AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0960580


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0960580 MtrunA17_Chr6g0478671 91.626 203 17 0 182 384 9 211 6.12e-120 346
Msa0960580 MtrunA17_Chr6g0478671 75.500 200 38 3 3 191 6 205 4.60e-96 285
Msa0960580 MtrunA17_Chr6g0478661 87.129 202 15 3 1 191 1 202 2.33e-106 311
Msa0960580 MtrunA17_Chr6g0478661 85.417 192 28 0 192 383 16 207 4.43e-99 293
Msa0960580 MtrunA17_Chr6g0479071 79.082 196 36 2 192 382 20 215 1.06e-97 290
Msa0960580 MtrunA17_Chr6g0479071 70.244 205 45 4 3 191 7 211 3.22e-87 263
Msa0960580 MtrunA17_Chr6g0479081 82.162 185 32 1 199 382 27 211 9.10e-93 277
Msa0960580 MtrunA17_Chr6g0479081 67.164 201 54 4 3 191 7 207 2.64e-79 243
Msa0960580 MtrunA17_Chr1g0177471 41.808 177 91 9 200 373 74 241 9.50e-30 115
Msa0960580 MtrunA17_Chr1g0177471 40.000 170 89 7 24 184 74 239 3.83e-26 105
Msa0960580 MtrunA17_Chr4g0067041 39.130 184 102 8 193 374 64 239 1.90e-29 114
Msa0960580 MtrunA17_Chr4g0067041 40.678 177 92 7 17 184 64 236 1.43e-27 109
Msa0960580 MtrunA17_Chr7g0267291 37.500 176 98 7 192 363 48 215 3.45e-26 107
Msa0960580 MtrunA17_Chr7g0267291 35.294 170 87 8 11 164 43 205 6.85e-20 89.4
Msa0960580 MtrunA17_Chr7g0267301 34.409 186 105 7 192 370 52 227 8.72e-26 103
Msa0960580 MtrunA17_Chr7g0267301 32.683 205 101 10 6 183 33 227 9.45e-22 92.8
Msa0960580 MtrunA17_Chr7g0267181 42.949 156 82 6 197 350 57 207 1.13e-23 98.2
Msa0960580 MtrunA17_Chr7g0267181 41.558 154 77 6 21 164 57 207 1.22e-20 89.7
Msa0960580 MtrunA17_Chr7g0267281 32.836 201 114 8 183 373 36 225 6.36e-23 95.9
Msa0960580 MtrunA17_Chr7g0267281 31.606 193 101 10 5 173 31 216 4.86e-17 79.7
Msa0960580 MtrunA17_Chr7g0267231 30.481 187 115 7 193 375 52 227 2.03e-21 92.0
Msa0960580 MtrunA17_Chr7g0267231 31.373 204 103 11 5 183 31 222 9.38e-19 84.3
Msa0960580 MtrunA17_Chr6g0469211 35.263 190 88 6 176 352 1 168 6.17e-20 86.7
Msa0960580 MtrunA17_Chr6g0469211 36.686 169 77 6 11 166 17 168 5.81e-19 84.0
Msa0960580 MtrunA17_Chr2g0280851 29.333 150 100 3 196 344 37 181 2.02e-14 71.6
Msa0960580 MtrunA17_Chr3g0109121 34.091 132 74 5 200 324 86 211 1.25e-12 67.4
Msa0960580 MtrunA17_Chr7g0267321 29.577 142 93 4 192 330 181 318 1.69e-12 68.2
Msa0960580 MtrunA17_Chr5g0433201 32.515 163 78 5 200 330 97 259 5.69e-12 65.5
Msa0960580 MtrunA17_Chr1g0177521 34.483 174 100 7 206 373 51 216 2.80e-11 62.8
Msa0960580 MtrunA17_Chr1g0177571 32.117 137 87 5 202 336 39 171 9.93e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0960580 AT2G35980.1 39.130 184 103 6 192 373 50 226 2.47e-31 119
Msa0960580 AT2G35980.1 40.678 177 76 7 12 164 35 206 2.23e-27 108
Msa0960580 AT5G06320.1 40.761 184 97 8 192 373 57 230 2.46e-30 116
Msa0960580 AT5G06320.1 37.158 183 98 8 11 183 52 227 3.75e-25 102
Msa0960580 AT2G35460.1 37.705 183 102 8 193 373 65 237 2.96e-29 114
Msa0960580 AT2G35460.1 34.759 187 106 7 7 183 54 234 4.89e-26 105
Msa0960580 AT3G11650.1 34.426 183 111 6 192 373 64 238 7.25e-27 107
Msa0960580 AT3G11650.1 31.217 189 116 6 4 183 52 235 6.32e-24 99.4
Msa0960580 AT1G32270.2 30.968 155 98 6 204 355 1 149 2.05e-13 71.2
Msa0960580 AT1G32270.1 30.968 155 98 6 204 355 1 149 4.67e-13 70.5
Msa0960580 AT3G11660.1 30.128 156 98 5 181 330 16 166 1.24e-12 67.0
Msa0960580 AT3G52470.1 35.789 95 59 2 192 284 28 122 1.33e-12 67.0
Msa0960580 AT3G44220.1 27.128 188 126 9 188 373 27 205 4.55e-12 65.1
Msa0960580 AT2G35960.1 31.111 135 88 5 198 330 36 167 1.71e-11 63.5
Msa0960580 AT1G65690.1 33.540 161 92 9 192 344 74 227 6.44e-11 62.8

Find 70 sgRNAs with CRISPR-Local

Find 522 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTGGACCTATAGAATTTAA+AGG 0.197006 6_3:+80015797 Msa0960580:CDS
AGAATCAGTACTACATCTTC+TGG 0.301201 6_3:-80016053 None:intergenic
TAATTACCATCATCGTCTTC+TGG 0.307893 6_3:+80012081 Msa0960580:CDS
TCTTGGGATTTATAAAGATT+TGG 0.312711 6_3:+80012421 Msa0960580:CDS
CTCCTGGGACTAAAAGAAAA+TGG 0.314680 6_3:-80012578 None:intergenic
TAATTGCCATCATAGTCTTC+TGG 0.322897 6_3:+80015537 Msa0960580:CDS
TAGCAGTGGTGATTTCTTTA+CGG 0.343521 6_3:+80012604 Msa0960580:CDS
TCTTGGGATTTATAACGATT+TGG 0.354273 6_3:+80015877 Msa0960580:CDS
GCATTTCCTTTAAATTCTAT+AGG 0.390101 6_3:-80015803 None:intergenic
TTTCGAATTAGAGCTAAGTT+TGG 0.404007 6_3:+80015914 Msa0960580:CDS
AAACGACGACACTGCAGAAC+CGG 0.436027 6_3:-80012512 None:intergenic
CCTTTGGTTTCTTCTTCCAA+TGG 0.437143 6_3:+80015998 Msa0960580:CDS
AAACGACCACACTGAACAAC+GGG 0.439004 6_3:-80015968 None:intergenic
TATTCTGAAGAGACGCGTCT+TGG 0.440271 6_3:+80015860 Msa0960580:CDS
GACTGGTCGGTTTAATCCAC+CGG 0.447589 6_3:+80012493 Msa0960580:CDS
TTCTTATGTCCTTGATCAAA+GGG 0.447605 6_3:-80015764 None:intergenic
ATCACCACTGCTACATCTCC+TGG 0.448758 6_3:-80012594 None:intergenic
ACATGAAATTTCACGCTTGA+GGG 0.450161 6_3:-80012116 None:intergenic
ACGTGAAATTTCACGCTTGA+GGG 0.459607 6_3:-80015572 None:intergenic
ATAGACTATGATGTTGTTGT+TGG 0.461075 6_3:-80012222 None:intergenic
ATAGACTATGATGTTGTTGT+TGG 0.461075 6_3:-80015678 None:intergenic
TAGACTATGATGTTGTTGTT+GGG 0.464761 6_3:-80012221 None:intergenic
TAGACTATGATGTTGTTGTT+GGG 0.464761 6_3:-80015677 None:intergenic
ATTCATCACCAATATGGGTT+GGG 0.469338 6_3:+80012013 None:intergenic
ATCAATATTTATTTATATCA+CGG 0.470970 6_3:-80016087 None:intergenic
AGTTTGTCACCCTTTGATCA+AGG 0.474413 6_3:+80015755 Msa0960580:CDS
TGGTCGTTTGAGTGTTCCTT+TGG 0.477801 6_3:+80015982 Msa0960580:CDS
ACTTTGACACCCTTTGATCA+AGG 0.484433 6_3:+80012299 Msa0960580:CDS
ATTCTTATGTCCTTGATCAA+AGG 0.484538 6_3:-80015765 None:intergenic
TGGTGATGATGAGTTACTAT+TGG 0.487019 6_3:-80012558 None:intergenic
TACATGAAATTTCACGCTTG+AGG 0.487738 6_3:-80012117 None:intergenic
GGAAATGCTACGATCAAACT+TGG 0.491459 6_3:+80015818 Msa0960580:CDS
GAATCAGTACTACATCTTCT+GGG 0.496228 6_3:-80016052 None:intergenic
TATTCTGAAGAGACACGTCT+TGG 0.496905 6_3:+80012404 Msa0960580:CDS
ATTCTGAAGAGACGCGTCTT+GGG 0.499537 6_3:+80015861 Msa0960580:CDS
GGAAATTCTATCATCAAACT+TGG 0.500531 6_3:+80012362 Msa0960580:CDS
CTTGGACCTATCGAATTCAA+AGG 0.500883 6_3:+80012341 Msa0960580:CDS
GAAGAATCACTGCGATTGCC+TGG 0.501972 6_3:+80015705 Msa0960580:CDS
AATTCATCACCAATATGGGT+TGG 0.511959 6_3:+80012012 None:intergenic
TATGGAAGCTTCTATAAGAC+TGG 0.528774 6_3:+80012476 Msa0960580:intron
TTCTATAGGTCCAAGAAAAG+TGG 0.532430 6_3:-80015789 None:intergenic
ATTCTGAAGAGACACGTCTT+GGG 0.539671 6_3:+80012405 Msa0960580:CDS
GAAATCATTGTCTTTGTACC+AGG 0.547898 6_3:-80015723 None:intergenic
AGACTATGATGTTGTTGTTG+GGG 0.552465 6_3:-80012220 None:intergenic
AGACTATGATGTTGTTGTTG+GGG 0.552465 6_3:-80015676 None:intergenic
TTCGATAGGTCCAAGAAAAG+TGG 0.557190 6_3:-80012333 None:intergenic
TACGTGAAATTTCACGCTTG+AGG 0.563533 6_3:-80015573 None:intergenic
GAAGAATCAAGGCCATTGCT+TGG 0.570010 6_3:+80012249 Msa0960580:intron
AATATAAGTTGTTGTTTGTG+AGG 0.572559 6_3:-80012166 None:intergenic
AATATAAGTTGTTGTTTGTG+AGG 0.572559 6_3:-80015622 None:intergenic
GAATTTCCTTTGAATTCGAT+AGG 0.573832 6_3:-80012347 None:intergenic
TGATGATGATGAGTTACCAT+TGG 0.575956 6_3:-80016014 None:intergenic
ATGAAATTTCACGCTTGAGG+GGG 0.578027 6_3:-80012114 None:intergenic
ATTGTCTTTGTACCAAGCAA+TGG 0.580644 6_3:-80012261 None:intergenic
GAAGCTTCTATAAGACTGGT+CGG 0.586174 6_3:+80012480 Msa0960580:intron
TACTATCCAGAAGACTATGA+TGG 0.586732 6_3:-80015543 None:intergenic
GAACTCAGTGAGAGTTGCAT+CGG 0.587890 6_3:-80015597 None:intergenic
TATTATCCAGAAGACGATGA+TGG 0.595014 6_3:-80012087 None:intergenic
GTTGTTTGTGAGGTTGAACT+CGG 0.599773 6_3:-80012156 None:intergenic
TCACCACTGCTACATCTCCT+GGG 0.601600 6_3:-80012593 None:intergenic
GAACTCGGTGAGAGTTGCAT+CGG 0.601986 6_3:-80012141 None:intergenic
CATGAAATTTCACGCTTGAG+GGG 0.610657 6_3:-80012115 None:intergenic
CGACGACACTGCAGAACCGG+TGG 0.610886 6_3:-80012509 None:intergenic
CAAACGACCACACTGAACAA+CGG 0.625149 6_3:-80015969 None:intergenic
AAGCCACCCGTTGTTCAGTG+TGG 0.630778 6_3:+80015962 Msa0960580:CDS
CGATGATGGTAATTACGAAG+AGG 0.647200 6_3:-80012073 None:intergenic
CTATGATGGCAATTACGAAG+AGG 0.663447 6_3:-80015529 None:intergenic
AGTCCCAGGAGATGTAGCAG+TGG 0.686170 6_3:+80012590 Msa0960580:CDS
CTATTGGAAGAAGAAATCAA+AGG 0.724031 6_3:-80012542 None:intergenic
CCATTGGAAGAAGAAACCAA+AGG 0.754982 6_3:-80015998 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAATTAAAAAAAAAT+AGG - chr6_3:80013875-80013894 None:intergenic 0.0%
!!! TATTTTTTTTTAATTTTTTT+TGG + chr6_3:80013874-80013893 Msa0960580:intron 0.0%
!! AAAAAAAATTAAAAAAAAAT+AGG - chr6_3:80013875-80013894 None:intergenic 0.0%
!!! TATTTTTTTTTAATTTTTTT+TGG + chr6_3:80013874-80013893 Msa0960580:intron 0.0%
!! TTGTTACAAAAATTATAATT+TGG + chr6_3:80013342-80013361 Msa0960580:intron 10.0%
!! TTATAACTTCATAAAAAATA+AGG + chr6_3:80013753-80013772 Msa0960580:intron 10.0%
!! TATAACTTCATAAAAAATAA+GGG + chr6_3:80013754-80013773 Msa0960580:intron 10.0%
!! TTGTTACAAAAATTATAATT+TGG + chr6_3:80013342-80013361 Msa0960580:intron 10.0%
!! TTATAACTTCATAAAAAATA+AGG + chr6_3:80013753-80013772 Msa0960580:intron 10.0%
!! TATAACTTCATAAAAAATAA+GGG + chr6_3:80013754-80013773 Msa0960580:intron 10.0%
!!! TTTTTGAAAGGATTTAAAAA+AGG + chr6_3:80014757-80014776 Msa0960580:intron 15.0%
!!! TTTTGAAAGGATTTAAAAAA+GGG + chr6_3:80014758-80014777 Msa0960580:intron 15.0%
!!! TTTTTGAAAGGATTTAAAAA+AGG + chr6_3:80014757-80014776 Msa0960580:intron 15.0%
!!! TTTTGAAAGGATTTAAAAAA+GGG + chr6_3:80014758-80014777 Msa0960580:intron 15.0%
!!! TATCGATTCAAATAAAAAGA+AGG - chr6_3:80012759-80012778 None:intergenic 20.0%
!! TGTAACAAAAATGTCTAATA+TGG - chr6_3:80013330-80013349 None:intergenic 20.0%
!! TAATAGTGACTAATCTTTAT+CGG - chr6_3:80013460-80013479 None:intergenic 20.0%
!! GTTAGTTAATTCATATAAAG+TGG + chr6_3:80013531-80013550 Msa0960580:intron 20.0%
!!! TTTTTTAATTTTTTTTGGCC+TGG + chr6_3:80013879-80013898 Msa0960580:intron 20.0%
!!! ACTTTTTTTTTTGACAATCA+GGG - chr6_3:80014020-80014039 None:intergenic 20.0%
!!! TACTTTTTTTTTTGACAATC+AGG - chr6_3:80014021-80014040 None:intergenic 20.0%
!! GTTATTCAATATACCTAAAA+AGG - chr6_3:80014606-80014625 None:intergenic 20.0%
!! CATTGAATAATTAATGTATC+CGG - chr6_3:80014654-80014673 None:intergenic 20.0%
!!! TAAGCAAAAAACACTTTTTT+AGG - chr6_3:80014679-80014698 None:intergenic 20.0%
!! GGAATTATTTGTAAATGTTA+TGG + chr6_3:80014779-80014798 Msa0960580:intron 20.0%
!!! AAAAAACTTTTAAACTTGAC+CGG - chr6_3:80014953-80014972 None:intergenic 20.0%
!! TATTTGTCTCAAAAGAAATA+TGG - chr6_3:80015217-80015236 None:intergenic 20.0%
!!! TTTTGAATTTGTTTTTGTGA+TGG - chr6_3:80015448-80015467 None:intergenic 20.0%
!!! TATCGATTCAAATAAAAAGA+AGG - chr6_3:80012759-80012778 None:intergenic 20.0%
!! TGTAACAAAAATGTCTAATA+TGG - chr6_3:80013330-80013349 None:intergenic 20.0%
!! TAATAGTGACTAATCTTTAT+CGG - chr6_3:80013460-80013479 None:intergenic 20.0%
!! GTTAGTTAATTCATATAAAG+TGG + chr6_3:80013531-80013550 Msa0960580:intron 20.0%
!!! TTTTTTAATTTTTTTTGGCC+TGG + chr6_3:80013879-80013898 Msa0960580:intron 20.0%
!!! ACTTTTTTTTTTGACAATCA+GGG - chr6_3:80014020-80014039 None:intergenic 20.0%
!!! TACTTTTTTTTTTGACAATC+AGG - chr6_3:80014021-80014040 None:intergenic 20.0%
!! GTTATTCAATATACCTAAAA+AGG - chr6_3:80014606-80014625 None:intergenic 20.0%
!! CATTGAATAATTAATGTATC+CGG - chr6_3:80014654-80014673 None:intergenic 20.0%
!!! TAAGCAAAAAACACTTTTTT+AGG - chr6_3:80014679-80014698 None:intergenic 20.0%
!! GGAATTATTTGTAAATGTTA+TGG + chr6_3:80014779-80014798 Msa0960580:intron 20.0%
!!! AAAAAACTTTTAAACTTGAC+CGG - chr6_3:80014953-80014972 None:intergenic 20.0%
!! TATTTGTCTCAAAAGAAATA+TGG - chr6_3:80015217-80015236 None:intergenic 20.0%
!!! TTTTGAATTTGTTTTTGTGA+TGG - chr6_3:80015448-80015467 None:intergenic 20.0%
!!! AATATAAGTTGTTGTTTGTG+AGG - chr6_3:80012169-80012188 None:intergenic 25.0%
! TCTTGGGATTTATAAAGATT+TGG + chr6_3:80012421-80012440 Msa0960580:CDS 25.0%
! ATATTGAAACAAACCTTTGA+TGG + chr6_3:80012795-80012814 Msa0960580:intron 25.0%
!! TATTCCATTTTAGATCTATC+TGG + chr6_3:80012852-80012871 Msa0960580:intron 25.0%
!!! AATAACTTGTTAGCCAAAAT+TGG + chr6_3:80012940-80012959 Msa0960580:intron 25.0%
!! ATTCAGTAGAACTTGATAAT+TGG + chr6_3:80013078-80013097 Msa0960580:intron 25.0%
! ATTAAGAAAAGATGATAGCT+CGG + chr6_3:80013374-80013393 Msa0960580:intron 25.0%
! AATAGTGACTAATCTTTATC+GGG - chr6_3:80013459-80013478 None:intergenic 25.0%
!! GATTAGTCACTATTAAATAG+AGG + chr6_3:80013465-80013484 Msa0960580:intron 25.0%
!!! ACATCATATTTTGTTGTAGT+CGG - chr6_3:80013602-80013621 None:intergenic 25.0%
!!! TCACTATTTGAGTTGATTTT+AGG + chr6_3:80013627-80013646 Msa0960580:intron 25.0%
! ACTGAGTATATATGGAAAAT+AGG - chr6_3:80013947-80013966 None:intergenic 25.0%
! ATCCAAAAAGACAAATAACA+AGG + chr6_3:80014113-80014132 Msa0960580:intron 25.0%
!! AGAAAATTACAACTTTGAGA+TGG + chr6_3:80014262-80014281 Msa0960580:intron 25.0%
! TTATGTGATTGTACTATAAC+CGG - chr6_3:80014322-80014341 None:intergenic 25.0%
!! TTTTGTTCCACTCAAATTAT+AGG - chr6_3:80014417-80014436 None:intergenic 25.0%
!! TTTTTGCTTATAAATGTGAC+CGG - chr6_3:80014689-80014708 None:intergenic 25.0%
!! TAAGCAAAAAACACCTTTTT+AGG + chr6_3:80014590-80014609 Msa0960580:intron 25.0%
!! TTTTTGCTTATAAATGTGAC+CGG + chr6_3:80014689-80014708 Msa0960580:intron 25.0%
! GTATTCAAGACTTACAAAAT+GGG + chr6_3:80014724-80014743 Msa0960580:intron 25.0%
!!! TAGCATTTTGCTTTTTAATG+TGG + chr6_3:80014911-80014930 Msa0960580:intron 25.0%
!!! ATTTTTTTTTCCTTGTGTTC+TGG + chr6_3:80014980-80014999 Msa0960580:intron 25.0%
! CTTTCATCAACGATATTTAT+AGG + chr6_3:80015004-80015023 Msa0960580:intron 25.0%
! AGATAGATTTGAAGATAAGA+AGG - chr6_3:80015071-80015090 None:intergenic 25.0%
!!! ATTCTCGTATTGATTGTAAT+TGG + chr6_3:80015136-80015155 Msa0960580:intron 25.0%
!! TGTTGGAATTCATGAATTTT+GGG - chr6_3:80015373-80015392 None:intergenic 25.0%
!!! AATATAAGTTGTTGTTTGTG+AGG - chr6_3:80012169-80012188 None:intergenic 25.0%
! GCATTTCCTTTAAATTCTAT+AGG - chr6_3:80015806-80015825 None:intergenic 25.0%
!!! AATATAAGTTGTTGTTTGTG+AGG - chr6_3:80012169-80012188 None:intergenic 25.0%
! TCTTGGGATTTATAAAGATT+TGG + chr6_3:80012421-80012440 Msa0960580:CDS 25.0%
! ATATTGAAACAAACCTTTGA+TGG + chr6_3:80012795-80012814 Msa0960580:intron 25.0%
!! TATTCCATTTTAGATCTATC+TGG + chr6_3:80012852-80012871 Msa0960580:intron 25.0%
!!! AATAACTTGTTAGCCAAAAT+TGG + chr6_3:80012940-80012959 Msa0960580:intron 25.0%
!! ATTCAGTAGAACTTGATAAT+TGG + chr6_3:80013078-80013097 Msa0960580:intron 25.0%
! ATTAAGAAAAGATGATAGCT+CGG + chr6_3:80013374-80013393 Msa0960580:intron 25.0%
! AATAGTGACTAATCTTTATC+GGG - chr6_3:80013459-80013478 None:intergenic 25.0%
!! GATTAGTCACTATTAAATAG+AGG + chr6_3:80013465-80013484 Msa0960580:intron 25.0%
!!! ACATCATATTTTGTTGTAGT+CGG - chr6_3:80013602-80013621 None:intergenic 25.0%
!!! TCACTATTTGAGTTGATTTT+AGG + chr6_3:80013627-80013646 Msa0960580:intron 25.0%
! ACTGAGTATATATGGAAAAT+AGG - chr6_3:80013947-80013966 None:intergenic 25.0%
! ATCCAAAAAGACAAATAACA+AGG + chr6_3:80014113-80014132 Msa0960580:intron 25.0%
!! AGAAAATTACAACTTTGAGA+TGG + chr6_3:80014262-80014281 Msa0960580:intron 25.0%
! TTATGTGATTGTACTATAAC+CGG - chr6_3:80014322-80014341 None:intergenic 25.0%
!! TTTTGTTCCACTCAAATTAT+AGG - chr6_3:80014417-80014436 None:intergenic 25.0%
!! TTTTTGCTTATAAATGTGAC+CGG - chr6_3:80014689-80014708 None:intergenic 25.0%
!! TAAGCAAAAAACACCTTTTT+AGG + chr6_3:80014590-80014609 Msa0960580:intron 25.0%
!! TTTTTGCTTATAAATGTGAC+CGG + chr6_3:80014689-80014708 Msa0960580:intron 25.0%
! GTATTCAAGACTTACAAAAT+GGG + chr6_3:80014724-80014743 Msa0960580:intron 25.0%
!!! TAGCATTTTGCTTTTTAATG+TGG + chr6_3:80014911-80014930 Msa0960580:intron 25.0%
!!! ATTTTTTTTTCCTTGTGTTC+TGG + chr6_3:80014980-80014999 Msa0960580:intron 25.0%
! CTTTCATCAACGATATTTAT+AGG + chr6_3:80015004-80015023 Msa0960580:intron 25.0%
! AGATAGATTTGAAGATAAGA+AGG - chr6_3:80015071-80015090 None:intergenic 25.0%
!!! ATTCTCGTATTGATTGTAAT+TGG + chr6_3:80015136-80015155 Msa0960580:intron 25.0%
!! TGTTGGAATTCATGAATTTT+GGG - chr6_3:80015373-80015392 None:intergenic 25.0%
!!! AATATAAGTTGTTGTTTGTG+AGG - chr6_3:80012169-80012188 None:intergenic 25.0%
! GCATTTCCTTTAAATTCTAT+AGG - chr6_3:80015806-80015825 None:intergenic 25.0%
! TAGACTATGATGTTGTTGTT+GGG - chr6_3:80012224-80012243 None:intergenic 30.0%
ATAGACTATGATGTTGTTGT+TGG - chr6_3:80012225-80012244 None:intergenic 30.0%
AGTCTATTATCGAAGAATCA+AGG + chr6_3:80012238-80012257 Msa0960580:intron 30.0%
! TTTTTGTGTCCTTGATCAAA+GGG - chr6_3:80012311-80012330 None:intergenic 30.0%
! ATTTTTGTGTCCTTGATCAA+AGG - chr6_3:80012312-80012331 None:intergenic 30.0%
!! CACAAAAATACCACTTTTCT+TGG + chr6_3:80012323-80012342 Msa0960580:CDS 30.0%
GAATTTCCTTTGAATTCGAT+AGG - chr6_3:80012350-80012369 None:intergenic 30.0%
GGAAATTCTATCATCAAACT+TGG + chr6_3:80012362-80012381 Msa0960580:CDS 30.0%
ATTCGAATTAGAGCTAAGTA+TGG + chr6_3:80012458-80012477 Msa0960580:intron 30.0%
CTATTGGAAGAAGAAATCAA+AGG - chr6_3:80012545-80012564 None:intergenic 30.0%
TTGCTGCTCTATTTATATCA+CGG - chr6_3:80012631-80012650 None:intergenic 30.0%
AGCAACAGTTTGATATCTTT+AGG + chr6_3:80012646-80012665 Msa0960580:intron 30.0%
AACAGTTTGATATCTTTAGG+TGG + chr6_3:80012649-80012668 Msa0960580:intron 30.0%
ACAACCAGATAGATCTAAAA+TGG - chr6_3:80012859-80012878 None:intergenic 30.0%
! ATTTTAGATCTATCTGGTTG+TGG + chr6_3:80012858-80012877 Msa0960580:intron 30.0%
TCATAGATTTCTTTGGTTAC+CGG - chr6_3:80013134-80013153 None:intergenic 30.0%
CCACTATTTATGTGGATAAT+GGG - chr6_3:80013269-80013288 None:intergenic 30.0%
TCCACTATTTATGTGGATAA+TGG - chr6_3:80013270-80013289 None:intergenic 30.0%
!!! TGGTGTAACTCTTTTTTCAA+GGG + chr6_3:80013551-80013570 Msa0960580:intron 30.0%
!!! TAATTTTTTTTGGCCTGGTT+TGG + chr6_3:80013884-80013903 Msa0960580:intron 30.0%
ATACTTGCACTGAGTATATA+TGG - chr6_3:80013955-80013974 None:intergenic 30.0%
!!! GTCCTTGTTATTTGTCTTTT+TGG - chr6_3:80014118-80014137 None:intergenic 30.0%
! AGTGTGGTTTAGAATTAACT+TGG + chr6_3:80014215-80014234 Msa0960580:intron 30.0%
TTTCCACCCAAATGTTATTA+TGG + chr6_3:80014380-80014399 Msa0960580:intron 30.0%
ACTTCATCTCAAGTCTTAAT+TGG - chr6_3:80014525-80014544 None:intergenic 30.0%
ATCTAGCATATAAATGTGAC+CGG + chr6_3:80014632-80014651 Msa0960580:intron 30.0%
GGTATTCAAGACTTACAAAA+TGG + chr6_3:80014723-80014742 Msa0960580:intron 30.0%
AATCCTTTCAAAAAAGACCA+TGG - chr6_3:80014751-80014770 None:intergenic 30.0%
ACGATATTTATAGGCTGTAA+CGG + chr6_3:80015013-80015032 Msa0960580:intron 30.0%
!! CGTATTGATTGTAATTGGTA+AGG + chr6_3:80015141-80015160 Msa0960580:intron 30.0%
TAATTGGTAAGGTAGTTTGA+TGG + chr6_3:80015152-80015171 Msa0960580:intron 30.0%
AATTGGTAAGGTAGTTTGAT+GGG + chr6_3:80015153-80015172 Msa0960580:intron 30.0%
AACGAAACAATTGTAATACG+TGG + chr6_3:80015246-80015265 Msa0960580:intron 30.0%
ACGAAACAATTGTAATACGT+GGG + chr6_3:80015247-80015266 Msa0960580:intron 30.0%
!! TGAGAACATTGACTTACTTT+GGG - chr6_3:80015301-80015320 None:intergenic 30.0%
!! ATGAGAACATTGACTTACTT+TGG - chr6_3:80015302-80015321 None:intergenic 30.0%
CATTGCTGTGTATATTTACA+AGG + chr6_3:80015319-80015338 Msa0960580:intron 30.0%
!! GAATTCATGAATTTTGGGTA+TGG - chr6_3:80015368-80015387 None:intergenic 30.0%
! GTGTTGGAATTCATGAATTT+TGG - chr6_3:80015374-80015393 None:intergenic 30.0%
!!! GTTGTGTACTTTTAAAGTGT+TGG - chr6_3:80015390-80015409 None:intergenic 30.0%
!!! TTTGCGGTTGATGAATTTTA+TGG - chr6_3:80015419-80015438 None:intergenic 30.0%
AAAAACCTCATCACCAATAT+GGG + chr6_3:80015464-80015483 Msa0960580:intron 30.0%
! TAGACTATGATGTTGTTGTT+GGG - chr6_3:80012224-80012243 None:intergenic 30.0%
ATAGACTATGATGTTGTTGT+TGG - chr6_3:80012225-80012244 None:intergenic 30.0%
TTCTTATGTCCTTGATCAAA+GGG - chr6_3:80015767-80015786 None:intergenic 30.0%
ATTCTTATGTCCTTGATCAA+AGG - chr6_3:80015768-80015787 None:intergenic 30.0%
!! CATAAGAATACCACTTTTCT+TGG + chr6_3:80015779-80015798 Msa0960580:CDS 30.0%
CTTGGACCTATAGAATTTAA+AGG + chr6_3:80015797-80015816 Msa0960580:CDS 30.0%
TCTTGGGATTTATAACGATT+TGG + chr6_3:80015877-80015896 Msa0960580:CDS 30.0%
TTTCGAATTAGAGCTAAGTT+TGG + chr6_3:80015914-80015933 Msa0960580:CDS 30.0%
! TTTGGCAGCTTTTATAAAAG+TGG + chr6_3:80015932-80015951 Msa0960580:CDS 30.0%
! TAGACTATGATGTTGTTGTT+GGG - chr6_3:80012224-80012243 None:intergenic 30.0%
ATAGACTATGATGTTGTTGT+TGG - chr6_3:80012225-80012244 None:intergenic 30.0%
AGTCTATTATCGAAGAATCA+AGG + chr6_3:80012238-80012257 Msa0960580:intron 30.0%
! TTTTTGTGTCCTTGATCAAA+GGG - chr6_3:80012311-80012330 None:intergenic 30.0%
! ATTTTTGTGTCCTTGATCAA+AGG - chr6_3:80012312-80012331 None:intergenic 30.0%
!! CACAAAAATACCACTTTTCT+TGG + chr6_3:80012323-80012342 Msa0960580:CDS 30.0%
GAATTTCCTTTGAATTCGAT+AGG - chr6_3:80012350-80012369 None:intergenic 30.0%
GGAAATTCTATCATCAAACT+TGG + chr6_3:80012362-80012381 Msa0960580:CDS 30.0%
ATTCGAATTAGAGCTAAGTA+TGG + chr6_3:80012458-80012477 Msa0960580:intron 30.0%
CTATTGGAAGAAGAAATCAA+AGG - chr6_3:80012545-80012564 None:intergenic 30.0%
TTGCTGCTCTATTTATATCA+CGG - chr6_3:80012631-80012650 None:intergenic 30.0%
AGCAACAGTTTGATATCTTT+AGG + chr6_3:80012646-80012665 Msa0960580:intron 30.0%
AACAGTTTGATATCTTTAGG+TGG + chr6_3:80012649-80012668 Msa0960580:intron 30.0%
ACAACCAGATAGATCTAAAA+TGG - chr6_3:80012859-80012878 None:intergenic 30.0%
! ATTTTAGATCTATCTGGTTG+TGG + chr6_3:80012858-80012877 Msa0960580:intron 30.0%
TCATAGATTTCTTTGGTTAC+CGG - chr6_3:80013134-80013153 None:intergenic 30.0%
CCACTATTTATGTGGATAAT+GGG - chr6_3:80013269-80013288 None:intergenic 30.0%
TCCACTATTTATGTGGATAA+TGG - chr6_3:80013270-80013289 None:intergenic 30.0%
!!! TGGTGTAACTCTTTTTTCAA+GGG + chr6_3:80013551-80013570 Msa0960580:intron 30.0%
!!! TAATTTTTTTTGGCCTGGTT+TGG + chr6_3:80013884-80013903 Msa0960580:intron 30.0%
ATACTTGCACTGAGTATATA+TGG - chr6_3:80013955-80013974 None:intergenic 30.0%
!!! GTCCTTGTTATTTGTCTTTT+TGG - chr6_3:80014118-80014137 None:intergenic 30.0%
! AGTGTGGTTTAGAATTAACT+TGG + chr6_3:80014215-80014234 Msa0960580:intron 30.0%
TTTCCACCCAAATGTTATTA+TGG + chr6_3:80014380-80014399 Msa0960580:intron 30.0%
ACTTCATCTCAAGTCTTAAT+TGG - chr6_3:80014525-80014544 None:intergenic 30.0%
ATCTAGCATATAAATGTGAC+CGG + chr6_3:80014632-80014651 Msa0960580:intron 30.0%
GGTATTCAAGACTTACAAAA+TGG + chr6_3:80014723-80014742 Msa0960580:intron 30.0%
AATCCTTTCAAAAAAGACCA+TGG - chr6_3:80014751-80014770 None:intergenic 30.0%
ACGATATTTATAGGCTGTAA+CGG + chr6_3:80015013-80015032 Msa0960580:intron 30.0%
!! CGTATTGATTGTAATTGGTA+AGG + chr6_3:80015141-80015160 Msa0960580:intron 30.0%
TAATTGGTAAGGTAGTTTGA+TGG + chr6_3:80015152-80015171 Msa0960580:intron 30.0%
AATTGGTAAGGTAGTTTGAT+GGG + chr6_3:80015153-80015172 Msa0960580:intron 30.0%
AACGAAACAATTGTAATACG+TGG + chr6_3:80015246-80015265 Msa0960580:intron 30.0%
ACGAAACAATTGTAATACGT+GGG + chr6_3:80015247-80015266 Msa0960580:intron 30.0%
!! TGAGAACATTGACTTACTTT+GGG - chr6_3:80015301-80015320 None:intergenic 30.0%
!! ATGAGAACATTGACTTACTT+TGG - chr6_3:80015302-80015321 None:intergenic 30.0%
CATTGCTGTGTATATTTACA+AGG + chr6_3:80015319-80015338 Msa0960580:intron 30.0%
!! GAATTCATGAATTTTGGGTA+TGG - chr6_3:80015368-80015387 None:intergenic 30.0%
! GTGTTGGAATTCATGAATTT+TGG - chr6_3:80015374-80015393 None:intergenic 30.0%
!!! GTTGTGTACTTTTAAAGTGT+TGG - chr6_3:80015390-80015409 None:intergenic 30.0%
!!! TTTGCGGTTGATGAATTTTA+TGG - chr6_3:80015419-80015438 None:intergenic 30.0%
AAAAACCTCATCACCAATAT+GGG + chr6_3:80015464-80015483 Msa0960580:intron 30.0%
! TAGACTATGATGTTGTTGTT+GGG - chr6_3:80012224-80012243 None:intergenic 30.0%
ATAGACTATGATGTTGTTGT+TGG - chr6_3:80012225-80012244 None:intergenic 30.0%
TTCTTATGTCCTTGATCAAA+GGG - chr6_3:80015767-80015786 None:intergenic 30.0%
ATTCTTATGTCCTTGATCAA+AGG - chr6_3:80015768-80015787 None:intergenic 30.0%
!! CATAAGAATACCACTTTTCT+TGG + chr6_3:80015779-80015798 Msa0960580:CDS 30.0%
CTTGGACCTATAGAATTTAA+AGG + chr6_3:80015797-80015816 Msa0960580:CDS 30.0%
TCTTGGGATTTATAACGATT+TGG + chr6_3:80015877-80015896 Msa0960580:CDS 30.0%
TTTCGAATTAGAGCTAAGTT+TGG + chr6_3:80015914-80015933 Msa0960580:CDS 30.0%
! TTTGGCAGCTTTTATAAAAG+TGG + chr6_3:80015932-80015951 Msa0960580:CDS 30.0%
TAATTACCATCATCGTCTTC+TGG + chr6_3:80012081-80012100 Msa0960580:CDS 35.0%
TATTATCCAGAAGACGATGA+TGG - chr6_3:80012090-80012109 None:intergenic 35.0%
ACATGAAATTTCACGCTTGA+GGG - chr6_3:80012119-80012138 None:intergenic 35.0%
TACATGAAATTTCACGCTTG+AGG - chr6_3:80012120-80012139 None:intergenic 35.0%
! AGACTATGATGTTGTTGTTG+GGG - chr6_3:80012223-80012242 None:intergenic 35.0%
ATTGTCTTTGTACCAAGCAA+TGG - chr6_3:80012264-80012283 None:intergenic 35.0%
TATGGAAGCTTCTATAAGAC+TGG + chr6_3:80012476-80012495 Msa0960580:intron 35.0%
! TGGTGATGATGAGTTACTAT+TGG - chr6_3:80012561-80012580 None:intergenic 35.0%
TAGCAGTGGTGATTTCTTTA+CGG + chr6_3:80012604-80012623 Msa0960580:CDS 35.0%
CTGCAATATGTAGAAGACTT+TGG - chr6_3:80012823-80012842 None:intergenic 35.0%
! AATCGCATGTCTTCCAATTT+TGG - chr6_3:80012956-80012975 None:intergenic 35.0%
AAGACATGCGATTCTATTGA+AGG + chr6_3:80012963-80012982 Msa0960580:intron 35.0%
ATGGAAAAATGTCACGAAAC+TGG + chr6_3:80013199-80013218 Msa0960580:intron 35.0%
CCCATTATCCACATAAATAG+TGG + chr6_3:80013266-80013285 Msa0960580:intron 35.0%
!!! GTGGTGTAACTCTTTTTTCA+AGG + chr6_3:80013550-80013569 Msa0960580:intron 35.0%
!!! GGTGTAACTCTTTTTTCAAG+GGG + chr6_3:80013552-80013571 Msa0960580:intron 35.0%
!!! GTGTAACTCTTTTTTCAAGG+GGG + chr6_3:80013553-80013572 Msa0960580:intron 35.0%
!!! TGTAACTCTTTTTTCAAGGG+GGG + chr6_3:80013554-80013573 Msa0960580:intron 35.0%
GTAACCTAAGAAAATGACCT+CGG - chr6_3:80013677-80013696 None:intergenic 35.0%
!! GAGGTCATTTTCTTAGGTTA+CGG + chr6_3:80013676-80013695 Msa0960580:intron 35.0%
!! AGGTCATTTTCTTAGGTTAC+GGG + chr6_3:80013677-80013696 Msa0960580:intron 35.0%
GCAAAAAAATTTCGTAGGTC+AGG - chr6_3:80013821-80013840 None:intergenic 35.0%
!!! GACCTACGAAATTTTTTTGC+AGG + chr6_3:80013821-80013840 Msa0960580:intron 35.0%
! ACTTTTAAATAGGCCAAACC+AGG - chr6_3:80013900-80013919 None:intergenic 35.0%
GTTTGGCCTATTTAAAAGTC+TGG + chr6_3:80013901-80013920 Msa0960580:intron 35.0%
GAGATTCAAGTGAAAAAGTG+TGG + chr6_3:80014199-80014218 Msa0960580:intron 35.0%
ACATGCAACATTGCTAGATT+AGG + chr6_3:80014347-80014366 Msa0960580:intron 35.0%
TCACCATAATAACATTTGGG+TGG - chr6_3:80014386-80014405 None:intergenic 35.0%
GGCTCACCATAATAACATTT+GGG - chr6_3:80014389-80014408 None:intergenic 35.0%
AGGCTCACCATAATAACATT+TGG - chr6_3:80014390-80014409 None:intergenic 35.0%
CCACTCAAATTATAGGCTAA+AGG - chr6_3:80014410-80014429 None:intergenic 35.0%
CCTTTAGCCTATAATTTGAG+TGG + chr6_3:80014407-80014426 Msa0960580:intron 35.0%
TAAAGTTGAATGTCGTGATC+TGG - chr6_3:80014485-80014504 None:intergenic 35.0%
TTATTAACCAATACTCCCTC+CGG + chr6_3:80014558-80014577 Msa0960580:intron 35.0%
AATGCTAACAAGTGTCTCAA+AGG - chr6_3:80014898-80014917 None:intergenic 35.0%
CGATATTTATAGGCTGTAAC+GGG + chr6_3:80015014-80015033 Msa0960580:intron 35.0%
GATATTTATAGGCTGTAACG+GGG + chr6_3:80015015-80015034 Msa0960580:intron 35.0%
ACGTGGGAGTAGTTTATATT+AGG + chr6_3:80015263-80015282 Msa0960580:intron 35.0%
!! TTTGTGATGGTGAGATTTTG+CGG - chr6_3:80015435-80015454 None:intergenic 35.0%
CAAAAACCTCATCACCAATA+TGG + chr6_3:80015463-80015482 Msa0960580:intron 35.0%
TAATTGCCATCATAGTCTTC+TGG + chr6_3:80015537-80015556 Msa0960580:CDS 35.0%
TACTATCCAGAAGACTATGA+TGG - chr6_3:80015546-80015565 None:intergenic 35.0%
! AGACTATGATGTTGTTGTTG+GGG - chr6_3:80012223-80012242 None:intergenic 35.0%
GAAATCATTGTCTTTGTACC+AGG - chr6_3:80012270-80012289 None:intergenic 35.0%
TTCTATAGGTCCAAGAAAAG+TGG - chr6_3:80015792-80015811 None:intergenic 35.0%
! GCAGCTTTTATAAAAGTGGT+CGG + chr6_3:80015936-80015955 Msa0960580:CDS 35.0%
! TGATGATGATGAGTTACCAT+TGG - chr6_3:80016017-80016036 None:intergenic 35.0%
GAATCAGTACTACATCTTCT+GGG - chr6_3:80016055-80016074 None:intergenic 35.0%
AGAATCAGTACTACATCTTC+TGG - chr6_3:80016056-80016075 None:intergenic 35.0%
TAATTACCATCATCGTCTTC+TGG + chr6_3:80012081-80012100 Msa0960580:CDS 35.0%
TATTATCCAGAAGACGATGA+TGG - chr6_3:80012090-80012109 None:intergenic 35.0%
ACATGAAATTTCACGCTTGA+GGG - chr6_3:80012119-80012138 None:intergenic 35.0%
TACATGAAATTTCACGCTTG+AGG - chr6_3:80012120-80012139 None:intergenic 35.0%
! AGACTATGATGTTGTTGTTG+GGG - chr6_3:80012223-80012242 None:intergenic 35.0%
ATTGTCTTTGTACCAAGCAA+TGG - chr6_3:80012264-80012283 None:intergenic 35.0%
TATGGAAGCTTCTATAAGAC+TGG + chr6_3:80012476-80012495 Msa0960580:intron 35.0%
! TGGTGATGATGAGTTACTAT+TGG - chr6_3:80012561-80012580 None:intergenic 35.0%
TAGCAGTGGTGATTTCTTTA+CGG + chr6_3:80012604-80012623 Msa0960580:CDS 35.0%
CTGCAATATGTAGAAGACTT+TGG - chr6_3:80012823-80012842 None:intergenic 35.0%
! AATCGCATGTCTTCCAATTT+TGG - chr6_3:80012956-80012975 None:intergenic 35.0%
AAGACATGCGATTCTATTGA+AGG + chr6_3:80012963-80012982 Msa0960580:intron 35.0%
ATGGAAAAATGTCACGAAAC+TGG + chr6_3:80013199-80013218 Msa0960580:intron 35.0%
CCCATTATCCACATAAATAG+TGG + chr6_3:80013266-80013285 Msa0960580:intron 35.0%
!!! GTGGTGTAACTCTTTTTTCA+AGG + chr6_3:80013550-80013569 Msa0960580:intron 35.0%
!!! GGTGTAACTCTTTTTTCAAG+GGG + chr6_3:80013552-80013571 Msa0960580:intron 35.0%
!!! GTGTAACTCTTTTTTCAAGG+GGG + chr6_3:80013553-80013572 Msa0960580:intron 35.0%
!!! TGTAACTCTTTTTTCAAGGG+GGG + chr6_3:80013554-80013573 Msa0960580:intron 35.0%
GTAACCTAAGAAAATGACCT+CGG - chr6_3:80013677-80013696 None:intergenic 35.0%
!! GAGGTCATTTTCTTAGGTTA+CGG + chr6_3:80013676-80013695 Msa0960580:intron 35.0%
!! AGGTCATTTTCTTAGGTTAC+GGG + chr6_3:80013677-80013696 Msa0960580:intron 35.0%
GCAAAAAAATTTCGTAGGTC+AGG - chr6_3:80013821-80013840 None:intergenic 35.0%
!!! GACCTACGAAATTTTTTTGC+AGG + chr6_3:80013821-80013840 Msa0960580:intron 35.0%
! ACTTTTAAATAGGCCAAACC+AGG - chr6_3:80013900-80013919 None:intergenic 35.0%
GTTTGGCCTATTTAAAAGTC+TGG + chr6_3:80013901-80013920 Msa0960580:intron 35.0%
GAGATTCAAGTGAAAAAGTG+TGG + chr6_3:80014199-80014218 Msa0960580:intron 35.0%
ACATGCAACATTGCTAGATT+AGG + chr6_3:80014347-80014366 Msa0960580:intron 35.0%
TCACCATAATAACATTTGGG+TGG - chr6_3:80014386-80014405 None:intergenic 35.0%
GGCTCACCATAATAACATTT+GGG - chr6_3:80014389-80014408 None:intergenic 35.0%
AGGCTCACCATAATAACATT+TGG - chr6_3:80014390-80014409 None:intergenic 35.0%
CCACTCAAATTATAGGCTAA+AGG - chr6_3:80014410-80014429 None:intergenic 35.0%
CCTTTAGCCTATAATTTGAG+TGG + chr6_3:80014407-80014426 Msa0960580:intron 35.0%
TAAAGTTGAATGTCGTGATC+TGG - chr6_3:80014485-80014504 None:intergenic 35.0%
TTATTAACCAATACTCCCTC+CGG + chr6_3:80014558-80014577 Msa0960580:intron 35.0%
AATGCTAACAAGTGTCTCAA+AGG - chr6_3:80014898-80014917 None:intergenic 35.0%
CGATATTTATAGGCTGTAAC+GGG + chr6_3:80015014-80015033 Msa0960580:intron 35.0%
GATATTTATAGGCTGTAACG+GGG + chr6_3:80015015-80015034 Msa0960580:intron 35.0%
ACGTGGGAGTAGTTTATATT+AGG + chr6_3:80015263-80015282 Msa0960580:intron 35.0%
!! TTTGTGATGGTGAGATTTTG+CGG - chr6_3:80015435-80015454 None:intergenic 35.0%
CAAAAACCTCATCACCAATA+TGG + chr6_3:80015463-80015482 Msa0960580:intron 35.0%
TAATTGCCATCATAGTCTTC+TGG + chr6_3:80015537-80015556 Msa0960580:CDS 35.0%
TACTATCCAGAAGACTATGA+TGG - chr6_3:80015546-80015565 None:intergenic 35.0%
! AGACTATGATGTTGTTGTTG+GGG - chr6_3:80012223-80012242 None:intergenic 35.0%
GAAATCATTGTCTTTGTACC+AGG - chr6_3:80012270-80012289 None:intergenic 35.0%
TTCTATAGGTCCAAGAAAAG+TGG - chr6_3:80015792-80015811 None:intergenic 35.0%
! GCAGCTTTTATAAAAGTGGT+CGG + chr6_3:80015936-80015955 Msa0960580:CDS 35.0%
! TGATGATGATGAGTTACCAT+TGG - chr6_3:80016017-80016036 None:intergenic 35.0%
GAATCAGTACTACATCTTCT+GGG - chr6_3:80016055-80016074 None:intergenic 35.0%
AGAATCAGTACTACATCTTC+TGG - chr6_3:80016056-80016075 None:intergenic 35.0%
! CGATGATGGTAATTACGAAG+AGG - chr6_3:80012076-80012095 None:intergenic 40.0%
ATGAAATTTCACGCTTGAGG+GGG - chr6_3:80012117-80012136 None:intergenic 40.0%
CATGAAATTTCACGCTTGAG+GGG - chr6_3:80012118-80012137 None:intergenic 40.0%
GTTGTTTGTGAGGTTGAACT+CGG - chr6_3:80012159-80012178 None:intergenic 40.0%
ACTTTGACACCCTTTGATCA+AGG + chr6_3:80012299-80012318 Msa0960580:CDS 40.0%
TTCGATAGGTCCAAGAAAAG+TGG - chr6_3:80012336-80012355 None:intergenic 40.0%
CTTGGACCTATCGAATTCAA+AGG + chr6_3:80012341-80012360 Msa0960580:CDS 40.0%
! TATTCTGAAGAGACACGTCT+TGG + chr6_3:80012404-80012423 Msa0960580:CDS 40.0%
! ATTCTGAAGAGACACGTCTT+GGG + chr6_3:80012405-80012424 Msa0960580:CDS 40.0%
GAAGCTTCTATAAGACTGGT+CGG + chr6_3:80012480-80012499 Msa0960580:intron 40.0%
! CACCATTTTCTTTTAGTCCC+AGG + chr6_3:80012576-80012595 Msa0960580:CDS 40.0%
CTCCTGGGACTAAAAGAAAA+TGG - chr6_3:80012581-80012600 None:intergenic 40.0%
AGATCCGACTAACTCGTAAT+TGG - chr6_3:80013009-80013028 None:intergenic 40.0%
TTGTCTACTGACGTCTACAA+AGG + chr6_3:80013029-80013048 Msa0960580:intron 40.0%
!! GGTTACCGGTGTTATAAACA+CGG - chr6_3:80013120-80013139 None:intergenic 40.0%
CTCTCGCTCATAGATTTCTT+TGG - chr6_3:80013141-80013160 None:intergenic 40.0%
ACACATGTGGATAAGAGCAA+TGG + chr6_3:80013180-80013199 Msa0960580:intron 40.0%
CTGGAAAATCAAGTCAAACG+TGG + chr6_3:80013218-80013237 Msa0960580:intron 40.0%
TGGTATTTCCCAACGATAGT+AGG + chr6_3:80013238-80013257 Msa0960580:intron 40.0%
CTCTTGCTCCACTATTTATG+TGG - chr6_3:80013277-80013296 None:intergenic 40.0%
! CACATAAATAGTGGAGCAAG+AGG + chr6_3:80013275-80013294 Msa0960580:intron 40.0%
AGAAAAGATGATAGCTCGGT+CGG + chr6_3:80013378-80013397 Msa0960580:intron 40.0%
! AATGACCTCGGTTGGATTTT+TGG - chr6_3:80013665-80013684 None:intergenic 40.0%
!! GGTCATTTTCTTAGGTTACG+GGG + chr6_3:80013678-80013697 Msa0960580:intron 40.0%
GGCCTGCAAAAAAATTTCGT+AGG - chr6_3:80013826-80013845 None:intergenic 40.0%
GCCTATTTAAAAGTCTGGTC+TGG + chr6_3:80013906-80013925 Msa0960580:intron 40.0%
! GCCAGACCAGACTTTTAAAT+AGG - chr6_3:80013910-80013929 None:intergenic 40.0%
TTGAATGTCGTGATCTGGAT+TGG - chr6_3:80014480-80014499 None:intergenic 40.0%
TGCTTATAAATGTGACCGGA+GGG - chr6_3:80014693-80014712 None:intergenic 40.0%
TTGCTTATAAATGTGACCGG+AGG - chr6_3:80014692-80014711 None:intergenic 40.0%
TTGCTTATAAATGTGACCGG+AGG + chr6_3:80014692-80014711 Msa0960580:intron 40.0%
TGCTTATAAATGTGACCGGA+GGG + chr6_3:80014693-80014712 Msa0960580:intron 40.0%
AGACTTACAAAATGGGACCA+TGG + chr6_3:80014731-80014750 Msa0960580:intron 40.0%
!!! GGACCATGGTCTTTTTTGAA+AGG + chr6_3:80014745-80014764 Msa0960580:intron 40.0%
AAGTGTCTCAAAGGTCTCAA+AGG - chr6_3:80014889-80014908 None:intergenic 40.0%
TGGTCTACTTAATGCAAGTC+CGG + chr6_3:80014931-80014950 Msa0960580:intron 40.0%
TGATGAAAGACCAGAACACA+AGG - chr6_3:80014993-80015012 None:intergenic 40.0%
!!! GTATGGTCTGTTGATTTTCG+AGG - chr6_3:80015351-80015370 None:intergenic 40.0%
AATTACGAAGAGGACTACAG+CGG - chr6_3:80015522-80015541 None:intergenic 40.0%
CTATGATGGCAATTACGAAG+AGG - chr6_3:80015532-80015551 None:intergenic 40.0%
ACGTGAAATTTCACGCTTGA+GGG - chr6_3:80015575-80015594 None:intergenic 40.0%
TACGTGAAATTTCACGCTTG+AGG - chr6_3:80015576-80015595 None:intergenic 40.0%
AGTTTGTCACCCTTTGATCA+AGG + chr6_3:80015755-80015774 Msa0960580:CDS 40.0%
GGAAATGCTACGATCAAACT+TGG + chr6_3:80015818-80015837 Msa0960580:CDS 40.0%
CCATTGGAAGAAGAAACCAA+AGG - chr6_3:80016001-80016020 None:intergenic 40.0%
! CCTTTGGTTTCTTCTTCCAA+TGG + chr6_3:80015998-80016017 Msa0960580:CDS 40.0%
! CGATGATGGTAATTACGAAG+AGG - chr6_3:80012076-80012095 None:intergenic 40.0%
ATGAAATTTCACGCTTGAGG+GGG - chr6_3:80012117-80012136 None:intergenic 40.0%
CATGAAATTTCACGCTTGAG+GGG - chr6_3:80012118-80012137 None:intergenic 40.0%
GTTGTTTGTGAGGTTGAACT+CGG - chr6_3:80012159-80012178 None:intergenic 40.0%
ACTTTGACACCCTTTGATCA+AGG + chr6_3:80012299-80012318 Msa0960580:CDS 40.0%
TTCGATAGGTCCAAGAAAAG+TGG - chr6_3:80012336-80012355 None:intergenic 40.0%
CTTGGACCTATCGAATTCAA+AGG + chr6_3:80012341-80012360 Msa0960580:CDS 40.0%
! TATTCTGAAGAGACACGTCT+TGG + chr6_3:80012404-80012423 Msa0960580:CDS 40.0%
! ATTCTGAAGAGACACGTCTT+GGG + chr6_3:80012405-80012424 Msa0960580:CDS 40.0%
GAAGCTTCTATAAGACTGGT+CGG + chr6_3:80012480-80012499 Msa0960580:intron 40.0%
! CACCATTTTCTTTTAGTCCC+AGG + chr6_3:80012576-80012595 Msa0960580:CDS 40.0%
CTCCTGGGACTAAAAGAAAA+TGG - chr6_3:80012581-80012600 None:intergenic 40.0%
AGATCCGACTAACTCGTAAT+TGG - chr6_3:80013009-80013028 None:intergenic 40.0%
TTGTCTACTGACGTCTACAA+AGG + chr6_3:80013029-80013048 Msa0960580:intron 40.0%
!! GGTTACCGGTGTTATAAACA+CGG - chr6_3:80013120-80013139 None:intergenic 40.0%
CTCTCGCTCATAGATTTCTT+TGG - chr6_3:80013141-80013160 None:intergenic 40.0%
ACACATGTGGATAAGAGCAA+TGG + chr6_3:80013180-80013199 Msa0960580:intron 40.0%
CTGGAAAATCAAGTCAAACG+TGG + chr6_3:80013218-80013237 Msa0960580:intron 40.0%
TGGTATTTCCCAACGATAGT+AGG + chr6_3:80013238-80013257 Msa0960580:intron 40.0%
CTCTTGCTCCACTATTTATG+TGG - chr6_3:80013277-80013296 None:intergenic 40.0%
! CACATAAATAGTGGAGCAAG+AGG + chr6_3:80013275-80013294 Msa0960580:intron 40.0%
AGAAAAGATGATAGCTCGGT+CGG + chr6_3:80013378-80013397 Msa0960580:intron 40.0%
! AATGACCTCGGTTGGATTTT+TGG - chr6_3:80013665-80013684 None:intergenic 40.0%
!! GGTCATTTTCTTAGGTTACG+GGG + chr6_3:80013678-80013697 Msa0960580:intron 40.0%
GGCCTGCAAAAAAATTTCGT+AGG - chr6_3:80013826-80013845 None:intergenic 40.0%
GCCTATTTAAAAGTCTGGTC+TGG + chr6_3:80013906-80013925 Msa0960580:intron 40.0%
! GCCAGACCAGACTTTTAAAT+AGG - chr6_3:80013910-80013929 None:intergenic 40.0%
TTGAATGTCGTGATCTGGAT+TGG - chr6_3:80014480-80014499 None:intergenic 40.0%
TGCTTATAAATGTGACCGGA+GGG - chr6_3:80014693-80014712 None:intergenic 40.0%
TTGCTTATAAATGTGACCGG+AGG - chr6_3:80014692-80014711 None:intergenic 40.0%
TTGCTTATAAATGTGACCGG+AGG + chr6_3:80014692-80014711 Msa0960580:intron 40.0%
TGCTTATAAATGTGACCGGA+GGG + chr6_3:80014693-80014712 Msa0960580:intron 40.0%
AGACTTACAAAATGGGACCA+TGG + chr6_3:80014731-80014750 Msa0960580:intron 40.0%
!!! GGACCATGGTCTTTTTTGAA+AGG + chr6_3:80014745-80014764 Msa0960580:intron 40.0%
AAGTGTCTCAAAGGTCTCAA+AGG - chr6_3:80014889-80014908 None:intergenic 40.0%
TGGTCTACTTAATGCAAGTC+CGG + chr6_3:80014931-80014950 Msa0960580:intron 40.0%
TGATGAAAGACCAGAACACA+AGG - chr6_3:80014993-80015012 None:intergenic 40.0%
!!! GTATGGTCTGTTGATTTTCG+AGG - chr6_3:80015351-80015370 None:intergenic 40.0%
AATTACGAAGAGGACTACAG+CGG - chr6_3:80015522-80015541 None:intergenic 40.0%
CTATGATGGCAATTACGAAG+AGG - chr6_3:80015532-80015551 None:intergenic 40.0%
ACGTGAAATTTCACGCTTGA+GGG - chr6_3:80015575-80015594 None:intergenic 40.0%
TACGTGAAATTTCACGCTTG+AGG - chr6_3:80015576-80015595 None:intergenic 40.0%
AGTTTGTCACCCTTTGATCA+AGG + chr6_3:80015755-80015774 Msa0960580:CDS 40.0%
GGAAATGCTACGATCAAACT+TGG + chr6_3:80015818-80015837 Msa0960580:CDS 40.0%
CCATTGGAAGAAGAAACCAA+AGG - chr6_3:80016001-80016020 None:intergenic 40.0%
! CCTTTGGTTTCTTCTTCCAA+TGG + chr6_3:80015998-80016017 Msa0960580:CDS 40.0%
GAAGAATCAAGGCCATTGCT+TGG + chr6_3:80012249-80012268 Msa0960580:intron 45.0%
AGAAGGCAAGAACATACAGC+AGG - chr6_3:80012742-80012761 None:intergenic 45.0%
! GAAGACTTTGGCTCCATCAA+AGG - chr6_3:80012811-80012830 None:intergenic 45.0%
GCAGCCAATTACGAGTTAGT+CGG + chr6_3:80013002-80013021 Msa0960580:intron 45.0%
GTGCTCCGTGTTTATAACAC+CGG + chr6_3:80013112-80013131 Msa0960580:intron 45.0%
CTAAGAGAGTTGCACACATG+TGG + chr6_3:80013167-80013186 Msa0960580:intron 45.0%
GGGTGAATCCTACTATCGTT+GGG - chr6_3:80013249-80013268 None:intergenic 45.0%
TGGGTGAATCCTACTATCGT+TGG - chr6_3:80013250-80013269 None:intergenic 45.0%
! AGGAGATAACCCAAGTTGAG+AGG + chr6_3:80013402-80013421 Msa0960580:intron 45.0%
! GGAGATAACCCAAGTTGAGA+GGG + chr6_3:80013403-80013422 Msa0960580:intron 45.0%
! GAGATAACCCAAGTTGAGAG+GGG + chr6_3:80013404-80013423 Msa0960580:intron 45.0%
!! CTCGGTTGGATTTTTGGAAG+GGG - chr6_3:80013659-80013678 None:intergenic 45.0%
!! CCTCGGTTGGATTTTTGGAA+GGG - chr6_3:80013660-80013679 None:intergenic 45.0%
!! ACCTCGGTTGGATTTTTGGA+AGG - chr6_3:80013661-80013680 None:intergenic 45.0%
CCTAAGAAAATGACCTCGGT+TGG - chr6_3:80013673-80013692 None:intergenic 45.0%
!! CCAACCGAGGTCATTTTCTT+AGG + chr6_3:80013670-80013689 Msa0960580:intron 45.0%
ATCATCCATTGACCCTATCG+AGG + chr6_3:80013708-80013727 Msa0960580:intron 45.0%
TCATCCATTGACCCTATCGA+GGG + chr6_3:80013709-80013728 Msa0960580:intron 45.0%
ACCCTATCGAGGGCAAAAAA+GGG + chr6_3:80013719-80013738 Msa0960580:intron 45.0%
! AATAAGGGTGCGAATATGCC+AGG + chr6_3:80013769-80013788 Msa0960580:intron 45.0%
AAATTTCGTAGGTCAGGCTC+AGG - chr6_3:80013815-80013834 None:intergenic 45.0%
GCTTACGAAGACCATATGTC+AGG - chr6_3:80013853-80013872 None:intergenic 45.0%
TTATCCACGACAATCCTCGT+GGG - chr6_3:80014054-80014073 None:intergenic 45.0%
GTTAAGCCTGTGAAGACTAC+CGG + chr6_3:80014300-80014319 Msa0960580:intron 45.0%
CTATAACCGGTAGTCTTCAC+AGG - chr6_3:80014309-80014328 None:intergenic 45.0%
TGAATACCACATACTCCCTC+CGG - chr6_3:80014711-80014730 None:intergenic 45.0%
ACCTCATCACCAATATGGGT+TGG + chr6_3:80015468-80015487 Msa0960580:intron 45.0%
!! ACCAACCCATATTGGTGATG+AGG - chr6_3:80015472-80015491 None:intergenic 45.0%
GAACTCAGTGAGAGTTGCAT+CGG - chr6_3:80015600-80015619 None:intergenic 45.0%
! TATTCTGAAGAGACGCGTCT+TGG + chr6_3:80015860-80015879 Msa0960580:CDS 45.0%
! ATTCTGAAGAGACGCGTCTT+GGG + chr6_3:80015861-80015880 Msa0960580:CDS 45.0%
AAACGACCACACTGAACAAC+GGG - chr6_3:80015971-80015990 None:intergenic 45.0%
CAAACGACCACACTGAACAA+CGG - chr6_3:80015972-80015991 None:intergenic 45.0%
TGGTCGTTTGAGTGTTCCTT+TGG + chr6_3:80015982-80016001 Msa0960580:CDS 45.0%
GAAGAATCAAGGCCATTGCT+TGG + chr6_3:80012249-80012268 Msa0960580:intron 45.0%
AGAAGGCAAGAACATACAGC+AGG - chr6_3:80012742-80012761 None:intergenic 45.0%
! GAAGACTTTGGCTCCATCAA+AGG - chr6_3:80012811-80012830 None:intergenic 45.0%
GCAGCCAATTACGAGTTAGT+CGG + chr6_3:80013002-80013021 Msa0960580:intron 45.0%
GTGCTCCGTGTTTATAACAC+CGG + chr6_3:80013112-80013131 Msa0960580:intron 45.0%
CTAAGAGAGTTGCACACATG+TGG + chr6_3:80013167-80013186 Msa0960580:intron 45.0%
GGGTGAATCCTACTATCGTT+GGG - chr6_3:80013249-80013268 None:intergenic 45.0%
TGGGTGAATCCTACTATCGT+TGG - chr6_3:80013250-80013269 None:intergenic 45.0%
! AGGAGATAACCCAAGTTGAG+AGG + chr6_3:80013402-80013421 Msa0960580:intron 45.0%
! GGAGATAACCCAAGTTGAGA+GGG + chr6_3:80013403-80013422 Msa0960580:intron 45.0%
! GAGATAACCCAAGTTGAGAG+GGG + chr6_3:80013404-80013423 Msa0960580:intron 45.0%
!! CTCGGTTGGATTTTTGGAAG+GGG - chr6_3:80013659-80013678 None:intergenic 45.0%
!! CCTCGGTTGGATTTTTGGAA+GGG - chr6_3:80013660-80013679 None:intergenic 45.0%
!! ACCTCGGTTGGATTTTTGGA+AGG - chr6_3:80013661-80013680 None:intergenic 45.0%
CCTAAGAAAATGACCTCGGT+TGG - chr6_3:80013673-80013692 None:intergenic 45.0%
!! CCAACCGAGGTCATTTTCTT+AGG + chr6_3:80013670-80013689 Msa0960580:intron 45.0%
ATCATCCATTGACCCTATCG+AGG + chr6_3:80013708-80013727 Msa0960580:intron 45.0%
TCATCCATTGACCCTATCGA+GGG + chr6_3:80013709-80013728 Msa0960580:intron 45.0%
ACCCTATCGAGGGCAAAAAA+GGG + chr6_3:80013719-80013738 Msa0960580:intron 45.0%
! AATAAGGGTGCGAATATGCC+AGG + chr6_3:80013769-80013788 Msa0960580:intron 45.0%
AAATTTCGTAGGTCAGGCTC+AGG - chr6_3:80013815-80013834 None:intergenic 45.0%
GCTTACGAAGACCATATGTC+AGG - chr6_3:80013853-80013872 None:intergenic 45.0%
TTATCCACGACAATCCTCGT+GGG - chr6_3:80014054-80014073 None:intergenic 45.0%
GTTAAGCCTGTGAAGACTAC+CGG + chr6_3:80014300-80014319 Msa0960580:intron 45.0%
CTATAACCGGTAGTCTTCAC+AGG - chr6_3:80014309-80014328 None:intergenic 45.0%
TGAATACCACATACTCCCTC+CGG - chr6_3:80014711-80014730 None:intergenic 45.0%
ACCTCATCACCAATATGGGT+TGG + chr6_3:80015468-80015487 Msa0960580:intron 45.0%
!! ACCAACCCATATTGGTGATG+AGG - chr6_3:80015472-80015491 None:intergenic 45.0%
GAACTCAGTGAGAGTTGCAT+CGG - chr6_3:80015600-80015619 None:intergenic 45.0%
! TATTCTGAAGAGACGCGTCT+TGG + chr6_3:80015860-80015879 Msa0960580:CDS 45.0%
! ATTCTGAAGAGACGCGTCTT+GGG + chr6_3:80015861-80015880 Msa0960580:CDS 45.0%
AAACGACCACACTGAACAAC+GGG - chr6_3:80015971-80015990 None:intergenic 45.0%
CAAACGACCACACTGAACAA+CGG - chr6_3:80015972-80015991 None:intergenic 45.0%
TGGTCGTTTGAGTGTTCCTT+TGG + chr6_3:80015982-80016001 Msa0960580:CDS 45.0%
! GAACTCGGTGAGAGTTGCAT+CGG - chr6_3:80012144-80012163 None:intergenic 50.0%
! GACTGGTCGGTTTAATCCAC+CGG + chr6_3:80012493-80012512 Msa0960580:CDS 50.0%
AAACGACGACACTGCAGAAC+CGG - chr6_3:80012515-80012534 None:intergenic 50.0%
TCACCACTGCTACATCTCCT+GGG - chr6_3:80012596-80012615 None:intergenic 50.0%
ATCACCACTGCTACATCTCC+TGG - chr6_3:80012597-80012616 None:intergenic 50.0%
AAGATGATAGCTCGGTCGGA+AGG + chr6_3:80013382-80013401 Msa0960580:intron 50.0%
GAGTTCTCCCCTCTCAACTT+GGG - chr6_3:80013414-80013433 None:intergenic 50.0%
GTTGTGCGATCACTGATCGT+AGG + chr6_3:80013576-80013595 Msa0960580:intron 50.0%
CCCTTCCAAAAATCCAACCG+AGG + chr6_3:80013657-80013676 Msa0960580:intron 50.0%
TTTGCCCTCGATAGGGTCAA+TGG - chr6_3:80013716-80013735 None:intergenic 50.0%
GACCCTATCGAGGGCAAAAA+AGG + chr6_3:80013718-80013737 Msa0960580:intron 50.0%
!!! GCCCTTTTTTGCCCTCGATA+GGG - chr6_3:80013723-80013742 None:intergenic 50.0%
!!! TGCCCTTTTTTGCCCTCGAT+AGG - chr6_3:80013724-80013743 None:intergenic 50.0%
GAAGACCATATGTCAGGCTC+AGG - chr6_3:80013847-80013866 None:intergenic 50.0%
!! AGTAGAGTATCGATCCCACG+AGG + chr6_3:80014037-80014056 Msa0960580:intron 50.0%
CTTATCCACGACAATCCTCG+TGG - chr6_3:80014055-80014074 None:intergenic 50.0%
! AATGTGACCGGAGGGAGTAT+TGG - chr6_3:80014701-80014720 None:intergenic 50.0%
GAAGAATCACTGCGATTGCC+TGG + chr6_3:80015705-80015724 Msa0960580:CDS 50.0%
! GAACTCGGTGAGAGTTGCAT+CGG - chr6_3:80012144-80012163 None:intergenic 50.0%
! GACTGGTCGGTTTAATCCAC+CGG + chr6_3:80012493-80012512 Msa0960580:CDS 50.0%
AAACGACGACACTGCAGAAC+CGG - chr6_3:80012515-80012534 None:intergenic 50.0%
TCACCACTGCTACATCTCCT+GGG - chr6_3:80012596-80012615 None:intergenic 50.0%
ATCACCACTGCTACATCTCC+TGG - chr6_3:80012597-80012616 None:intergenic 50.0%
AAGATGATAGCTCGGTCGGA+AGG + chr6_3:80013382-80013401 Msa0960580:intron 50.0%
GAGTTCTCCCCTCTCAACTT+GGG - chr6_3:80013414-80013433 None:intergenic 50.0%
GTTGTGCGATCACTGATCGT+AGG + chr6_3:80013576-80013595 Msa0960580:intron 50.0%
CCCTTCCAAAAATCCAACCG+AGG + chr6_3:80013657-80013676 Msa0960580:intron 50.0%
TTTGCCCTCGATAGGGTCAA+TGG - chr6_3:80013716-80013735 None:intergenic 50.0%
GACCCTATCGAGGGCAAAAA+AGG + chr6_3:80013718-80013737 Msa0960580:intron 50.0%
!!! GCCCTTTTTTGCCCTCGATA+GGG - chr6_3:80013723-80013742 None:intergenic 50.0%
!!! TGCCCTTTTTTGCCCTCGAT+AGG - chr6_3:80013724-80013743 None:intergenic 50.0%
GAAGACCATATGTCAGGCTC+AGG - chr6_3:80013847-80013866 None:intergenic 50.0%
!! AGTAGAGTATCGATCCCACG+AGG + chr6_3:80014037-80014056 Msa0960580:intron 50.0%
CTTATCCACGACAATCCTCG+TGG - chr6_3:80014055-80014074 None:intergenic 50.0%
! AATGTGACCGGAGGGAGTAT+TGG - chr6_3:80014701-80014720 None:intergenic 50.0%
GAAGAATCACTGCGATTGCC+TGG + chr6_3:80015705-80015724 Msa0960580:CDS 50.0%
AGTCCCAGGAGATGTAGCAG+TGG + chr6_3:80012590-80012609 Msa0960580:CDS 55.0%
CGAGTTCTCCCCTCTCAACT+TGG - chr6_3:80013415-80013434 None:intergenic 55.0%
TATCAAAGCCTGGCCTGACC+TGG - chr6_3:80013790-80013809 None:intergenic 55.0%
! AGGTCAGGCCAGGCTTTGAT+AGG + chr6_3:80013789-80013808 Msa0960580:intron 55.0%
! ATGTGACCGGAGGGAGTATG+TGG + chr6_3:80014702-80014721 Msa0960580:intron 55.0%
AAGCCACCCGTTGTTCAGTG+TGG + chr6_3:80015962-80015981 Msa0960580:CDS 55.0%
AGTCCCAGGAGATGTAGCAG+TGG + chr6_3:80012590-80012609 Msa0960580:CDS 55.0%
CGAGTTCTCCCCTCTCAACT+TGG - chr6_3:80013415-80013434 None:intergenic 55.0%
TATCAAAGCCTGGCCTGACC+TGG - chr6_3:80013790-80013809 None:intergenic 55.0%
! AGGTCAGGCCAGGCTTTGAT+AGG + chr6_3:80013789-80013808 Msa0960580:intron 55.0%
! ATGTGACCGGAGGGAGTATG+TGG + chr6_3:80014702-80014721 Msa0960580:intron 55.0%
AAGCCACCCGTTGTTCAGTG+TGG + chr6_3:80015962-80015981 Msa0960580:CDS 55.0%
GGGTGCGAATATGCCAGGTC+AGG + chr6_3:80013774-80013793 Msa0960580:intron 60.0%
CGAATATGCCAGGTCAGGCC+AGG + chr6_3:80013779-80013798 Msa0960580:intron 60.0%
GGCTCAGGCCTATCAAAGCC+TGG - chr6_3:80013800-80013819 None:intergenic 60.0%
GCAGGCCTGAGCCTGACATA+TGG + chr6_3:80013839-80013858 Msa0960580:intron 60.0%
CGATCCCACGAGGATTGTCG+TGG + chr6_3:80014047-80014066 Msa0960580:intron 60.0%
GCGTGCGCACCAACCCATAT+TGG - chr6_3:80015480-80015499 None:intergenic 60.0%
CGACCACACTGAACAACGGG+TGG - chr6_3:80015968-80015987 None:intergenic 60.0%
GGGTGCGAATATGCCAGGTC+AGG + chr6_3:80013774-80013793 Msa0960580:intron 60.0%
CGAATATGCCAGGTCAGGCC+AGG + chr6_3:80013779-80013798 Msa0960580:intron 60.0%
GGCTCAGGCCTATCAAAGCC+TGG - chr6_3:80013800-80013819 None:intergenic 60.0%
GCAGGCCTGAGCCTGACATA+TGG + chr6_3:80013839-80013858 Msa0960580:intron 60.0%
CGATCCCACGAGGATTGTCG+TGG + chr6_3:80014047-80014066 Msa0960580:intron 60.0%
GCGTGCGCACCAACCCATAT+TGG - chr6_3:80015480-80015499 None:intergenic 60.0%
CGACCACACTGAACAACGGG+TGG - chr6_3:80015968-80015987 None:intergenic 60.0%
CGACGACACTGCAGAACCGG+TGG - chr6_3:80012512-80012531 None:intergenic 65.0%
CGACGACACTGCAGAACCGG+TGG - chr6_3:80012512-80012531 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 80012026 80016108 80012026 ID=Msa0960580;Name=Msa0960580
chr6_3 mRNA 80012026 80016108 80012026 ID=Msa0960580-mRNA-1;Parent=Msa0960580;Name=Msa0960580-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|0|0|1|0|0|4|0|384
chr6_3 exon 80012026 80012238 80012026 ID=Msa0960580-mRNA-1:exon:14421;Parent=Msa0960580-mRNA-1
chr6_3 exon 80012260 80012474 80012260 ID=Msa0960580-mRNA-1:exon:14422;Parent=Msa0960580-mRNA-1
chr6_3 exon 80012484 80012629 80012484 ID=Msa0960580-mRNA-1:exon:14423;Parent=Msa0960580-mRNA-1
chr6_3 exon 80015528 80016108 80015528 ID=Msa0960580-mRNA-1:exon:14424;Parent=Msa0960580-mRNA-1
chr6_3 CDS 80012026 80012238 80012026 ID=Msa0960580-mRNA-1:cds;Parent=Msa0960580-mRNA-1
chr6_3 CDS 80012260 80012474 80012260 ID=Msa0960580-mRNA-1:cds;Parent=Msa0960580-mRNA-1
chr6_3 CDS 80012484 80012629 80012484 ID=Msa0960580-mRNA-1:cds;Parent=Msa0960580-mRNA-1
chr6_3 CDS 80015528 80016108 80015528 ID=Msa0960580-mRNA-1:cds;Parent=Msa0960580-mRNA-1
Gene Sequence

>Msa0960580

ATGGGTTGGGTCGCACGCATTTGTTGCACATTATGTTGTCTTGTAGTCCTCTTCGTAATTACCATCATCGTCTTCTGGATAATAGTCTCCCCCTCAAGCGTGAAATTTCATGTAACCGATGCAACTCTCACCGAGTTCAACCTCACAAACAACAACTTATATTACAATTTCAAAGTGAATGTCACAGCAAGAAACCCCAACAACAACATCATAGCCATTGCTTGGTACAAAGACAATGATTTCAGTCATATAACTTTGACACCCTTTGATCAAGGACACAAAAATACCACTTTTCTTGGACCTATCGAATTCAAAGGAAATTCTATCATCAAACTTGGACGTCAACAACTTAACGAGTATTCTGAAGAGACACGTCTTGGGATTTATAAAGATTTGGCTGTTGATTTTGATATTCGAATTAGAGCTAACTTCTATAAGACTGGTCGGTTTAATCCACCGGTTCTGCAGTGTCGTCGTTTGAGAGTTCCTTTGATTTCTTCTTCCAATAGTAACTCATCATCACCATTTTCTTTTAGTCCCAGGAGATGTAGCAGTGGTGATTTCTTTACGGACCTCCTCTTCGTAATTGCCATCATAGTCTTCTGGATAGTAATCTCTCCCTCAAGCGTGAAATTTCACGTAACCGATGCAACTCTCACTGAGTTCAACCTCACAAACAACAACTTATATTACAATTTCAAAGTGAATATCACAGCAAGAAACCCCAACAACAACATCATAGTCTATTATCGAAGAATCACTGCGATTGCCTGGTACAAAGACAATGATTTCAGTCGTGTGAGTTTGTCACCCTTTGATCAAGGACATAAGAATACCACTTTTCTTGGACCTATAGAATTTAAAGGAAATGCTACGATCAAACTTGGACGTCAACAACTTAACGAGTATTCTGAAGAGACGCGTCTTGGGATTTATAACGATTTGGCTGTTGATTTTGATTTTCGAATTAGAGCTAAGTTTGGCAGCTTTTATAAAAGTGGTCGGTTTAAGCCACCCGTTGTTCAGTGTGGTCGTTTGAGTGTTCCTTTGGTTTCTTCTTCCAATGGTAACTCATCATCATCAACATTTTCTTTTAGTCCCAGAAGATGTAGTACTGATTCTTTCTTTATAGACCGTGATATAAATAAATATTGA

Protein sequence

>Msa0960580

MGWVARICCTLCCLVVLFVITIIVFWIIVSPSSVKFHVTDATLTEFNLTNNNLYYNFKVNVTARNPNNNIIAIAWYKDNDFSHITLTPFDQGHKNTTFLGPIEFKGNSIIKLGRQQLNEYSEETRLGIYKDLAVDFDIRIRANFYKTGRFNPPVLQCRRLRVPLISSSNSNSSSPFSFSPRRCSSGDFFTDLLFVIAIIVFWIVISPSSVKFHVTDATLTEFNLTNNNLYYNFKVNITARNPNNNIIVYYRRITAIAWYKDNDFSRVSLSPFDQGHKNTTFLGPIEFKGNATIKLGRQQLNEYSEETRLGIYNDLAVDFDFRIRAKFGSFYKSGRFKPPVVQCGRLSVPLVSSSNGNSSSSTFSFSPRRCSTDSFFIDRDINKY*