACTCTTTGGAT+TGG	-	chr5_3:54490775-54490794	None:intergenic	40.0%
	GATTGTGTGATTCACAACAC+GGG	+	chr5_3:54490786-54490805	Msa0818550:three_prime_UTR	40.0%
	CAGAACGAAAATGGAGAGAA+AGG	-	chr5_3:54486911-54486930	None:intergenic	40.0%
!!	AGCTTTGAGAAGCATGGTTA+GGG	-	chr5_3:54486942-54486961	None:intergenic	40.0%
	TTACTTCCACGTTGAAGCAA+CGG	-	chr5_3:54487016-54487035	None:intergenic	40.0%
	GCTTCAACGTGGAAGTAAAT+TGG	+	chr5_3:54487018-54487037	Msa0818550:CDS	40.0%
	TGACGAGCTAAAGAATCTTG+AGG	-	chr5_3:54487157-54487176	None:intergenic	40.0%
	AGAGATAATGTTGCGCTGAA+AGG	+	chr5_3:54487391-54487410	Msa0818550:CDS	40.0%
	GAATCTAGTGAAGAGGAAAG+AGG	+	chr5_3:54487552-54487571	Msa0818550:CDS	40.0%
	GTTAATGCAGTTCGTACACA+TGG	-	chr5_3:54488076-54488095	None:intergenic	40.0%
	TGAGTTTGATCATGCCGATA+AGG	+	chr5_3:54488285-54488304	Msa0818550:CDS	40.0%
	GAGTTTGATCATGCCGATAA+GGG	+	chr5_3:54488286-54488305	Msa0818550:CDS	40.0%
	AGTCTGAATTGTGATGTGTG+TGG	+	chr5_3:54488410-54488429	Msa0818550:intron	40.0%
!!	TTTCATCAAGTTGAGCTTGC+TGG	+	chr5_3:54488677-54488696	Msa0818550:intron	40.0%
	CTATGAGACAGAAACCAAAC+TGG	+	chr5_3:54488738-54488757	Msa0818550:intron	40.0%
	CTGGTATCCAATTCCAAACA+GGG	-	chr5_3:54488918-54488937	None:intergenic	40.0%
	ACATGGTCACAATTAAGGGA+TGG	-	chr5_3:54488944-54488963	None:intergenic	40.0%
	GCAATGAGTAACACAAGATG+TGG	+	chr5_3:54489121-54489140	Msa0818550:intron	40.0%
	GTCACATTGTACTACCTGAT+TGG	+	chr5_3:54489146-54489165	Msa0818550:intron	40.0%
	GTACTACCTGATTGGATGAT+TGG	+	chr5_3:54489154-54489173	Msa0818550:intron	40.0%
	AATGGAACTTGCATTGTCCT+TGG	+	chr5_3:54489221-54489240	Msa0818550:CDS	40.0%
!	CTCATTTGTTAGCTTCTCCA+AGG	-	chr5_3:54489241-54489260	None:intergenic	40.0%
	GTCTTACATTGTGCAGGTTA+AGG	-	chr5_3:54489269-54489288	None:intergenic	40.0%
!!!	GTTTGTTGAGTTTTGGTGTC+TGG	+	chr5_3:54489291-54489310	Msa0818550:intron	40.0%
!!!	GAGTTTTGGTGTCTGGTTTA+CGG	+	chr5_3:54489298-54489317	Msa0818550:intron	40.0%
!!!	AGTTTTGGTGTCTGGTTTAC+GGG	+	chr5_3:54489299-54489318	Msa0818550:intron	40.0%
	AAAGACCGGTGATGTGAATT+TGG	+	chr5_3:54489416-54489435	Msa0818550:CDS	40.0%
	TGTGAATTTGGCAGACTTTG+TGG	+	chr5_3:54489428-54489447	Msa0818550:CDS	40.0%
!	CTTTGTGGAAAGCGAGTTTT+TGG	+	chr5_3:54489443-54489462	Msa0818550:CDS	40.0%
	TCTTAGCTGAGCAACATACT+CGG	-	chr5_3:54489631-54489650	None:intergenic	40.0%
	GGCTTCCTTGATGTAATTTC+AGG	+	chr5_3:54489761-54489780	Msa0818550:intron	40.0%
	ACTTAGTAGTTGATCCATGG+TGG	+	chr5_3:54489980-54489999	Msa0818550:three_prime_UTR	40.0%
	AGAAGAAAAACGAACCACCA+TGG	-	chr5_3:54489997-54490016	None:intergenic	40.0%
	TTAGATTCACTAGTGCTTGG+TGG	-	chr5_3:54490056-54490075	None:intergenic	40.0%
!!!	ACCAAGTGCACGTCTTTTTT+TGG	+	chr5_3:54490110-54490129	Msa0818550:three_prime_UTR	40.0%
!!!	ACGTCTTTTTTTGGCATAGC+AGG	+	chr5_3:54490119-54490138	Msa0818550:three_prime_UTR	40.0%
!!!	CGTCTTTTTTTGGCATAGCA+GGG	+	chr5_3:54490120-54490139	Msa0818550:three_prime_UTR	40.0%
	AATGGCTTTCGAGATACAGA+AGG	+	chr5_3:54490219-54490238	Msa0818550:three_prime_UTR	40.0%
	ATGGCTTTCGAGATACAGAA+GGG	+	chr5_3:54490220-54490239	Msa0818550:three_prime_UTR	40.0%
!!	AGAAGGGCACTATTGTACAT+TGG	+	chr5_3:54490236-54490255	Msa0818550:three_prime_UTR	40.0%
!!	GAAGGGCACTATTGTACATT+GGG	+	chr5_3:54490237-54490256	Msa0818550:three_prime_UTR	40.0%
!!	AAGGGCACTATTGTACATTG+GGG	+	chr5_3:54490238-54490257	Msa0818550:three_prime_UTR	40.0%
	TATTGTACATTGGGGAGCTT+AGG	+	chr5_3:54490246-54490265	Msa0818550:three_prime_UTR	40.0%
	TGCTCTTCATGCTATGAAAG+AGG	+	chr5_3:54490477-54490496	Msa0818550:three_prime_UTR	40.0%
!	CACCTAAAGTATTCAAGTCC+TGG	+	chr5_3:54490506-54490525	Msa0818550:three_prime_UTR	40.0%
	ACCCAGGACTTGAATACTTT+AGG	-	chr5_3:54490511-54490530	None:intergenic	40.0%
	TGCAACCACATTCCACAAAT+AGG	+	chr5_3:54490537-54490556	Msa0818550:three_prime_UTR	40.0%
	CACACAATCACTCTTTGGAT+TGG	-	chr5_3:54490775-54490794	None:intergenic	40.0%
	GATTGTGTGATTCACAACAC+GGG	+	chr5_3:54490786-54490805	Msa0818550:three_prime_UTR	40.0%
!!	CAGCTTTGAGAAGCATGGTT+AGG	-	chr5_3:54486943-54486962	None:intergenic	45.0%
!!	TACAGCAGCTTTGAGAAGCA+TGG	-	chr5_3:54486948-54486967	None:intergenic	45.0%
!	CGGAATCAAACGCGTGTTTT+CGG	-	chr5_3:54486996-54487015	None:intergenic	45.0%
	TTGATTCCGTTGCTTCAACG+TGG	+	chr5_3:54487007-54487026	Msa0818550:CDS	45.0%
	TCGTAGCAGAAACAGCGATT+CGG	-	chr5_3:54487045-54487064	None:intergenic	45.0%
!!	ATCGCTGTTTCTGCTACGAA+AGG	+	chr5_3:54487046-54487065	Msa0818550:CDS	45.0%
!!	GTTGTTGGTGTTGAACAGTG+TGG	+	chr5_3:54487321-54487340	Msa0818550:intron	45.0%
	AGGGCATGCTGAGAAATTGA+TGG	+	chr5_3:54487572-54487591	Msa0818550:CDS	45.0%
	TGTATGTGTCCGTGCTTCAT+GGG	-	chr5_3:54487687-54487706	None:intergenic	45.0%
	ATGAAGCACGGACACATACA+CGG	+	chr5_3:54487687-54487706	Msa0818550:intron	45.0%
	ACGTCGTAAACTCTGACACT+TGG	+	chr5_3:54487760-54487779	Msa0818550:intron	45.0%
	AAACTCTGACACTTGGACAC+AGG	+	chr5_3:54487767-54487786	Msa0818550:intron	45.0%
	GGTTATTGGGCTTGTGCTAT+TGG	-	chr5_3:54487954-54487973	None:intergenic	45.0%
	GCATGATCAAACTCAGAGAG+CGG	-	chr5_3:54488280-54488299	None:intergenic	45.0%
!	CGTGATTCCCTGTTTGGAAT+TGG	+	chr5_3:54488908-54488927	Msa0818550:intron	45.0%
	CCTGGTATCCAATTCCAAAC+AGG	-	chr5_3:54488919-54488938	None:intergenic	45.0%
!	CCTGTTTGGAATTGGATACC+AGG	+	chr5_3:54488916-54488935	Msa0818550:intron	45.0%
	ATTCACATCACCGGTCTTTG+AGG	-	chr5_3:54489415-54489434	None:intergenic	45.0%
	GTCTGCCAAATTCACATCAC+CGG	-	chr5_3:54489424-54489443	None:intergenic	45.0%
!!!	AAGCGAGTTTTTGGGTGAAC+AGG	+	chr5_3:54489452-54489471	Msa0818550:CDS	45.0%
	GTTGCTCAGCTAAGAAGAGT+TGG	+	chr5_3:54489636-54489655	Msa0818550:CDS	45.0%
	CAGCTAAGAAGAGTTGGCAA+AGG	+	chr5_3:54489642-54489661	Msa0818550:CDS	45.0%
	AGAAGAGTTGGCAAAGGACA+TGG	+	chr5_3:54489648-54489667	Msa0818550:CDS	45.0%
	GCCAAAAAAAGACGTGCACT+TGG	-	chr5_3:54490114-54490133	None:intergenic	45.0%
	GATGGGACATGCGTCATATA+CGG	+	chr5_3:54490901-54490920	Msa0818550:three_prime_UTR	45.0%
!!	CAGCTTTGAGAAGCATGGTT+AGG	-	chr5_3:54486943-54486962	None:intergenic	45.0%
!!	TACAGCAGCTTTGAGAAGCA+TGG	-	chr5_3:54486948-54486967	None:intergenic	45.0%
!	CGGAATCAAACGCGTGTTTT+CGG	-	chr5_3:54486996-54487015	None:intergenic	45.0%
	TTGATTCCGTTGCTTCAACG+TGG	+	chr5_3:54487007-54487026	Msa0818550:CDS	45.0%
	TCGTAGCAGAAACAGCGATT+CGG	-	chr5_3:54487045-54487064	None:intergenic	45.0%
!!	ATCGCTGTTTCTGCTACGAA+AGG	+	chr5_3:54487046-54487065	Msa0818550:CDS	45.0%
!!	GTTGTTGGTGTTGAACAGTG+TGG	+	chr5_3:54487321-54487340	Msa0818550:intron	45.0%
	AGGGCATGCTGAGAAATTGA+TGG	+	chr5_3:54487572-54487591	Msa0818550:CDS	45.0%
	TGTATGTGTCCGTGCTTCAT+GGG	-	chr5_3:54487687-54487706	None:intergenic	45.0%
	ATGAAGCACGGACACATACA+CGG	+	chr5_3:54487687-54487706	Msa0818550:intron	45.0%
	ACGTCGTAAACTCTGACACT+TGG	+	chr5_3:54487760-54487779	Msa0818550:intron	45.0%
	AAACTCTGACACTTGGACAC+AGG	+	chr5_3:54487767-54487786	Msa0818550:intron	45.0%
	GGTTATTGGGCTTGTGCTAT+TGG	-	chr5_3:54487954-54487973	None:intergenic	45.0%
	GCATGATCAAACTCAGAGAG+CGG	-	chr5_3:54488280-54488299	None:intergenic	45.0%
!	CGTGATTCCCTGTTTGGAAT+TGG	+	chr5_3:54488908-54488927	Msa0818550:intron	45.0%
	CCTGGTATCCAATTCCAAAC+AGG	-	chr5_3:54488919-54488938	None:intergenic	45.0%
!	CCTGTTTGGAATTGGATACC+AGG	+	chr5_3:54488916-54488935	Msa0818550:intron	45.0%
	ATTCACATCACCGGTCTTTG+AGG	-	chr5_3:54489415-54489434	None:intergenic	45.0%
	GTCTGCCAAATTCACATCAC+CGG	-	chr5_3:54489424-54489443	None:intergenic	45.0%
!!!	AAGCGAGTTTTTGGGTGAAC+AGG	+	chr5_3:54489452-54489471	Msa0818550:CDS	45.0%
	GTTGCTCAGCTAAGAAGAGT+TGG	+	chr5_3:54489636-54489655	Msa0818550:CDS	45.0%
	CAGCTAAGAAGAGTTGGCAA+AGG	+	chr5_3:54489642-54489661	Msa0818550:CDS	45.0%
	AGAAGAGTTGGCAAAGGACA+TGG	+	chr5_3:54489648-54489667	Msa0818550:CDS	45.0%
	GCCAAAAAAAGACGTGCACT+TGG	-	chr5_3:54490114-54490133	None:intergenic	45.0%
	GATGGGACATGCGTCATATA+CGG	+	chr5_3:54490901-54490920	Msa0818550:three_prime_UTR	45.0%
!!!	TTGATTTATTTAATTAATTT+TGG	+	chr5_3:54487280-54487299	Msa0818550:intron	5.0%
!!!	TTGATTTATTTAATTAATTT+TGG	+	chr5_3:54487280-54487299	Msa0818550:intron	5.0%
	GTGTATGTGTCCGTGCTTCA+TGG	-	chr5_3:54487688-54487707	None:intergenic	50.0%
!	GTGCAAAGCGTCACCCTTAT+CGG	-	chr5_3:54488302-54488321	None:intergenic	50.0%
	GATAAGGGTGACGCTTTGCA+CGG	+	chr5_3:54488301-54488320	Msa0818550:CDS	50.0%
	CACAATTAAGGGATGGTGCC+TGG	-	chr5_3:54488937-54488956	None:intergenic	50.0%
	TGTGGTTGCATGTGAAACCC+AGG	-	chr5_3:54490527-54490546	None:intergenic	50.0%
	GTGTATGTGTCCGTGCTTCA+TGG	-	chr5_3:54487688-54487707	None:intergenic	50.0%
!	GTGCAAAGCGTCACCCTTAT+CGG	-	chr5_3:54488302-54488321	None:intergenic	50.0%
	GATAAGGGTGACGCTTTGCA+CGG	+	chr5_3:54488301-54488320	Msa0818550:CDS	50.0%
	CACAATTAAGGGATGGTGCC+TGG	-	chr5_3:54488937-54488956	None:intergenic	50.0%
	TGTGGTTGCATGTGAAACCC+AGG	-	chr5_3:54490527-54490546	None:intergenic	50.0%
	CCACAGGTTGCCTCAAAGAC+CGG	+	chr5_3:54489402-54489421	Msa0818550:intron	55.0%
	CCACAGGTTGCCTCAAAGAC+CGG	+	chr5_3:54489402-54489421	Msa0818550:intron	55.0%
!!	CCGGTCTTTGAGGCAACCTG+TGG	-	chr5_3:54489405-54489424	None:intergenic	60.0%
!!	CCGGTCTTTGAGGCAACCTG+TGG	-	chr5_3:54489405-54489424	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr5_3	gene	54486826	54490938	54486826	ID=Msa0818550;Name=Msa0818550
chr5_3	mRNA	54486826	54490938	54486826	ID=Msa0818550-mRNA-1;Parent=Msa0818550;Name=Msa0818550-mRNA-1;_AED=0.09;_eAED=0.09;_QI=121\|1\|1\|1\|0.77\|0.7\|10\|1021\|249
chr5_3	exon	54486826	54487221	54486826	ID=Msa0818550-mRNA-1:exon:16503;Parent=Msa0818550-mRNA-1
chr5_3	exon	54487339	54487422	54487339	ID=Msa0818550-mRNA-1:exon:16504;Parent=Msa0818550-mRNA-1
chr5_3	exon	54487542	54487602	54487542	ID=Msa0818550-mRNA-1:exon:16505;Parent=Msa0818550-mRNA-1
chr5_3	exon	54488235	54488322	54488235	ID=Msa0818550-mRNA-1:exon:16506;Parent=Msa0818550-mRNA-1
chr5_3	exon	54489220	54489281	54489220	ID=Msa0818550-mRNA-1:exon:16507;Parent=Msa0818550-mRNA-1
chr5_3	exon	54489408	54489473	54489408	ID=Msa0818550-mRNA-1:exon:16508;Parent=Msa0818550-mRNA-1
chr5_3	exon	54489606	54489669	54489606	ID=Msa0818550-mRNA-1:exon:16509;Parent=Msa0818550-mRNA-1
chr5_3	exon	54489783	54490166	54489783	ID=Msa0818550-mRNA-1:exon:16510;Parent=Msa0818550-mRNA-1
chr5_3	exon	54490187	54490587	54490187	ID=Msa0818550-mRNA-1:exon:16511;Parent=Msa0818550-mRNA-1
chr5_3	exon	54490653	54490938	54490653	ID=Msa0818550-mRNA-1:exon:16512;Parent=Msa0818550-mRNA-1
chr5_3	five_prime_UTR	54486826	54486946	54486826	ID=Msa0818550-mRNA-1:five_prime_utr;Parent=Msa0818550-mRNA-1
chr5_3	CDS	54486947	54487221	54486947	ID=Msa0818550-mRNA-1:cds;Parent=Msa0818550-mRNA-1
chr5_3	CDS	54487339	54487422	54487339	ID=Msa0818550-mRNA-1:cds;Parent=Msa0818550-mRNA-1
chr5_3	CDS	54487542	54487602	54487542	ID=Msa0818550-mRNA-1:cds;Parent=Msa0818550-mRNA-1
chr5_3	CDS	54488235	54488322	54488235	ID=Msa0818550-mRNA-1:cds;Parent=Msa0818550-mRNA-1
chr5_3	CDS	54489220	54489281	54489220	ID=Msa0818550-mRNA-1:cds;Parent=Msa0818550-mRNA-1
chr5_3	CDS	54489408	54489473	54489408	ID=Msa0818550-mRNA-1:cds;Parent=Msa0818550-mRNA-1
chr5_3	CDS	54489606	54489669	54489606	ID=Msa0818550-mRNA-1:cds;Parent=Msa0818550-mRNA-1
chr5_3	CDS	54489783	54489832	54489783	ID=Msa0818550-mRNA-1:cds;Parent=Msa0818550-mRNA-1
chr5_3	three_prime_UTR	54489833	54490166	54489833	ID=Msa0818550-mRNA-1:three_prime_utr;Parent=Msa0818550-mRNA-1
chr5_3	three_prime_UTR	54490187	54490587	54490187	ID=Msa0818550-mRNA-1:three_prime_utr;Parent=Msa0818550-mRNA-1
chr5_3	three_prime_UTR	54490653	54490938	54490653	ID=Msa0818550-mRNA-1:three_prime_utr;Parent=Msa0818550-mRNA-1

Gene Sequence

>Msa0818550

ATGCTTCTCAAAGCTGCTGTAAACGCTAACGCTTCTCTTTTCAATTCCGAAAACACGCGTTTGATTCCGTTGCTTCAACGTGGAAGTAAATTGGACCGAATCGCTGTTTCTGCTACGAAAGGTTCGAACAATAACCGTGTTTTAACCGGTGTTTTGTTTGAACCTTTTGAAGAGGTTAAAAAGGAACTTGATCTTGTTCCTATTGTTCCTCAAGATTCTTTAGCTCGTCATAAATTTCATGTTGATTCTGAATCTGCCATTAATGAACAAATCAATGTGGAGTATAATGTTTCGTATGTTTATCATGCGATGTATGCGTATTTCGATAGAGATAATGTTGCGCTGAAAGGTCTTGCTAAGTTTTTTAAGGAATCTAGTGAAGAGGAAAGAGGGCATGCTGAGAAATTGATGGAATATCAGAACAAAAGGGGTGGAAAAGTGAAGTTGCAGTCTATAGTGATGCCGCTCTCTGAGTTTGATCATGCCGATAAGGGTGACGCTTTGCACGCAATGGAACTTGCATTGTCCTTGGAGAAGCTAACAAATGAGAAACTCCTTAACCTGCACAATGTTGCCTCAAAGACCGGTGATGTGAATTTGGCAGACTTTGTGGAAAGCGAGTTTTTGGGTGAACAGGTGGAAGCCATCAAAAAAATATCCGAGTATGTTGCTCAGCTAAGAAGAGTTGGCAAAGGACATGGTGTCTGGCACTTTGATCAGATGTTGCTCAACGAAGCAGCTGCAGCTTGA

Protein sequence

>Msa0818550

MLLKAAVNANASLFNSENTRLIPLLQRGSKLDRIAVSATKGSNNNRVLTGVLFEPFEEVKKELDLVPIVPQDSLARHKFHVDSESAINEQINVEYNVSYVYHAMYAYFDRDNVALKGLAKFFKESSEEERGHAEKLMEYQNKRGGKVKLQSIVMPLSEFDHADKGDALHAMELALSLEKLTNEKLLNLHNVASKTGDVNLADFVESEFLGEQVEAIKKISEYVAQLRRVGKGHGVWHFDQMLLNEAAAA*