AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1185270

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1185270 MtrunA17_Chr8g0350951 95.905 1050 35 4 1 1043 1 1049 0.0 1988
Msa1185270 MtrunA17_Chr7g0246481 75.311 1045 219 13 21 1043 87 1114 0.0 1576
Msa1185270 MtrunA17_Chr5g0398161 68.005 847 261 5 201 1043 14 854 0.0 1214
Msa1185270 MtrunA17_Chr5g0398171 67.887 847 256 6 201 1043 14 848 0.0 1202
Msa1185270 MtrunA17_Chr3g0143471 53.154 856 361 10 224 1042 13 865 0.0 923
Msa1185270 MtrunA17_Chr8g0380631 53.081 844 365 11 222 1042 13 848 0.0 894
Msa1185270 MtrunA17_Chr5g0406161 51.684 861 362 11 221 1036 13 864 0.0 884
Msa1185270 MtrunA17_Chr4g0003411 47.348 792 384 12 253 1032 26 796 0.0 730
Msa1185270 MtrunA17_Chr2g0333021 45.884 826 406 14 219 1032 1 797 0.0 728
Msa1185270 MtrunA17_Chr3g0137791 45.107 838 407 18 223 1033 4 815 0.0 709
Msa1185270 MtrunA17_Chr3g0137821 43.285 834 424 18 223 1033 4 811 0.0 661
Msa1185270 MtrunA17_Chr2g0330431 41.330 767 382 21 276 1032 36 744 2.63e-178 538
Msa1185270 MtrunA17_Chr8g0341931 40.000 775 375 23 276 1032 39 741 2.38e-170 518
Msa1185270 MtrunA17_Chr1g0192401 35.443 237 118 10 734 962 735 944 1.69e-24 110
Msa1185270 MtrunA17_Chr1g0192401 27.917 240 127 10 431 654 355 564 6.44e-17 86.3
Msa1185270 MtrunA17_Chr5g0406151 65.079 63 22 0 552 614 16 78 1.26e-23 95.9
Msa1185270 MtrunA17_Chr2g0295411 34.171 199 99 8 734 927 785 956 9.96e-18 89.0
Msa1185270 MtrunA17_Chr2g0295411 28.631 241 125 11 431 654 381 591 2.93e-14 77.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1185270 AT2G42010.1 76.362 918 204 8 128 1043 177 1083 0.0 1458
Msa1185270 AT2G42010.2 74.337 943 204 9 128 1043 177 1108 0.0 1444
Msa1185270 AT4G00240.1 69.895 950 240 9 94 1043 24 927 0.0 1342
Msa1185270 AT4G00240.2 72.382 869 195 5 175 1043 69 892 0.0 1295
Msa1185270 AT4G00240.3 77.992 777 168 2 267 1043 2 775 0.0 1291
Msa1185270 AT4G11850.1 68.371 841 254 5 209 1043 24 858 0.0 1216
Msa1185270 AT4G11840.1 65.896 865 279 7 189 1043 8 866 0.0 1207
Msa1185270 AT4G11830.2 64.774 863 286 6 192 1043 1 856 0.0 1173
Msa1185270 AT4G11840.2 64.277 865 263 8 189 1043 8 836 0.0 1158
Msa1185270 AT4G11830.1 66.709 796 249 4 257 1043 36 824 0.0 1139
Msa1185270 AT4G35790.2 51.620 864 370 9 216 1042 4 856 0.0 893
Msa1185270 AT4G35790.1 50.971 875 370 10 216 1042 4 867 0.0 885
Msa1185270 AT4G11830.4 64.577 638 220 4 192 827 1 634 0.0 857
Msa1185270 AT4G11830.3 65.484 620 208 4 192 809 1 616 0.0 844
Msa1185270 AT3G15730.1 46.238 824 401 16 223 1033 5 799 0.0 731
Msa1185270 AT1G52570.1 45.763 826 408 15 219 1032 1 798 0.0 722
Msa1185270 AT1G52570.3 45.763 826 408 15 219 1032 1 798 0.0 722
Msa1185270 AT1G52570.2 45.763 826 408 15 219 1032 1 798 0.0 722
Msa1185270 AT4G35790.3 50.147 682 300 7 216 861 4 681 0.0 683
Msa1185270 AT5G25370.1 44.525 831 414 16 222 1032 5 808 0.0 667
Msa1185270 AT5G25370.3 44.525 831 414 16 222 1032 5 808 0.0 667
Msa1185270 AT5G25370.2 44.525 831 414 16 222 1032 5 808 0.0 667
Msa1185270 AT5G25370.4 46.809 752 359 14 298 1032 6 733 0.0 654
Msa1185270 AT1G55180.2 38.768 779 386 26 276 1032 19 728 1.09e-157 484
Msa1185270 AT1G55180.1 38.810 773 394 25 276 1032 41 750 2.95e-157 484
Msa1185270 AT3G05630.1 35.802 243 105 13 734 960 714 921 4.09e-22 103
Msa1185270 AT3G05630.1 28.378 222 114 9 443 649 381 572 1.43e-12 72.8
Msa1185270 AT3G16785.6 33.333 219 112 9 731 943 756 946 6.11e-19 93.2
Msa1185270 AT3G16785.6 31.224 237 114 11 447 669 390 591 1.01e-14 79.7
Msa1185270 AT3G16785.5 33.333 219 112 9 731 943 756 946 6.11e-19 93.2
Msa1185270 AT3G16785.5 31.224 237 114 11 447 669 390 591 1.01e-14 79.7
Msa1185270 AT3G16785.3 33.333 219 112 9 731 943 756 946 6.18e-19 93.6
Msa1185270 AT3G16785.3 31.224 237 114 11 447 669 390 591 8.80e-15 79.7
Msa1185270 AT3G16785.2 33.333 219 112 9 731 943 756 946 6.18e-19 93.6
Msa1185270 AT3G16785.2 31.224 237 114 11 447 669 390 591 8.80e-15 79.7
Msa1185270 AT3G16785.1 33.333 219 112 9 731 943 756 946 7.33e-19 93.2
Msa1185270 AT3G16785.1 31.224 237 114 11 447 669 390 591 1.01e-14 79.7
Msa1185270 AT3G16785.4 33.333 219 112 9 731 943 756 946 7.94e-19 93.2
Msa1185270 AT3G16785.4 31.224 237 114 11 447 669 390 591 8.73e-15 80.1

Find 320 sgRNAs with CRISPR-Local

Find 543 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTACCGATGTCCTTATTT+TGG 0.167559 8_1:-22250862 None:intergenic
GATATGTTTCATAAGACTTT+AGG 0.182948 8_1:+22248031 Msa1185270:CDS
AAGGCTTTCCATTGCTATTA+AGG 0.189314 8_1:-22248363 None:intergenic
CCACTCAAAGGATTCTATTT+TGG 0.190411 8_1:+22252209 Msa1185270:CDS
TGAGAGTGCTTCTTCTTGTT+TGG 0.243527 8_1:+22248779 Msa1185270:CDS
GTATCGACATTTCAGATTAA+AGG 0.247295 8_1:+22254269 Msa1185270:three_prime_UTR
TTATGAAACATATCCATATT+TGG 0.256140 8_1:-22248022 None:intergenic
TTTAAAATTGATTCAATGAT+AGG 0.268772 8_1:+22254736 Msa1185270:three_prime_UTR
CATGAGAATATTTCTGTATC+TGG 0.275594 8_1:+22252560 Msa1185270:CDS
CCTACCTCAAGAAGCATTCT+TGG 0.277370 8_1:+22248808 Msa1185270:CDS
AAGCGTTTGGTTTACATTAC+AGG 0.283048 8_1:+22248649 Msa1185270:CDS
TGCTAAGAATCTTCCAAATA+TGG 0.296309 8_1:+22248009 Msa1185270:CDS
GAGAGTGCTTCTTCTTGTTT+GGG 0.298793 8_1:+22248780 Msa1185270:CDS
GATGATGAATATGTGATAAT+TGG 0.298861 8_1:+22252943 Msa1185270:CDS
GTAGGAAACTCTAAAGGTTT+TGG 0.302615 8_1:-22247485 None:intergenic
AATATTCTCATGCATATCTA+TGG 0.316257 8_1:-22252549 None:intergenic
TATTGGTGTTGTAGCGATTC+CGG 0.316730 8_1:+22248294 Msa1185270:CDS
TTTCTTGCCCATGTATATTC+AGG 0.321637 8_1:-22253036 None:intergenic
ATACAATTGGAGCCAAAATA+AGG 0.327510 8_1:+22250850 Msa1185270:CDS
TTTGGAGGAGGGTATGGATA+TGG 0.331141 8_1:-22247365 None:intergenic
TAGAAGGAATGTGAAGAATT+TGG 0.333420 8_1:-22247452 None:intergenic
GATGTGTTTGGTAAATTTCC+TGG 0.335995 8_1:+22248055 Msa1185270:CDS
GGGTTTGAACCATCACTAAT+TGG 0.336616 8_1:-22247611 None:intergenic
GCATGTGAACCATCACTAAT+TGG 0.337909 8_1:-22247656 None:intergenic
ATATGTTTCATAAGACTTTA+GGG 0.339016 8_1:+22248032 Msa1185270:CDS
TCATCGGTTCTTCATACAAT+TGG 0.344460 8_1:+22250837 Msa1185270:CDS
TACAAACTACTTATTTCATT+TGG 0.349179 8_1:+22254675 Msa1185270:three_prime_UTR
ACCTTTATTGATCCATCTCT+TGG 0.355946 8_1:-22250591 None:intergenic
CCATGATCAAGCATGACATT+AGG 0.363751 8_1:-22248568 None:intergenic
TGTATGTGTTTGTGCTTCAT+AGG 0.367122 8_1:+22254364 Msa1185270:three_prime_UTR
TTCATTTGGTCTTTGTCTGC+AGG 0.374820 8_1:+22254689 Msa1185270:three_prime_UTR
TTCTTCATTTAAAACTGAAT+AGG 0.376183 8_1:-22247771 None:intergenic
CTTTGTTACATATGCACAAA+AGG 0.376414 8_1:-22247154 None:intergenic
CTCCCCACCATCCCCTCTTT+AGG 0.378668 8_1:+22249589 Msa1185270:CDS
GGGTATTGGTGAGGGTAAGG+AGG 0.379691 8_1:-22247632 None:intergenic
AAATTGTTTCCAGTTCATTT+CGG 0.380551 8_1:-22253971 None:intergenic
GGCACAAAGTTAGGTTGTTA+AGG 0.380637 8_1:+22248683 Msa1185270:CDS
ACATTGGTGGTCATTAGAAT+AGG 0.384231 8_1:+22254179 Msa1185270:three_prime_UTR
CTCAATGGAAAATATGTTCC+CGG 0.386858 8_1:-22248490 None:intergenic
GATGGATTTGGAGGAGGGTA+TGG 0.387998 8_1:-22247371 None:intergenic
GGTTGTGATAGTCATCCTTA+TGG 0.388154 8_1:-22249626 None:intergenic
GCAATAGCGAAAATCCTGTT+TGG 0.388642 8_1:+22248185 Msa1185270:CDS
TACAAGGCATTGGTTGAAGT+TGG 0.391694 8_1:+22252464 Msa1185270:CDS
TGGACAGTGTTGGCGTGATA+TGG 0.393113 8_1:+22248606 Msa1185270:CDS
ATGGATATAGGATGTCACTA+TGG 0.393442 8_1:+22253869 Msa1185270:CDS
TCTTCTAATTCTCAGGAAGT+TGG 0.393929 8_1:+22249450 Msa1185270:intron
CATGATCAAGCATGACATTA+GGG 0.394000 8_1:-22248567 None:intergenic
CACCGAGTCATCATTTGAAC+CGG 0.394903 8_1:-22247894 None:intergenic
ATTGGAGGGTATTGTTGGTA+AGG 0.395824 8_1:-22247536 None:intergenic
TTTGGTGGATATGATTCATA+TGG 0.395983 8_1:-22247434 None:intergenic
TAAATGATCAGTTTCTCTAT+TGG 0.398159 8_1:-22248427 None:intergenic
GGTCCGTGTGGCACAAAGTT+AGG 0.402600 8_1:+22248674 Msa1185270:CDS
ATGTTCAGATATCTGATAAC+AGG 0.405284 8_1:+22247723 Msa1185270:CDS
ATTCATACCTGTGGAGTATT+CGG 0.407432 8_1:-22252596 None:intergenic
GCATGAGATGGTTGAGAAGT+AGG 0.408266 8_1:-22247503 None:intergenic
ACTTAATGGCAGGGTAATAC+TGG 0.408891 8_1:+22250168 Msa1185270:intron
TATGGATCATGAGATGGATT+TGG 0.409896 8_1:-22247383 None:intergenic
CTTCCGCCTTAGCGAGGTCC+AGG 0.412129 8_1:+22254230 Msa1185270:three_prime_UTR
AAACATCAACCAGCGCTCTA+TGG 0.412503 8_1:+22252972 Msa1185270:CDS
AATGGTTAGATTCTCTTGAA+TGG 0.413213 8_1:-22254133 None:intergenic
GGAGCAGGACCGAACTATAT+TGG 0.413862 8_1:+22248463 Msa1185270:CDS
CATTGATTGGAGGGTATTGT+TGG 0.417731 8_1:-22247541 None:intergenic
CAATAGCGAAAATCCTGTTT+GGG 0.418333 8_1:+22248186 Msa1185270:CDS
CTCACACAGTCGAGGCTCTC+TGG 0.418763 8_1:-22253931 None:intergenic
GGAGGATATGCATAAGGGTT+TGG 0.419596 8_1:-22247344 None:intergenic
TTTAAATGAAGAAAAGAAAG+AGG 0.419846 8_1:+22247781 Msa1185270:CDS
GGAGGGTATTGGTGAGGGTA+AGG 0.421455 8_1:-22247590 None:intergenic
GGAGGGTATTGGTGAGGGTA+AGG 0.421455 8_1:-22247635 None:intergenic
CATTGGTGGTCATTAGAATA+GGG 0.421927 8_1:+22254180 Msa1185270:three_prime_UTR
GAACATTCTTACTCTGGTGT+GGG 0.422287 8_1:+22247845 Msa1185270:CDS
CCTAATGTCATGCTTGATCA+TGG 0.423373 8_1:+22248568 Msa1185270:CDS
TACAGCATTCAATAAAGAAA+TGG 0.425064 8_1:-22248140 None:intergenic
ATTGTTCCAGCTCAGTATAA+AGG 0.425839 8_1:+22247935 Msa1185270:CDS
ATCATTTATCATCAAGGAGT+TGG 0.426597 8_1:+22248442 Msa1185270:CDS
GGTAAGGTTAGACCTCTTCC+TGG 0.426834 8_1:+22254060 Msa1185270:CDS
GAATAGGAATGTGTCATTAC+TGG 0.430913 8_1:-22247755 None:intergenic
AACTCTACTATGTAGGTTCA+TGG 0.431744 8_1:+22253850 Msa1185270:intron
CATACGTCAAGCGAAGCGTT+TGG 0.432042 8_1:+22248636 Msa1185270:CDS
TAAGATATTACCGTGAAAGT+AGG 0.435210 8_1:-22249648 None:intergenic
ACAAGGCATTGGTTGAAGTT+GGG 0.435453 8_1:+22252465 Msa1185270:CDS
TGCTAATAATTTAATTCCAA+TGG 0.435805 8_1:+22252087 Msa1185270:CDS
TCAGCAGCATGATGCGCAAC+AGG 0.436587 8_1:-22248226 None:intergenic
ACATAGCTGGGCTAAGCAAC+AGG 0.437268 8_1:+22249129 Msa1185270:CDS
TTGTTCCAGCTCAGTATAAA+GGG 0.438417 8_1:+22247936 Msa1185270:CDS
GGGTTTGAACCATCATTGAT+TGG 0.439578 8_1:-22247554 None:intergenic
GCCAAGAGATGGATCAATAA+AGG 0.440241 8_1:+22250590 Msa1185270:CDS
GCACAAAGTTAGGTTGTTAA+GGG 0.442700 8_1:+22248684 Msa1185270:CDS
ACAGTTCCACCTTTCCTCAA+TGG 0.443351 8_1:-22248505 None:intergenic
AATGGAAAGCCTTGTAAGCC+AGG 0.443422 8_1:+22248373 Msa1185270:CDS
TTAAGAGCTGCGAAACCTAC+AGG 0.446159 8_1:+22250282 Msa1185270:CDS
GATCCATCTCTTGGCTCCTT+CGG 0.448291 8_1:-22250582 None:intergenic
GGATCATGAGATGGATTTGG+AGG 0.448578 8_1:-22247380 None:intergenic
GAACAATGTCCGAAATGAAC+TGG 0.448762 8_1:+22253962 Msa1185270:CDS
GCTCAAGATAGAAAGAATTC+CGG 0.449637 8_1:+22250341 Msa1185270:CDS
GATGCTGGTGGAGGTGCATA+TGG 0.449919 8_1:-22247401 None:intergenic
GGATATGGAGGATATGCATA+AGG 0.452165 8_1:-22247350 None:intergenic
GACTTGCATTCTAAAATTGA+CGG 0.452345 8_1:+22250216 Msa1185270:CDS
CATCACTAATTGGAGGGTAT+TGG 0.452496 8_1:-22247601 None:intergenic
CATCACTAATTGGAGGGTAT+TGG 0.452496 8_1:-22247646 None:intergenic
GTGGTAGGTTCACAGCTTAT+TGG 0.454045 8_1:+22248277 Msa1185270:CDS
GTGTCGACATGTGTCGTATT+TGG 0.455742 8_1:+22254341 Msa1185270:three_prime_UTR
TTCCATTGCTATTAAGGATA+GGG 0.456177 8_1:-22248357 None:intergenic
TCAGATACACGGAGAATATC+CGG 0.456785 8_1:-22250360 None:intergenic
GCACCTGTTGGAACACCCTC+TGG 0.456870 8_1:-22252184 None:intergenic
AAGACTTTAGGGGATGTGTT+TGG 0.458184 8_1:+22248043 Msa1185270:CDS
TCCTGCAGCTTGGCATGCTC+AGG 0.459522 8_1:+22250407 Msa1185270:CDS
CATGGGATGCATTATGTTCA+TGG 0.459721 8_1:+22248586 Msa1185270:CDS
TTTCCATTGCTATTAAGGAT+AGG 0.460310 8_1:-22248358 None:intergenic
TGGCCAGAGGGTGTTCCAAC+AGG 0.460902 8_1:+22252181 Msa1185270:CDS
TGAACATTCTTACTCTGGTG+TGG 0.463985 8_1:+22247844 Msa1185270:CDS
CATGGTTCTGCACCTCCCTA+TGG 0.465279 8_1:+22247317 Msa1185270:CDS
ATCTTTAGCGCAATTTCCAT+TGG 0.466239 8_1:-22252103 None:intergenic
CTATGTAGGTTCATGGATAT+AGG 0.466420 8_1:+22253857 Msa1185270:intron
TCTTTATTGAATGCTGTAGT+TGG 0.468089 8_1:+22248145 Msa1185270:CDS
TTGAAATATTTGCTCTTGCA+TGG 0.468097 8_1:+22247962 Msa1185270:CDS
GGTTATGAACATTCTTACTC+TGG 0.470134 8_1:+22247839 Msa1185270:CDS
GTATAATCCGATGCCTTACC+AGG 0.470375 8_1:-22248718 None:intergenic
TGAAAGTGTTGCTCCCAAAC+AGG 0.472685 8_1:-22248199 None:intergenic
CTATCACAACCCTACTTTCA+CGG 0.473663 8_1:+22249638 Msa1185270:CDS
ACTATCTTTCCTCCCACATC+AGG 0.473862 8_1:-22254096 None:intergenic
GCTTCTGAGGTCTAAGTCTC+AGG 0.476731 8_1:+22248750 Msa1185270:CDS
AATGACCCTTTATACTGAGC+TGG 0.480884 8_1:-22247941 None:intergenic
ACCGAACTATATTGGTGTGC+CGG 0.482130 8_1:+22248471 Msa1185270:CDS
AAAACAGCACCTGGCTTACA+AGG 0.482429 8_1:-22248382 None:intergenic
ATACCCTTGGTGAGCTTCTG+AGG 0.485521 8_1:+22248737 Msa1185270:CDS
CCTGTAGAAGTTGATAGAAA+AGG 0.487002 8_1:+22254039 Msa1185270:CDS
CTCTATTGGTAGGAACTGAA+TGG 0.487662 8_1:-22248413 None:intergenic
CCTGAGTATAATTGTTCGAC+CGG 0.487902 8_1:-22248313 None:intergenic
CCTACCAACCTGAATATACA+TGG 0.489487 8_1:+22253028 Msa1185270:CDS
AATAAAGAAATGGACACATA+AGG 0.491292 8_1:-22248130 None:intergenic
GTCAAAACATCATAAGCTGC+TGG 0.491386 8_1:-22250240 None:intergenic
TCATGAGATGGATTTGGAGG+AGG 0.491884 8_1:-22247377 None:intergenic
ACCTGAGCATGCCAAGCTGC+AGG 0.492275 8_1:-22250408 None:intergenic
GGTATTGGTGAGGGTAAGGA+GGG 0.493904 8_1:-22247631 None:intergenic
CGAGACAGTTTACAAGGCAT+TGG 0.494872 8_1:+22252454 Msa1185270:CDS
ATTGATTCAAATTCTGTCAA+GGG 0.495463 8_1:+22250555 Msa1185270:CDS
GGATATGATTCATATGGATA+AGG 0.496194 8_1:-22247428 None:intergenic
CAAACGCTTCGCTTGACGTA+TGG 0.496371 8_1:-22248635 None:intergenic
GGACGCTGTTGGACCTGGTA+AGG 0.497063 8_1:+22248705 Msa1185270:CDS
TTGTTCCTTCCATAGAGCGC+TGG 0.501014 8_1:-22252981 None:intergenic
CATGAGATGGATTTGGAGGA+GGG 0.501019 8_1:-22247376 None:intergenic
CCATGTATATTCAGGTTGGT+AGG 0.504855 8_1:-22253028 None:intergenic
ATGATTTACGTTCATTCGAA+AGG 0.505993 8_1:+22252910 Msa1185270:CDS
AGAAGTTGATAGAAAAGGTA+AGG 0.506591 8_1:+22254044 Msa1185270:CDS
AATGTGAGTAATAAGATTGA+GGG 0.506928 8_1:+22248079 Msa1185270:CDS
CTCATAAGATCATTCAAATG+AGG 0.508836 8_1:-22247698 None:intergenic
TGTCCTAAAGAGGGGATGGT+GGG 0.510058 8_1:-22249592 None:intergenic
AAGGCATCGGATTATACCCT+TGG 0.512333 8_1:+22248724 Msa1185270:CDS
CCCGGCACACCAATATAGTT+CGG 0.512639 8_1:-22248472 None:intergenic
TACCCTATCCTTAATAGCAA+TGG 0.512742 8_1:+22248355 Msa1185270:CDS
AACATTCTTACTCTGGTGTG+GGG 0.512770 8_1:+22247846 Msa1185270:CDS
GTAATTGTAGATGCTGATGC+TGG 0.513557 8_1:+22249501 Msa1185270:CDS
ATCTTATTACTCACATTACC+AGG 0.515749 8_1:-22248073 None:intergenic
TATTGAATGCTGTAGTTGGT+AGG 0.515974 8_1:+22248149 Msa1185270:CDS
TGGAATCTTAAGTTCGAACC+TGG 0.517092 8_1:-22254604 None:intergenic
GGGTATTGTTGGTAAGGGTA+AGG 0.517750 8_1:-22247530 None:intergenic
CAAAATCTTTCAGCTTATCC+CGG 0.518150 8_1:+22247875 Msa1185270:CDS
TTGGAGGGTATTGTTGGTAA+GGG 0.519129 8_1:-22247535 None:intergenic
CTTTGAGTGGCAGCACCTGT+TGG 0.520449 8_1:-22252196 None:intergenic
TTAAGGGACGCTGTTGGACC+TGG 0.523363 8_1:+22248700 Msa1185270:CDS
GTATGTGTTTGTGCTTCATA+GGG 0.524121 8_1:+22254365 Msa1185270:three_prime_UTR
AACTCTTCTTGACCAGGAAG+AGG 0.525086 8_1:-22254072 None:intergenic
AGGGACACTGAGATTGCAAT+GGG 0.525724 8_1:+22253003 Msa1185270:CDS
TAATGTGAGTAATAAGATTG+AGG 0.526007 8_1:+22248078 Msa1185270:CDS
CCAAGAATGCTTCTTGAGGT+AGG 0.526097 8_1:-22248808 None:intergenic
CTGTCTGCAGTGTCCTAAAG+AGG 0.526835 8_1:-22249602 None:intergenic
AGTGTTACTTTGTCCTCGCA+TGG 0.527308 8_1:+22249096 Msa1185270:CDS
ACTACATCACAACTCTTCCC+TGG 0.527799 8_1:-22254248 None:intergenic
AAATGAAAGGAAGAAAAGTA+AGG 0.527839 8_1:-22254511 None:intergenic
ACATTCTTACTCTGGTGTGG+GGG 0.527901 8_1:+22247847 Msa1185270:CDS
AAAATTGTAGCATTTGTTGG+AGG 0.528231 8_1:+22249537 Msa1185270:CDS
ACATTCTTATCCACGCGGAC+AGG 0.528726 8_1:+22253059 Msa1185270:CDS
AATTGATTCAAATTCTGTCA+AGG 0.528985 8_1:+22250554 Msa1185270:CDS
AAGATATTACCGTGAAAGTA+GGG 0.529154 8_1:-22249647 None:intergenic
TTACTTTGTCCTCGCATGGC+CGG 0.529499 8_1:+22249100 Msa1185270:CDS
GACACTGCAGACAGTCCATA+AGG 0.530024 8_1:+22249611 Msa1185270:CDS
GGAGGGCTTGATTTGTGTGA+CGG 0.530764 8_1:+22249555 Msa1185270:CDS
CCGAACTATATTGGTGTGCC+GGG 0.531404 8_1:+22248472 Msa1185270:CDS
CTTTGTTGCATATGCACACA+AGG 0.532441 8_1:-22247206 None:intergenic
GATATGGAGGATATGCATAA+GGG 0.532623 8_1:-22247349 None:intergenic
CATTCTTACTCTGGTGTGGG+GGG 0.533044 8_1:+22247848 Msa1185270:CDS
CAAGAATGCTTCTTGAGGTA+GGG 0.533945 8_1:-22248807 None:intergenic
GTACATTCTTCCCACATACA+AGG 0.534684 8_1:-22250733 None:intergenic
TTGAACCATCATTGATTGGA+GGG 0.535519 8_1:-22247550 None:intergenic
TATCATCAAGGAGTTGGAGC+AGG 0.535716 8_1:+22248448 Msa1185270:CDS
TGAGAAGTAGGAAACTCTAA+AGG 0.536004 8_1:-22247491 None:intergenic
TTTGTTACATATGCACAAAA+GGG 0.536174 8_1:-22247153 None:intergenic
TGACAAACTTTGAGGAGCGC+TGG 0.536495 8_1:+22250259 Msa1185270:CDS
TGATCAGTTTCTCTATTGGT+AGG 0.538674 8_1:-22248423 None:intergenic
TGTGTCATTACTGGTGCACT+TGG 0.538843 8_1:-22247746 None:intergenic
TCACTATGGGCAGAACATAC+AGG 0.539487 8_1:+22253883 Msa1185270:CDS
AGCGTTTGGTTTACATTACA+GGG 0.540578 8_1:+22248650 Msa1185270:CDS
CAATACCCTCCAATCAATGA+TGG 0.540902 8_1:+22247545 Msa1185270:CDS
AAATGAGGGTAAGCAGAACT+AGG 0.541897 8_1:-22247683 None:intergenic
TTGCCCATGTATATTCAGGT+TGG 0.543355 8_1:-22253032 None:intergenic
ATAGAGAATCAATATTTCAT+CGG 0.543982 8_1:+22250821 Msa1185270:CDS
AAATTGTAGCATTTGTTGGA+GGG 0.546801 8_1:+22249538 Msa1185270:CDS
AAACTGATCATTTATCATCA+AGG 0.547611 8_1:+22248436 Msa1185270:CDS
CTGGAACAATCTGCAAACTC+TGG 0.547794 8_1:-22247922 None:intergenic
ATAAGGGTTTGGATATCCAT+AGG 0.548750 8_1:-22247333 None:intergenic
ATCAACCAGCGCTCTATGGA+AGG 0.550389 8_1:+22252976 Msa1185270:CDS
GGAACACCCTCTGGCCACAT+TGG 0.550542 8_1:-22252175 None:intergenic
GGTAAGGAGAACTATGAGGA+GGG 0.552391 8_1:-22247574 None:intergenic
TTTCCGAAGGAGCCAAGAGA+TGG 0.552961 8_1:+22250579 Msa1185270:CDS
GTAATACTGGTGGTTGTCCA+CGG 0.553468 8_1:+22250181 Msa1185270:CDS
CTCTTCCCTGGACCTCGCTA+AGG 0.554581 8_1:-22254236 None:intergenic
CTCCGTGTGTTTATTTGAGT+AGG 0.555611 8_1:-22254563 None:intergenic
CAACCTAACTTTGTGCCACA+CGG 0.557240 8_1:-22248677 None:intergenic
ACCTGTGGAGTATTCGGTGG+GGG 0.557284 8_1:-22252590 None:intergenic
CAAGATGCTCATGTTCCAGA+TGG 0.558067 8_1:+22248538 Msa1185270:CDS
AATGCAATGCATGTTGATTG+AGG 0.558932 8_1:+22254450 Msa1185270:three_prime_UTR
TCAAGAAGAGTTTCCTGATG+TGG 0.560822 8_1:+22254083 Msa1185270:CDS
ACATTAGGGAGACATCCATC+TGG 0.560998 8_1:-22248553 None:intergenic
AGAGCCTCGACTGTGTGAGA+AGG 0.561093 8_1:+22253935 Msa1185270:CDS
TGAGGGTAAGGAGAACTATG+AGG 0.565689 8_1:-22247578 None:intergenic
GTGTCCTAAAGAGGGGATGG+TGG 0.566785 8_1:-22249593 None:intergenic
CAACAGGTGCTGCCACTCAA+AGG 0.567707 8_1:+22252197 Msa1185270:CDS
GGGTAAGGATAAGCATGAGA+TGG 0.567738 8_1:-22247515 None:intergenic
TGGGAGAAATGTGGTGACCC+AGG 0.571139 8_1:+22254586 Msa1185270:three_prime_UTR
GATGTGGGAGGAAAGATAGT+AGG 0.571855 8_1:+22254099 Msa1185270:CDS
GTCCTAAAGAGGGGATGGTG+GGG 0.571946 8_1:-22249591 None:intergenic
TGGATATAGGATGTCACTAT+GGG 0.572239 8_1:+22253870 Msa1185270:CDS
TTCTGTCAAGGGATTTCCGA+AGG 0.572502 8_1:+22250566 Msa1185270:CDS
AAGGAATGTGAAGAATTTGG+TGG 0.573044 8_1:-22247449 None:intergenic
TGCGAGGACAAAGTAACACT+TGG 0.573966 8_1:-22249093 None:intergenic
GAGCCTCGACTGTGTGAGAA+GGG 0.574653 8_1:+22253936 Msa1185270:CDS
CATACACACAGCGTATGTAA+AGG 0.575473 8_1:+22250769 Msa1185270:CDS
TAATACTGGTGGTTGTCCAC+GGG 0.576294 8_1:+22250182 Msa1185270:CDS
GGAGGAGGGTATGGATATGG+AGG 0.576489 8_1:-22247362 None:intergenic
CTAATGTCATGCTTGATCAT+GGG 0.578880 8_1:+22248569 Msa1185270:CDS
GATGGTGGGGAGTATCATAT+CGG 0.579406 8_1:-22249578 None:intergenic
CAAGAAGAGTTTCCTGATGT+GGG 0.579713 8_1:+22254084 Msa1185270:CDS
TTACATTCAGGATGGTGTCA+TGG 0.580082 8_1:+22249024 Msa1185270:intron
TCCCGGTTCAAATGATGACT+CGG 0.582675 8_1:+22247892 Msa1185270:CDS
ATACCTGTGGAGTATTCGGT+GGG 0.583261 8_1:-22252592 None:intergenic
CACTAGGAGCATCAGATACA+CGG 0.584785 8_1:-22250371 None:intergenic
GATGTACGAGACAGTTTACA+AGG 0.587050 8_1:+22252448 Msa1185270:CDS
TATGGATAAGGAGAAGATGC+TGG 0.588026 8_1:-22247416 None:intergenic
CATACCTGTGGAGTATTCGG+TGG 0.588482 8_1:-22252593 None:intergenic
TTTGAACCATCATTGATTGG+AGG 0.588603 8_1:-22247551 None:intergenic
TTCCCTGGACCTCGCTAAGG+CGG 0.590283 8_1:-22254233 None:intergenic
GCAGTGTCCTAAAGAGGGGA+TGG 0.591611 8_1:-22249596 None:intergenic
CTCAAATAAACACACGGAGT+GGG 0.592494 8_1:+22254567 Msa1185270:three_prime_UTR
TGTTGGACCTGGTAAGGCAT+CGG 0.595065 8_1:+22248711 Msa1185270:CDS
GGGTAAGGAGAACTATGAGG+AGG 0.596096 8_1:-22247575 None:intergenic
TTTGTACATATATACATGAA+AGG 0.598731 8_1:-22254658 None:intergenic
TTAGAATGCAAGTCGTGCCA+CGG 0.599340 8_1:-22250207 None:intergenic
GTGTTTATTTGAGTAGGTGT+TGG 0.599603 8_1:-22254557 None:intergenic
TAAGGGTTTGGATATCCATA+GGG 0.601070 8_1:-22247332 None:intergenic
GTGGTTGTCCACGGGAACCG+TGG 0.601120 8_1:+22250190 Msa1185270:CDS
TGTCTGCAGTGTCCTAAAGA+GGG 0.601121 8_1:-22249601 None:intergenic
AGCGCTCTATGGAAGGAACA+AGG 0.602741 8_1:+22252983 Msa1185270:CDS
TTGAACCATCACTAATTGGA+GGG 0.602933 8_1:-22247607 None:intergenic
TCATAAGATCATTCAAATGA+GGG 0.604215 8_1:-22247697 None:intergenic
TATGTTTCATAAGACTTTAG+GGG 0.604232 8_1:+22248033 Msa1185270:CDS
CTAATTGGAGGGTATTGGTG+AGG 0.607381 8_1:-22247596 None:intergenic
CTAATTGGAGGGTATTGGTG+AGG 0.607381 8_1:-22247641 None:intergenic
ACGATGTGACAGAGATGAGA+GGG 0.609284 8_1:+22254001 Msa1185270:CDS
AAGGGACACTGAGATTGCAA+TGG 0.610636 8_1:+22253002 Msa1185270:CDS
GTTATTCCAATGTGGCCAGA+GGG 0.610992 8_1:+22252169 Msa1185270:CDS
TTTGAACCATCACTAATTGG+AGG 0.611046 8_1:-22247608 None:intergenic
CAATACCCTCCAATTAGTGA+TGG 0.611477 8_1:+22247602 Msa1185270:CDS
CAATACCCTCCAATTAGTGA+TGG 0.611477 8_1:+22247647 Msa1185270:CDS
GTGATGATAATCCTGCAGCT+TGG 0.615264 8_1:+22250397 Msa1185270:CDS
AAGTCGTGCCACGGTTCCCG+TGG 0.615722 8_1:-22250198 None:intergenic
GTAATGTTGTGCAGCACGAA+TGG 0.616013 8_1:-22250792 None:intergenic
CACCTACTCAAATAAACACA+CGG 0.616664 8_1:+22254561 Msa1185270:three_prime_UTR
ATAACCAAGAATGCTTCTTG+AGG 0.616998 8_1:-22248812 None:intergenic
TCAGGAAACTCTTCTTGACC+AGG 0.617302 8_1:-22254078 None:intergenic
TACCTGTGGAGTATTCGGTG+GGG 0.617825 8_1:-22252591 None:intergenic
CCAAAATAGAATCCTTTGAG+TGG 0.627163 8_1:-22252209 None:intergenic
CTTGTGTGCATATGCAACAA+AGG 0.627325 8_1:+22247207 Msa1185270:five_prime_UTR
TAATTGGAGGGTATTGGTGA+GGG 0.628043 8_1:-22247595 None:intergenic
TAATTGGAGGGTATTGGTGA+GGG 0.628043 8_1:-22247640 None:intergenic
GTAACACTCAAAACAGCACC+TGG 0.629220 8_1:-22248391 None:intergenic
TGTGAACCATCACTAATTGG+AGG 0.630083 8_1:-22247653 None:intergenic
AGATTGAGGGAACAGTGACT+AGG 0.630110 8_1:+22248092 Msa1185270:CDS
AGTTATTCCAATGTGGCCAG+AGG 0.630514 8_1:+22252168 Msa1185270:CDS
TAAGGAGAAGATGCTGGTGG+AGG 0.634046 8_1:-22247410 None:intergenic
TAAGAGCTGCGAAACCTACA+GGG 0.634099 8_1:+22250283 Msa1185270:CDS
TGGAGCCAAAATAAGGACAT+CGG 0.635144 8_1:+22250857 Msa1185270:CDS
ACTCAAATAAACACACGGAG+TGG 0.635496 8_1:+22254566 Msa1185270:three_prime_UTR
CCGGTCGAACAATTATACTC+AGG 0.636948 8_1:+22248313 Msa1185270:CDS
GTCTGCAGTGTCCTAAAGAG+GGG 0.637553 8_1:-22249600 None:intergenic
GGTGCATATGGATCATGAGA+TGG 0.637719 8_1:-22247389 None:intergenic
GTGAACCATCACTAATTGGA+GGG 0.639391 8_1:-22247652 None:intergenic
GTTAAGGATAGTGATGTGGT+AGG 0.641479 8_1:+22248262 Msa1185270:CDS
GAACCCTTCTCACACAGTCG+AGG 0.642720 8_1:-22253939 None:intergenic
TTCCGCCTTAGCGAGGTCCA+GGG 0.643087 8_1:+22254231 Msa1185270:three_prime_UTR
ACCGAGTCATCATTTGAACC+GGG 0.643148 8_1:-22247893 None:intergenic
GGAATCTTAAGTTCGAACCT+GGG 0.645159 8_1:-22254603 None:intergenic
AACGATGTGACAGAGATGAG+AGG 0.649672 8_1:+22254000 Msa1185270:CDS
GAACGTAAATCATGAACCGT+CGG 0.651377 8_1:-22252900 None:intergenic
GGATTATCATCACAAACACT+AGG 0.653888 8_1:-22250387 None:intergenic
CACACGGAGTGGGAGAAATG+TGG 0.653927 8_1:+22254577 Msa1185270:three_prime_UTR
AGACCTCAGAAGCTCACCAA+GGG 0.655832 8_1:-22248740 None:intergenic
ACATTACAGGGTGGTCCGTG+TGG 0.656306 8_1:+22248662 Msa1185270:CDS
AGGTTGTTAAGGGACGCTGT+TGG 0.657123 8_1:+22248694 Msa1185270:CDS
GGCGGAAGCACTATAGCACT+AGG 0.658426 8_1:-22254215 None:intergenic
AAAATGTGTGCATGCGACAA+CGG 0.659094 8_1:+22254630 Msa1185270:three_prime_UTR
CTGAGGTCTAAGTCTCAGGA+AGG 0.659626 8_1:+22248754 Msa1185270:CDS
ATAGTGCTTCCGCCTTAGCG+AGG 0.662077 8_1:+22254224 Msa1185270:three_prime_UTR
TGAGGGTAAGCAGAACTAGG+AGG 0.664474 8_1:-22247680 None:intergenic
GGATAAGGAGAAGATGCTGG+TGG 0.665333 8_1:-22247413 None:intergenic
GAAGAGTTTCCTGATGTGGG+AGG 0.673312 8_1:+22254087 Msa1185270:CDS
CTACCAACCTGAATATACAT+GGG 0.675441 8_1:+22253029 Msa1185270:CDS
TGTTGTTAAGGATAGTGATG+TGG 0.675748 8_1:+22248258 Msa1185270:CDS
ATTATGTTCATGGACAGTGT+TGG 0.680055 8_1:+22248596 Msa1185270:CDS
TAATGGCAGGGTAATACTGG+TGG 0.680608 8_1:+22250171 Msa1185270:intron
AAAACGTATACCTGTCCGCG+TGG 0.684784 8_1:-22253069 None:intergenic
TGTCATGGCGACGCATGATG+AGG 0.685775 8_1:+22249039 Msa1185270:CDS
TATACATAGTTATTCCAATG+TGG 0.686510 8_1:+22252161 Msa1185270:CDS
GCGCTCTATGGAAGGAACAA+GGG 0.686823 8_1:+22252984 Msa1185270:CDS
TAGACCTCAGAAGCTCACCA+AGG 0.688115 8_1:-22248741 None:intergenic
GGGTTTGGATATCCATAGGG+AGG 0.690211 8_1:-22247329 None:intergenic
CAAATAGTCGAAATAACCGA+CGG 0.698089 8_1:+22252884 Msa1185270:CDS
TGTTCAGTGTCTCAAACATG+TGG 0.700838 8_1:+22254294 Msa1185270:three_prime_UTR
TTTGTTGCATATGCACACAA+GGG 0.724624 8_1:-22247205 None:intergenic
GTTTGGTTTACATTACAGGG+TGG 0.732011 8_1:+22248653 Msa1185270:CDS
AGAAAACATTCTTATCCACG+CGG 0.794756 8_1:+22253054 Msa1185270:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAATGTAATTTAAACAAAA+AGG - chr8_1:22248995-22249014 None:intergenic 10.0%
!!! AAAGATTAGAATTATTTTAA+CGG + chr8_1:22251868-22251887 Msa1185270:intron 10.0%
!! AAAATTAAATAAAAAATCCA+GGG - chr8_1:22252406-22252425 None:intergenic 10.0%
!! AAAAATTAAATAAAAAATCC+AGG - chr8_1:22252407-22252426 None:intergenic 10.0%
!! AGTCAATTATATATATAAAA+AGG - chr8_1:22253653-22253672 None:intergenic 10.0%
!!! TATATAATTGACTTATTTAA+CGG + chr8_1:22253660-22253679 Msa1185270:intron 10.0%
!!! TTTACAAATTTGTACAATTT+TGG + chr8_1:22249405-22249424 Msa1185270:intron 15.0%
!!! ATCAATCATTTTAAATTCTT+TGG + chr8_1:22250048-22250067 Msa1185270:intron 15.0%
!! TATGACTATTTATGTATATA+TGG + chr8_1:22251062-22251081 Msa1185270:intron 15.0%
!! ATGACTATTTATGTATATAT+GGG + chr8_1:22251063-22251082 Msa1185270:intron 15.0%
!!! TATGTTTGAAACTTTAAATT+TGG + chr8_1:22251290-22251309 Msa1185270:intron 15.0%
!!! TAAATTTTGTGAAATGAATA+TGG + chr8_1:22252753-22252772 Msa1185270:intron 15.0%
!! AATAGAAGAAAAAAAATGAA+AGG - chr8_1:22254527-22254546 None:intergenic 15.0%
!!! TTTCATTTTTTTTCTTCTAT+TGG + chr8_1:22254526-22254545 Msa1185270:three_prime_UTR 15.0%
!!! TTTAAAATTGATTCAATGAT+AGG + chr8_1:22254736-22254755 Msa1185270:three_prime_UTR 15.0%
!!! TTCTTCATTTAAAACTGAAT+AGG - chr8_1:22247774-22247793 None:intergenic 20.0%
!! TTTAAATGAAGAAAAGAAAG+AGG + chr8_1:22247781-22247800 Msa1185270:CDS 20.0%
!! TTATGAAACATATCCATATT+TGG - chr8_1:22248025-22248044 None:intergenic 20.0%
!! ATATGTTTCATAAGACTTTA+GGG + chr8_1:22248032-22248051 Msa1185270:CDS 20.0%
!! TTAAAATTCATAAATCATGC+CGG - chr8_1:22248899-22248918 None:intergenic 20.0%
!! ATTCCTCTTTATATTCTAAT+CGG + chr8_1:22249196-22249215 Msa1185270:intron 20.0%
!! GAATTAGAAGAAATTTAATG+CGG - chr8_1:22249441-22249460 None:intergenic 20.0%
!! TTAAATTTCTTCTAATTCTC+AGG + chr8_1:22249443-22249462 Msa1185270:intron 20.0%
!! TATATAAGATTTACATATCG+CGG - chr8_1:22249915-22249934 None:intergenic 20.0%
!! TTTAAAAAATTGAAACCTGT+TGG - chr8_1:22250102-22250121 None:intergenic 20.0%
!!! ATCAATTTATTCTGATAATG+CGG + chr8_1:22250142-22250161 Msa1185270:intron 20.0%
!! ATAGAGAATCAATATTTCAT+CGG + chr8_1:22250821-22250840 Msa1185270:CDS 20.0%
!! CTAGGAAATTATATATAGTA+CGG + chr8_1:22251016-22251035 Msa1185270:intron 20.0%
!! GAAACTTTAAATTGAGTTAA+AGG - chr8_1:22251140-22251159 None:intergenic 20.0%
!! GTTGATGTATATAAACATAA+AGG - chr8_1:22251225-22251244 None:intergenic 20.0%
!! AACATTTAAATCACATCAAA+AGG + chr8_1:22251437-22251456 Msa1185270:intron 20.0%
!! ATGACATGAAAAAAAGATAA+AGG + chr8_1:22251675-22251694 Msa1185270:intron 20.0%
!!! AAACTTTGAGTTAAGTTAAA+AGG + chr8_1:22251707-22251726 Msa1185270:intron 20.0%
!! TGCTAATAATTTAATTCCAA+TGG + chr8_1:22252087-22252106 Msa1185270:CDS 20.0%
!! AAAGATTGCTGAAAAAATAA+AGG + chr8_1:22252120-22252139 Msa1185270:CDS 20.0%
!!! GTATACGTTTTATAAGTTAT+TGG + chr8_1:22253081-22253100 Msa1185270:intron 20.0%
!! TTTATATTTCTCAAATTTCC+TGG + chr8_1:22253335-22253354 Msa1185270:intron 20.0%
!!! CTATCCTAGTTTTAATATAA+GGG + chr8_1:22253430-22253449 Msa1185270:intron 20.0%
!! ATTACCCTTATATTAAAACT+AGG - chr8_1:22253437-22253456 None:intergenic 20.0%
!! TAAAAACTAAACTCATCAAA+TGG - chr8_1:22254154-22254173 None:intergenic 20.0%
!!! TTTAGTTTTTACATTCACAT+TGG + chr8_1:22254163-22254182 Msa1185270:three_prime_UTR 20.0%
!! TTTGTACATATATACATGAA+AGG - chr8_1:22254661-22254680 None:intergenic 20.0%
!! TACAAACTACTTATTTCATT+TGG + chr8_1:22254675-22254694 Msa1185270:three_prime_UTR 20.0%
! TTTGTTACATATGCACAAAA+GGG - chr8_1:22247156-22247175 None:intergenic 25.0%
!!! CAATTTTGAGTTTTGATTCA+TGG + chr8_1:22247289-22247308 Msa1185270:exon 25.0%
! TCATAAGATCATTCAAATGA+GGG - chr8_1:22247700-22247719 None:intergenic 25.0%
!! TCTAGTAGTAATTCTTTTTC+AGG + chr8_1:22247818-22247837 Msa1185270:CDS 25.0%
! GATATGTTTCATAAGACTTT+AGG + chr8_1:22248031-22248050 Msa1185270:CDS 25.0%
! TATGTTTCATAAGACTTTAG+GGG + chr8_1:22248033-22248052 Msa1185270:CDS 25.0%
! TAATGTGAGTAATAAGATTG+AGG + chr8_1:22248078-22248097 Msa1185270:CDS 25.0%
! AATGTGAGTAATAAGATTGA+GGG + chr8_1:22248079-22248098 Msa1185270:CDS 25.0%
! AATAAAGAAATGGACACATA+AGG - chr8_1:22248133-22248152 None:intergenic 25.0%
! TACAGCATTCAATAAAGAAA+TGG - chr8_1:22248143-22248162 None:intergenic 25.0%
! TAAATGATCAGTTTCTCTAT+TGG - chr8_1:22248430-22248449 None:intergenic 25.0%
! AAACTGATCATTTATCATCA+AGG + chr8_1:22248436-22248455 Msa1185270:CDS 25.0%
! TTACATTTGATTATGTGATG+TGG + chr8_1:22248865-22248884 Msa1185270:intron 25.0%
! TAAACATCTGATTTACATTC+AGG + chr8_1:22249012-22249031 Msa1185270:intron 25.0%
! ATTCCTCTTTATATTCGAAT+TGG + chr8_1:22249245-22249264 Msa1185270:intron 25.0%
! GAATGTTAGAATTTGTGATA+AGG + chr8_1:22249357-22249376 Msa1185270:intron 25.0%
! AGAAAAATTGTAGCATTTGT+TGG + chr8_1:22249534-22249553 Msa1185270:CDS 25.0%
! TGATGTTCATGTAATCAAAT+GGG - chr8_1:22249684-22249703 None:intergenic 25.0%
! ATTTGAATTCTACTGAAACT+TGG - chr8_1:22249773-22249792 None:intergenic 25.0%
!! ATTTTAAATTCTTTGGCGTT+TGG + chr8_1:22250055-22250074 Msa1185270:intron 25.0%
! AGGTATTTAGTCAATTAGTA+CGG + chr8_1:22250427-22250446 Msa1185270:intron 25.0%
! TTCTCATTTACACTACTTAA+AGG + chr8_1:22250488-22250507 Msa1185270:intron 25.0%
!! ATTATTGATTGTGTATACCA+TGG + chr8_1:22250513-22250532 Msa1185270:intron 25.0%
!! AATTGATTCAAATTCTGTCA+AGG + chr8_1:22250554-22250573 Msa1185270:CDS 25.0%
!! ATTGATTCAAATTCTGTCAA+GGG + chr8_1:22250555-22250574 Msa1185270:CDS 25.0%
! AGTTTGGAGATAAATTAACA+GGG + chr8_1:22250929-22250948 Msa1185270:intron 25.0%
! AAACTCTCCATAAATTAACA+CGG - chr8_1:22250971-22250990 None:intergenic 25.0%
! TATACATAAATAGTCATAGC+TGG - chr8_1:22251060-22251079 None:intergenic 25.0%
!! TTTCTATGCTCTTTTTCTTT+TGG + chr8_1:22251097-22251116 Msa1185270:intron 25.0%
! TCTTTCTTGACTATTCAAAA+AGG + chr8_1:22251351-22251370 Msa1185270:intron 25.0%
! CAATTCATCAAGATAACATA+AGG + chr8_1:22251387-22251406 Msa1185270:intron 25.0%
! AAAAGTCATGTTAACTTTGA+TGG - chr8_1:22251481-22251500 None:intergenic 25.0%
! AAAGAAAAGCAAAACTACAT+TGG - chr8_1:22251737-22251756 None:intergenic 25.0%
!! CTTTTCTTTTCCTTTGATAA+AGG + chr8_1:22251748-22251767 Msa1185270:intron 25.0%
!!! TAAAACTTTCATGTTTTTGC+AGG + chr8_1:22252064-22252083 Msa1185270:intron 25.0%
! TATACATAGTTATTCCAATG+TGG + chr8_1:22252161-22252180 Msa1185270:CDS 25.0%
!!! GTCAATTATTTTACTTGTCA+AGG + chr8_1:22252264-22252283 Msa1185270:intron 25.0%
! TACAAGAATTAAGCAATCAT+AGG - chr8_1:22252371-22252390 None:intergenic 25.0%
!! AAAAAGTTCAAATAGTCTTG+TGG - chr8_1:22252509-22252528 None:intergenic 25.0%
!!! TATTTGAACTTTTTCTGTCT+TGG + chr8_1:22252515-22252534 Msa1185270:CDS 25.0%
! AATATTCTCATGCATATCTA+TGG - chr8_1:22252552-22252571 None:intergenic 25.0%
! AAGAATTAAGACACTTTGAT+AGG - chr8_1:22252732-22252751 None:intergenic 25.0%
!!! AGCCTTTGAATAATTTGTTT+TGG + chr8_1:22252812-22252831 Msa1185270:intron 25.0%
! CTCCAAAACAAATTATTCAA+AGG - chr8_1:22252817-22252836 None:intergenic 25.0%
! GATGATGAATATGTGATAAT+TGG + chr8_1:22252943-22252962 Msa1185270:CDS 25.0%
! ATAGCTTTCATCAAACATAA+TGG + chr8_1:22253198-22253217 Msa1185270:intron 25.0%
!!! AAACAACTTAGTTTTTGACT+TGG - chr8_1:22253228-22253247 None:intergenic 25.0%
!!! GCTATCCTAGTTTTAATATA+AGG + chr8_1:22253429-22253448 Msa1185270:intron 25.0%
!! AGTTGGAAAAAATGATTTTC+AGG + chr8_1:22253500-22253519 Msa1185270:intron 25.0%
!! AGCTTTTCTATTTCAAGAAT+AGG - chr8_1:22253574-22253593 None:intergenic 25.0%
! AAATTGTTTCCAGTTCATTT+CGG - chr8_1:22253974-22253993 None:intergenic 25.0%
! TAATTACTATACACTGGATA+TGG - chr8_1:22254481-22254500 None:intergenic 25.0%
! AGGATTTAATTACTATACAC+TGG - chr8_1:22254487-22254506 None:intergenic 25.0%
! AAATGAAAGGAAGAAAAGTA+AGG - chr8_1:22254514-22254533 None:intergenic 25.0%
CTTTGTTACATATGCACAAA+AGG - chr8_1:22247157-22247176 None:intergenic 30.0%
!! TTTTGATTCATGGACAATCA+TGG + chr8_1:22247299-22247318 Msa1185270:exon 30.0%
GGATATGATTCATATGGATA+AGG - chr8_1:22247431-22247450 None:intergenic 30.0%
! TTTGGTGGATATGATTCATA+TGG - chr8_1:22247437-22247456 None:intergenic 30.0%
TAGAAGGAATGTGAAGAATT+TGG - chr8_1:22247455-22247474 None:intergenic 30.0%
CTCATAAGATCATTCAAATG+AGG - chr8_1:22247701-22247720 None:intergenic 30.0%
ATGTTCAGATATCTGATAAC+AGG + chr8_1:22247723-22247742 Msa1185270:CDS 30.0%
! GAAAAGAAAGAGGAGTTTTA+TGG + chr8_1:22247791-22247810 Msa1185270:CDS 30.0%
TTGAAATATTTGCTCTTGCA+TGG + chr8_1:22247962-22247981 Msa1185270:CDS 30.0%
TGCTAAGAATCTTCCAAATA+TGG + chr8_1:22248009-22248028 Msa1185270:CDS 30.0%
ATCTTATTACTCACATTACC+AGG - chr8_1:22248076-22248095 None:intergenic 30.0%
TCTTTATTGAATGCTGTAGT+TGG + chr8_1:22248145-22248164 Msa1185270:CDS 30.0%
!!! TGAAGTGCATTTTGTTGTTA+AGG + chr8_1:22248246-22248265 Msa1185270:CDS 30.0%
! TTCCATTGCTATTAAGGATA+GGG - chr8_1:22248360-22248379 None:intergenic 30.0%
! TTTCCATTGCTATTAAGGAT+AGG - chr8_1:22248361-22248380 None:intergenic 30.0%
ATCATTTATCATCAAGGAGT+TGG + chr8_1:22248442-22248461 Msa1185270:CDS 30.0%
! ACATATTTTCCATTGAGGAA+AGG + chr8_1:22248496-22248515 Msa1185270:CDS 30.0%
TTGATTAAGACTCTTGAACA+TGG + chr8_1:22248927-22248946 Msa1185270:intron 30.0%
! ACACCGATTAGAATATAAAG+AGG - chr8_1:22249202-22249221 None:intergenic 30.0%
ACACCAATTCGAATATAAAG+AGG - chr8_1:22249251-22249270 None:intergenic 30.0%
!! TGCACATATTAGTGTTGATT+CGG + chr8_1:22249298-22249317 Msa1185270:intron 30.0%
! AAAATTGTAGCATTTGTTGG+AGG + chr8_1:22249537-22249556 Msa1185270:CDS 30.0%
! AAATTGTAGCATTTGTTGGA+GGG + chr8_1:22249538-22249557 Msa1185270:CDS 30.0%
AAGATATTACCGTGAAAGTA+GGG - chr8_1:22249650-22249669 None:intergenic 30.0%
TAAGATATTACCGTGAAAGT+AGG - chr8_1:22249651-22249670 None:intergenic 30.0%
ATGTTCATGTAATCAAATGG+GGG - chr8_1:22249682-22249701 None:intergenic 30.0%
GATGTTCATGTAATCAAATG+GGG - chr8_1:22249683-22249702 None:intergenic 30.0%
GTGATGTTCATGTAATCAAA+TGG - chr8_1:22249685-22249704 None:intergenic 30.0%
! TTTCACAGTACATGTTTTCT+AGG + chr8_1:22249844-22249863 Msa1185270:intron 30.0%
TAATGTAGTTGTTAACTAGC+TGG + chr8_1:22249935-22249954 Msa1185270:intron 30.0%
GACATCTCTGATATATTTGT+AGG - chr8_1:22250012-22250031 None:intergenic 30.0%
!! GACTTGCATTCTAAAATTGA+CGG + chr8_1:22250216-22250235 Msa1185270:CDS 30.0%
!!! TGATGTTTTGACAAACTTTG+AGG + chr8_1:22250251-22250270 Msa1185270:CDS 30.0%
!!! TTCAACTTTTTTATCCCTGT+AGG - chr8_1:22250300-22250319 None:intergenic 30.0%
GGTATTTAGTCAATTAGTAC+GGG + chr8_1:22250428-22250447 Msa1185270:intron 30.0%
! TTTTTACAGAACCTTGTATG+TGG + chr8_1:22250722-22250741 Msa1185270:intron 30.0%
! TTTTACAGAACCTTGTATGT+GGG + chr8_1:22250723-22250742 Msa1185270:intron 30.0%
ATACAATTGGAGCCAAAATA+AGG + chr8_1:22250850-22250869 Msa1185270:CDS 30.0%
GAGTTTGGAGATAAATTAAC+AGG + chr8_1:22250928-22250947 Msa1185270:intron 30.0%
! TTTTGTGCCGTGTTAATTTA+TGG + chr8_1:22250961-22250980 Msa1185270:intron 30.0%
!!! ATTTTACCACTTAACTTGTG+TGG + chr8_1:22250993-22251012 Msa1185270:intron 30.0%
TCTAACTTGAAACGAGAAAA+AGG + chr8_1:22251260-22251279 Msa1185270:intron 30.0%
TTGAAACGAGAAAAAGGTAA+AGG + chr8_1:22251266-22251285 Msa1185270:intron 30.0%
CATAGCTGAATAATGAAGTT+TGG - chr8_1:22251317-22251336 None:intergenic 30.0%
! AGTCTAATTGTGTTGTTGAA+TGG + chr8_1:22251535-22251554 Msa1185270:intron 30.0%
AGTGAACTAAGAATGATAGT+TGG + chr8_1:22251614-22251633 Msa1185270:intron 30.0%
! AAGAATGATAGTTGGTTCAA+TGG + chr8_1:22251622-22251641 Msa1185270:intron 30.0%
CTTAACTCAAAGTTTCAAAC+AGG - chr8_1:22251702-22251721 None:intergenic 30.0%
!!! ATTATTTTAACGGTCTCTAG+AGG + chr8_1:22251878-22251897 Msa1185270:intron 30.0%
AGACCTAAAGATTAAAGAGT+TGG + chr8_1:22251943-22251962 Msa1185270:intron 30.0%
CATCCAACTCTTTAATCTTT+AGG - chr8_1:22251949-22251968 None:intergenic 30.0%
CTAAAGATTAAAGAGTTGGA+TGG + chr8_1:22251947-22251966 Msa1185270:intron 30.0%
TAAAGAGTTGGATGGAAATA+TGG + chr8_1:22251955-22251974 Msa1185270:intron 30.0%
AAATCTTAATTTACTACGCG+TGG - chr8_1:22252297-22252316 None:intergenic 30.0%
! CATGAGAATATTTCTGTATC+TGG + chr8_1:22252560-22252579 Msa1185270:CDS 30.0%
GGTAACAGAAAAATGTAACT+TGG - chr8_1:22252652-22252671 None:intergenic 30.0%
ACCATAGTACATATATACAC+AGG + chr8_1:22252669-22252688 Msa1185270:intron 30.0%
!! GCAATTGATTTTTATGTCTG+TGG + chr8_1:22252849-22252868 Msa1185270:intron 30.0%
ATGATTTACGTTCATTCGAA+AGG + chr8_1:22252910-22252929 Msa1185270:CDS 30.0%
TGTTTCGTTTACTTTCCTTT+CGG + chr8_1:22253243-22253262 Msa1185270:intron 30.0%
!!! AAACGAAAACGTTGATTTTG+AGG - chr8_1:22253313-22253332 None:intergenic 30.0%
TTTCAAGAATAGGTCATGTT+TGG - chr8_1:22253564-22253583 None:intergenic 30.0%
CTTGAAATAGAAAAGCTGAA+TGG + chr8_1:22253577-22253596 Msa1185270:intron 30.0%
! AGTATTACTCTAATTTTCGC+CGG + chr8_1:22253606-22253625 Msa1185270:intron 30.0%
!! TTTCTGAAACTCTACTATGT+AGG + chr8_1:22253843-22253862 Msa1185270:intron 30.0%
! CTTTTCTATCAACTTCTACA+GGG - chr8_1:22254041-22254060 None:intergenic 30.0%
!! AGAAGTTGATAGAAAAGGTA+AGG + chr8_1:22254044-22254063 Msa1185270:CDS 30.0%
AATGGTTAGATTCTCTTGAA+TGG - chr8_1:22254136-22254155 None:intergenic 30.0%
! AGTTTTTACATTCACATTGG+TGG + chr8_1:22254166-22254185 Msa1185270:three_prime_UTR 30.0%
! GTATCGACATTTCAGATTAA+AGG + chr8_1:22254269-22254288 Msa1185270:three_prime_UTR 30.0%
AGGAAGAAAAGTAAGGTAAA+AGG - chr8_1:22254507-22254526 None:intergenic 30.0%
!!! TTTTTCTTCTATTGGCTTAG+TGG + chr8_1:22254534-22254553 Msa1185270:three_prime_UTR 30.0%
TTTGTTGCATATGCACACAA+GGG - chr8_1:22247208-22247227 None:intergenic 35.0%
TAAGGGTTTGGATATCCATA+GGG - chr8_1:22247335-22247354 None:intergenic 35.0%
ATAAGGGTTTGGATATCCAT+AGG - chr8_1:22247336-22247355 None:intergenic 35.0%
GATATGGAGGATATGCATAA+GGG - chr8_1:22247352-22247371 None:intergenic 35.0%
! TATGGATCATGAGATGGATT+TGG - chr8_1:22247386-22247405 None:intergenic 35.0%
AAGGAATGTGAAGAATTTGG+TGG - chr8_1:22247452-22247471 None:intergenic 35.0%
!! CTAAAGGTTTTGGTGGATAA+GGG - chr8_1:22247478-22247497 None:intergenic 35.0%
!! TCTAAAGGTTTTGGTGGATA+AGG - chr8_1:22247479-22247498 None:intergenic 35.0%
!! GTAGGAAACTCTAAAGGTTT+TGG - chr8_1:22247488-22247507 None:intergenic 35.0%
TGAGAAGTAGGAAACTCTAA+AGG - chr8_1:22247494-22247513 None:intergenic 35.0%
! TTGAACCATCATTGATTGGA+GGG - chr8_1:22247553-22247572 None:intergenic 35.0%
! TTTGAACCATCATTGATTGG+AGG - chr8_1:22247554-22247573 None:intergenic 35.0%
TTGAACCATCACTAATTGGA+GGG - chr8_1:22247610-22247629 None:intergenic 35.0%
TTTGAACCATCACTAATTGG+AGG - chr8_1:22247611-22247630 None:intergenic 35.0%
! GAATAGGAATGTGTCATTAC+TGG - chr8_1:22247758-22247777 None:intergenic 35.0%
GGTTATGAACATTCTTACTC+TGG + chr8_1:22247839-22247858 Msa1185270:CDS 35.0%
CAAAATCTTTCAGCTTATCC+CGG + chr8_1:22247875-22247894 Msa1185270:CDS 35.0%
ATTGTTCCAGCTCAGTATAA+AGG + chr8_1:22247935-22247954 Msa1185270:CDS 35.0%
TTGTTCCAGCTCAGTATAAA+GGG + chr8_1:22247936-22247955 Msa1185270:CDS 35.0%
GATGTGTTTGGTAAATTTCC+TGG + chr8_1:22248055-22248074 Msa1185270:CDS 35.0%
TATTGAATGCTGTAGTTGGT+AGG + chr8_1:22248149-22248168 Msa1185270:CDS 35.0%
CAATAGCGAAAATCCTGTTT+GGG + chr8_1:22248186-22248205 Msa1185270:CDS 35.0%
TGTTGTTAAGGATAGTGATG+TGG + chr8_1:22248258-22248277 Msa1185270:CDS 35.0%
! TACTCAGGTGAAAAAGTACA+AGG + chr8_1:22248328-22248347 Msa1185270:CDS 35.0%
! ACTCAGGTGAAAAAGTACAA+GGG + chr8_1:22248329-22248348 Msa1185270:CDS 35.0%
TACCCTATCCTTAATAGCAA+TGG + chr8_1:22248355-22248374 Msa1185270:CDS 35.0%
! AAGGCTTTCCATTGCTATTA+AGG - chr8_1:22248366-22248385 None:intergenic 35.0%
TGATCAGTTTCTCTATTGGT+AGG - chr8_1:22248426-22248445 None:intergenic 35.0%
CTCAATGGAAAATATGTTCC+CGG - chr8_1:22248493-22248512 None:intergenic 35.0%
! TATTTTCCATTGAGGAAAGG+TGG + chr8_1:22248499-22248518 Msa1185270:CDS 35.0%
CATGATCAAGCATGACATTA+GGG - chr8_1:22248570-22248589 None:intergenic 35.0%
CTAATGTCATGCTTGATCAT+GGG + chr8_1:22248569-22248588 Msa1185270:CDS 35.0%
ATTATGTTCATGGACAGTGT+TGG + chr8_1:22248596-22248615 Msa1185270:CDS 35.0%
! AAGCGTTTGGTTTACATTAC+AGG + chr8_1:22248649-22248668 Msa1185270:CDS 35.0%
! AGCGTTTGGTTTACATTACA+GGG + chr8_1:22248650-22248669 Msa1185270:CDS 35.0%
! GCACAAAGTTAGGTTGTTAA+GGG + chr8_1:22248684-22248703 Msa1185270:CDS 35.0%
ATAACCAAGAATGCTTCTTG+AGG - chr8_1:22248815-22248834 None:intergenic 35.0%
!!! ATGTGATGTGGTACTTTTTC+CGG + chr8_1:22248877-22248896 Msa1185270:intron 35.0%
CATCTGATTTACATTCAGGA+TGG + chr8_1:22249016-22249035 Msa1185270:intron 35.0%
! TAAGGTTCAGTTTTGCTACT+TGG + chr8_1:22249375-22249394 Msa1185270:intron 35.0%
TCTTCTAATTCTCAGGAAGT+TGG + chr8_1:22249450-22249469 Msa1185270:intron 35.0%
! TGATAATGCGGACTACTTAA+TGG + chr8_1:22250154-22250173 Msa1185270:intron 35.0%
GCTCAAGATAGAAAGAATTC+CGG + chr8_1:22250341-22250360 Msa1185270:CDS 35.0%
GGATTATCATCACAAACACT+AGG - chr8_1:22250390-22250409 None:intergenic 35.0%
ATCGAAATATCTGCATTCCA+TGG - chr8_1:22250533-22250552 None:intergenic 35.0%
ACCTTTATTGATCCATCTCT+TGG - chr8_1:22250594-22250613 None:intergenic 35.0%
GATGGATCAATAAAGGTGAA+CGG + chr8_1:22250597-22250616 Msa1185270:intron 35.0%
ATGGATCAATAAAGGTGAAC+GGG + chr8_1:22250598-22250617 Msa1185270:intron 35.0%
!! TCATCGGTTCTTCATACAAT+TGG + chr8_1:22250837-22250856 Msa1185270:CDS 35.0%
TTGACACGAGAAAAAGGTAA+AGG - chr8_1:22251171-22251190 None:intergenic 35.0%
TCTAACTTGACACGAGAAAA+AGG - chr8_1:22251177-22251196 None:intergenic 35.0%
! CTAATTGTGTTGTTGAATGG+TGG + chr8_1:22251538-22251557 Msa1185270:intron 35.0%
AATCTTTGTCCTCACTTAGT+AGG - chr8_1:22251855-22251874 None:intergenic 35.0%
ATCTTTAGCGCAATTTCCAT+TGG - chr8_1:22252106-22252125 None:intergenic 35.0%
CCAAAATAGAATCCTTTGAG+TGG - chr8_1:22252212-22252231 None:intergenic 35.0%
! CCACTCAAAGGATTCTATTT+TGG + chr8_1:22252209-22252228 Msa1185270:CDS 35.0%
!!! TCAAAGGATTCTATTTTGGC+AGG + chr8_1:22252213-22252232 Msa1185270:CDS 35.0%
TTGTATTGCATTTCTTACCC+TGG + chr8_1:22252386-22252405 Msa1185270:intron 35.0%
! ATTCATACCTGTGGAGTATT+CGG - chr8_1:22252599-22252618 None:intergenic 35.0%
GAACATAGAATTCATACCTG+TGG - chr8_1:22252608-22252627 None:intergenic 35.0%
GCCTGTGTATATATGTACTA+TGG - chr8_1:22252673-22252692 None:intergenic 35.0%
TTGATAGGAAACCTAAGTGT+GGG - chr8_1:22252717-22252736 None:intergenic 35.0%
TTTGATAGGAAACCTAAGTG+TGG - chr8_1:22252718-22252737 None:intergenic 35.0%
GTGAAATGAATATGGCTCAT+AGG + chr8_1:22252761-22252780 Msa1185270:intron 35.0%
AAATGAATATGGCTCATAGG+TGG + chr8_1:22252764-22252783 Msa1185270:intron 35.0%
AATGAATATGGCTCATAGGT+GGG + chr8_1:22252765-22252784 Msa1185270:intron 35.0%
! TATGTCTGTGGTTTTTGATC+AGG + chr8_1:22252861-22252880 Msa1185270:intron 35.0%
CAAATAGTCGAAATAACCGA+CGG + chr8_1:22252884-22252903 Msa1185270:CDS 35.0%
CTACCAACCTGAATATACAT+GGG + chr8_1:22253029-22253048 Msa1185270:CDS 35.0%
TTTCTTGCCCATGTATATTC+AGG - chr8_1:22253039-22253058 None:intergenic 35.0%
AGAAAACATTCTTATCCACG+CGG + chr8_1:22253054-22253073 Msa1185270:CDS 35.0%
TGCGACAACTGAAACTTAAA+TGG - chr8_1:22253143-22253162 None:intergenic 35.0%
GTTTCGTTTACTTTCCTTTC+GGG + chr8_1:22253244-22253263 Msa1185270:intron 35.0%
TTTCGTTTACTTTCCTTTCG+GGG + chr8_1:22253245-22253264 Msa1185270:intron 35.0%
! GGTTCTAATCAAGAATATGG+AGG + chr8_1:22253266-22253285 Msa1185270:intron 35.0%
CAAATGCATATTTGCATTCC+AGG - chr8_1:22253356-22253375 None:intergenic 35.0%
TTTCACTAAAACCGAATAGC+CGG - chr8_1:22253628-22253647 None:intergenic 35.0%
TGACTTATTTAACGGCTATG+TGG + chr8_1:22253668-22253687 Msa1185270:intron 35.0%
AACTCTACTATGTAGGTTCA+TGG + chr8_1:22253850-22253869 Msa1185270:intron 35.0%
CTATGTAGGTTCATGGATAT+AGG + chr8_1:22253857-22253876 Msa1185270:intron 35.0%
ATGGATATAGGATGTCACTA+TGG + chr8_1:22253869-22253888 Msa1185270:CDS 35.0%
TGGATATAGGATGTCACTAT+GGG + chr8_1:22253870-22253889 Msa1185270:CDS 35.0%
! CCTTTTCTATCAACTTCTAC+AGG - chr8_1:22254042-22254061 None:intergenic 35.0%
!! CCTGTAGAAGTTGATAGAAA+AGG + chr8_1:22254039-22254058 Msa1185270:CDS 35.0%
! ACATTGGTGGTCATTAGAAT+AGG + chr8_1:22254179-22254198 Msa1185270:three_prime_UTR 35.0%
! CATTGGTGGTCATTAGAATA+GGG + chr8_1:22254180-22254199 Msa1185270:three_prime_UTR 35.0%
TGTATGTGTTTGTGCTTCAT+AGG + chr8_1:22254364-22254383 Msa1185270:three_prime_UTR 35.0%
GTATGTGTTTGTGCTTCATA+GGG + chr8_1:22254365-22254384 Msa1185270:three_prime_UTR 35.0%
! AATGCAATGCATGTTGATTG+AGG + chr8_1:22254450-22254469 Msa1185270:three_prime_UTR 35.0%
GTGTTTATTTGAGTAGGTGT+TGG - chr8_1:22254560-22254579 None:intergenic 35.0%
CACCTACTCAAATAAACACA+CGG + chr8_1:22254561-22254580 Msa1185270:three_prime_UTR 35.0%
CTTTGTTGCATATGCACACA+AGG - chr8_1:22247209-22247228 None:intergenic 40.0%
CTTGTGTGCATATGCAACAA+AGG + chr8_1:22247207-22247226 Msa1185270:five_prime_UTR 40.0%
GGATATGGAGGATATGCATA+AGG - chr8_1:22247353-22247372 None:intergenic 40.0%
TATGGATAAGGAGAAGATGC+TGG - chr8_1:22247419-22247438 None:intergenic 40.0%
!! TTTTGGTGGATAAGGGTAGA+AGG - chr8_1:22247471-22247490 None:intergenic 40.0%
!! GGAAACTCTAAAGGTTTTGG+TGG - chr8_1:22247485-22247504 None:intergenic 40.0%
!! TTGGAGGGTATTGTTGGTAA+GGG - chr8_1:22247538-22247557 None:intergenic 40.0%
!! ATTGGAGGGTATTGTTGGTA+AGG - chr8_1:22247539-22247558 None:intergenic 40.0%
!! CATTGATTGGAGGGTATTGT+TGG - chr8_1:22247544-22247563 None:intergenic 40.0%
CAATACCCTCCAATCAATGA+TGG + chr8_1:22247545-22247564 Msa1185270:CDS 40.0%
GGGTTTGAACCATCATTGAT+TGG - chr8_1:22247557-22247576 None:intergenic 40.0%
!! TAATTGGAGGGTATTGGTGA+GGG - chr8_1:22247598-22247617 None:intergenic 40.0%
! CATCACTAATTGGAGGGTAT+TGG - chr8_1:22247604-22247623 None:intergenic 40.0%
CAATACCCTCCAATTAGTGA+TGG + chr8_1:22247602-22247621 Msa1185270:CDS 40.0%
GGGTTTGAACCATCACTAAT+TGG - chr8_1:22247614-22247633 None:intergenic 40.0%
!! TAATTGGAGGGTATTGGTGA+GGG - chr8_1:22247598-22247617 None:intergenic 40.0%
! CATCACTAATTGGAGGGTAT+TGG - chr8_1:22247604-22247623 None:intergenic 40.0%
CAATACCCTCCAATTAGTGA+TGG + chr8_1:22247602-22247621 Msa1185270:CDS 40.0%
GTGAACCATCACTAATTGGA+GGG - chr8_1:22247655-22247674 None:intergenic 40.0%
TGTGAACCATCACTAATTGG+AGG - chr8_1:22247656-22247675 None:intergenic 40.0%
GCATGTGAACCATCACTAAT+TGG - chr8_1:22247659-22247678 None:intergenic 40.0%
AAATGAGGGTAAGCAGAACT+AGG - chr8_1:22247686-22247705 None:intergenic 40.0%
TGAACATTCTTACTCTGGTG+TGG + chr8_1:22247844-22247863 Msa1185270:CDS 40.0%
GAACATTCTTACTCTGGTGT+GGG + chr8_1:22247845-22247864 Msa1185270:CDS 40.0%
AACATTCTTACTCTGGTGTG+GGG + chr8_1:22247846-22247865 Msa1185270:CDS 40.0%
AATGACCCTTTATACTGAGC+TGG - chr8_1:22247944-22247963 None:intergenic 40.0%
! AAGACTTTAGGGGATGTGTT+TGG + chr8_1:22248043-22248062 Msa1185270:CDS 40.0%
GCAATAGCGAAAATCCTGTT+TGG + chr8_1:22248185-22248204 Msa1185270:CDS 40.0%
GTTAAGGATAGTGATGTGGT+AGG + chr8_1:22248262-22248281 Msa1185270:CDS 40.0%
!! TATTGGTGTTGTAGCGATTC+CGG + chr8_1:22248294-22248313 Msa1185270:CDS 40.0%
CCTGAGTATAATTGTTCGAC+CGG - chr8_1:22248316-22248335 None:intergenic 40.0%
CTCTATTGGTAGGAACTGAA+TGG - chr8_1:22248416-22248435 None:intergenic 40.0%
! CGGGAACATATTTTCCATTG+AGG + chr8_1:22248491-22248510 Msa1185270:CDS 40.0%
CCATGATCAAGCATGACATT+AGG - chr8_1:22248571-22248590 None:intergenic 40.0%
CCTAATGTCATGCTTGATCA+TGG + chr8_1:22248568-22248587 Msa1185270:CDS 40.0%
CATGGGATGCATTATGTTCA+TGG + chr8_1:22248586-22248605 Msa1185270:CDS 40.0%
! GTTTGGTTTACATTACAGGG+TGG + chr8_1:22248653-22248672 Msa1185270:CDS 40.0%
! GGCACAAAGTTAGGTTGTTA+AGG + chr8_1:22248683-22248702 Msa1185270:CDS 40.0%
!! TGAGAGTGCTTCTTCTTGTT+TGG + chr8_1:22248779-22248798 Msa1185270:CDS 40.0%
!! GAGAGTGCTTCTTCTTGTTT+GGG + chr8_1:22248780-22248799 Msa1185270:CDS 40.0%
CAAGAATGCTTCTTGAGGTA+GGG - chr8_1:22248810-22248829 None:intergenic 40.0%
! TTACATTCAGGATGGTGTCA+TGG + chr8_1:22249024-22249043 Msa1185270:intron 40.0%
GTAATTGTAGATGCTGATGC+TGG + chr8_1:22249501-22249520 Msa1185270:CDS 40.0%
GGTTGTGATAGTCATCCTTA+TGG - chr8_1:22249629-22249648 None:intergenic 40.0%
CTATCACAACCCTACTTTCA+CGG + chr8_1:22249638-22249657 Msa1185270:CDS 40.0%
!! GTAGGAAAATTTTAGCCGCA+CGG - chr8_1:22249994-22250013 None:intergenic 40.0%
! TTGGTAGCTAGGAAATAGGA+AGG + chr8_1:22250074-22250093 Msa1185270:intron 40.0%
ACTTAATGGCAGGGTAATAC+TGG + chr8_1:22250168-22250187 Msa1185270:intron 40.0%
GTCAAAACATCATAAGCTGC+TGG - chr8_1:22250243-22250262 None:intergenic 40.0%
TCAGATACACGGAGAATATC+CGG - chr8_1:22250363-22250382 None:intergenic 40.0%
GCCAAGAGATGGATCAATAA+AGG + chr8_1:22250590-22250609 Msa1185270:CDS 40.0%
ATCAATAAAGGTGAACGGGA+AGG + chr8_1:22250602-22250621 Msa1185270:intron 40.0%
TCAATAAAGGTGAACGGGAA+GGG + chr8_1:22250603-22250622 Msa1185270:intron 40.0%
CACATATGGTGGCTTAAATC+TGG - chr8_1:22250658-22250677 None:intergenic 40.0%
AACACTCGTTGTCACACATA+TGG - chr8_1:22250672-22250691 None:intergenic 40.0%
GTACATTCTTCCCACATACA+AGG - chr8_1:22250736-22250755 None:intergenic 40.0%
CATACACACAGCGTATGTAA+AGG + chr8_1:22250769-22250788 Msa1185270:CDS 40.0%
TGGAGCCAAAATAAGGACAT+CGG + chr8_1:22250857-22250876 Msa1185270:CDS 40.0%
!! CCTTACCGATGTCCTTATTT+TGG - chr8_1:22250865-22250884 None:intergenic 40.0%
CCAAAATAAGGACATCGGTA+AGG + chr8_1:22250862-22250881 Msa1185270:intron 40.0%
! TGCTTGCTTGTTGAAGAGTT+TGG + chr8_1:22250913-22250932 Msa1185270:intron 40.0%
!! TCCTTTGATAAAGGCACTGA+AGG + chr8_1:22251757-22251776 Msa1185270:intron 40.0%
ACCTTCAGTGCCTTTATCAA+AGG - chr8_1:22251761-22251780 None:intergenic 40.0%
!! TTGATAAAGGCACTGAAGGT+TGG + chr8_1:22251761-22251780 Msa1185270:intron 40.0%
!! GGACAATTTGCTGTAGGTTA+AGG - chr8_1:22251790-22251809 None:intergenic 40.0%
!! TGAGTTGGACAATTTGCTGT+AGG - chr8_1:22251796-22251815 None:intergenic 40.0%
ATCGAGAAAAGCCACTAAAG+TGG - chr8_1:22251830-22251849 None:intergenic 40.0%
GCAATCATAGGAGCTATCAT+AGG - chr8_1:22252359-22252378 None:intergenic 40.0%
GATGTACGAGACAGTTTACA+AGG + chr8_1:22252448-22252467 Msa1185270:CDS 40.0%
!! TACAAGGCATTGGTTGAAGT+TGG + chr8_1:22252464-22252483 Msa1185270:CDS 40.0%
!! ACAAGGCATTGGTTGAAGTT+GGG + chr8_1:22252465-22252484 Msa1185270:CDS 40.0%
AACTTGGAAACCCAGAACTA+GGG - chr8_1:22252636-22252655 None:intergenic 40.0%
TAACTTGGAAACCCAGAACT+AGG - chr8_1:22252637-22252656 None:intergenic 40.0%
ATGAATATGGCTCATAGGTG+GGG + chr8_1:22252766-22252785 Msa1185270:intron 40.0%
GAACGTAAATCATGAACCGT+CGG - chr8_1:22252903-22252922 None:intergenic 40.0%
!! CCATGTATATTCAGGTTGGT+AGG - chr8_1:22253031-22253050 None:intergenic 40.0%
CCTACCAACCTGAATATACA+TGG + chr8_1:22253028-22253047 Msa1185270:CDS 40.0%
TTGCCCATGTATATTCAGGT+TGG - chr8_1:22253035-22253054 None:intergenic 40.0%
TTCTTGATTAGAACCCCGAA+AGG - chr8_1:22253261-22253280 None:intergenic 40.0%
! CGGGGTTCTAATCAAGAATA+TGG + chr8_1:22253263-22253282 Msa1185270:intron 40.0%
!!! AAAACGTTGATTTTGAGGCC+TGG - chr8_1:22253308-22253327 None:intergenic 40.0%
CAACCAGTGTTGTCAAACAA+CGG + chr8_1:22253377-22253396 Msa1185270:intron 40.0%
GTTGTCAAACAACGGCAATA+AGG + chr8_1:22253385-22253404 Msa1185270:intron 40.0%
GTTTCTGCTAGTAGATGTAG+CGG + chr8_1:22253473-22253492 Msa1185270:intron 40.0%
!! TCTAATTTTCGCCGGCTATT+CGG + chr8_1:22253614-22253633 Msa1185270:intron 40.0%
GAACAATGTCCGAAATGAAC+TGG + chr8_1:22253962-22253981 Msa1185270:CDS 40.0%
TCAAGAAGAGTTTCCTGATG+TGG + chr8_1:22254083-22254102 Msa1185270:CDS 40.0%
CAAGAAGAGTTTCCTGATGT+GGG + chr8_1:22254084-22254103 Msa1185270:CDS 40.0%
TGTTCAGTGTCTCAAACATG+TGG + chr8_1:22254294-22254313 Msa1185270:three_prime_UTR 40.0%
CTCCGTGTGTTTATTTGAGT+AGG - chr8_1:22254566-22254585 None:intergenic 40.0%
ACTCAAATAAACACACGGAG+TGG + chr8_1:22254566-22254585 Msa1185270:three_prime_UTR 40.0%
CTCAAATAAACACACGGAGT+GGG + chr8_1:22254567-22254586 Msa1185270:three_prime_UTR 40.0%
GGAATCTTAAGTTCGAACCT+GGG - chr8_1:22254606-22254625 None:intergenic 40.0%
TGGAATCTTAAGTTCGAACC+TGG - chr8_1:22254607-22254626 None:intergenic 40.0%
! TCGCATGCACACATTTTATG+TGG - chr8_1:22254627-22254646 None:intergenic 40.0%
AAAATGTGTGCATGCGACAA+CGG + chr8_1:22254630-22254649 Msa1185270:three_prime_UTR 40.0%
! TTCATTTGGTCTTTGTCTGC+AGG + chr8_1:22254689-22254708 Msa1185270:three_prime_UTR 40.0%
GGAGGATATGCATAAGGGTT+TGG - chr8_1:22247347-22247366 None:intergenic 45.0%
! TTTGGAGGAGGGTATGGATA+TGG - chr8_1:22247368-22247387 None:intergenic 45.0%
! CATGAGATGGATTTGGAGGA+GGG - chr8_1:22247379-22247398 None:intergenic 45.0%
! TCATGAGATGGATTTGGAGG+AGG - chr8_1:22247380-22247399 None:intergenic 45.0%
! GGATCATGAGATGGATTTGG+AGG - chr8_1:22247383-22247402 None:intergenic 45.0%
GGTGCATATGGATCATGAGA+TGG - chr8_1:22247392-22247411 None:intergenic 45.0%
GCATGAGATGGTTGAGAAGT+AGG - chr8_1:22247506-22247525 None:intergenic 45.0%
GGGTAAGGATAAGCATGAGA+TGG - chr8_1:22247518-22247537 None:intergenic 45.0%
! GGGTATTGTTGGTAAGGGTA+AGG - chr8_1:22247533-22247552 None:intergenic 45.0%
GGTAAGGAGAACTATGAGGA+GGG - chr8_1:22247577-22247596 None:intergenic 45.0%
TGAGGGTAAGGAGAACTATG+AGG - chr8_1:22247581-22247600 None:intergenic 45.0%
!! CTAATTGGAGGGTATTGGTG+AGG - chr8_1:22247599-22247618 None:intergenic 45.0%
!! CTAATTGGAGGGTATTGGTG+AGG - chr8_1:22247599-22247618 None:intergenic 45.0%
! TGTGTCATTACTGGTGCACT+TGG - chr8_1:22247749-22247768 None:intergenic 45.0%
ACATTCTTACTCTGGTGTGG+GGG + chr8_1:22247847-22247866 Msa1185270:CDS 45.0%
TCCCGGTTCAAATGATGACT+CGG + chr8_1:22247892-22247911 Msa1185270:CDS 45.0%
ACCGAGTCATCATTTGAACC+GGG - chr8_1:22247896-22247915 None:intergenic 45.0%
CACCGAGTCATCATTTGAAC+CGG - chr8_1:22247897-22247916 None:intergenic 45.0%
CTGGAACAATCTGCAAACTC+TGG - chr8_1:22247925-22247944 None:intergenic 45.0%
AGATTGAGGGAACAGTGACT+AGG + chr8_1:22248092-22248111 Msa1185270:CDS 45.0%
!! TGAAAGTGTTGCTCCCAAAC+AGG - chr8_1:22248202-22248221 None:intergenic 45.0%
GTGGTAGGTTCACAGCTTAT+TGG + chr8_1:22248277-22248296 Msa1185270:CDS 45.0%
CCGGTCGAACAATTATACTC+AGG + chr8_1:22248313-22248332 Msa1185270:CDS 45.0%
! AATGGAAAGCCTTGTAAGCC+AGG + chr8_1:22248373-22248392 Msa1185270:CDS 45.0%
AAAACAGCACCTGGCTTACA+AGG - chr8_1:22248385-22248404 None:intergenic 45.0%
GTAACACTCAAAACAGCACC+TGG - chr8_1:22248394-22248413 None:intergenic 45.0%
TATCATCAAGGAGTTGGAGC+AGG + chr8_1:22248448-22248467 Msa1185270:CDS 45.0%
ACCGAACTATATTGGTGTGC+CGG + chr8_1:22248471-22248490 Msa1185270:CDS 45.0%
ACAGTTCCACCTTTCCTCAA+TGG - chr8_1:22248508-22248527 None:intergenic 45.0%
CAAGATGCTCATGTTCCAGA+TGG + chr8_1:22248538-22248557 Msa1185270:CDS 45.0%
ACATTAGGGAGACATCCATC+TGG - chr8_1:22248556-22248575 None:intergenic 45.0%
CAACCTAACTTTGTGCCACA+CGG - chr8_1:22248680-22248699 None:intergenic 45.0%
GTATAATCCGATGCCTTACC+AGG - chr8_1:22248721-22248740 None:intergenic 45.0%
!! AAGGCATCGGATTATACCCT+TGG + chr8_1:22248724-22248743 Msa1185270:CDS 45.0%
CCAAGAATGCTTCTTGAGGT+AGG - chr8_1:22248811-22248830 None:intergenic 45.0%
!! CCTACCTCAAGAAGCATTCT+TGG + chr8_1:22248808-22248827 Msa1185270:CDS 45.0%
TGCGAGGACAAAGTAACACT+TGG - chr8_1:22249096-22249115 None:intergenic 45.0%
!! AGTGTTACTTTGTCCTCGCA+TGG + chr8_1:22249096-22249115 Msa1185270:CDS 45.0%
! AGCCCAGCTATGTCTTTTTC+CGG - chr8_1:22249122-22249141 None:intergenic 45.0%
!! GATGGTGGGGAGTATCATAT+CGG - chr8_1:22249581-22249600 None:intergenic 45.0%
TGTCTGCAGTGTCCTAAAGA+GGG - chr8_1:22249604-22249623 None:intergenic 45.0%
!! TAGTCATTTCTAGCACCGTG+CGG + chr8_1:22249976-22249995 Msa1185270:intron 45.0%
! TTCTTTGGCGTTTGGTAGCT+AGG + chr8_1:22250063-22250082 Msa1185270:intron 45.0%
! GCGTTTGGTAGCTAGGAAAT+AGG + chr8_1:22250070-22250089 Msa1185270:intron 45.0%
GGAAATAGGAAGGAACCAAC+AGG + chr8_1:22250084-22250103 Msa1185270:intron 45.0%
! AATGCGGACTACTTAATGGC+AGG + chr8_1:22250158-22250177 Msa1185270:intron 45.0%
! ATGCGGACTACTTAATGGCA+GGG + chr8_1:22250159-22250178 Msa1185270:intron 45.0%
TAATGGCAGGGTAATACTGG+TGG + chr8_1:22250171-22250190 Msa1185270:intron 45.0%
GTAATACTGGTGGTTGTCCA+CGG + chr8_1:22250181-22250200 Msa1185270:CDS 45.0%
TAATACTGGTGGTTGTCCAC+GGG + chr8_1:22250182-22250201 Msa1185270:CDS 45.0%
TTAGAATGCAAGTCGTGCCA+CGG - chr8_1:22250210-22250229 None:intergenic 45.0%
TTAAGAGCTGCGAAACCTAC+AGG + chr8_1:22250282-22250301 Msa1185270:CDS 45.0%
TAAGAGCTGCGAAACCTACA+GGG + chr8_1:22250283-22250302 Msa1185270:CDS 45.0%
!! CACTAGGAGCATCAGATACA+CGG - chr8_1:22250374-22250393 None:intergenic 45.0%
GTGATGATAATCCTGCAGCT+TGG + chr8_1:22250397-22250416 Msa1185270:CDS 45.0%
TTCTGTCAAGGGATTTCCGA+AGG + chr8_1:22250566-22250585 Msa1185270:CDS 45.0%
ACTCGTTGTCACACATATGG+TGG - chr8_1:22250669-22250688 None:intergenic 45.0%
GTAATGTTGTGCAGCACGAA+TGG - chr8_1:22250795-22250814 None:intergenic 45.0%
!! ACCACTTAACTTGTGTGGCT+AGG + chr8_1:22250998-22251017 Msa1185270:intron 45.0%
TCCTAGCCACACAAGTTAAG+TGG - chr8_1:22251002-22251021 None:intergenic 45.0%
ACACAATTAGACTCTCGTCG+AGG - chr8_1:22251528-22251547 None:intergenic 45.0%
ATTGTCCAACTCATCACCGT+TGG + chr8_1:22251803-22251822 Msa1185270:intron 45.0%
AAGCCACTAAAGTGGTCCAA+CGG - chr8_1:22251822-22251841 None:intergenic 45.0%
TCTCGATGACCTACTAAGTG+AGG + chr8_1:22251843-22251862 Msa1185270:intron 45.0%
CGGCTACATGGATCAAACAA+TGG - chr8_1:22252000-22252019 None:intergenic 45.0%
CTTATCCCACCAAGTGAGAT+CGG - chr8_1:22252020-22252039 None:intergenic 45.0%
AGTTATTCCAATGTGGCCAG+AGG + chr8_1:22252168-22252187 Msa1185270:CDS 45.0%
GTTATTCCAATGTGGCCAGA+GGG + chr8_1:22252169-22252188 Msa1185270:CDS 45.0%
CGAGACAGTTTACAAGGCAT+TGG + chr8_1:22252454-22252473 Msa1185270:CDS 45.0%
! ATACCTGTGGAGTATTCGGT+GGG - chr8_1:22252595-22252614 None:intergenic 45.0%
ATACACACACACCCACACTT+AGG + chr8_1:22252703-22252722 Msa1185270:intron 45.0%
AAACATCAACCAGCGCTCTA+TGG + chr8_1:22252972-22252991 Msa1185270:CDS 45.0%
AAGGGACACTGAGATTGCAA+TGG + chr8_1:22253002-22253021 Msa1185270:CDS 45.0%
AGGGACACTGAGATTGCAAT+GGG + chr8_1:22253003-22253022 Msa1185270:CDS 45.0%
TTGCCGTTGTTTGACAACAC+TGG - chr8_1:22253383-22253402 None:intergenic 45.0%
GTAGATGTAGCGGCAATAGT+TGG + chr8_1:22253483-22253502 Msa1185270:intron 45.0%
TCACTATGGGCAGAACATAC+AGG + chr8_1:22253883-22253902 Msa1185270:CDS 45.0%
AACGATGTGACAGAGATGAG+AGG + chr8_1:22254000-22254019 Msa1185270:CDS 45.0%
ACGATGTGACAGAGATGAGA+GGG + chr8_1:22254001-22254020 Msa1185270:CDS 45.0%
AACTCTTCTTGACCAGGAAG+AGG - chr8_1:22254075-22254094 None:intergenic 45.0%
TCAGGAAACTCTTCTTGACC+AGG - chr8_1:22254081-22254100 None:intergenic 45.0%
ACTATCTTTCCTCCCACATC+AGG - chr8_1:22254099-22254118 None:intergenic 45.0%
GATGTGGGAGGAAAGATAGT+AGG + chr8_1:22254099-22254118 Msa1185270:CDS 45.0%
ACTACATCACAACTCTTCCC+TGG - chr8_1:22254251-22254270 None:intergenic 45.0%
! GTGTCGACATGTGTCGTATT+TGG + chr8_1:22254341-22254360 Msa1185270:three_prime_UTR 45.0%
GGGTTTGGATATCCATAGGG+AGG - chr8_1:22247332-22247351 None:intergenic 50.0%
! GATGGATTTGGAGGAGGGTA+TGG - chr8_1:22247374-22247393 None:intergenic 50.0%
TAAGGAGAAGATGCTGGTGG+AGG - chr8_1:22247413-22247432 None:intergenic 50.0%
GGATAAGGAGAAGATGCTGG+TGG - chr8_1:22247416-22247435 None:intergenic 50.0%
GGGTAAGGAGAACTATGAGG+AGG - chr8_1:22247578-22247597 None:intergenic 50.0%
!! GGTATTGGTGAGGGTAAGGA+GGG - chr8_1:22247589-22247608 None:intergenic 50.0%
TGAGGGTAAGCAGAACTAGG+AGG - chr8_1:22247683-22247702 None:intergenic 50.0%
CATTCTTACTCTGGTGTGGG+GGG + chr8_1:22247848-22247867 Msa1185270:CDS 50.0%
GGAGCAGGACCGAACTATAT+TGG + chr8_1:22248463-22248482 Msa1185270:CDS 50.0%
CCCGGCACACCAATATAGTT+CGG - chr8_1:22248475-22248494 None:intergenic 50.0%
CCGAACTATATTGGTGTGCC+GGG + chr8_1:22248472-22248491 Msa1185270:CDS 50.0%
!! TGGACAGTGTTGGCGTGATA+TGG + chr8_1:22248606-22248625 Msa1185270:CDS 50.0%
CAAACGCTTCGCTTGACGTA+TGG - chr8_1:22248638-22248657 None:intergenic 50.0%
! CATACGTCAAGCGAAGCGTT+TGG + chr8_1:22248636-22248655 Msa1185270:CDS 50.0%
AGGTTGTTAAGGGACGCTGT+TGG + chr8_1:22248694-22248713 Msa1185270:CDS 50.0%
TGTTGGACCTGGTAAGGCAT+CGG + chr8_1:22248711-22248730 Msa1185270:CDS 50.0%
ATACCCTTGGTGAGCTTCTG+AGG + chr8_1:22248737-22248756 Msa1185270:CDS 50.0%
AGACCTCAGAAGCTCACCAA+GGG - chr8_1:22248743-22248762 None:intergenic 50.0%
TAGACCTCAGAAGCTCACCA+AGG - chr8_1:22248744-22248763 None:intergenic 50.0%
!! GCTTCTGAGGTCTAAGTCTC+AGG + chr8_1:22248750-22248769 Msa1185270:CDS 50.0%
CTGAGGTCTAAGTCTCAGGA+AGG + chr8_1:22248754-22248773 Msa1185270:CDS 50.0%
TTACTTTGTCCTCGCATGGC+CGG + chr8_1:22249100-22249119 Msa1185270:CDS 50.0%
TGGCCGGAAAAAGACATAGC+TGG + chr8_1:22249116-22249135 Msa1185270:CDS 50.0%
GGCCGGAAAAAGACATAGCT+GGG + chr8_1:22249117-22249136 Msa1185270:CDS 50.0%
ACATAGCTGGGCTAAGCAAC+AGG + chr8_1:22249129-22249148 Msa1185270:CDS 50.0%
!! GGAGGGCTTGATTTGTGTGA+CGG + chr8_1:22249555-22249574 Msa1185270:CDS 50.0%
TGTCCTAAAGAGGGGATGGT+GGG - chr8_1:22249595-22249614 None:intergenic 50.0%
GTCTGCAGTGTCCTAAAGAG+GGG - chr8_1:22249603-22249622 None:intergenic 50.0%
CTGTCTGCAGTGTCCTAAAG+AGG - chr8_1:22249605-22249624 None:intergenic 50.0%
GACACTGCAGACAGTCCATA+AGG + chr8_1:22249611-22249630 Msa1185270:CDS 50.0%
! TGACAAACTTTGAGGAGCGC+TGG + chr8_1:22250259-22250278 Msa1185270:CDS 50.0%
TTTCCGAAGGAGCCAAGAGA+TGG + chr8_1:22250579-22250598 Msa1185270:CDS 50.0%
GATCCATCTCTTGGCTCCTT+CGG - chr8_1:22250585-22250604 None:intergenic 50.0%
TCACCGTTGGACCACTTTAG+TGG + chr8_1:22251816-22251835 Msa1185270:intron 50.0%
! TTAACGGTCTCTAGAGGCAG+AGG + chr8_1:22251884-22251903 Msa1185270:intron 50.0%
TCCATGTAGCCGATCTCACT+TGG + chr8_1:22252008-22252027 Msa1185270:intron 50.0%
ACCAAGTGAGATCGGCTACA+TGG - chr8_1:22252012-22252031 None:intergenic 50.0%
ATGTAGCCGATCTCACTTGG+TGG + chr8_1:22252011-22252030 Msa1185270:intron 50.0%
TGTAGCCGATCTCACTTGGT+GGG + chr8_1:22252012-22252031 Msa1185270:intron 50.0%
! CGATCTCACTTGGTGGGATA+AGG + chr8_1:22252018-22252037 Msa1185270:intron 50.0%
! TCACTTGGTGGGATAAGGCT+TGG + chr8_1:22252023-22252042 Msa1185270:intron 50.0%
! TACCTGTGGAGTATTCGGTG+GGG - chr8_1:22252594-22252613 None:intergenic 50.0%
! CATACCTGTGGAGTATTCGG+TGG - chr8_1:22252596-22252615 None:intergenic 50.0%
ATGTTCCCTCTCCCTAGTTC+TGG + chr8_1:22252622-22252641 Msa1185270:intron 50.0%
! TGTTCCCTCTCCCTAGTTCT+GGG + chr8_1:22252623-22252642 Msa1185270:intron 50.0%
GAAACCCAGAACTAGGGAGA+GGG - chr8_1:22252630-22252649 None:intergenic 50.0%
ATCAACCAGCGCTCTATGGA+AGG + chr8_1:22252976-22252995 Msa1185270:CDS 50.0%
TTGTTCCTTCCATAGAGCGC+TGG - chr8_1:22252984-22253003 None:intergenic 50.0%
AGCGCTCTATGGAAGGAACA+AGG + chr8_1:22252983-22253002 Msa1185270:CDS 50.0%
GCGCTCTATGGAAGGAACAA+GGG + chr8_1:22252984-22253003 Msa1185270:CDS 50.0%
ACATTCTTATCCACGCGGAC+AGG + chr8_1:22253059-22253078 Msa1185270:CDS 50.0%
AAAACGTATACCTGTCCGCG+TGG - chr8_1:22253072-22253091 None:intergenic 50.0%
!!! GATTTTGAGGCCTGGTGATG+AGG - chr8_1:22253300-22253319 None:intergenic 50.0%
GGTAAGGTTAGACCTCTTCC+TGG + chr8_1:22254060-22254079 Msa1185270:CDS 50.0%
GAAGAGTTTCCTGATGTGGG+AGG + chr8_1:22254087-22254106 Msa1185270:CDS 50.0%
! CATGGTTCTGCACCTCCCTA+TGG + chr8_1:22247317-22247336 Msa1185270:CDS 55.0%
! GGAGGAGGGTATGGATATGG+AGG - chr8_1:22247365-22247384 None:intergenic 55.0%
! GATGCTGGTGGAGGTGCATA+TGG - chr8_1:22247404-22247423 None:intergenic 55.0%
!! GGAGGGTATTGGTGAGGGTA+AGG - chr8_1:22247593-22247612 None:intergenic 55.0%
!! GGGTATTGGTGAGGGTAAGG+AGG - chr8_1:22247590-22247609 None:intergenic 55.0%
!! GGAGGGTATTGGTGAGGGTA+AGG - chr8_1:22247593-22247612 None:intergenic 55.0%
TCAGCAGCATGATGCGCAAC+AGG - chr8_1:22248229-22248248 None:intergenic 55.0%
ACATTACAGGGTGGTCCGTG+TGG + chr8_1:22248662-22248681 Msa1185270:CDS 55.0%
GGTCCGTGTGGCACAAAGTT+AGG + chr8_1:22248674-22248693 Msa1185270:CDS 55.0%
TTAAGGGACGCTGTTGGACC+TGG + chr8_1:22248700-22248719 Msa1185270:CDS 55.0%
TGTCATGGCGACGCATGATG+AGG + chr8_1:22249039-22249058 Msa1185270:CDS 55.0%
! TGTCTTTTTCCGGCCATGCG+AGG - chr8_1:22249112-22249131 None:intergenic 55.0%
GCTGGGCTAAGCAACAGGTT+TGG + chr8_1:22249134-22249153 Msa1185270:intron 55.0%
GTCCTAAAGAGGGGATGGTG+GGG - chr8_1:22249594-22249613 None:intergenic 55.0%
GTGTCCTAAAGAGGGGATGG+TGG - chr8_1:22249596-22249615 None:intergenic 55.0%
GCAGTGTCCTAAAGAGGGGA+TGG - chr8_1:22249599-22249618 None:intergenic 55.0%
GTGGTCCAACGGTGATGAGT+TGG - chr8_1:22251811-22251830 None:intergenic 55.0%
CTTTGAGTGGCAGCACCTGT+TGG - chr8_1:22252199-22252218 None:intergenic 55.0%
! CAACAGGTGCTGCCACTCAA+AGG + chr8_1:22252197-22252216 Msa1185270:CDS 55.0%
! ACCTGTGGAGTATTCGGTGG+GGG - chr8_1:22252593-22252612 None:intergenic 55.0%
GGAAACCCAGAACTAGGGAG+AGG - chr8_1:22252631-22252650 None:intergenic 55.0%
GGCAACCAAACCTCATCACC+AGG + chr8_1:22253287-22253306 Msa1185270:intron 55.0%
! TGAGGCCTGGTGATGAGGTT+TGG - chr8_1:22253295-22253314 None:intergenic 55.0%
AGAGCCTCGACTGTGTGAGA+AGG + chr8_1:22253935-22253954 Msa1185270:CDS 55.0%
GAGCCTCGACTGTGTGAGAA+GGG + chr8_1:22253936-22253955 Msa1185270:CDS 55.0%
GAACCCTTCTCACACAGTCG+AGG - chr8_1:22253942-22253961 None:intergenic 55.0%
!! GGCGGAAGCACTATAGCACT+AGG - chr8_1:22254218-22254237 None:intergenic 55.0%
ATAGTGCTTCCGCCTTAGCG+AGG + chr8_1:22254224-22254243 Msa1185270:three_prime_UTR 55.0%
CACACGGAGTGGGAGAAATG+TGG + chr8_1:22254577-22254596 Msa1185270:three_prime_UTR 55.0%
TGGGAGAAATGTGGTGACCC+AGG + chr8_1:22254586-22254605 Msa1185270:three_prime_UTR 55.0%
GGACGCTGTTGGACCTGGTA+AGG + chr8_1:22248705-22248724 Msa1185270:CDS 60.0%
CTCCCCACCATCCCCTCTTT+AGG + chr8_1:22249589-22249608 Msa1185270:CDS 60.0%
TCCTGCAGCTTGGCATGCTC+AGG + chr8_1:22250407-22250426 Msa1185270:CDS 60.0%
ACCTGAGCATGCCAAGCTGC+AGG - chr8_1:22250411-22250430 None:intergenic 60.0%
GGAACACCCTCTGGCCACAT+TGG - chr8_1:22252178-22252197 None:intergenic 60.0%
!! TGGCCAGAGGGTGTTCCAAC+AGG + chr8_1:22252181-22252200 Msa1185270:CDS 60.0%
GCACCTGTTGGAACACCCTC+TGG - chr8_1:22252187-22252206 None:intergenic 60.0%
! TGTGGAGTATTCGGTGGGGG+AGG - chr8_1:22252590-22252609 None:intergenic 60.0%
TCCCCCACCGAATACTCCAC+AGG + chr8_1:22252589-22252608 Msa1185270:CDS 60.0%
CTCACACAGTCGAGGCTCTC+TGG - chr8_1:22253934-22253953 None:intergenic 60.0%
TTCCGCCTTAGCGAGGTCCA+GGG + chr8_1:22254231-22254250 Msa1185270:three_prime_UTR 60.0%
TTCCCTGGACCTCGCTAAGG+CGG - chr8_1:22254236-22254255 None:intergenic 60.0%
CTCTTCCCTGGACCTCGCTA+AGG - chr8_1:22254239-22254258 None:intergenic 60.0%
GTGGTTGTCCACGGGAACCG+TGG + chr8_1:22250190-22250209 Msa1185270:CDS 65.0%
AAGTCGTGCCACGGTTCCCG+TGG - chr8_1:22250201-22250220 None:intergenic 65.0%
CTTCCGCCTTAGCGAGGTCC+AGG + chr8_1:22254230-22254249 Msa1185270:three_prime_UTR 65.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 22247150 22254776 22247150 ID=Msa1185270;Name=Msa1185270
chr8_1 mRNA 22247150 22254776 22247150 ID=Msa1185270-mRNA-1;Parent=Msa1185270;Name=Msa1185270-mRNA-1;_AED=0.02;_eAED=0.02;_QI=158|1|1|1|0.9|0.81|11|584|1043
chr8_1 exon 22247150 22248840 22247150 ID=Msa1185270-mRNA-1:exon:8215;Parent=Msa1185270-mRNA-1
chr8_1 exon 22249034 22249150 22249034 ID=Msa1185270-mRNA-1:exon:8216;Parent=Msa1185270-mRNA-1
chr8_1 exon 22249465 22249659 22249465 ID=Msa1185270-mRNA-1:exon:8217;Parent=Msa1185270-mRNA-1
chr8_1 exon 22250180 22250428 22250180 ID=Msa1185270-mRNA-1:exon:8218;Parent=Msa1185270-mRNA-1
chr8_1 exon 22250543 22250611 22250543 ID=Msa1185270-mRNA-1:exon:8219;Parent=Msa1185270-mRNA-1
chr8_1 exon 22250731 22250878 22250731 ID=Msa1185270-mRNA-1:exon:8220;Parent=Msa1185270-mRNA-1
chr8_1 exon 22252086 22252234 22252086 ID=Msa1185270-mRNA-1:exon:8221;Parent=Msa1185270-mRNA-1
chr8_1 exon 22252431 22252610 22252431 ID=Msa1185270-mRNA-1:exon:8222;Parent=Msa1185270-mRNA-1
chr8_1 exon 22252883 22253080 22252883 ID=Msa1185270-mRNA-1:exon:8223;Parent=Msa1185270-mRNA-1
chr8_1 exon 22253865 22254479 22253865 ID=Msa1185270-mRNA-1:exon:8224;Parent=Msa1185270-mRNA-1
chr8_1 exon 22254514 22254776 22254514 ID=Msa1185270-mRNA-1:exon:8225;Parent=Msa1185270-mRNA-1
chr8_1 five_prime_UTR 22247150 22247307 22247150 ID=Msa1185270-mRNA-1:five_prime_utr;Parent=Msa1185270-mRNA-1
chr8_1 CDS 22247308 22248840 22247308 ID=Msa1185270-mRNA-1:cds;Parent=Msa1185270-mRNA-1
chr8_1 CDS 22249034 22249150 22249034 ID=Msa1185270-mRNA-1:cds;Parent=Msa1185270-mRNA-1
chr8_1 CDS 22249465 22249659 22249465 ID=Msa1185270-mRNA-1:cds;Parent=Msa1185270-mRNA-1
chr8_1 CDS 22250180 22250428 22250180 ID=Msa1185270-mRNA-1:cds;Parent=Msa1185270-mRNA-1
chr8_1 CDS 22250543 22250611 22250543 ID=Msa1185270-mRNA-1:cds;Parent=Msa1185270-mRNA-1
chr8_1 CDS 22250731 22250878 22250731 ID=Msa1185270-mRNA-1:cds;Parent=Msa1185270-mRNA-1
chr8_1 CDS 22252086 22252234 22252086 ID=Msa1185270-mRNA-1:cds;Parent=Msa1185270-mRNA-1
chr8_1 CDS 22252431 22252610 22252431 ID=Msa1185270-mRNA-1:cds;Parent=Msa1185270-mRNA-1
chr8_1 CDS 22252883 22253080 22252883 ID=Msa1185270-mRNA-1:cds;Parent=Msa1185270-mRNA-1
chr8_1 CDS 22253865 22254158 22253865 ID=Msa1185270-mRNA-1:cds;Parent=Msa1185270-mRNA-1
chr8_1 three_prime_UTR 22254159 22254479 22254159 ID=Msa1185270-mRNA-1:three_prime_utr;Parent=Msa1185270-mRNA-1
chr8_1 three_prime_UTR 22254514 22254776 22254514 ID=Msa1185270-mRNA-1:three_prime_utr;Parent=Msa1185270-mRNA-1
Gene Sequence

>Msa1185270

ATGGACAATCATGGTTCTGCACCTCCCTATGGATATCCAAACCCTTATGCATATCCTCCATATCCATACCCTCCTCCAAATCCATCTCATGATCCATATGCACCTCCACCAGCATCTTCTCCTTATCCATATGAATCATATCCACCAAATTCTTCACATTCCTTCTACCCTTATCCACCAAAACCTTTAGAGTTTCCTACTTCTCAACCATCTCATGCTTATCCTTACCCTTACCAACAATACCCTCCAATCAATGATGGTTCAAACCCTCCTCATAGTTCTCCTTACCCTCACCAATACCCTCCAATTAGTGATGGTTCAAACCCTCCTTACCCTCACCAATACCCTCCAATTAGTGATGGTTCACATGCTCCTCCTAGTTCTGCTTACCCTCATTTGAATGATCTTATGAGCAATGTTCAGATATCTGATAACAGGCCAAGTGCACCAGTAATGACACATTCCTATTCAGTTTTAAATGAAGAAAAGAAAGAGGAGTTTTATGGTCATTCTAGTAGTAATTCTTTTTCAGGTTATGAACATTCTTACTCTGGTGTGGGGGGTTCACAAAATCTTTCAGCTTATCCCGGTTCAAATGATGACTCGGTGCATAGCCAGAGTTTGCAGATTGTTCCAGCTCAGTATAAAGGGTCATTGAAATATTTGCTCTTGCATGGTAATTTAGATATTTATGTTCATAGTGCTAAGAATCTTCCAAATATGGATATGTTTCATAAGACTTTAGGGGATGTGTTTGGTAAATTTCCTGGTAATGTGAGTAATAAGATTGAGGGAACAGTGACTAGGAAGATCACTAGTGATCCTTATGTGTCCATTTCTTTATTGAATGCTGTAGTTGGTAGGACTTTTGTGATTAGCAATAGCGAAAATCCTGTTTGGGAGCAACACTTTCATGTTCCTGTTGCGCATCATGCTGCTGAAGTGCATTTTGTTGTTAAGGATAGTGATGTGGTAGGTTCACAGCTTATTGGTGTTGTAGCGATTCCGGTCGAACAATTATACTCAGGTGAAAAAGTACAAGGGACTTACCCTATCCTTAATAGCAATGGAAAGCCTTGTAAGCCAGGTGCTGTTTTGAGTGTTACCATTCAGTTCCTACCAATAGAGAAACTGATCATTTATCATCAAGGAGTTGGAGCAGGACCGAACTATATTGGTGTGCCGGGAACATATTTTCCATTGAGGAAAGGTGGAACTGTAACTCTATATCAAGATGCTCATGTTCCAGATGGATGTCTCCCTAATGTCATGCTTGATCATGGGATGCATTATGTTCATGGACAGTGTTGGCGTGATATGGTTGATGCCATACGTCAAGCGAAGCGTTTGGTTTACATTACAGGGTGGTCCGTGTGGCACAAAGTTAGGTTGTTAAGGGACGCTGTTGGACCTGGTAAGGCATCGGATTATACCCTTGGTGAGCTTCTGAGGTCTAAGTCTCAGGAAGGAGTGAGAGTGCTTCTTCTTGTTTGGGATGACCCTACCTCAAGAAGCATTCTTGGTTATAAAACAGATGGTGTCATGGCGACGCATGATGAGGAAACTCGACGATTTTTCAAGCACTCTTCTGTCCAAGTGTTACTTTGTCCTCGCATGGCCGGAAAAAGACATAGCTGGGCTAAGCAACAGGAAGTTGGAACAATATATACACATCATCAGAAGACTGTAATTGTAGATGCTGATGCTGGAAATAACTTCAGAAAAATTGTAGCATTTGTTGGAGGGCTTGATTTGTGTGACGGCCGATATGATACTCCCCACCATCCCCTCTTTAGGACACTGCAGACAGTCCATAAGGATGACTATCACAACCCTACTTTCACGGGTAATACTGGTGGTTGTCCACGGGAACCGTGGCACGACTTGCATTCTAAAATTGACGGTCCAGCAGCTTATGATGTTTTGACAAACTTTGAGGAGCGCTGGTTAAGAGCTGCGAAACCTACAGGGATAAAAAAGTTGAAGAGTTTATATGACGATGCATTGCTCAAGATAGAAAGAATTCCGGATATTCTCCGTGTATCTGATGCTCCTAGTGTTTGTGATGATAATCCTGCAGCTTGGCATGCTCAGATATTTCGATCAATTGATTCAAATTCTGTCAAGGGATTTCCGAAGGAGCCAAGAGATGGATCAATAAAGAACCTTGTATGTGGGAAGAATGTACTGATTGACATGAGCATACACACAGCGTATGTAAAGGCCATTCGTGCTGCACAACATTACATTTATATAGAGAATCAATATTTCATCGGTTCTTCATACAATTGGAGCCAAAATAAGGACATCGGTGCTAATAATTTAATTCCAATGGAAATTGCGCTAAAGATTGCTGAAAAAATAAAGGCAAATGAGAGGTTTGCAGTATACATAGTTATTCCAATGTGGCCAGAGGGTGTTCCAACAGGTGCTGCCACTCAAAGGATTCTATTTTGGCAGAATAAAACAATGCAAATGATGTACGAGACAGTTTACAAGGCATTGGTTGAAGTTGGGCTCGAAGCAGCATTCTCTCCACAAGACTATTTGAACTTTTTCTGTCTTGGAAATCGAGAAACCATAGATATGCATGAGAATATTTCTGTATCTGGAATTCCTCCCCCACCGAATACTCCACAGGCAAATAGTCGAAATAACCGACGGTTCATGATTTACGTTCATTCGAAAGGCATGATAGTTGATGATGAATATGTGATAATTGGATCAGCAAACATCAACCAGCGCTCTATGGAAGGAACAAGGGACACTGAGATTGCAATGGGAGCCTACCAACCTGAATATACATGGGCAAGAAAACATTCTTATCCACGCGGACAGGTTCATGGATATAGGATGTCACTATGGGCAGAACATACAGGCACAATCGAAGACTGTTTCTTACAACCAGAGAGCCTCGACTGTGTGAGAAGGGTTCGAACAATGTCCGAAATGAACTGGAAACAATTTTCATCAAACGATGTGACAGAGATGAGAGGGCATTTACTAAAGTACCCTGTAGAAGTTGATAGAAAAGGTAAGGTTAGACCTCTTCCTGGTCAAGAAGAGTTTCCTGATGTGGGAGGAAAGATAGTAGGATCATTTATTGCCATTCAAGAGAATCTAACCATTTGA
Protein sequence

>Msa1185270

MDNHGSAPPYGYPNPYAYPPYPYPPPNPSHDPYAPPPASSPYPYESYPPNSSHSFYPYPPKPLEFPTSQPSHAYPYPYQQYPPINDGSNPPHSSPYPHQYPPISDGSNPPYPHQYPPISDGSHAPPSSAYPHLNDLMSNVQISDNRPSAPVMTHSYSVLNEEKKEEFYGHSSSNSFSGYEHSYSGVGGSQNLSAYPGSNDDSVHSQSLQIVPAQYKGSLKYLLLHGNLDIYVHSAKNLPNMDMFHKTLGDVFGKFPGNVSNKIEGTVTRKITSDPYVSISLLNAVVGRTFVISNSENPVWEQHFHVPVAHHAAEVHFVVKDSDVVGSQLIGVVAIPVEQLYSGEKVQGTYPILNSNGKPCKPGAVLSVTIQFLPIEKLIIYHQGVGAGPNYIGVPGTYFPLRKGGTVTLYQDAHVPDGCLPNVMLDHGMHYVHGQCWRDMVDAIRQAKRLVYITGWSVWHKVRLLRDAVGPGKASDYTLGELLRSKSQEGVRVLLLVWDDPTSRSILGYKTDGVMATHDEETRRFFKHSSVQVLLCPRMAGKRHSWAKQQEVGTIYTHHQKTVIVDADAGNNFRKIVAFVGGLDLCDGRYDTPHHPLFRTLQTVHKDDYHNPTFTGNTGGCPREPWHDLHSKIDGPAAYDVLTNFEERWLRAAKPTGIKKLKSLYDDALLKIERIPDILRVSDAPSVCDDNPAAWHAQIFRSIDSNSVKGFPKEPRDGSIKNLVCGKNVLIDMSIHTAYVKAIRAAQHYIYIENQYFIGSSYNWSQNKDIGANNLIPMEIALKIAEKIKANERFAVYIVIPMWPEGVPTGAATQRILFWQNKTMQMMYETVYKALVEVGLEAAFSPQDYLNFFCLGNRETIDMHENISVSGIPPPPNTPQANSRNNRRFMIYVHSKGMIVDDEYVIIGSANINQRSMEGTRDTEIAMGAYQPEYTWARKHSYPRGQVHGYRMSLWAEHTGTIEDCFLQPESLDCVRRVRTMSEMNWKQFSSNDVTEMRGHLLKYPVEVDRKGKVRPLPGQEEFPDVGGKIVGSFIAIQENLTI*