AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0254640


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0254640 MtrunA17_Chr2g0315301 56.818 220 15 4 1 220 1 140 1.89e-66 202
Msa0254640 MtrunA17_Chr2g0315291 66.207 145 30 2 100 240 4 133 1.09e-44 146
Msa0254640 MtrunA17_Chr2g0315291 85.106 47 7 0 1 47 1 47 7.04e-20 82.4
Msa0254640 MtrunA17_Chr2g0315321 62.069 145 34 3 100 240 4 131 7.83e-40 134
Msa0254640 MtrunA17_Chr2g0315321 59.184 98 33 2 1 93 1 96 6.69e-22 87.8
Msa0254640 MtrunA17_Chr2g0315331 50.932 161 57 2 100 240 4 162 1.23e-38 132
Msa0254640 MtrunA17_Chr2g0315331 75.410 61 14 1 1 60 1 61 4.32e-21 86.7
Msa0254640 MtrunA17_Chr2g0315311 60.215 93 13 2 1 93 1 69 3.46e-24 93.6
Msa0254640 MtrunA17_Chr2g0315311 54.622 119 41 3 100 209 4 118 1.34e-19 81.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 66 sgRNAs with CRISPR-Local

Find 326 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGTTTAAAGCACATTAATT+AGG 0.248204 2_2:-48194514 Msa0254640:exon
CTACCCGTTGGTTCACCTAT+TGG 0.280966 2_2:+48198956 None:intergenic
CCTCCTCCTGGTCTAACTAT+TGG 0.290049 2_2:+48199016 None:intergenic
GTATTTAATGGACATTGTTT+TGG 0.293668 2_2:-48194467 Msa0254640:three_prime_UTR
GGGTGGGCAGCACTGGCATG+TGG 0.333889 2_2:+48199774 None:intergenic
TAGCACAGGAAGCGAAGGTT+TGG 0.359713 2_2:-48198936 Msa0254640:CDS
GGTGGATTCTTTCGATTACT+TGG 0.383958 2_2:+48194697 None:intergenic
AGCACAGGAAGCGAAGGTTT+GGG 0.387244 2_2:-48198935 Msa0254640:CDS
AGCACAGGCGGAGGAGGATT+GGG 0.392310 2_2:-48194670 Msa0254640:CDS
AGCACAGGAAGCGGAGGATT+GGG 0.405594 2_2:-48194787 Msa0254640:CDS
ACGATCAATCGACGACCAAT+AGG 0.406349 2_2:-48198971 Msa0254640:CDS
TAGCACAGGCGGAGGAGGAT+TGG 0.413090 2_2:-48194671 Msa0254640:CDS
CTCCGCTTCCTGTGCTACCC+GGG 0.415668 2_2:+48194794 None:intergenic
CCTCCTCCGCCTGTGCTACC+TGG 0.415974 2_2:+48194676 None:intergenic
TAGCACAGGAAGCGGAGGAT+TGG 0.426443 2_2:-48194788 Msa0254640:CDS
CCTCCGCTTCCTGTGCTACC+CGG 0.427212 2_2:+48194793 None:intergenic
GGCGGAGGAGGATTGGGAAC+TGG 0.445749 2_2:-48194664 Msa0254640:CDS
TTTCAAATGGCTCTTGCAGC+AGG 0.451956 2_2:-48199806 None:intergenic
AGTTAGACCAGGAGGAGGAC+TGG 0.454564 2_2:-48199011 Msa0254640:CDS
TACCCGTTGGTTCACCATCA+TGG 0.457960 2_2:+48198885 None:intergenic
GGTGGGCAGCACTGGCATGT+GGG 0.476478 2_2:+48199775 None:intergenic
GGGTTGGCAGAACTGGTATG+TGG 0.480519 2_2:+48195265 None:intergenic
CCAGGTAGCACAGGCGGAGG+AGG 0.487226 2_2:-48194676 Msa0254640:CDS
TCCCATGATGGTGAACCAAC+GGG 0.493792 2_2:-48198887 Msa0254640:CDS
TCAGTCCCCAGTCCTCCTCC+TGG 0.494518 2_2:+48199004 None:intergenic
GTTAGACCAGGAGGAGGACT+GGG 0.510990 2_2:-48199010 Msa0254640:CDS
GGTTGGCAGAACTGGTATGT+GGG 0.514276 2_2:+48195266 None:intergenic
TCCGCTTCCTGTGCTACCCG+GGG 0.514938 2_2:+48194795 None:intergenic
GGAAGCGGAGGATTGGGAAC+TGG 0.515122 2_2:-48194781 Msa0254640:CDS
ACCCGTTGGTTCACCATCAT+GGG 0.515508 2_2:+48198886 None:intergenic
TCGCTTCCTGTGCTACCCGT+TGG 0.522959 2_2:+48198872 None:intergenic
TCGCTTCCTGTGCTACCCGT+TGG 0.522959 2_2:+48198944 None:intergenic
ATTGGGAACTGGTCCGAAAA+CGG 0.529672 2_2:-48194770 Msa0254640:CDS
GGTGAACCAACGGGTAGCAC+AGG 0.538871 2_2:-48198878 Msa0254640:CDS
TCGACGATCAATTCCCATGA+TGG 0.542767 2_2:-48198899 Msa0254640:CDS
TGCACAAACAACTAGTACTC+AGG 0.551675 2_2:-48194641 Msa0254640:CDS
GGTGAACCAACGGGTAGCAC+AGG 0.559451 2_2:-48198950 Msa0254640:CDS
TTCCCATGATGGTGAACCAA+CGG 0.567661 2_2:-48198888 Msa0254640:CDS
CGACCAATAGGTGAACCAAC+GGG 0.569925 2_2:-48198959 Msa0254640:CDS
AAGAATCCACCAGGTAGCAC+AGG 0.570025 2_2:-48194685 Msa0254640:CDS
CGTCGATTGATCGTCGATTG+CGG 0.572151 2_2:+48198980 None:intergenic
TCAATCTTACTGCCAATGAG+TGG 0.586404 2_2:-48194579 Msa0254640:CDS
TGGGAATTGATCGTCGATTG+CGG 0.587889 2_2:+48198905 None:intergenic
AACAACTAGTACTCAGGTGG+AGG 0.594211 2_2:-48194635 Msa0254640:CDS
CCTCCGCCTGTGCTACCTGG+TGG 0.595864 2_2:+48194679 None:intergenic
CCACCAGGTAGCACAGGCGG+AGG 0.597247 2_2:-48194679 Msa0254640:CDS
CCGGGTAGCACAGGAAGCGG+AGG 0.602411 2_2:-48194793 Msa0254640:CDS
AGTTGATCGAAAGAAACCCC+CGG 0.606931 2_2:-48194812 Msa0254640:CDS
GCACAGGAAGCGAAGGTTTG+GGG 0.608095 2_2:-48198934 Msa0254640:CDS
CAATCTTACTGCCAATGAGT+GGG 0.616463 2_2:-48194578 Msa0254640:CDS
GAGAATACTCAGCGACGTGG+AGG 0.622518 2_2:-48194748 Msa0254640:CDS
ACGGGTAGCACAGGAAGCGA+AGG 0.625584 2_2:-48198869 Msa0254640:intron
ACGGGTAGCACAGGAAGCGA+AGG 0.625584 2_2:-48198941 Msa0254640:CDS
AATCCACCAGGTAGCACAGG+CGG 0.634430 2_2:-48194682 Msa0254640:CDS
CAATGTCGAACCTACAAAGA+GGG 0.635757 2_2:+48194534 None:intergenic
ACAATGTCGAACCTACAAAG+AGG 0.639877 2_2:+48194533 None:intergenic
AGTAATCGAAAGAATCCACC+AGG 0.647364 2_2:-48194694 Msa0254640:CDS
CCGCTTCCTGTGCTACCCGG+GGG 0.651421 2_2:+48194796 None:intergenic
ACGACCAATAGGTGAACCAA+CGG 0.653566 2_2:-48198960 Msa0254640:CDS
ATGAAACCAATAGTTAGACC+AGG 0.663167 2_2:-48199022 Msa0254640:CDS
CCAATAGTTAGACCAGGAGG+AGG 0.665223 2_2:-48199016 Msa0254640:CDS
AAACCAATAGTTAGACCAGG+AGG 0.695638 2_2:-48199019 Msa0254640:CDS
TCTTACTGCCAATGAGTGGG+TGG 0.702286 2_2:-48194575 Msa0254640:CDS
ACGGAGAATACTCAGCGACG+TGG 0.705185 2_2:-48194751 Msa0254640:CDS
ACAAACAACTAGTACTCAGG+TGG 0.706249 2_2:-48194638 Msa0254640:CDS
TTAGACCAGGAGGAGGACTG+GGG 0.706727 2_2:-48199009 Msa0254640:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTAATTAAGAAACTAATTT+GGG - chr2_2:48195050-48195069 Msa0254640:intron 10.0%
!!! TATAAATGTTTTATATTTAG+AGG + chr2_2:48198048-48198067 None:intergenic 10.0%
!!! ATAATTTGTATTATTTCAAA+TGG - chr2_2:48198905-48198924 Msa0254640:CDS 10.0%
!!! AATTAGTTTCTTAATTAAAC+TGG + chr2_2:48195049-48195068 None:intergenic 15.0%
!! GTTTAATTAAGAAACTAATT+TGG - chr2_2:48195049-48195068 Msa0254640:intron 15.0%
!! AAAACAAAATTTCTTATTGT+AGG - chr2_2:48195601-48195620 Msa0254640:intron 15.0%
!!! TATATATGTTAGTTTTTCAT+AGG + chr2_2:48196018-48196037 None:intergenic 15.0%
!! ATACATTAGAATATAACTAA+CGG - chr2_2:48196035-48196054 Msa0254640:intron 15.0%
!!! TAATTTTGTCATGAAATTAA+TGG - chr2_2:48196399-48196418 Msa0254640:intron 15.0%
!!! AGAATTAATTGATATTGTTT+TGG - chr2_2:48196513-48196532 Msa0254640:intron 15.0%
!! TATAAATAATCTTGTGATTA+GGG + chr2_2:48198009-48198028 None:intergenic 15.0%
!! TTATAAATAATCTTGTGATT+AGG + chr2_2:48198010-48198029 None:intergenic 15.0%
!! TTATATATACAAAGAGATAT+CGG - chr2_2:48198437-48198456 Msa0254640:intron 15.0%
!!! TACTGATTTATAAAATCTAT+AGG + chr2_2:48199255-48199274 None:intergenic 15.0%
!!! TAGATTTTATAAATCAGTAT+AGG - chr2_2:48199256-48199275 Msa0254640:intron 15.0%
!!! AGATTTTATAAATCAGTATA+GGG - chr2_2:48199257-48199276 Msa0254640:intron 15.0%
!! AACTTATAATAAACTATCAT+TGG - chr2_2:48199298-48199317 Msa0254640:intron 15.0%
!!! TAATTTTCTCATGTATTTAA+TGG - chr2_2:48199736-48199755 Msa0254640:intron 15.0%
!! ATATATACAGTATACTTACA+TGG + chr2_2:48194500-48194519 None:intergenic 20.0%
!! GTCTTTAAACATCTTATATA+AGG + chr2_2:48194579-48194598 None:intergenic 20.0%
!!! TGTTTAAAGACATTTTCTTT+TGG - chr2_2:48194588-48194607 Msa0254640:CDS 20.0%
!! TTGACTAAATTCAATTCTTA+AGG - chr2_2:48194623-48194642 Msa0254640:CDS 20.0%
!!! AAATGATAACAAGTGTTTTT+AGG - chr2_2:48195494-48195513 Msa0254640:intron 20.0%
!!! AATGATAACAAGTGTTTTTA+GGG - chr2_2:48195495-48195514 Msa0254640:intron 20.0%
!!! ACAAGATTGTTAGTTTTAAA+AGG - chr2_2:48195677-48195696 Msa0254640:intron 20.0%
!! AATATTGCACAATATATCAT+AGG + chr2_2:48195728-48195747 None:intergenic 20.0%
!!! TTTTAATATGAACAAGATGA+AGG - chr2_2:48195786-48195805 Msa0254640:intron 20.0%
!!! TTAGTTTTTCATAGGAAAAA+AGG + chr2_2:48196010-48196029 None:intergenic 20.0%
!!! TATATATAGTTTAGGATTGT+TGG + chr2_2:48196068-48196087 None:intergenic 20.0%
!! CTATCGAATATATATAGTTT+AGG + chr2_2:48196076-48196095 None:intergenic 20.0%
!! AAAAAGTTCTTCAAATACAA+GGG + chr2_2:48196227-48196246 None:intergenic 20.0%
!! AAATGAACACTTAAAAATAC+AGG - chr2_2:48196272-48196291 Msa0254640:intron 20.0%
!!! GAAATTAATGGATATTGTTT+TGG - chr2_2:48196411-48196430 Msa0254640:intron 20.0%
!!! TTTTTACATTGAAATGAGAA+TGG - chr2_2:48196538-48196557 Msa0254640:intron 20.0%
!!! ATCTGGTTTGTATAATTTTT+AGG + chr2_2:48196693-48196712 None:intergenic 20.0%
!! CATTAAACAACCAATAAAAT+CGG + chr2_2:48196881-48196900 None:intergenic 20.0%
!!! AGAAAATAATGGAAATTCTT+TGG - chr2_2:48197849-48197868 Msa0254640:intron 20.0%
!! TATTAGAAATAAACATGTTG+TGG + chr2_2:48197920-48197939 None:intergenic 20.0%
!! ATAAATAATCTTGTGATTAG+GGG + chr2_2:48198008-48198027 None:intergenic 20.0%
!! CAATCATCAAACAAAAATTA+CGG + chr2_2:48198394-48198413 None:intergenic 20.0%
!! TTCATACAAATTAAACAACT+TGG + chr2_2:48198531-48198550 None:intergenic 20.0%
!! AGAAAATCTTTGACTAATTA+AGG + chr2_2:48198622-48198641 None:intergenic 20.0%
!!! GTAATTGTCATAGATTTTTT+AGG + chr2_2:48194478-48194497 None:intergenic 20.0%
!!! GTAAATTTTTAACTTGTTCA+GGG + chr2_2:48199201-48199220 None:intergenic 20.0%
!!! AGTAAATTTTTAACTTGTTC+AGG + chr2_2:48199202-48199221 None:intergenic 20.0%
!!! TTGTTTAAAGCACATTAATT+AGG - chr2_2:48196364-48196383 Msa0254640:intron 20.0%
!!! ATTTTTTAGACGCATATTTG+GGG + chr2_2:48194465-48194484 None:intergenic 25.0%
!!! GATTTTTTAGACGCATATTT+GGG + chr2_2:48194466-48194485 None:intergenic 25.0%
!!! AGATTTTTTAGACGCATATT+TGG + chr2_2:48194467-48194486 None:intergenic 25.0%
!!! TCATCATCATCAGAATTTTT+TGG + chr2_2:48195403-48195422 None:intergenic 25.0%
! TTAGTCGAATTAAAAAGACT+TGG - chr2_2:48196164-48196183 Msa0254640:intron 25.0%
! GAAAAAGTTCTTCAAATACA+AGG + chr2_2:48196228-48196247 None:intergenic 25.0%
!!! TGCTACTAGTTGTTTTATTT+TGG - chr2_2:48196579-48196598 Msa0254640:intron 25.0%
! AAAAGCTGAACATATATCAA+AGG - chr2_2:48196846-48196865 Msa0254640:intron 25.0%
! TGGTTGTTTAATGTATGATA+TGG - chr2_2:48196888-48196907 Msa0254640:intron 25.0%
!! TTTTCTTCATCCAATATTCT+TGG - chr2_2:48197193-48197212 Msa0254640:intron 25.0%
! TTTCTTCATCCAATATTCTT+GGG - chr2_2:48197194-48197213 Msa0254640:intron 25.0%
!! ATTTTCTTTCATGTTAGCTA+GGG + chr2_2:48197836-48197855 None:intergenic 25.0%
!! TATTTTCTTTCATGTTAGCT+AGG + chr2_2:48197837-48197856 None:intergenic 25.0%
! GCTAACATGAAAGAAAATAA+TGG - chr2_2:48197838-48197857 Msa0254640:intron 25.0%
!! AAATAATGGAAATTCTTTGG+CGG - chr2_2:48197852-48197871 Msa0254640:intron 25.0%
!! TTTTTGCTTATATTTGTGAC+CGG + chr2_2:48198203-48198222 None:intergenic 25.0%
! CATTCAATAAATGATGTATG+TGG + chr2_2:48198277-48198296 None:intergenic 25.0%
! TTTGCTTATATATTTGTGAC+CGG - chr2_2:48198314-48198333 Msa0254640:intron 25.0%
! TTCTTTGTGCATGATTATTT+GGG - chr2_2:48198862-48198881 Msa0254640:intron 25.0%
! GTTCTCTAATTATATGCTTA+AGG - chr2_2:48199037-48199056 Msa0254640:CDS 25.0%
!!! TTTTAATTAGCCATGATTCA+TGG - chr2_2:48199152-48199171 Msa0254640:intron 25.0%
!!! AGTATAGGGAATTTTTTGTA+TGG - chr2_2:48199271-48199290 Msa0254640:intron 25.0%
!!! TGTTTTGTTTTTCTTGTTGT+TGG + chr2_2:48199381-48199400 None:intergenic 25.0%
!!! GTATTTAATGGACATTGTTT+TGG - chr2_2:48199748-48199767 Msa0254640:CDS 25.0%
!!! ATTGTTTTGGCATTTTATGT+TGG - chr2_2:48199761-48199780 Msa0254640:CDS 25.0%
!!! TTGTTTTGGCATTTTATGTT+GGG - chr2_2:48199762-48199781 Msa0254640:CDS 25.0%
!!! TTTTTTAGACGCATATTTGG+GGG + chr2_2:48194464-48194483 None:intergenic 30.0%
ATTCTTAAGGTGAATAAGTG+AGG - chr2_2:48194636-48194655 Msa0254640:CDS 30.0%
!! TGTTAATTTGTAGTCGACTT+AGG - chr2_2:48194886-48194905 Msa0254640:intron 30.0%
!! GTTAATTTGTAGTCGACTTA+GGG - chr2_2:48194887-48194906 Msa0254640:intron 30.0%
!! TTAATTTGTAGTCGACTTAG+GGG - chr2_2:48194888-48194907 Msa0254640:intron 30.0%
TTAAAAATTTGTAGTCGACC+AGG - chr2_2:48194943-48194962 Msa0254640:intron 30.0%
!!! TCATCATCAGAATTTTTTGG+TGG + chr2_2:48195400-48195419 None:intergenic 30.0%
! ACTTTTGCATTCAATCTTAC+TGG - chr2_2:48195440-48195459 Msa0254640:intron 30.0%
TACAATAAGGACGTTGTTTA+AGG + chr2_2:48195629-48195648 None:intergenic 30.0%
TTAAACAACGTCCTTATTGT+AGG - chr2_2:48195628-48195647 Msa0254640:intron 30.0%
!!! AGTTTTAAAAGGTTACTTGC+AGG - chr2_2:48195688-48195707 Msa0254640:intron 30.0%
CATGACTTTAACGATAAAGA+TGG - chr2_2:48195861-48195880 Msa0254640:intron 30.0%
TTTAAGTGTTCATTTACGAC+AGG + chr2_2:48196267-48196286 None:intergenic 30.0%
! AACTGAAGTGTCAAAATGAT+TGG - chr2_2:48196485-48196504 Msa0254640:intron 30.0%
!! TTTTGGTGATACTTCGTTTA+AGG + chr2_2:48196624-48196643 None:intergenic 30.0%
AGTATCACCAAAAAGATTAC+CGG - chr2_2:48196631-48196650 Msa0254640:intron 30.0%
!! TGTCATTGTAGTTGATAATC+TGG + chr2_2:48196710-48196729 None:intergenic 30.0%
!!! TCAGCTTTTACATTAGTCTT+TGG + chr2_2:48196835-48196854 None:intergenic 30.0%
!!! GTTCCTTATACCGATTTTAT+TGG - chr2_2:48196868-48196887 Msa0254640:intron 30.0%
CAACCAATAAAATCGGTATA+AGG + chr2_2:48196874-48196893 None:intergenic 30.0%
!! TCTCATATTGATTTGTGAGA+AGG - chr2_2:48197012-48197031 Msa0254640:intron 30.0%
!! TATTGATTTGTGAGAAGGAA+AGG - chr2_2:48197017-48197036 Msa0254640:intron 30.0%
TTCTTCATCCAATATTCTTG+GGG - chr2_2:48197195-48197214 Msa0254640:intron 30.0%
CAAGTTCAGACACATAATAT+TGG + chr2_2:48197238-48197257 None:intergenic 30.0%
TATATTGAGATTCTATCGCT+GGG + chr2_2:48197285-48197304 None:intergenic 30.0%
!!! TATGAGGAAATTTTGGCTAT+TGG + chr2_2:48197329-48197348 None:intergenic 30.0%
! TGAATTCAAGTTCAACATTG+TGG + chr2_2:48197356-48197375 None:intergenic 30.0%
TCAAAATAACCCATTTCCAA+AGG - chr2_2:48197373-48197392 Msa0254640:intron 30.0%
! ACTGTTATTCCTTTGGAAAT+GGG + chr2_2:48197385-48197404 None:intergenic 30.0%
! GTCATTCAACCTAATTTTGA+GGG - chr2_2:48197429-48197448 Msa0254640:intron 30.0%
GATTACAAGTGTAATCTTCA+TGG + chr2_2:48197498-48197517 None:intergenic 30.0%
AAGATTTCATAGGATGAGTA+TGG + chr2_2:48197534-48197553 None:intergenic 30.0%
AGTGAATGTGAAGATTTCAT+AGG + chr2_2:48197544-48197563 None:intergenic 30.0%
AAGGGGATTCAATGATTATT+GGG + chr2_2:48197572-48197591 None:intergenic 30.0%
AAAGGGGATTCAATGATTAT+TGG + chr2_2:48197573-48197592 None:intergenic 30.0%
TCATGTAAACTCTGTACAAA+GGG + chr2_2:48197590-48197609 None:intergenic 30.0%
ATCATGTAAACTCTGTACAA+AGG + chr2_2:48197591-48197610 None:intergenic 30.0%
! AATAGTGATGAAGTGTCATA+TGG - chr2_2:48197651-48197670 Msa0254640:intron 30.0%
!!! TTGTTTTTTCGTCGTTACTT+TGG + chr2_2:48197692-48197711 None:intergenic 30.0%
ATAGAGAGAATAGAGAATTC+TGG - chr2_2:48197782-48197801 Msa0254640:intron 30.0%
GAAATAAACATGTTGTGGAA+TGG + chr2_2:48197915-48197934 None:intergenic 30.0%
TGTCAACTTTGAACACTTAA+TGG + chr2_2:48198669-48198688 None:intergenic 30.0%
TAGTTGAATCACTTGAATGT+TGG + chr2_2:48198788-48198807 None:intergenic 30.0%
TTGAACAAACACACTAACTT+TGG - chr2_2:48198823-48198842 Msa0254640:intron 30.0%
CTTCTTTGTGCATGATTATT+TGG - chr2_2:48198861-48198880 Msa0254640:intron 30.0%
TCTTTGTGCATGATTATTTG+GGG - chr2_2:48198863-48198882 Msa0254640:intron 30.0%
!!! ATTTTTTAGGCACATAGTTG+GGG + chr2_2:48198974-48198993 None:intergenic 30.0%
!!! GATTTTTTAGGCACATAGTT+GGG + chr2_2:48198975-48198994 None:intergenic 30.0%
!!! AGATTTTTTAGGCACATAGT+TGG + chr2_2:48198976-48198995 None:intergenic 30.0%
GTTAATCAAACCATGAATCA+TGG + chr2_2:48199165-48199184 None:intergenic 30.0%
AAAACCACCAAAAAATTCTG+AGG - chr2_2:48199493-48199512 Msa0254640:intron 30.0%
!!! TGTTTTGGCATTTTATGTTG+GGG - chr2_2:48199763-48199782 Msa0254640:CDS 30.0%
GTGAATAAGTGAGGAATCTA+AGG - chr2_2:48194645-48194664 Msa0254640:CDS 35.0%
TATGAAAACGTAGAACCATC+TGG + chr2_2:48194818-48194837 None:intergenic 35.0%
ATGAAACCAATAGTTAGACC+AGG - chr2_2:48195193-48195212 Msa0254640:intron 35.0%
GTAAACAGGAACCTACAATA+AGG + chr2_2:48195642-48195661 None:intergenic 35.0%
! TTATTCTTTTCTCTCTACGC+TGG - chr2_2:48195939-48195958 Msa0254640:intron 35.0%
CTGAAGAGGCAATATATCAA+AGG + chr2_2:48196128-48196147 None:intergenic 35.0%
CGAAGAGGATAACAAAAGAA+TGG + chr2_2:48196333-48196352 None:intergenic 35.0%
!! TCTTTTGTTATCCTCTTCGT+AGG - chr2_2:48196334-48196353 Msa0254640:intron 35.0%
!!! TGTTTTGGCGTTCTTATTGT+TGG - chr2_2:48196426-48196445 Msa0254640:intron 35.0%
!! GTTTTGGCGTTCTTATTGTT+GGG - chr2_2:48196427-48196446 Msa0254640:intron 35.0%
ACGATTCTTTAAGCTCTCAT+TGG - chr2_2:48196801-48196820 Msa0254640:intron 35.0%
! CTTATAGCTTGTGCTAGATA+TGG + chr2_2:48196925-48196944 None:intergenic 35.0%
GCAAAATGCTAGGTTAAACT+TGG + chr2_2:48196968-48196987 None:intergenic 35.0%
! ATTTTGCAGTGAGCACAATA+AGG - chr2_2:48196981-48197000 Msa0254640:intron 35.0%
TCTATGCTAGTTGAAAGAGA+GGG + chr2_2:48197048-48197067 None:intergenic 35.0%
!! ATTGTATGCAAGAGTTTTGG+TGG + chr2_2:48197100-48197119 None:intergenic 35.0%
! TGGATTGTATGCAAGAGTTT+TGG + chr2_2:48197103-48197122 None:intergenic 35.0%
AGCTTCATCAATGGTAACAT+CGG - chr2_2:48197140-48197159 Msa0254640:intron 35.0%
!! TATCACATCACCTTTGGAAT+TGG + chr2_2:48197168-48197187 None:intergenic 35.0%
TTCCAAAGGTGATGTGATAA+AGG - chr2_2:48197169-48197188 Msa0254640:intron 35.0%
AACCTTTATCACATCACCTT+TGG + chr2_2:48197174-48197193 None:intergenic 35.0%
TATGTGTCTGAACTTGATGT+TGG - chr2_2:48197242-48197261 Msa0254640:intron 35.0%
ATGTGTCTGAACTTGATGTT+GGG - chr2_2:48197243-48197262 Msa0254640:intron 35.0%
GTATATTGAGATTCTATCGC+TGG + chr2_2:48197286-48197305 None:intergenic 35.0%
CGATAGAATCTCAATATACG+AGG - chr2_2:48197287-48197306 Msa0254640:intron 35.0%
! TGGAGGATATGAGGAAATTT+TGG + chr2_2:48197336-48197355 None:intergenic 35.0%
! ATTCAAGTTCAACATTGTGG+AGG + chr2_2:48197353-48197372 None:intergenic 35.0%
! GACTGTTATTCCTTTGGAAA+TGG + chr2_2:48197386-48197405 None:intergenic 35.0%
TTTCCAAAGGAATAACAGTC+TGG - chr2_2:48197386-48197405 Msa0254640:intron 35.0%
! GGTCATTCAACCTAATTTTG+AGG - chr2_2:48197428-48197447 Msa0254640:intron 35.0%
CAACTAAAGCCCTCAAAATT+AGG + chr2_2:48197441-48197460 None:intergenic 35.0%
! TTGAGGGCTTTAGTTGTTAA+TGG - chr2_2:48197445-48197464 Msa0254640:intron 35.0%
ACAAGTGTAATCTTCATGGT+AGG + chr2_2:48197494-48197513 None:intergenic 35.0%
CATAGGATGAGTATGGATTT+GGG + chr2_2:48197527-48197546 None:intergenic 35.0%
TCATAGGATGAGTATGGATT+TGG + chr2_2:48197528-48197547 None:intergenic 35.0%
AGGGGATTCAATGATTATTG+GGG + chr2_2:48197571-48197590 None:intergenic 35.0%
CATGTAAACTCTGTACAAAG+GGG + chr2_2:48197589-48197608 None:intergenic 35.0%
TAAGAATAATTGTCTTCGCC+TGG + chr2_2:48197629-48197648 None:intergenic 35.0%
GTAACGACGAAAAAACAATG+AGG - chr2_2:48197694-48197713 Msa0254640:intron 35.0%
GAAAAAACAATGAGGAAACG+AGG - chr2_2:48197702-48197721 Msa0254640:intron 35.0%
TTTCATGTTAGCTAGGGATT+AGG + chr2_2:48197830-48197849 None:intergenic 35.0%
CTACTCCATCTGTCAATTTA+TGG - chr2_2:48197886-48197905 Msa0254640:intron 35.0%
GGAATCCATAAATTGACAGA+TGG + chr2_2:48197894-48197913 None:intergenic 35.0%
AATAATCTTGTGATTAGGGG+CGG + chr2_2:48198005-48198024 None:intergenic 35.0%
! TTGATAATAGTTACACCCTC+CGG - chr2_2:48198181-48198200 Msa0254640:intron 35.0%
CTTATATATTTGTGACCGGA+GGG - chr2_2:48198318-48198337 Msa0254640:intron 35.0%
GATGATTGCATTGAAAACGA+CGG - chr2_2:48198406-48198425 Msa0254640:intron 35.0%
TTTGTTCAATTGTGTCTTGG+TGG + chr2_2:48198812-48198831 None:intergenic 35.0%
GTGTTTGTTCAATTGTGTCT+TGG + chr2_2:48198815-48198834 None:intergenic 35.0%
!!! TTTTTTAGGCACATAGTTGG+GGG + chr2_2:48198973-48198992 None:intergenic 35.0%
!!! CTTTTTTTGACCCTCTTTGT+AGG - chr2_2:48199671-48199690 Msa0254640:intron 35.0%
AAGGTTCAAACTTCGATCCT+TGG - chr2_2:48194664-48194683 Msa0254640:CDS 40.0%
CCAACTGATCTATGTTCACA+GGG - chr2_2:48194704-48194723 Msa0254640:CDS 40.0%
!! ACCGAAAAGATTACCGACTT+CGG - chr2_2:48194786-48194805 Msa0254640:CDS 40.0%
! ACCGAAGTCGGTAATCTTTT+CGG + chr2_2:48194790-48194809 None:intergenic 40.0%
! TCTCTTGTTTAGCACTACAC+CGG + chr2_2:48194914-48194933 None:intergenic 40.0%
!! CTAATGTGTAGTTTGCTACC+TGG + chr2_2:48194964-48194983 None:intergenic 40.0%
AAACCAATAGTTAGACCAGG+AGG - chr2_2:48195196-48195215 Msa0254640:intron 40.0%
!! TTTGGTGGATTCTCCATTTG+CGG + chr2_2:48195385-48195404 None:intergenic 40.0%
! TTCCTGTTTACGCGTGTTTT+TGG - chr2_2:48195651-48195670 Msa0254640:intron 40.0%
TACCAAAAACACGCGTAAAC+AGG + chr2_2:48195656-48195675 None:intergenic 40.0%
AGGCAATATATCAAAGGTCC+AGG + chr2_2:48196122-48196141 None:intergenic 40.0%
GATATATTGCCTCTTCAGAG+AGG - chr2_2:48196130-48196149 Msa0254640:intron 40.0%
! CATTCAAATCCTCTCTGAAG+AGG + chr2_2:48196142-48196161 None:intergenic 40.0%
GTGTTCATTTACGACAGGTA+AGG + chr2_2:48196262-48196281 None:intergenic 40.0%
! CATGAAGCCGGTAATCTTTT+TGG + chr2_2:48196641-48196660 None:intergenic 40.0%
GTCTATGCTAGTTGAAAGAG+AGG + chr2_2:48197049-48197068 None:intergenic 40.0%
TTGATGAAGCTACACAAGCT+AGG + chr2_2:48197131-48197150 None:intergenic 40.0%
AGCTTGTGTAGCTTCATCAA+TGG - chr2_2:48197131-48197150 Msa0254640:intron 40.0%
!! AACATCGGTTCCAATTCCAA+AGG - chr2_2:48197155-48197174 Msa0254640:intron 40.0%
TGTGTCTGAACTTGATGTTG+GGG - chr2_2:48197244-48197263 Msa0254640:intron 40.0%
!!! GGAAATTTTGGCTATTGGAG+TGG + chr2_2:48197324-48197343 None:intergenic 40.0%
TCAACATTGTGGAGGATATG+AGG + chr2_2:48197345-48197364 None:intergenic 40.0%
GAACCAGACTGTTATTCCTT+TGG + chr2_2:48197392-48197411 None:intergenic 40.0%
!! GAATAACAGTCTGGTTCTTC+AGG - chr2_2:48197395-48197414 Msa0254640:intron 40.0%
!!! CGTCGTTACTTTGGCTTTTA+TGG + chr2_2:48197683-48197702 None:intergenic 40.0%
TCGTAGAGTGTAACAGTCAT+CGG - chr2_2:48197747-48197766 Msa0254640:intron 40.0%
TGCTTATATTTGTGACCGGA+GGG + chr2_2:48198199-48198218 None:intergenic 40.0%
TTGCTTATATTTGTGACCGG+AGG + chr2_2:48198200-48198219 None:intergenic 40.0%
GCTTATATATTTGTGACCGG+AGG - chr2_2:48198317-48198336 Msa0254640:intron 40.0%
ACCAATATTTGTACACCCTC+CGG + chr2_2:48198336-48198355 None:intergenic 40.0%
ATTGCATTGAAAACGACGGA+GGG - chr2_2:48198410-48198429 Msa0254640:intron 40.0%
TGACTAATTAAGGTTGCAGC+AGG + chr2_2:48198612-48198631 None:intergenic 40.0%
TCTTCCTCAGTCAAGAACAT+AGG - chr2_2:48198639-48198658 Msa0254640:intron 40.0%
!!! CTTGGTGCCTCAGAATTTTT+TGG + chr2_2:48199503-48199522 None:intergenic 40.0%
! GGTGGATTCTTTCGATTACT+TGG + chr2_2:48199521-48199540 None:intergenic 40.0%
AGTAATCGAAAGAATCCACC+AGG - chr2_2:48199521-48199540 Msa0254640:intron 40.0%
TGCACAAACAACTAGTACTC+AGG - chr2_2:48199574-48199593 Msa0254640:intron 40.0%
ACAAACAACTAGTACTCAGG+TGG - chr2_2:48199577-48199596 Msa0254640:intron 40.0%
TCAATCTTACTGCCAATGAG+TGG - chr2_2:48199636-48199655 Msa0254640:intron 40.0%
CAATCTTACTGCCAATGAGT+GGG - chr2_2:48199637-48199656 Msa0254640:intron 40.0%
AAAAATCACCACCCACTCAT+TGG + chr2_2:48199651-48199670 None:intergenic 40.0%
CAATGTCGAACCTACAAAGA+GGG + chr2_2:48199684-48199703 None:intergenic 40.0%
ACAATGTCGAACCTACAAAG+AGG + chr2_2:48199685-48199704 None:intergenic 40.0%
TTAGACGCATATTTGGGGGT+GGG + chr2_2:48194460-48194479 None:intergenic 45.0%
TTTAGACGCATATTTGGGGG+TGG + chr2_2:48194461-48194480 None:intergenic 45.0%
!! CAGAGGCATTTCAGTATCCA+AGG + chr2_2:48194684-48194703 None:intergenic 45.0%
GAACATAGATCAGTTGGCAG+AGG + chr2_2:48194701-48194720 None:intergenic 45.0%
GCCAACTGATCTATGTTCAC+AGG - chr2_2:48194703-48194722 Msa0254640:CDS 45.0%
CCCTGTGAACATAGATCAGT+TGG + chr2_2:48194707-48194726 None:intergenic 45.0%
! GAAGTCGGTAATCTTTTCGG+TGG + chr2_2:48194787-48194806 None:intergenic 45.0%
ACGATCAATCGACGACCAAT+AGG - chr2_2:48195244-48195263 Msa0254640:CDS 45.0%
ACGACCAATAGGTGAACCAA+CGG - chr2_2:48195255-48195274 Msa0254640:CDS 45.0%
! TGGGAATTGATCGTCGATTG+CGG + chr2_2:48195313-48195332 None:intergenic 45.0%
TCGACGATCAATTCCCATGA+TGG - chr2_2:48195316-48195335 Msa0254640:intron 45.0%
! TTCCCATGATGGTGAACCAA+CGG - chr2_2:48195327-48195346 Msa0254640:intron 45.0%
TCTTACTGGCAATGAGTGAG+TGG - chr2_2:48195454-48195473 Msa0254640:intron 45.0%
ACAATGTCGAACCTACGAAG+AGG + chr2_2:48196348-48196367 None:intergenic 45.0%
!! AAGATTACCGGCTTCATGAC+CGG - chr2_2:48196643-48196662 Msa0254640:intron 45.0%
TCGCGAAATGTAGAACCAAC+CGG + chr2_2:48196665-48196684 None:intergenic 45.0%
TGTGCTCACTGCAAAATGCT+AGG + chr2_2:48196978-48196997 None:intergenic 45.0%
!! TGCAAGAGTTTTGGTGGATG+TGG + chr2_2:48197094-48197113 None:intergenic 45.0%
GCTACACAAGCTAGGATCTT+TGG + chr2_2:48197123-48197142 None:intergenic 45.0%
TGCACATGCCCCAAGAATAT+TGG + chr2_2:48197206-48197225 None:intergenic 45.0%
GTGTCTGAACTTGATGTTGG+GGG - chr2_2:48197245-48197264 Msa0254640:intron 45.0%
GTAGGTTAACTCTGCACAAG+GGG + chr2_2:48197476-48197495 None:intergenic 45.0%
GGTAGGTTAACTCTGCACAA+GGG + chr2_2:48197477-48197496 None:intergenic 45.0%
TGGTAGGTTAACTCTGCACA+AGG + chr2_2:48197478-48197497 None:intergenic 45.0%
ATAATTGTCTTCGCCTGGCA+CGG + chr2_2:48197624-48197643 None:intergenic 45.0%
AAACGAGGAAGAATCCTCAC+CGG - chr2_2:48197717-48197736 Msa0254640:intron 45.0%
GACTGTTACACTCTACGACT+AGG + chr2_2:48197745-48197764 None:intergenic 45.0%
TAGCTAGGGATTAGGATGCA+AGG + chr2_2:48197822-48197841 None:intergenic 45.0%
GGAAATTCTTTGGCGGTTCT+TGG - chr2_2:48197859-48197878 Msa0254640:intron 45.0%
! ACCGGAGGGTGTACAAATAT+TGG - chr2_2:48198332-48198351 Msa0254640:intron 45.0%
GATTGCATTGAAAACGACGG+AGG - chr2_2:48198409-48198428 Msa0254640:intron 45.0%
TCAGCCTATGTTCTTGACTG+AGG + chr2_2:48198646-48198665 None:intergenic 45.0%
TTTCAAATGGCTCTTGCTGC+AGG - chr2_2:48198918-48198937 Msa0254640:CDS 45.0%
AGTTGATCGAAAGAAACCCC+CGG - chr2_2:48199403-48199422 Msa0254640:intron 45.0%
ATTGGGAACTGGTCCGAAAA+CGG - chr2_2:48199445-48199464 Msa0254640:intron 45.0%
! CGCTGAGTATTCTCCGTTTT+CGG + chr2_2:48199461-48199480 None:intergenic 45.0%
!!! GGTGCCTCAGAATTTTTTGG+TGG + chr2_2:48199500-48199519 None:intergenic 45.0%
AACAACTAGTACTCAGGTGG+AGG - chr2_2:48199580-48199599 Msa0254640:intron 45.0%
!!! AAAAATAGTAATTTTTATAT+TGG - chr2_2:48195533-48195552 Msa0254640:intron 5.0%
! TTTGTAGTCGACTTAGGGGC+CGG - chr2_2:48194892-48194911 Msa0254640:intron 50.0%
CCTCCTCCTGGTCTAACTAT+TGG + chr2_2:48195202-48195221 None:intergenic 50.0%
CCAATAGTTAGACCAGGAGG+AGG - chr2_2:48195199-48195218 Msa0254640:intron 50.0%
! CGTCGATTGATCGTCGATTG+CGG + chr2_2:48195238-48195257 None:intergenic 50.0%
CGACCAATAGGTGAACCAAC+GGG - chr2_2:48195256-48195275 Msa0254640:CDS 50.0%
!! CTACCCGTTGGTTCACCTAT+TGG + chr2_2:48195262-48195281 None:intergenic 50.0%
TAGCACAGGAAGCGAAGGTT+TGG - chr2_2:48195279-48195298 Msa0254640:intron 50.0%
AGCACAGGAAGCGAAGGTTT+GGG - chr2_2:48195280-48195299 Msa0254640:intron 50.0%
! TCCCATGATGGTGAACCAAC+GGG - chr2_2:48195328-48195347 Msa0254640:intron 50.0%
!! ACCCGTTGGTTCACCATCAT+GGG + chr2_2:48195332-48195351 None:intergenic 50.0%
!! TACCCGTTGGTTCACCATCA+TGG + chr2_2:48195333-48195352 None:intergenic 50.0%
TAGCACAGGAAGCGAAGGTT+TGG - chr2_2:48195279-48195298 Msa0254640:intron 50.0%
AGCACAGGAAGCGAAGGTTT+GGG - chr2_2:48195280-48195299 Msa0254640:intron 50.0%
TTTGGGGACTGATCCGCAAA+TGG - chr2_2:48195369-48195388 Msa0254640:intron 50.0%
! ACTTTTGCTTCCACGTGTCC+TGG - chr2_2:48196101-48196120 Msa0254640:intron 50.0%
TATCAAAGGTCCAGGACACG+TGG + chr2_2:48196114-48196133 None:intergenic 50.0%
!! ACAGTCTGGTTCTTCAGGCT+TGG - chr2_2:48197400-48197419 Msa0254640:intron 50.0%
! GGTTCTTCAGGCTTGGTCAT+AGG - chr2_2:48197407-48197426 Msa0254640:intron 50.0%
TACACTCTACGACTAGGCTC+CGG + chr2_2:48197739-48197758 None:intergenic 50.0%
ATCTTGTGATTAGGGGCGGA+TGG + chr2_2:48198001-48198020 None:intergenic 50.0%
GGTTGGCAGAACTGGTATGT+GGG + chr2_2:48198952-48198971 None:intergenic 50.0%
TTAGGCACATAGTTGGGGGT+TGG + chr2_2:48198969-48198988 None:intergenic 50.0%
GTTGATCGAAAGAAACCCCC+GGG - chr2_2:48199404-48199423 Msa0254640:intron 50.0%
AAGAATCCACCAGGTAGCAC+AGG - chr2_2:48199530-48199549 Msa0254640:intron 50.0%
TCTTACTGCCAATGAGTGGG+TGG - chr2_2:48199640-48199659 Msa0254640:intron 50.0%
CATCTGGTCGTGACCGAAGT+CGG + chr2_2:48194802-48194821 None:intergenic 55.0%
AGTTAGACCAGGAGGAGGAC+TGG - chr2_2:48195204-48195223 Msa0254640:intron 55.0%
GTTAGACCAGGAGGAGGACT+GGG - chr2_2:48195205-48195224 Msa0254640:intron 55.0%
TTAGACCAGGAGGAGGACTG+GGG - chr2_2:48195206-48195225 Msa0254640:intron 55.0%
GCACAGGAAGCGAAGGTTTG+GGG - chr2_2:48195281-48195300 Msa0254640:intron 55.0%
GCACAGGAAGCGAAGGTTTG+GGG - chr2_2:48195281-48195300 Msa0254640:intron 55.0%
!! TTACCGGCTTCATGACCGGT+TGG - chr2_2:48196647-48196666 Msa0254640:intron 55.0%
GAACCAACCGGTCATGAAGC+CGG + chr2_2:48196653-48196672 None:intergenic 55.0%
! GGGTTGGCAGAACTGGTATG+TGG + chr2_2:48198953-48198972 None:intergenic 55.0%
! TAGTTGGGGGTTGGCAGAAC+TGG + chr2_2:48198960-48198979 None:intergenic 55.0%
TAGCACAGGAAGCGGAGGAT+TGG - chr2_2:48199427-48199446 Msa0254640:intron 55.0%
AGCACAGGAAGCGGAGGATT+GGG - chr2_2:48199428-48199447 Msa0254640:intron 55.0%
ACGGAGAATACTCAGCGACG+TGG - chr2_2:48199464-48199483 Msa0254640:intron 55.0%
GAGAATACTCAGCGACGTGG+AGG - chr2_2:48199467-48199486 Msa0254640:intron 55.0%
AATCCACCAGGTAGCACAGG+CGG - chr2_2:48199533-48199552 Msa0254640:intron 55.0%
TATTTGGGGGTGGGCAGCAC+TGG + chr2_2:48194451-48194470 None:intergenic 60.0%
CGACTTCGGTCACGACCAGA+TGG - chr2_2:48194800-48194819 Msa0254640:CDS 60.0%
GGTGAACCAACGGGTAGCAC+AGG - chr2_2:48195265-48195284 Msa0254640:CDS 60.0%
TCGCTTCCTGTGCTACCCGT+TGG + chr2_2:48195274-48195293 None:intergenic 60.0%
ACGGGTAGCACAGGAAGCGA+AGG - chr2_2:48195274-48195293 Msa0254640:CDS 60.0%
GGTGAACCAACGGGTAGCAC+AGG - chr2_2:48195265-48195284 Msa0254640:CDS 60.0%
TCGCTTCCTGTGCTACCCGT+TGG + chr2_2:48195274-48195293 None:intergenic 60.0%
ACGGGTAGCACAGGAAGCGA+AGG - chr2_2:48195274-48195293 Msa0254640:CDS 60.0%
! GATTTTGTCGCCACCGTGCC+AGG - chr2_2:48197608-48197627 Msa0254640:intron 60.0%
ATTGTCTTCGCCTGGCACGG+TGG + chr2_2:48197621-48197640 None:intergenic 60.0%
TCTACGACTAGGCTCCGGTG+AGG + chr2_2:48197734-48197753 None:intergenic 60.0%
AAGAAACCCCCGGGTAGCAC+AGG - chr2_2:48199413-48199432 Msa0254640:intron 60.0%
GGAAGCGGAGGATTGGGAAC+TGG - chr2_2:48199434-48199453 Msa0254640:intron 60.0%
TAGCACAGGCGGAGGAGGAT+TGG - chr2_2:48199544-48199563 Msa0254640:intron 60.0%
AGCACAGGCGGAGGAGGATT+GGG - chr2_2:48199545-48199564 Msa0254640:intron 60.0%
!! GGTGGGCAGCACTGGCATGT+GGG + chr2_2:48194443-48194462 None:intergenic 65.0%
TCAGTCCCCAGTCCTCCTCC+TGG + chr2_2:48195214-48195233 None:intergenic 65.0%
TCCGCTTCCTGTGCTACCCG+GGG + chr2_2:48199423-48199442 None:intergenic 65.0%
CTCCGCTTCCTGTGCTACCC+GGG + chr2_2:48199424-48199443 None:intergenic 65.0%
CCTCCGCTTCCTGTGCTACC+CGG + chr2_2:48199425-48199444 None:intergenic 65.0%
GGCGGAGGAGGATTGGGAAC+TGG - chr2_2:48199551-48199570 Msa0254640:intron 65.0%
!! GGGTGGGCAGCACTGGCATG+TGG + chr2_2:48194444-48194463 None:intergenic 70.0%
CCGCTTCCTGTGCTACCCGG+GGG + chr2_2:48199422-48199441 None:intergenic 70.0%
CCCCCGGGTAGCACAGGAAG+CGG - chr2_2:48199419-48199438 Msa0254640:intron 70.0%
CCGGGTAGCACAGGAAGCGG+AGG - chr2_2:48199422-48199441 Msa0254640:intron 70.0%
CCTCCGCCTGTGCTACCTGG+TGG + chr2_2:48199539-48199558 None:intergenic 70.0%
CCACCAGGTAGCACAGGCGG+AGG - chr2_2:48199536-48199555 Msa0254640:intron 70.0%
CCTCCTCCGCCTGTGCTACC+TGG + chr2_2:48199542-48199561 None:intergenic 70.0%
CCAGGTAGCACAGGCGGAGG+AGG - chr2_2:48199539-48199558 Msa0254640:intron 70.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 48194415 48199822 48194415 ID=Msa0254640;Name=Msa0254640
chr2_2 mRNA 48194415 48199822 48194415 ID=Msa0254640-mRNA-1;Parent=Msa0254640;Name=Msa0254640-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0.33|0.25|1|0.66|0.5|4|104|240
chr2_2 exon 48194415 48194867 48194415 ID=Msa0254640-mRNA-1:exon:14564;Parent=Msa0254640-mRNA-1
chr2_2 exon 48195228 48195297 48195228 ID=Msa0254640-mRNA-1:exon:14563;Parent=Msa0254640-mRNA-1
chr2_2 exon 48198870 48199087 48198870 ID=Msa0254640-mRNA-1:exon:14562;Parent=Msa0254640-mRNA-1
chr2_2 exon 48199737 48199822 48199737 ID=Msa0254640-mRNA-1:exon:14561;Parent=Msa0254640-mRNA-1
chr2_2 CDS 48199737 48199822 48199737 ID=Msa0254640-mRNA-1:cds;Parent=Msa0254640-mRNA-1
chr2_2 CDS 48198870 48199087 48198870 ID=Msa0254640-mRNA-1:cds;Parent=Msa0254640-mRNA-1
chr2_2 CDS 48195228 48195297 48195228 ID=Msa0254640-mRNA-1:cds;Parent=Msa0254640-mRNA-1
chr2_2 CDS 48194519 48194867 48194519 ID=Msa0254640-mRNA-1:cds;Parent=Msa0254640-mRNA-1
chr2_2 three_prime_UTR 48194415 48194518 48194415 ID=Msa0254640-mRNA-1:three_prime_utr;Parent=Msa0254640-mRNA-1
Gene Sequence

>Msa0254640

ATGGCTCTTGCAGCAGGTAGCTTCACCCACATGCCAGTGCTGCCCACCCCCAAATATGCGTCTAAAAAATCTATGACAATTACCATAAAATGTGCTAACAACAACAAAAACAAAACAAAAGTTTATGCAATGAAACCAATAGTTAGACCAGGAGGAGGACTGGGGACTGATCCGCAATCGACGATCAATCGACGACCAATAGGTGAACCAACGGGTAGCACAGGAAGCGAAGGTTTGGGGACTGATCCGCAATCGACGATCAATTCCCATGATGGTGAACCAACGGGTAGCACAGGAAGCGAAGGTAGCTTCACCCACATACCAGTTCTGCCAACCCCCAACTATGTGCCTAAAAAATCTATGACAATTACTATAAAATGTGCCAACAACAAGAAAAACAAAACAAAAGTTGATCGAAAGAAACCCCCGGGTAGCACAGGAAGCGGAGGATTGGGAACTGGTCCGAAAACGGAGAATACTCAGCGACGTGGAGGAAAAAAACCACCAAAAAATTCTGAGGCACCAAGTAATCGAAAGAATCCACCAGGTAGCACAGGCGGAGGAGGATTGGGAACTGGTGCACAAACAACTAGTACTCAGGTGGAGGATGATGAAGATCAACTTGACAACACTTTTGCATTCAATCTTACTGCCAATGAGTGGGTGGTGATTTTTCTTTTTTTGACCCTCTTTGTAGGTTCGACATTGTTTAAAGCACATTAA

Protein sequence

>Msa0254640

MALAAGSFTHMPVLPTPKYASKKSMTITIKCANNNKNKTKVYAMKPIVRPGGGLGTDPQSTINRRPIGEPTGSTGSEGLGTDPQSTINSHDGEPTGSTGSEGSFTHIPVLPTPNYVPKKSMTITIKCANNKKNKTKVDRKKPPGSTGSGGLGTGPKTENTQRRGGKKPPKNSEAPSNRKNPPGSTGGGGLGTGAQTTSTQVEDDEDQLDNTFAFNLTANEWVVIFLFLTLFVGSTLFKAH*