Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0560080 | XP_003608417.1 | 98.815 | 1266 | 15 | 0 | 1 | 1266 | 1 | 1266 | 0.0 | 2573 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0560080 | sp|Q9FIZ7|OPLA_ARATH | 81.181 | 1270 | 231 | 2 | 1 | 1266 | 1 | 1266 | 0.0 | 2154 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0560080 | G7JV66 | 98.815 | 1266 | 15 | 0 | 1 | 1266 | 1 | 1266 | 0.0 | 2573 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0007480 | Msa0560080 | 0.802381 | 5.764531e-49 | -8.615850e-47 |
Msa0046100 | Msa0560080 | 0.801857 | 7.385759e-49 | -8.615850e-47 |
Msa0097840 | Msa0560080 | 0.806774 | 6.987328e-50 | -8.615850e-47 |
Msa0110970 | Msa0560080 | 0.814300 | 1.652702e-51 | -8.615850e-47 |
Msa0140960 | Msa0560080 | 0.829016 | 6.514669e-55 | -8.615850e-47 |
Msa0146260 | Msa0560080 | 0.809721 | 1.644608e-50 | -8.615850e-47 |
Msa0193890 | Msa0560080 | 0.809672 | 1.685080e-50 | -8.615850e-47 |
Msa0223690 | Msa0560080 | 0.803592 | 3.239320e-49 | -8.615850e-47 |
Msa0378980 | Msa0560080 | 0.814972 | 1.173157e-51 | -8.615850e-47 |
Msa0388960 | Msa0560080 | 0.804886 | 1.741901e-49 | -8.615850e-47 |
Msa0423900 | Msa0560080 | 0.814765 | 1.304352e-51 | -8.615850e-47 |
Msa0431770 | Msa0560080 | 0.807957 | 3.920507e-50 | -8.615850e-47 |
Msa0480980 | Msa0560080 | 0.802179 | 6.344104e-49 | -8.615850e-47 |
Msa0515640 | Msa0560080 | 0.806121 | 9.594589e-50 | -8.615850e-47 |
Msa0560080 | Msa0574890 | 0.828770 | 7.474629e-55 | -8.615850e-47 |
Msa0560080 | Msa0576880 | 0.805079 | 1.587082e-49 | -8.615850e-47 |
Msa0560080 | Msa0581760 | 0.801495 | 8.765026e-49 | -8.615850e-47 |
Msa0560080 | Msa0638610 | 0.849994 | 2.261673e-60 | -8.615850e-47 |
Msa0560080 | Msa0645170 | 0.813586 | 2.374292e-51 | -8.615850e-47 |
Msa0560080 | Msa0701280 | 0.801257 | 9.806705e-49 | -8.615850e-47 |
Msa0560080 | Msa0702350 | 0.821510 | 3.885856e-53 | -8.615850e-47 |
Msa0560080 | Msa0702570 | 0.830375 | 3.043235e-55 | -8.615850e-47 |
Msa0560080 | Msa0702590 | 0.808427 | 3.114193e-50 | -8.615850e-47 |
Msa0560080 | Msa0702680 | 0.817341 | 3.468395e-52 | -8.615850e-47 |
Msa0560080 | Msa0703050 | 0.801291 | 9.651622e-49 | -8.615850e-47 |
Msa0560080 | Msa0762210 | 0.848617 | 5.468676e-60 | -8.615850e-47 |
Msa0560080 | Msa0878290 | 0.802056 | 6.723388e-49 | -8.615850e-47 |
Msa0560080 | Msa0908050 | 0.815852 | 7.476599e-52 | -8.615850e-47 |
Msa0560080 | Msa0930780 | 0.829704 | 4.435174e-55 | -8.615850e-47 |
Msa0560080 | Msa1004420 | 0.839752 | 1.313068e-57 | -8.615850e-47 |
Msa0560080 | Msa1063950 | 0.810249 | 1.266399e-50 | -8.615850e-47 |
Msa0560080 | Msa1175330 | 0.802136 | 6.474984e-49 | -8.615850e-47 |
Msa0560080 | Msa1199220 | 0.800007 | 1.763530e-48 | -8.615850e-47 |
Msa0560080 | Msa1224830 | 0.836059 | 1.167944e-56 | -8.615850e-47 |
Msa0560080 | Msa1224840 | 0.806662 | 7.378824e-50 | -8.615850e-47 |
Msa0560080 | Msa1228290 | 0.801687 | 8.005631e-49 | -8.615850e-47 |
Msa0560080 | Msa1228890 | 0.837755 | 4.311681e-57 | -8.615850e-47 |
Msa0560080 | Msa1236100 | 0.803881 | 2.820449e-49 | -8.615850e-47 |
Msa0560080 | Msa1264020 | 0.801567 | 8.472526e-49 | -8.615850e-47 |
Msa0560080 | Msa1283990 | 0.801599 | 8.346697e-49 | -8.615850e-47 |
Msa0560080 | Msa1313150 | 0.803292 | 3.737000e-49 | -8.615850e-47 |
Msa0560080 | Msa1356570 | 0.802369 | 5.795604e-49 | -8.615850e-47 |
Msa0560080 | Msa1374040 | 0.807488 | 4.931484e-50 | -8.615850e-47 |
Msa0560080 | Msa1404730 | 0.813416 | 2.588873e-51 | -8.615850e-47 |
Msa0560080 | Msa1411700 | 0.804727 | 1.880432e-49 | -8.615850e-47 |
Msa0560080 | Msa1423880 | 0.806600 | 7.603537e-50 | -8.615850e-47 |
Msa0560080 | Msa1459180 | 0.807588 | 4.697551e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0560080 | MtrunA17_Chr4g0049981 | 98.815 | 1266 | 15 | 0 | 1 | 1266 | 1 | 1266 | 0.0 | 2573 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0560080 | AT5G37830.1 | 81.181 | 1270 | 231 | 2 | 1 | 1266 | 1 | 1266 | 0.0 | 2154 |
Find 331 sgRNAs with CRISPR-Local
Find 402 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GAGCCTTATGCTGCGGTTTA+TGG | 0.137030 | 4_1:+59330408 | Msa0560080:CDS |
ATTTCAGTCAACTGCCTTAT+TGG | 0.141151 | 4_1:-59330213 | None:intergenic |
GCTAAGCCCCTCTTCAAATT+TGG | 0.165612 | 4_1:-59329572 | None:intergenic |
TGTTGTATTTACTGCATTTC+AGG | 0.182602 | 4_1:+59332078 | Msa0560080:CDS |
TCCAATATGGACTTTGAAAA+TGG | 0.184985 | 4_1:-59331404 | None:intergenic |
TTATAGTAGCCTTCAATTAT+AGG | 0.193665 | 4_1:-59330768 | None:intergenic |
GTGCAGAAGTTTATGGTAAT+TGG | 0.196069 | 4_1:+59331864 | Msa0560080:CDS |
GCTTCTTCGCCAATTGTTAA+AGG | 0.201288 | 4_1:+59329253 | Msa0560080:CDS |
GCCATTGATTGGATTTGATA+TGG | 0.207754 | 4_1:+59329735 | Msa0560080:CDS |
GATTATTTCCCATCCATATT+TGG | 0.208240 | 4_1:+59330021 | Msa0560080:CDS |
GATGATGATGCTTAAATTAT+TGG | 0.213450 | 4_1:-59328421 | None:intergenic |
GAATTATGGCACCAGCAATT+TGG | 0.224339 | 4_1:-59329816 | None:intergenic |
CCAATTGTTAAAGGTATTTC+GGG | 0.228167 | 4_1:+59329262 | Msa0560080:CDS |
GTTTCCATATTTGGTTATAA+TGG | 0.234888 | 4_1:-59330925 | None:intergenic |
GCCAATTGTTAAAGGTATTT+CGG | 0.235388 | 4_1:+59329261 | Msa0560080:CDS |
GAAAGAATGCTGACGGTAAC+TGG | 0.235550 | 4_1:-59332379 | None:intergenic |
AACAAGCTTAAACGCCTTAA+TGG | 0.241080 | 4_1:-59331438 | None:intergenic |
AGTGTAAGGTTTCTTTCTTT+TGG | 0.250515 | 4_1:+59332582 | Msa0560080:exon |
GCTGCAGCTGTTACGGCTTC+TGG | 0.264309 | 4_1:-59331893 | None:intergenic |
GGGTGTGCTCCAACTGATTC+TGG | 0.269138 | 4_1:-59329922 | None:intergenic |
CATGCACTTGCTTGCTTTGG+AGG | 0.272406 | 4_1:+59330258 | Msa0560080:CDS |
TTCGTTGGCAACTCAATTAC+TGG | 0.276459 | 4_1:+59331204 | Msa0560080:CDS |
GACAGGTAGTCTTTAATAAC+TGG | 0.286061 | 4_1:-59329538 | None:intergenic |
ACATTTGGAGATGACACTTT+TGG | 0.286864 | 4_1:+59332136 | Msa0560080:CDS |
AATTCTGTTGAGGTGCTTCC+AGG | 0.294127 | 4_1:+59332511 | Msa0560080:CDS |
GTCCTCATTTGGGCCAAATA+TGG | 0.294133 | 4_1:-59330034 | None:intergenic |
GGTTATAATGGCTCTACAAT+TGG | 0.294357 | 4_1:-59330913 | None:intergenic |
AGAGCCATTATAACCAAATA+TGG | 0.302708 | 4_1:+59330921 | Msa0560080:CDS |
GCGTTTAAGCTTGTTGAAAA+AGG | 0.303112 | 4_1:+59331446 | Msa0560080:CDS |
GGCAGCTCCTTCCTCCAATA+TGG | 0.308794 | 4_1:-59331417 | None:intergenic |
GGAAGGGATACGGAGGATTC+TGG | 0.316368 | 4_1:+59328937 | Msa0560080:CDS |
GAGGATTCTGGAAGAGTTTA+CGG | 0.320298 | 4_1:+59328949 | Msa0560080:CDS |
TTTGAATGAAGGAGATGTTT+TGG | 0.321268 | 4_1:+59331235 | Msa0560080:CDS |
TTACCGTTCATGACGATTGC+TGG | 0.323580 | 4_1:-59330870 | None:intergenic |
TCAAGAGGCCGGTCCTCATT+TGG | 0.327091 | 4_1:-59330045 | None:intergenic |
GGAGAAAGAAATGAGCCTTC+TGG | 0.329113 | 4_1:-59331998 | None:intergenic |
GAAAATGGAGGCATGCTTCC+AGG | 0.332136 | 4_1:-59331389 | None:intergenic |
CTTGCTTGCTTTGGAGGTGC+TGG | 0.334168 | 4_1:+59330264 | Msa0560080:CDS |
AATCATGCACTTGCTTGCTT+TGG | 0.334399 | 4_1:+59330255 | Msa0560080:CDS |
AATTATGGCACCAGCAATTT+GGG | 0.334837 | 4_1:-59329815 | None:intergenic |
AGAGGCCATCATGCAGAGAT+AGG | 0.336023 | 4_1:+59331356 | Msa0560080:CDS |
GGGACAAGTGCAGAAGTTTA+TGG | 0.337450 | 4_1:+59331857 | Msa0560080:CDS |
TGTATGAATAATCTTACATT+TGG | 0.338339 | 4_1:+59332121 | Msa0560080:CDS |
GTGCTCTATTTGATCCTAAC+GGG | 0.339283 | 4_1:+59331123 | Msa0560080:CDS |
GGCCCTGCTGGTGGAGTTGT+TGG | 0.344548 | 4_1:+59329676 | Msa0560080:CDS |
CCAGTGATTCTGCACAGATT+TGG | 0.347200 | 4_1:+59332280 | Msa0560080:CDS |
GAAACAGAAAAGCCATTGAT+TGG | 0.347411 | 4_1:+59329724 | Msa0560080:CDS |
GAAGAATTTGAGAAGCTTGC+TGG | 0.352120 | 4_1:+59330084 | Msa0560080:CDS |
ACAGATGCCAATCTTGTTCT+CGG | 0.358530 | 4_1:+59329985 | Msa0560080:CDS |
AGAGAGAGTTGAACTTGTTC+AGG | 0.365487 | 4_1:+59329204 | Msa0560080:CDS |
GAGGTGGTGATGGGCTTGTC+AGG | 0.366399 | 4_1:+59332338 | Msa0560080:CDS |
TCCTCTCAATCAAGGCTGTT+TGG | 0.366985 | 4_1:+59331955 | Msa0560080:CDS |
TATAATTGAAGGCTACTATA+AGG | 0.368534 | 4_1:+59330770 | Msa0560080:CDS |
GGCTTGTGGTCTCAATATAT+TGG | 0.373119 | 4_1:-59330724 | None:intergenic |
ATGATGATGCTTAAATTATT+GGG | 0.374262 | 4_1:-59328420 | None:intergenic |
ACTCCCAGAGGCAGGTTCTA+TGG | 0.376389 | 4_1:-59330745 | None:intergenic |
CTGGAGCTTATTGAACAATA+TGG | 0.378331 | 4_1:+59331620 | Msa0560080:CDS |
AAATCACAATATTTCTGTTC+TGG | 0.382104 | 4_1:-59330671 | None:intergenic |
TTACTGCATTCGCTGTTTAG+TGG | 0.384236 | 4_1:+59331922 | Msa0560080:CDS |
TATAAGGTTTACTTTGGAAA+TGG | 0.385748 | 4_1:+59330786 | Msa0560080:CDS |
TTGTCATAAGTGTGCTGTTA+TGG | 0.390730 | 4_1:+59332654 | Msa0560080:three_prime_UTR |
CAAGAGGCCGGTCCTCATTT+GGG | 0.392637 | 4_1:-59330044 | None:intergenic |
GATAAGCGAAAGGTTTATCT+TGG | 0.393132 | 4_1:+59332481 | Msa0560080:CDS |
TACTAGACATTGCTCCTAGA+TGG | 0.396011 | 4_1:-59331178 | None:intergenic |
CTGGTAATATAAATGCTTAT+CGG | 0.397675 | 4_1:+59330103 | Msa0560080:CDS |
GGAGAGGTTAGCGTTGAGTC+TGG | 0.399860 | 4_1:+59329423 | Msa0560080:CDS |
CCCGAAATACCTTTAACAAT+TGG | 0.400832 | 4_1:-59329262 | None:intergenic |
CTGAGAAGATTGAGTGGATA+AGG | 0.405278 | 4_1:+59329005 | Msa0560080:CDS |
AGACAATGTGTCGTCCAATA+AGG | 0.405869 | 4_1:+59330199 | Msa0560080:CDS |
TATCTTTGTTCAAATATCTC+TGG | 0.407146 | 4_1:-59332256 | None:intergenic |
ACCTTAATTTGCGCATGATA+CGG | 0.407921 | 4_1:+59332773 | Msa0560080:three_prime_UTR |
GTTATAATGGCTCTACAATT+GGG | 0.408132 | 4_1:-59330912 | None:intergenic |
GGAGGAAGGAGCTGCCATTA+AGG | 0.412462 | 4_1:+59331424 | Msa0560080:CDS |
GGCTACTATAAGGTTTACTT+TGG | 0.413293 | 4_1:+59330780 | Msa0560080:CDS |
AATATGGATGGGAAATAATC+AGG | 0.422047 | 4_1:-59330018 | None:intergenic |
CCCGTATCATGCGCAAATTA+AGG | 0.422538 | 4_1:-59332774 | None:intergenic |
TTCCACGGTCATCGGAGCTT+GGG | 0.422905 | 4_1:-59331508 | None:intergenic |
AAATAAAACAGCTTCATGTT+TGG | 0.423094 | 4_1:+59332616 | Msa0560080:three_prime_UTR |
GCAATTCTGTCTGGCCCTGC+TGG | 0.425209 | 4_1:+59329664 | Msa0560080:CDS |
TTCAACGCTTCTTCATTAAG+AGG | 0.425977 | 4_1:-59329307 | None:intergenic |
GGATGGGGCTCTCCAGTGTA+AGG | 0.427006 | 4_1:+59332568 | Msa0560080:CDS |
AAGCTGAGGTGCTTGAATTA+TGG | 0.427501 | 4_1:-59329830 | None:intergenic |
CAACTTGAAAAGCACCGAAC+TGG | 0.428297 | 4_1:-59329897 | None:intergenic |
TGCGCCAGAGAGTACCTTCT+CGG | 0.429400 | 4_1:+59329633 | Msa0560080:CDS |
AATGACAGCTGCAGCTGTTA+CGG | 0.430567 | 4_1:-59331900 | None:intergenic |
AAATGCTTATCGGAAGAATC+AGG | 0.436725 | 4_1:+59330113 | Msa0560080:CDS |
TCTCTATAAGCTTGAAAAGC+TGG | 0.438165 | 4_1:+59330824 | Msa0560080:CDS |
CAGGCTTGTGCTTGTTCGCA+AGG | 0.438311 | 4_1:+59332097 | Msa0560080:CDS |
ATTGGAGGTGGAAGTGGGGC+TGG | 0.439024 | 4_1:+59332172 | Msa0560080:CDS |
CCAAATCTGTGCAGAATCAC+TGG | 0.440423 | 4_1:-59332280 | None:intergenic |
TTTCGATAACATACCGGACC+TGG | 0.445254 | 4_1:-59329943 | None:intergenic |
CCATTGATTGGATTTGATAT+GGG | 0.445828 | 4_1:+59329736 | Msa0560080:CDS |
AAATCCCGGGCCATCGGAAT+GGG | 0.449816 | 4_1:+59328861 | Msa0560080:CDS |
ATTTGTGATGTTAGAGTTCG+TGG | 0.451405 | 4_1:+59330690 | Msa0560080:CDS |
GTTCCATAAACCGCAGCATA+AGG | 0.453381 | 4_1:-59330411 | None:intergenic |
GCGCCAGAGAGTACCTTCTC+GGG | 0.453858 | 4_1:+59329634 | Msa0560080:CDS |
CCTTAATTTGCGCATGATAC+GGG | 0.454494 | 4_1:+59332774 | Msa0560080:three_prime_UTR |
GAAACCATTGGAGGTGGAAG+TGG | 0.456245 | 4_1:+59332166 | Msa0560080:CDS |
CTCTATAAGCTTGAAAAGCT+GGG | 0.456645 | 4_1:+59330825 | Msa0560080:CDS |
GAAGATTGAGTGGATAAGGA+TGG | 0.456909 | 4_1:+59329009 | Msa0560080:CDS |
TTGTCAGGGAAATAGAGTTT+AGG | 0.457091 | 4_1:+59332353 | Msa0560080:CDS |
CTCTGTGACAATTGAAGAAG+AGG | 0.458384 | 4_1:+59331754 | Msa0560080:CDS |
CGTGAGGTGCATTTGCAACT+AGG | 0.458939 | 4_1:-59331148 | None:intergenic |
AGTGATAGTGCAGCTGTAGT+AGG | 0.459852 | 4_1:+59332022 | Msa0560080:CDS |
GTTATTAAAGACTACCTGTC+AGG | 0.462769 | 4_1:+59329541 | Msa0560080:CDS |
GTGCTGGAAACCCAAATTGC+TGG | 0.465569 | 4_1:+59329805 | Msa0560080:CDS |
GCTATGAATATTCTCCTTCA+AGG | 0.465741 | 4_1:+59332796 | Msa0560080:three_prime_UTR |
GACATAACCGAGAACAAGAT+TGG | 0.466015 | 4_1:-59329992 | None:intergenic |
GACATAAACACTGTGGCTGC+TGG | 0.467039 | 4_1:+59329853 | Msa0560080:CDS |
AGAGATTGCACTTGGCTTTG+TGG | 0.468839 | 4_1:+59330164 | Msa0560080:CDS |
GTTCCACGGTCATCGGAGCT+TGG | 0.470281 | 4_1:-59331509 | None:intergenic |
GTTTGTGAGCTTGTTTCAGC+AGG | 0.470544 | 4_1:+59330632 | Msa0560080:CDS |
AAGCTTGAAAAGCTGGGGTA+TGG | 0.470631 | 4_1:+59330831 | Msa0560080:CDS |
GGTGTAACAACAGTTATATC+AGG | 0.473194 | 4_1:-59331293 | None:intergenic |
AAGCGCTTATGGAATGGGAT+TGG | 0.475287 | 4_1:+59330362 | Msa0560080:CDS |
GTGCATGATTCTTTGTCTCA+TGG | 0.477254 | 4_1:-59330242 | None:intergenic |
GGGTATGGACATACGATGTC+TGG | 0.477657 | 4_1:+59330846 | Msa0560080:CDS |
TTATCCTCAGCATGAACAAC+AGG | 0.479218 | 4_1:+59329399 | Msa0560080:CDS |
TTTCGTGATTTGCTTCAGAT+TGG | 0.479339 | 4_1:+59329103 | Msa0560080:CDS |
ATCATCTGCTTTGTCTCCCA+TGG | 0.479739 | 4_1:+59329465 | Msa0560080:CDS |
GAAGTGGGGCTGGTCCTACA+TGG | 0.480601 | 4_1:+59332182 | Msa0560080:CDS |
CAATCAAGGCTGTTTGGCTC+CGG | 0.480823 | 4_1:+59331961 | Msa0560080:CDS |
TGTGCTCTATTTGATCCTAA+CGG | 0.483165 | 4_1:+59331122 | Msa0560080:CDS |
CAAGTTGGACCAGAATCAGT+TGG | 0.483970 | 4_1:+59329913 | Msa0560080:CDS |
CAAATATACTCGGACGAGCC+TGG | 0.483979 | 4_1:-59329129 | None:intergenic |
CTTGTTGACTTGACATCAAG+AGG | 0.484089 | 4_1:-59330060 | None:intergenic |
TATTTAAACTTGAGATATGA+AGG | 0.484417 | 4_1:+59330540 | Msa0560080:CDS |
ACTATCCCATTCCGATGGCC+CGG | 0.487281 | 4_1:-59328866 | None:intergenic |
GATGTTAGAGTTCGTGGTAC+AGG | 0.487747 | 4_1:+59330696 | Msa0560080:CDS |
TTTGGGTACTATGAAACCAT+TGG | 0.487807 | 4_1:+59332154 | Msa0560080:CDS |
TGTGCTATAGCCAGGTCTCT+AGG | 0.488977 | 4_1:+59330300 | Msa0560080:CDS |
TTCTAGAGCGTAAGGGAGAA+AGG | 0.489520 | 4_1:+59329056 | Msa0560080:CDS |
AAGGCAGTTGACTGAAATGA+AGG | 0.490413 | 4_1:+59330218 | Msa0560080:CDS |
TTCCCTCCCTTCAGCCCTCT+AGG | 0.492741 | 4_1:-59332421 | None:intergenic |
AGGATTCTGGAAGAGTTTAC+GGG | 0.493339 | 4_1:+59328950 | Msa0560080:CDS |
AAGCGAAAGGTTTATCTTGG+TGG | 0.493349 | 4_1:+59332484 | Msa0560080:CDS |
AAGAGGAATTTGTCTAGTCC+TGG | 0.495664 | 4_1:+59331601 | Msa0560080:CDS |
ATTCTGTCTGGCCCTGCTGG+TGG | 0.498150 | 4_1:+59329667 | Msa0560080:CDS |
ATTATAGGACTCCCAGAGGC+AGG | 0.498589 | 4_1:-59330753 | None:intergenic |
TGATGTTTATGCTGAAATCC+CGG | 0.498742 | 4_1:+59328847 | Msa0560080:CDS |
AGCTTGTTTCAGCAGGAGTA+CGG | 0.499459 | 4_1:+59330639 | Msa0560080:CDS |
CCCATATCAAATCCAATCAA+TGG | 0.501185 | 4_1:-59329736 | None:intergenic |
TGGAACGACAATTTGAATGA+AGG | 0.501354 | 4_1:+59331224 | Msa0560080:CDS |
AACATGCTTGTGCTATAGCC+AGG | 0.502568 | 4_1:+59330292 | Msa0560080:CDS |
CTTGTGCTTGCAAATCAGAT+AGG | 0.503391 | 4_1:-59331565 | None:intergenic |
GTTGATATTCCTCTCAATCA+AGG | 0.503412 | 4_1:+59331947 | Msa0560080:CDS |
GATCTTAGTTCCACGGTCAT+CGG | 0.504002 | 4_1:-59331516 | None:intergenic |
GAGGCCATCATGCAGAGATA+GGG | 0.504769 | 4_1:+59331357 | Msa0560080:CDS |
ACACTGCCATCATGGTCAAA+AGG | 0.505366 | 4_1:+59330568 | Msa0560080:CDS |
TTTGCTTCAGATTGGTAACC+AGG | 0.505515 | 4_1:+59329111 | Msa0560080:CDS |
TTCATTTCCAAATTTGAAGA+GGG | 0.505645 | 4_1:+59329565 | Msa0560080:CDS |
TCATTCTTGTATTTGTCATG+TGG | 0.505719 | 4_1:-59332228 | None:intergenic |
GGATTTCACAGAGGTGGTGA+TGG | 0.506041 | 4_1:+59332328 | Msa0560080:CDS |
AACACTGTGGCTGCTGGAGG+TGG | 0.506217 | 4_1:+59329859 | Msa0560080:CDS |
GACATTGCTCCTAGATGGAC+AGG | 0.506372 | 4_1:-59331173 | None:intergenic |
CTTGAATCCTGCGAGTTCCT+CGG | 0.508107 | 4_1:-59331538 | None:intergenic |
ACAAAGTCAAGGATTTAAAG+AGG | 0.508942 | 4_1:+59330497 | Msa0560080:CDS |
GGGCACAAAGCAATTCTGTC+TGG | 0.509203 | 4_1:+59329655 | Msa0560080:CDS |
GAAATCCCGGGCCATCGGAA+TGG | 0.511415 | 4_1:+59328860 | Msa0560080:CDS |
CGGTGATTCTCTGAGATGTA+AGG | 0.512758 | 4_1:-59332054 | None:intergenic |
CCTCACGTTCCTGTCCATCT+AGG | 0.515620 | 4_1:+59331164 | Msa0560080:CDS |
CATATTGTTCAATAAGCTCC+AGG | 0.516323 | 4_1:-59331619 | None:intergenic |
GGAGAAGGGAATTAGTTGTC+TGG | 0.516381 | 4_1:+59329351 | Msa0560080:CDS |
AAAATCTGAAGAATTTCGCC+TGG | 0.516730 | 4_1:-59332529 | None:intergenic |
CAATGCGCTTCTAGAGCGTA+AGG | 0.517056 | 4_1:+59329048 | Msa0560080:CDS |
TAACCAACAACTCCACCAGC+AGG | 0.517791 | 4_1:-59329679 | None:intergenic |
TCAAAGTTAAAGTTCCAGTT+CGG | 0.517821 | 4_1:+59329883 | Msa0560080:CDS |
TACCGTTCATGACGATTGCT+GGG | 0.519074 | 4_1:-59330869 | None:intergenic |
TCTGGGAGTCCTATAATTGA+AGG | 0.520534 | 4_1:+59330759 | Msa0560080:CDS |
ACGGATGTGAGTCGATATGC+TGG | 0.520949 | 4_1:+59329769 | Msa0560080:CDS |
TTGGACTTAGAATGAACAGC+GGG | 0.521523 | 4_1:+59332299 | Msa0560080:CDS |
GAAGAGGACTACATGGATGA+TGG | 0.522320 | 4_1:+59331770 | Msa0560080:CDS |
CAAGCCATAGAACCTGCCTC+TGG | 0.522546 | 4_1:+59330741 | Msa0560080:CDS |
GTTACTAACCATCCGTCAGC+CGG | 0.522818 | 4_1:+59331257 | Msa0560080:CDS |
CCTTCAGCCCTCTAGGTGCA+TGG | 0.523628 | 4_1:-59332414 | None:intergenic |
AGCCCCACTTCCACCTCCAA+TGG | 0.524577 | 4_1:-59332170 | None:intergenic |
AGTTGAACTTGTTCAGGCAA+AGG | 0.525601 | 4_1:+59329210 | Msa0560080:CDS |
AACTCGGTAGCATAGTCAAA+TGG | 0.526369 | 4_1:-59330612 | None:intergenic |
ATCCATATTTGGCCCAAATG+AGG | 0.527067 | 4_1:+59330032 | Msa0560080:CDS |
TACTATGAAACCATTGGAGG+TGG | 0.528174 | 4_1:+59332160 | Msa0560080:CDS |
GCTTATTGAACAATATGGAC+TGG | 0.528703 | 4_1:+59331625 | Msa0560080:CDS |
AATTGAAGAAGAGGACTACA+TGG | 0.529608 | 4_1:+59331763 | Msa0560080:CDS |
ACCTCTTCATAAAGATTCGA+AGG | 0.529988 | 4_1:-59329169 | None:intergenic |
AGTTGGAGCACACCCAGGTC+CGG | 0.531279 | 4_1:+59329930 | Msa0560080:CDS |
GGTCCGGTATGTTATCGAAA+AGG | 0.531315 | 4_1:+59329946 | Msa0560080:CDS |
CACCTAGAGGGCTGAAGGGA+GGG | 0.534280 | 4_1:+59332419 | Msa0560080:CDS |
ATGCTGAAATCCCGGGCCAT+CGG | 0.536893 | 4_1:+59328855 | Msa0560080:CDS |
AAGCAGAAGTTACAAAGTCA+AGG | 0.538124 | 4_1:+59330486 | Msa0560080:CDS |
AGGCACAGACACTGCCATCA+TGG | 0.538294 | 4_1:+59330560 | Msa0560080:CDS |
GATTTCACAGAGGTGGTGAT+GGG | 0.538603 | 4_1:+59332329 | Msa0560080:CDS |
ATGCACCGGTGGAAGGGATA+CGG | 0.539409 | 4_1:+59328927 | Msa0560080:CDS |
CGAGGAACAGCACGAACCAT+GGG | 0.540481 | 4_1:-59329481 | None:intergenic |
CTATCCCATTCCGATGGCCC+GGG | 0.540543 | 4_1:-59328865 | None:intergenic |
GCCTTCGAATCTTTATGAAG+AGG | 0.540919 | 4_1:+59329168 | Msa0560080:CDS |
CCATGCACCTAGAGGGCTGA+AGG | 0.540944 | 4_1:+59332414 | Msa0560080:CDS |
TTACTTTGGAAATGGTTGGC+AGG | 0.541377 | 4_1:+59330794 | Msa0560080:CDS |
TCATTTGGGCCAAATATGGA+TGG | 0.541667 | 4_1:-59330030 | None:intergenic |
GAGAGGTTAGCGTTGAGTCT+GGG | 0.542411 | 4_1:+59329424 | Msa0560080:CDS |
AAGATTGAGTGGATAAGGAT+GGG | 0.542642 | 4_1:+59329010 | Msa0560080:CDS |
GGCTACCTCCGGCTGACGGA+TGG | 0.542999 | 4_1:-59331265 | None:intergenic |
TTCAGCATAAACATCAGTAA+AGG | 0.544485 | 4_1:-59328840 | None:intergenic |
AAAGGTGTCTTTCAGGAAGA+GGG | 0.544537 | 4_1:+59331464 | Msa0560080:CDS |
CCACTGGTCCCTTCCCATGT+AGG | 0.545880 | 4_1:-59332196 | None:intergenic |
CAACAGTTATATCAGGAAGA+TGG | 0.546898 | 4_1:-59331286 | None:intergenic |
AAAAGGTGTCTTTCAGGAAG+AGG | 0.548287 | 4_1:+59331463 | Msa0560080:CDS |
ATCAGGAAGATGGCTACCTC+CGG | 0.549418 | 4_1:-59331276 | None:intergenic |
GGGTACTATGAAACCATTGG+AGG | 0.551228 | 4_1:+59332157 | Msa0560080:CDS |
TTGACTTGACATCAAGAGGC+CGG | 0.552464 | 4_1:-59330056 | None:intergenic |
TCAAAGTCCATATTGGAGGA+AGG | 0.552749 | 4_1:+59331410 | Msa0560080:CDS |
GCCAAACAGCCTTGATTGAG+AGG | 0.553303 | 4_1:-59331956 | None:intergenic |
ACGAGGAACAGCACGAACCA+TGG | 0.553745 | 4_1:-59329482 | None:intergenic |
TATGGGTATAGCCGAGCAGA+TGG | 0.554245 | 4_1:+59331040 | Msa0560080:CDS |
TGGAACTGAATCTACTCTTG+AGG | 0.555609 | 4_1:+59330428 | Msa0560080:CDS |
CAAAGTCCTTCCCATCTGCT+CGG | 0.555901 | 4_1:-59331051 | None:intergenic |
GGGCTGGTCCTACATGGGAA+GGG | 0.556224 | 4_1:+59332188 | Msa0560080:CDS |
TGCCCCGAGAAGGTACTCTC+TGG | 0.557665 | 4_1:-59329637 | None:intergenic |
CTTACGCTCTAGAAGCGCAT+TGG | 0.558424 | 4_1:-59329047 | None:intergenic |
AGGTTTACTTTGGAAATGGT+TGG | 0.559740 | 4_1:+59330790 | Msa0560080:CDS |
CTGAGCATTGACTCTAACAA+AGG | 0.560006 | 4_1:+59331812 | Msa0560080:CDS |
TCCACCTGTTGTTCATGCTG+AGG | 0.560655 | 4_1:-59329403 | None:intergenic |
AATTGCTTTGTGCCCCGAGA+AGG | 0.562467 | 4_1:-59329647 | None:intergenic |
TTATGAAGAGGTTGTTGAGG+TGG | 0.562789 | 4_1:+59329180 | Msa0560080:CDS |
AGGTGCATGGACACGTCTCT+CGG | 0.564718 | 4_1:-59332401 | None:intergenic |
ATTTGGAAATGAATCCTGAC+AGG | 0.565240 | 4_1:-59329555 | None:intergenic |
AAACCATTGGAGGTGGAAGT+GGG | 0.565646 | 4_1:+59332167 | Msa0560080:CDS |
ACAGGTAGTCTTTAATAACT+GGG | 0.566671 | 4_1:-59329537 | None:intergenic |
TATGACGATGCACCGGTGGA+AGG | 0.566956 | 4_1:+59328920 | Msa0560080:CDS |
GGGGCTGGTCCTACATGGGA+AGG | 0.568443 | 4_1:+59332187 | Msa0560080:CDS |
CTACATGGGAAGGGACCAGT+GGG | 0.568834 | 4_1:+59332197 | Msa0560080:CDS |
TTTCAACAAATATCAAAGAA+CGG | 0.571010 | 4_1:+59331087 | Msa0560080:CDS |
ATGACGATGCACCGGTGGAA+GGG | 0.572483 | 4_1:+59328921 | Msa0560080:CDS |
ATCCTCCGTATCCCTTCCAC+CGG | 0.572721 | 4_1:-59328932 | None:intergenic |
TTATCGAAAAGGTGGAGAGT+TGG | 0.573316 | 4_1:+59329957 | Msa0560080:CDS |
TGCTCTATTTGATCCTAACG+GGG | 0.574195 | 4_1:+59331124 | Msa0560080:CDS |
AGAGAGATGCTGAAGTCAGT+TGG | 0.574222 | 4_1:+59331701 | Msa0560080:CDS |
AAATGTTGTTGAAGAAGTGC+AGG | 0.574826 | 4_1:+59330386 | Msa0560080:CDS |
CTGAAACAAGCTCACAAACT+CGG | 0.575242 | 4_1:-59330628 | None:intergenic |
GAGGCAGGTTCTATGGCTTG+TGG | 0.576679 | 4_1:-59330738 | None:intergenic |
TTCGATAACATACCGGACCT+GGG | 0.579479 | 4_1:-59329942 | None:intergenic |
TCTTTATGAAGAGGTTGTTG+AGG | 0.579619 | 4_1:+59329177 | Msa0560080:CDS |
GATGTTTATGCTGAAATCCC+GGG | 0.582630 | 4_1:+59328848 | Msa0560080:CDS |
AGGCCATCATGCAGAGATAG+GGG | 0.585050 | 4_1:+59331358 | Msa0560080:CDS |
ATTCATTTCCAAATTTGAAG+AGG | 0.585876 | 4_1:+59329564 | Msa0560080:CDS |
AAAGAATGCTGACGGTAACT+GGG | 0.588860 | 4_1:-59332378 | None:intergenic |
TATTTGGCCCAAATGAGGAC+CGG | 0.589884 | 4_1:+59330037 | Msa0560080:CDS |
TCCTCAGCATGAACAACAGG+TGG | 0.592506 | 4_1:+59329402 | Msa0560080:CDS |
AAGCCATAGAACCTGCCTCT+GGG | 0.594140 | 4_1:+59330742 | Msa0560080:CDS |
TTGATTGGATTTGATATGGG+AGG | 0.595299 | 4_1:+59329739 | Msa0560080:CDS |
CCTACATGGGAAGGGACCAG+TGG | 0.595461 | 4_1:+59332196 | Msa0560080:CDS |
ACGGTCGAAGAGATTGCACT+TGG | 0.597036 | 4_1:+59330156 | Msa0560080:CDS |
CTAAGATCCGAGGAACTCGC+AGG | 0.598988 | 4_1:+59331531 | Msa0560080:CDS |
CCGGTATGTTATCGAAAAGG+TGG | 0.601821 | 4_1:+59329949 | Msa0560080:CDS |
AGATGGCTACCTCCGGCTGA+CGG | 0.602035 | 4_1:-59331269 | None:intergenic |
AAGTGGGGCTGGTCCTACAT+GGG | 0.602084 | 4_1:+59332183 | Msa0560080:CDS |
TTCCTCGGATCTTAGTTCCA+CGG | 0.603831 | 4_1:-59331523 | None:intergenic |
TCATTTCCAAATTTGAAGAG+GGG | 0.604683 | 4_1:+59329566 | Msa0560080:CDS |
GTGAAGATTCATATTCCAGA+AGG | 0.608129 | 4_1:+59331983 | Msa0560080:CDS |
GGGCTGAAGGGAGGGAACGA+CGG | 0.608888 | 4_1:+59332427 | Msa0560080:CDS |
TCGTGGTCTAACAGCTAGTG+TGG | 0.608912 | 4_1:+59329501 | Msa0560080:CDS |
TTGTTTATGCAATCAGATGG+AGG | 0.609273 | 4_1:+59329607 | Msa0560080:CDS |
TCTGGAATATGAATCTTCAC+CGG | 0.609366 | 4_1:-59331980 | None:intergenic |
AGCATGAACAACAGGTGGAG+AGG | 0.609686 | 4_1:+59329407 | Msa0560080:CDS |
TTCTTTCATACCTAGAGACC+TGG | 0.610605 | 4_1:-59330310 | None:intergenic |
CGCCAGAGAGTACCTTCTCG+GGG | 0.610608 | 4_1:+59329635 | Msa0560080:CDS |
CATGTGGCACTGTACCCCAC+TGG | 0.611948 | 4_1:-59332212 | None:intergenic |
CAAGTAGCAGCAAATCAAAG+AGG | 0.612527 | 4_1:+59331584 | Msa0560080:CDS |
GATAGTGCAGCTGTAGTAGG+AGG | 0.613944 | 4_1:+59332025 | Msa0560080:CDS |
TCTAAAGAAAGATAAGCGAA+AGG | 0.615035 | 4_1:+59332471 | Msa0560080:CDS |
AGCATATCGACTCACATCCG+TGG | 0.615640 | 4_1:-59329767 | None:intergenic |
CATTTGGGCCAAATATGGAT+GGG | 0.617702 | 4_1:-59330029 | None:intergenic |
CATGCACCTAGAGGGCTGAA+GGG | 0.618479 | 4_1:+59332415 | Msa0560080:CDS |
AAAAGAAAGAAACCTTACAC+TGG | 0.619401 | 4_1:-59332580 | None:intergenic |
GGAGGGAACGACGGTGCACG+TGG | 0.619913 | 4_1:+59332436 | Msa0560080:CDS |
GGCCCAGCAATCGTCATGAA+CGG | 0.621020 | 4_1:+59330867 | Msa0560080:CDS |
CAATGTCTAGTACAGTTCGT+TGG | 0.622161 | 4_1:+59331189 | Msa0560080:CDS |
TACCTACTGAGAAGATTGAG+TGG | 0.625069 | 4_1:+59328999 | Msa0560080:CDS |
GCACCTAGAGGGCTGAAGGG+AGG | 0.625206 | 4_1:+59332418 | Msa0560080:CDS |
TACGTACAGATGAATGCAGA+AGG | 0.626574 | 4_1:+59331671 | Msa0560080:CDS |
GGTGCATCGTCATAGTTCAA+AGG | 0.627398 | 4_1:-59328911 | None:intergenic |
TTTGAACTATGACGATGCAC+CGG | 0.631396 | 4_1:+59328913 | Msa0560080:CDS |
GTATCATGCGCAAATTAAGG+TGG | 0.631474 | 4_1:-59332771 | None:intergenic |
ATGGTTCGTGCTGTTCCTCG+TGG | 0.632048 | 4_1:+59329484 | Msa0560080:CDS |
AGGTGGTGATGGGCTTGTCA+GGG | 0.632510 | 4_1:+59332339 | Msa0560080:CDS |
AGGCAGTTGACTGAAATGAA+GGG | 0.634201 | 4_1:+59330219 | Msa0560080:CDS |
ATCCACTCAATCTTCTCAGT+AGG | 0.635256 | 4_1:-59329001 | None:intergenic |
GCTATAGCACAAGCATGTTG+AGG | 0.636982 | 4_1:-59330288 | None:intergenic |
GACGTGTCCATGCACCTAGA+GGG | 0.637050 | 4_1:+59332407 | Msa0560080:CDS |
TCTATAAGCTTGAAAAGCTG+GGG | 0.641557 | 4_1:+59330826 | Msa0560080:CDS |
GGAGATGGATTTCACAGAGG+TGG | 0.641841 | 4_1:+59332322 | Msa0560080:CDS |
TCCATCTGCAAAAGACATGA+CGG | 0.644265 | 4_1:+59330137 | Msa0560080:CDS |
AATATGGACTTTGAAAATGG+AGG | 0.644843 | 4_1:-59331401 | None:intergenic |
ATGGGTATAGCCGAGCAGAT+GGG | 0.645074 | 4_1:+59331041 | Msa0560080:CDS |
GTATAGCCGAGCAGATGGGA+AGG | 0.646472 | 4_1:+59331045 | Msa0560080:CDS |
TGGAAGTTATGAGCAAGTGC+TGG | 0.647503 | 4_1:+59329789 | Msa0560080:CDS |
TGGTGGTAAGAATTCTGTTG+AGG | 0.647616 | 4_1:+59332501 | Msa0560080:CDS |
AAGGTGTCTTTCAGGAAGAG+GGG | 0.647947 | 4_1:+59331465 | Msa0560080:CDS |
AAATGCAGTAAATACAACAT+CGG | 0.648438 | 4_1:-59332074 | None:intergenic |
ACTACAGCTGCACTATCACT+AGG | 0.649872 | 4_1:-59332019 | None:intergenic |
TCAATACTATCCCATTCCGA+TGG | 0.651354 | 4_1:-59328871 | None:intergenic |
GAATCAGTTGGAGCACACCC+AGG | 0.651733 | 4_1:+59329925 | Msa0560080:CDS |
GGACTTAGAATGAACAGCGG+GGG | 0.652245 | 4_1:+59332301 | Msa0560080:CDS |
ATTGCTGTGTGTGTGACTAG+AGG | 0.653431 | 4_1:+59329079 | Msa0560080:CDS |
GAAGGGAATTAGTTGTCTGG+CGG | 0.655429 | 4_1:+59329354 | Msa0560080:CDS |
ATAAACACTGTGGCTGCTGG+AGG | 0.659055 | 4_1:+59329856 | Msa0560080:CDS |
GACCGTGGAACTAAGATCCG+AGG | 0.659078 | 4_1:+59331521 | Msa0560080:CDS |
AGTGCAGGAGCCTTATGCTG+CGG | 0.660386 | 4_1:+59330401 | Msa0560080:CDS |
GATAAGGATGGGTACAACTG+TGG | 0.660581 | 4_1:+59329021 | Msa0560080:CDS |
AACCAACAACTCCACCAGCA+GGG | 0.660602 | 4_1:-59329678 | None:intergenic |
AGACGTGTCCATGCACCTAG+AGG | 0.661021 | 4_1:+59332406 | Msa0560080:CDS |
AGGATGGGGAGTGTTACTGA+AGG | 0.663620 | 4_1:+59328785 | Msa0560080:intron |
AACCATTGGAGGTGGAAGTG+GGG | 0.667336 | 4_1:+59332168 | Msa0560080:CDS |
GAACTATGACGATGCACCGG+TGG | 0.670012 | 4_1:+59328916 | Msa0560080:CDS |
ACAGTAAGATCAAATATACT+CGG | 0.674153 | 4_1:-59329139 | None:intergenic |
ACAGTGTTTATGTCAAGCTG+AGG | 0.678380 | 4_1:-59329844 | None:intergenic |
TCTCTCGGAAAGAATGCTGA+CGG | 0.680258 | 4_1:-59332386 | None:intergenic |
TTCCCAAGCTCCGATGACCG+TGG | 0.682301 | 4_1:+59331506 | Msa0560080:CDS |
ACTAACCATCCGTCAGCCGG+AGG | 0.686340 | 4_1:+59331260 | Msa0560080:CDS |
AATGCGCTTCTAGAGCGTAA+GGG | 0.686495 | 4_1:+59329049 | Msa0560080:CDS |
GCTCTATTTGATCCTAACGG+GGG | 0.687490 | 4_1:+59331125 | Msa0560080:CDS |
GGCCATCATGCAGAGATAGG+GGG | 0.689810 | 4_1:+59331359 | Msa0560080:CDS |
TGATATGGGAGGTACATCCA+CGG | 0.690353 | 4_1:+59329750 | Msa0560080:CDS |
CAGGTAGTCTTTAATAACTG+GGG | 0.696300 | 4_1:-59329536 | None:intergenic |
CCTAGATGGACAGGAACGTG+AGG | 0.696615 | 4_1:-59331164 | None:intergenic |
CACCGGTGGAAGGGATACGG+AGG | 0.701888 | 4_1:+59328930 | Msa0560080:CDS |
TTCAATTATAGGACTCCCAG+AGG | 0.708433 | 4_1:-59330757 | None:intergenic |
ACACTAGCTGTTAGACCACG+AGG | 0.721601 | 4_1:-59329499 | None:intergenic |
TGGACTTAGAATGAACAGCG+GGG | 0.722972 | 4_1:+59332300 | Msa0560080:CDS |
TTTGGACTTAGAATGAACAG+CGG | 0.737183 | 4_1:+59332298 | Msa0560080:CDS |
GCACACTTATGACAACACAT+CGG | 0.760438 | 4_1:-59332646 | None:intergenic |
TCAGCTTGACATAAACACTG+TGG | 0.791196 | 4_1:+59329846 | Msa0560080:CDS |
TACATGGGAAGGGACCAGTG+GGG | 0.800679 | 4_1:+59332198 | Msa0560080:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTAAATCAATATGAAATTTT+TGG | + | chr4_1:59328524-59328543 | Msa0560080:intron | 10.0% |
!! | ATAAACTAAAAAATATATTG+GGG | - | chr4_1:59328617-59328636 | None:intergenic | 10.0% |
!! | CTATAAACTAAAAAATATAT+TGG | - | chr4_1:59328619-59328638 | None:intergenic | 10.0% |
!!! | TAAATGCAATTTTTGATAAT+TGG | + | chr4_1:59328715-59328734 | Msa0560080:intron | 15.0% |
!!! | ATGATGATGCTTAAATTATT+GGG | - | chr4_1:59328423-59328442 | None:intergenic | 20.0% |
!! | TAAAAAATATATTGGGGATT+CGG | - | chr4_1:59328611-59328630 | None:intergenic | 20.0% |
!! | TATTTAAACTTGAGATATGA+AGG | + | chr4_1:59330540-59330559 | Msa0560080:CDS | 20.0% |
!!! | AATTTTGATGTTTCCATATT+TGG | - | chr4_1:59330937-59330956 | None:intergenic | 20.0% |
!! | TTTCAACAAATATCAAAGAA+CGG | + | chr4_1:59331087-59331106 | Msa0560080:CDS | 20.0% |
!!! | TTACACCTGTTTTTTTTAAT+GGG | + | chr4_1:59331309-59331328 | Msa0560080:CDS | 20.0% |
!! | TGTATGAATAATCTTACATT+TGG | + | chr4_1:59332121-59332140 | Msa0560080:CDS | 20.0% |
!! | GATGATGATGCTTAAATTAT+TGG | - | chr4_1:59328424-59328443 | None:intergenic | 25.0% |
! | ACAGAGAAATGAAAATGAAT+CGG | - | chr4_1:59328489-59328508 | None:intergenic | 25.0% |
! | CCTATTAATGCACAATTATA+AGG | - | chr4_1:59328768-59328787 | None:intergenic | 25.0% |
! | CCTTATAATTGTGCATTAAT+AGG | + | chr4_1:59328765-59328784 | Msa0560080:intron | 25.0% |
! | ATAATTGTGCATTAATAGGA+TGG | + | chr4_1:59328769-59328788 | Msa0560080:intron | 25.0% |
! | TAATTGTGCATTAATAGGAT+GGG | + | chr4_1:59328770-59328789 | Msa0560080:intron | 25.0% |
! | ACAGTAAGATCAAATATACT+CGG | - | chr4_1:59329142-59329161 | None:intergenic | 25.0% |
! | ATTCATTTCCAAATTTGAAG+AGG | + | chr4_1:59329564-59329583 | Msa0560080:CDS | 25.0% |
! | TTCATTTCCAAATTTGAAGA+GGG | + | chr4_1:59329565-59329584 | Msa0560080:CDS | 25.0% |
! | CTGGTAATATAAATGCTTAT+CGG | + | chr4_1:59330103-59330122 | Msa0560080:CDS | 25.0% |
!! | TGCTTATTCACAAATTTTGT+GGG | + | chr4_1:59330334-59330353 | Msa0560080:CDS | 25.0% |
!! | AAATCACAATATTTCTGTTC+TGG | - | chr4_1:59330674-59330693 | None:intergenic | 25.0% |
! | TTATAGTAGCCTTCAATTAT+AGG | - | chr4_1:59330771-59330790 | None:intergenic | 25.0% |
! | TATAATTGAAGGCTACTATA+AGG | + | chr4_1:59330770-59330789 | Msa0560080:CDS | 25.0% |
!! | TATAAGGTTTACTTTGGAAA+TGG | + | chr4_1:59330786-59330805 | Msa0560080:CDS | 25.0% |
! | GTTTCCATATTTGGTTATAA+TGG | - | chr4_1:59330928-59330947 | None:intergenic | 25.0% |
!! | TATTTTCAATCACAGGTTTA+TGG | + | chr4_1:59331022-59331041 | Msa0560080:CDS | 25.0% |
!! | ATTTTCAATCACAGGTTTAT+GGG | + | chr4_1:59331023-59331042 | Msa0560080:CDS | 25.0% |
!!! | GTTACACCTGTTTTTTTTAA+TGG | + | chr4_1:59331308-59331327 | Msa0560080:CDS | 25.0% |
! | AACTTCCCATTAAAAAAAAC+AGG | - | chr4_1:59331317-59331336 | None:intergenic | 25.0% |
!!! | TGTTTTTTTTAATGGGAAGT+TGG | + | chr4_1:59331316-59331335 | Msa0560080:CDS | 25.0% |
!!! | GTATTTTTTGTTGCAAATAG+AGG | + | chr4_1:59331338-59331357 | Msa0560080:CDS | 25.0% |
!!! | AAGCAATTTTTGATTTTGGT+GGG | + | chr4_1:59331837-59331856 | Msa0560080:CDS | 25.0% |
! | AAATGCAGTAAATACAACAT+CGG | - | chr4_1:59332077-59332096 | None:intergenic | 25.0% |
! | TATCTTTGTTCAAATATCTC+TGG | - | chr4_1:59332259-59332278 | None:intergenic | 25.0% |
! | AAATAAAACAGCTTCATGTT+TGG | + | chr4_1:59332616-59332635 | Msa0560080:three_prime_UTR | 25.0% |
!! | TTTGGTCTTGTTAGATTAGA+TGG | + | chr4_1:59328542-59328561 | Msa0560080:intron | 30.0% |
! | GCATTTAAGTTTGAGAATAG+AGG | - | chr4_1:59328702-59328721 | None:intergenic | 30.0% |
TTGTAATGTACATGACATTG+CGG | + | chr4_1:59328740-59328759 | Msa0560080:intron | 30.0% | |
AATTGTGCATTAATAGGATG+GGG | + | chr4_1:59328771-59328790 | Msa0560080:intron | 30.0% | |
!! | TTAAGATTTTGTATCGACAG+AGG | + | chr4_1:59328812-59328831 | Msa0560080:CDS | 30.0% |
TTCAGCATAAACATCAGTAA+AGG | - | chr4_1:59328843-59328862 | None:intergenic | 30.0% | |
!! | GCCAATTGTTAAAGGTATTT+CGG | + | chr4_1:59329261-59329280 | Msa0560080:CDS | 30.0% |
!! | CCAATTGTTAAAGGTATTTC+GGG | + | chr4_1:59329262-59329281 | Msa0560080:CDS | 30.0% |
!! | TCCAGTAAATTTTTCAGTAC+AGG | - | chr4_1:59329334-59329353 | None:intergenic | 30.0% |
ACTGAAAAATTTACTGGAGA+AGG | + | chr4_1:59329336-59329355 | Msa0560080:CDS | 30.0% | |
CTGAAAAATTTACTGGAGAA+GGG | + | chr4_1:59329337-59329356 | Msa0560080:CDS | 30.0% | |
ACAGGTAGTCTTTAATAACT+GGG | - | chr4_1:59329540-59329559 | None:intergenic | 30.0% | |
TCATTTCCAAATTTGAAGAG+GGG | + | chr4_1:59329566-59329585 | Msa0560080:CDS | 30.0% | |
!!! | GTTTTGTTTATGCAATCAGA+TGG | + | chr4_1:59329604-59329623 | Msa0560080:CDS | 30.0% |
! | CCATTGATTGGATTTGATAT+GGG | + | chr4_1:59329736-59329755 | Msa0560080:CDS | 30.0% |
TCAAAGTTAAAGTTCCAGTT+CGG | + | chr4_1:59329883-59329902 | Msa0560080:CDS | 30.0% | |
AATATGGATGGGAAATAATC+AGG | - | chr4_1:59330021-59330040 | None:intergenic | 30.0% | |
GATTATTTCCCATCCATATT+TGG | + | chr4_1:59330021-59330040 | Msa0560080:CDS | 30.0% | |
! | GTGCTTATTCACAAATTTTG+TGG | + | chr4_1:59330333-59330352 | Msa0560080:CDS | 30.0% |
! | ATTTTAAGCGCTTATGGAAT+GGG | + | chr4_1:59330357-59330376 | Msa0560080:CDS | 30.0% |
ACAAAGTCAAGGATTTAAAG+AGG | + | chr4_1:59330497-59330516 | Msa0560080:CDS | 30.0% | |
! | TATTTTCCTTTTGACCATGA+TGG | - | chr4_1:59330577-59330596 | None:intergenic | 30.0% |
! | GTTATAATGGCTCTACAATT+GGG | - | chr4_1:59330915-59330934 | None:intergenic | 30.0% |
AGAGCCATTATAACCAAATA+TGG | + | chr4_1:59330921-59330940 | Msa0560080:CDS | 30.0% | |
! | AACTCTCTATTTTCAATCAC+AGG | + | chr4_1:59331015-59331034 | Msa0560080:CDS | 30.0% |
! | TTTGAATGAAGGAGATGTTT+TGG | + | chr4_1:59331235-59331254 | Msa0560080:CDS | 30.0% |
! | AATATGGACTTTGAAAATGG+AGG | - | chr4_1:59331404-59331423 | None:intergenic | 30.0% |
! | TCCATTTTCAAAGTCCATAT+TGG | + | chr4_1:59331403-59331422 | Msa0560080:CDS | 30.0% |
! | TCCAATATGGACTTTGAAAA+TGG | - | chr4_1:59331407-59331426 | None:intergenic | 30.0% |
! | ATTTTCAAAGTCCATATTGG+AGG | + | chr4_1:59331406-59331425 | Msa0560080:CDS | 30.0% |
!!! | GGAGAAGCAATTTTTGATTT+TGG | + | chr4_1:59331833-59331852 | Msa0560080:CDS | 30.0% |
!!! | GAAGCAATTTTTGATTTTGG+TGG | + | chr4_1:59331836-59331855 | Msa0560080:CDS | 30.0% |
TGTTGTATTTACTGCATTTC+AGG | + | chr4_1:59332078-59332097 | Msa0560080:CDS | 30.0% | |
TCATTCTTGTATTTGTCATG+TGG | - | chr4_1:59332231-59332250 | None:intergenic | 30.0% | |
TCTAAAGAAAGATAAGCGAA+AGG | + | chr4_1:59332471-59332490 | Msa0560080:CDS | 30.0% | |
AAAAGAAAGAAACCTTACAC+TGG | - | chr4_1:59332583-59332602 | None:intergenic | 30.0% | |
! | AGTGTAAGGTTTCTTTCTTT+TGG | + | chr4_1:59332582-59332601 | Msa0560080:exon | 30.0% |
AATCGGAAGAAACACTTACA+GGG | - | chr4_1:59328472-59328491 | None:intergenic | 35.0% | |
TGTAATGTACATGACATTGC+GGG | + | chr4_1:59328741-59328760 | Msa0560080:intron | 35.0% | |
TGATGTTTATGCTGAAATCC+CGG | + | chr4_1:59328847-59328866 | Msa0560080:CDS | 35.0% | |
AAGATTGAGTGGATAAGGAT+GGG | + | chr4_1:59329010-59329029 | Msa0560080:CDS | 35.0% | |
!! | TTTCGTGATTTGCTTCAGAT+TGG | + | chr4_1:59329103-59329122 | Msa0560080:CDS | 35.0% |
ACCTCTTCATAAAGATTCGA+AGG | - | chr4_1:59329172-59329191 | None:intergenic | 35.0% | |
TCTTTATGAAGAGGTTGTTG+AGG | + | chr4_1:59329177-59329196 | Msa0560080:CDS | 35.0% | |
CCCGAAATACCTTTAACAAT+TGG | - | chr4_1:59329265-59329284 | None:intergenic | 35.0% | |
TTCAACGCTTCTTCATTAAG+AGG | - | chr4_1:59329310-59329329 | None:intergenic | 35.0% | |
GCCTGTACTGAAAAATTTAC+TGG | + | chr4_1:59329330-59329349 | Msa0560080:CDS | 35.0% | |
CAGGTAGTCTTTAATAACTG+GGG | - | chr4_1:59329539-59329558 | None:intergenic | 35.0% | |
GACAGGTAGTCTTTAATAAC+TGG | - | chr4_1:59329541-59329560 | None:intergenic | 35.0% | |
GTTATTAAAGACTACCTGTC+AGG | + | chr4_1:59329541-59329560 | Msa0560080:CDS | 35.0% | |
ATTTGGAAATGAATCCTGAC+AGG | - | chr4_1:59329558-59329577 | None:intergenic | 35.0% | |
TTGTTTATGCAATCAGATGG+AGG | + | chr4_1:59329607-59329626 | Msa0560080:CDS | 35.0% | |
! | GGTTACTCACAAACTCTTTT+TGG | + | chr4_1:59329697-59329716 | Msa0560080:CDS | 35.0% |
GAAACAGAAAAGCCATTGAT+TGG | + | chr4_1:59329724-59329743 | Msa0560080:CDS | 35.0% | |
! | GCCATTGATTGGATTTGATA+TGG | + | chr4_1:59329735-59329754 | Msa0560080:CDS | 35.0% |
CCCATATCAAATCCAATCAA+TGG | - | chr4_1:59329739-59329758 | None:intergenic | 35.0% | |
TTGATTGGATTTGATATGGG+AGG | + | chr4_1:59329739-59329758 | Msa0560080:CDS | 35.0% | |
AATTATGGCACCAGCAATTT+GGG | - | chr4_1:59329818-59329837 | None:intergenic | 35.0% | |
AAATGCTTATCGGAAGAATC+AGG | + | chr4_1:59330113-59330132 | Msa0560080:CDS | 35.0% | |
ATTTCAGTCAACTGCCTTAT+TGG | - | chr4_1:59330216-59330235 | None:intergenic | 35.0% | |
! | GATTTTAAGCGCTTATGGAA+TGG | + | chr4_1:59330356-59330375 | Msa0560080:CDS | 35.0% |
! | AAATGTTGTTGAAGAAGTGC+AGG | + | chr4_1:59330386-59330405 | Msa0560080:CDS | 35.0% |
AAGCAGAAGTTACAAAGTCA+AGG | + | chr4_1:59330486-59330505 | Msa0560080:CDS | 35.0% | |
ATTTGTGATGTTAGAGTTCG+TGG | + | chr4_1:59330690-59330709 | Msa0560080:CDS | 35.0% | |
GGCTACTATAAGGTTTACTT+TGG | + | chr4_1:59330780-59330799 | Msa0560080:CDS | 35.0% | |
! | AGGTTTACTTTGGAAATGGT+TGG | + | chr4_1:59330790-59330809 | Msa0560080:CDS | 35.0% |
!! | AGCTTTTCAAGCTTATAGAG+AGG | - | chr4_1:59330825-59330844 | None:intergenic | 35.0% |
TCTCTATAAGCTTGAAAAGC+TGG | + | chr4_1:59330824-59330843 | Msa0560080:CDS | 35.0% | |
CTCTATAAGCTTGAAAAGCT+GGG | + | chr4_1:59330825-59330844 | Msa0560080:CDS | 35.0% | |
TCTATAAGCTTGAAAAGCTG+GGG | + | chr4_1:59330826-59330845 | Msa0560080:CDS | 35.0% | |
! | GGTTATAATGGCTCTACAAT+TGG | - | chr4_1:59330916-59330935 | None:intergenic | 35.0% |
!!! | GATATTTTAATGCTGCTCAC+AGG | - | chr4_1:59330972-59330991 | None:intergenic | 35.0% |
TGTGCTCTATTTGATCCTAA+CGG | + | chr4_1:59331122-59331141 | Msa0560080:CDS | 35.0% | |
TGGAACGACAATTTGAATGA+AGG | + | chr4_1:59331224-59331243 | Msa0560080:CDS | 35.0% | |
CAACAGTTATATCAGGAAGA+TGG | - | chr4_1:59331289-59331308 | None:intergenic | 35.0% | |
GGTGTAACAACAGTTATATC+AGG | - | chr4_1:59331296-59331315 | None:intergenic | 35.0% | |
AACAAGCTTAAACGCCTTAA+TGG | - | chr4_1:59331441-59331460 | None:intergenic | 35.0% | |
!! | GCGTTTAAGCTTGTTGAAAA+AGG | + | chr4_1:59331446-59331465 | Msa0560080:CDS | 35.0% |
!! | TGTTGAAAAAGGTGTCTTTC+AGG | + | chr4_1:59331457-59331476 | Msa0560080:CDS | 35.0% |
CATATTGTTCAATAAGCTCC+AGG | - | chr4_1:59331622-59331641 | None:intergenic | 35.0% | |
CTGGAGCTTATTGAACAATA+TGG | + | chr4_1:59331620-59331639 | Msa0560080:CDS | 35.0% | |
GCTTATTGAACAATATGGAC+TGG | + | chr4_1:59331625-59331644 | Msa0560080:CDS | 35.0% | |
AATTGAAGAAGAGGACTACA+TGG | + | chr4_1:59331763-59331782 | Msa0560080:CDS | 35.0% | |
GTGCAGAAGTTTATGGTAAT+TGG | + | chr4_1:59331864-59331883 | Msa0560080:CDS | 35.0% | |
GTTGATATTCCTCTCAATCA+AGG | + | chr4_1:59331947-59331966 | Msa0560080:CDS | 35.0% | |
! | TCTGGAATATGAATCTTCAC+CGG | - | chr4_1:59331983-59332002 | None:intergenic | 35.0% |
GTGAAGATTCATATTCCAGA+AGG | + | chr4_1:59331983-59332002 | Msa0560080:CDS | 35.0% | |
! | ACATTTGGAGATGACACTTT+TGG | + | chr4_1:59332136-59332155 | Msa0560080:CDS | 35.0% |
! | CATTTGGAGATGACACTTTT+GGG | + | chr4_1:59332137-59332156 | Msa0560080:CDS | 35.0% |
TTTGGGTACTATGAAACCAT+TGG | + | chr4_1:59332154-59332173 | Msa0560080:CDS | 35.0% | |
TTTGGACTTAGAATGAACAG+CGG | + | chr4_1:59332298-59332317 | Msa0560080:CDS | 35.0% | |
TTGTCAGGGAAATAGAGTTT+AGG | + | chr4_1:59332353-59332372 | Msa0560080:CDS | 35.0% | |
GATAAGCGAAAGGTTTATCT+TGG | + | chr4_1:59332481-59332500 | Msa0560080:CDS | 35.0% | |
AAAATCTGAAGAATTTCGCC+TGG | - | chr4_1:59332532-59332551 | None:intergenic | 35.0% | |
!!! | ATTCTTCAGATTTTGACTCC+TGG | + | chr4_1:59332538-59332557 | Msa0560080:CDS | 35.0% |
!!! | TTCTTCAGATTTTGACTCCT+GGG | + | chr4_1:59332539-59332558 | Msa0560080:CDS | 35.0% |
! | TTGTCATAAGTGTGCTGTTA+TGG | + | chr4_1:59332654-59332673 | Msa0560080:three_prime_UTR | 35.0% |
!! | ACCTTAATTTGCGCATGATA+CGG | + | chr4_1:59332773-59332792 | Msa0560080:three_prime_UTR | 35.0% |
GAATCGGAAGAAACACTTAC+AGG | - | chr4_1:59328473-59328492 | None:intergenic | 40.0% | |
! | TATTGGGGATTCGGTTTCTT+CGG | - | chr4_1:59328602-59328621 | None:intergenic | 40.0% |
GTAATGTACATGACATTGCG+GGG | + | chr4_1:59328742-59328761 | Msa0560080:intron | 40.0% | |
!! | AGATTTTGTATCGACAGAGG+CGG | + | chr4_1:59328815-59328834 | Msa0560080:CDS | 40.0% |
GATGTTTATGCTGAAATCCC+GGG | + | chr4_1:59328848-59328867 | Msa0560080:CDS | 40.0% | |
TCAATACTATCCCATTCCGA+TGG | - | chr4_1:59328874-59328893 | None:intergenic | 40.0% | |
TTTGAACTATGACGATGCAC+CGG | + | chr4_1:59328913-59328932 | Msa0560080:CDS | 40.0% | |
! | GAGGATTCTGGAAGAGTTTA+CGG | + | chr4_1:59328949-59328968 | Msa0560080:CDS | 40.0% |
! | AGGATTCTGGAAGAGTTTAC+GGG | + | chr4_1:59328950-59328969 | Msa0560080:CDS | 40.0% |
TACCTACTGAGAAGATTGAG+TGG | + | chr4_1:59328999-59329018 | Msa0560080:CDS | 40.0% | |
ATCCACTCAATCTTCTCAGT+AGG | - | chr4_1:59329004-59329023 | None:intergenic | 40.0% | |
CTGAGAAGATTGAGTGGATA+AGG | + | chr4_1:59329005-59329024 | Msa0560080:CDS | 40.0% | |
GAAGATTGAGTGGATAAGGA+TGG | + | chr4_1:59329009-59329028 | Msa0560080:CDS | 40.0% | |
! | TTTGCTTCAGATTGGTAACC+AGG | + | chr4_1:59329111-59329130 | Msa0560080:CDS | 40.0% |
GCCTTCGAATCTTTATGAAG+AGG | + | chr4_1:59329168-59329187 | Msa0560080:CDS | 40.0% | |
TTATGAAGAGGTTGTTGAGG+TGG | + | chr4_1:59329180-59329199 | Msa0560080:CDS | 40.0% | |
! | AGAGAGAGTTGAACTTGTTC+AGG | + | chr4_1:59329204-59329223 | Msa0560080:CDS | 40.0% |
! | AGTTGAACTTGTTCAGGCAA+AGG | + | chr4_1:59329210-59329229 | Msa0560080:CDS | 40.0% |
GCTTCTTCGCCAATTGTTAA+AGG | + | chr4_1:59329253-59329272 | Msa0560080:CDS | 40.0% | |
TTATCCTCAGCATGAACAAC+AGG | + | chr4_1:59329399-59329418 | Msa0560080:CDS | 40.0% | |
GAATTATGGCACCAGCAATT+TGG | - | chr4_1:59329819-59329838 | None:intergenic | 40.0% | |
! | AAGCTGAGGTGCTTGAATTA+TGG | - | chr4_1:59329833-59329852 | None:intergenic | 40.0% |
ACAGTGTTTATGTCAAGCTG+AGG | - | chr4_1:59329847-59329866 | None:intergenic | 40.0% | |
TCAGCTTGACATAAACACTG+TGG | + | chr4_1:59329846-59329865 | Msa0560080:CDS | 40.0% | |
! | CCACCTTTTCGATAACATAC+CGG | - | chr4_1:59329952-59329971 | None:intergenic | 40.0% |
TTATCGAAAAGGTGGAGAGT+TGG | + | chr4_1:59329957-59329976 | Msa0560080:CDS | 40.0% | |
ACAGATGCCAATCTTGTTCT+CGG | + | chr4_1:59329985-59330004 | Msa0560080:CDS | 40.0% | |
GACATAACCGAGAACAAGAT+TGG | - | chr4_1:59329995-59330014 | None:intergenic | 40.0% | |
CATTTGGGCCAAATATGGAT+GGG | - | chr4_1:59330032-59330051 | None:intergenic | 40.0% | |
TCATTTGGGCCAAATATGGA+TGG | - | chr4_1:59330033-59330052 | None:intergenic | 40.0% | |
ATCCATATTTGGCCCAAATG+AGG | + | chr4_1:59330032-59330051 | Msa0560080:CDS | 40.0% | |
!! | CTTGTTGACTTGACATCAAG+AGG | - | chr4_1:59330063-59330082 | None:intergenic | 40.0% |
GAAGAATTTGAGAAGCTTGC+TGG | + | chr4_1:59330084-59330103 | Msa0560080:CDS | 40.0% | |
TCCATCTGCAAAAGACATGA+CGG | + | chr4_1:59330137-59330156 | Msa0560080:CDS | 40.0% | |
AGACAATGTGTCGTCCAATA+AGG | + | chr4_1:59330199-59330218 | Msa0560080:CDS | 40.0% | |
AAGGCAGTTGACTGAAATGA+AGG | + | chr4_1:59330218-59330237 | Msa0560080:CDS | 40.0% | |
AGGCAGTTGACTGAAATGAA+GGG | + | chr4_1:59330219-59330238 | Msa0560080:CDS | 40.0% | |
GTGCATGATTCTTTGTCTCA+TGG | - | chr4_1:59330245-59330264 | None:intergenic | 40.0% | |
AATCATGCACTTGCTTGCTT+TGG | + | chr4_1:59330255-59330274 | Msa0560080:CDS | 40.0% | |
TTCTTTCATACCTAGAGACC+TGG | - | chr4_1:59330313-59330332 | None:intergenic | 40.0% | |
! | TGTGGGATTTTAAGCGCTTA+TGG | + | chr4_1:59330351-59330370 | Msa0560080:CDS | 40.0% |
TGGAACTGAATCTACTCTTG+AGG | + | chr4_1:59330428-59330447 | Msa0560080:CDS | 40.0% | |
AACTCGGTAGCATAGTCAAA+TGG | - | chr4_1:59330615-59330634 | None:intergenic | 40.0% | |
CTGAAACAAGCTCACAAACT+CGG | - | chr4_1:59330631-59330650 | None:intergenic | 40.0% | |
GGCTTGTGGTCTCAATATAT+TGG | - | chr4_1:59330727-59330746 | None:intergenic | 40.0% | |
TTCAATTATAGGACTCCCAG+AGG | - | chr4_1:59330760-59330779 | None:intergenic | 40.0% | |
TCTGGGAGTCCTATAATTGA+AGG | + | chr4_1:59330759-59330778 | Msa0560080:CDS | 40.0% | |
! | TTACTTTGGAAATGGTTGGC+AGG | + | chr4_1:59330794-59330813 | Msa0560080:CDS | 40.0% |
GTGCTCTATTTGATCCTAAC+GGG | + | chr4_1:59331123-59331142 | Msa0560080:CDS | 40.0% | |
TGCTCTATTTGATCCTAACG+GGG | + | chr4_1:59331124-59331143 | Msa0560080:CDS | 40.0% | |
TACTAGACATTGCTCCTAGA+TGG | - | chr4_1:59331181-59331200 | None:intergenic | 40.0% | |
CAATGTCTAGTACAGTTCGT+TGG | + | chr4_1:59331189-59331208 | Msa0560080:CDS | 40.0% | |
TTCGTTGGCAACTCAATTAC+TGG | + | chr4_1:59331204-59331223 | Msa0560080:CDS | 40.0% | |
TCAAAGTCCATATTGGAGGA+AGG | + | chr4_1:59331410-59331429 | Msa0560080:CDS | 40.0% | |
!! | AAAAGGTGTCTTTCAGGAAG+AGG | + | chr4_1:59331463-59331482 | Msa0560080:CDS | 40.0% |
!! | AAAGGTGTCTTTCAGGAAGA+GGG | + | chr4_1:59331464-59331483 | Msa0560080:CDS | 40.0% |
CTTGTGCTTGCAAATCAGAT+AGG | - | chr4_1:59331568-59331587 | None:intergenic | 40.0% | |
CAAGTAGCAGCAAATCAAAG+AGG | + | chr4_1:59331584-59331603 | Msa0560080:CDS | 40.0% | |
AAGAGGAATTTGTCTAGTCC+TGG | + | chr4_1:59331601-59331620 | Msa0560080:CDS | 40.0% | |
TACGTACAGATGAATGCAGA+AGG | + | chr4_1:59331671-59331690 | Msa0560080:CDS | 40.0% | |
CTCTGTGACAATTGAAGAAG+AGG | + | chr4_1:59331754-59331773 | Msa0560080:CDS | 40.0% | |
!! | CTGAGCATTGACTCTAACAA+AGG | + | chr4_1:59331812-59331831 | Msa0560080:CDS | 40.0% |
TTACTGCATTCGCTGTTTAG+TGG | + | chr4_1:59331922-59331941 | Msa0560080:CDS | 40.0% | |
TACTATGAAACCATTGGAGG+TGG | + | chr4_1:59332160-59332179 | Msa0560080:CDS | 40.0% | |
TTGGACTTAGAATGAACAGC+GGG | + | chr4_1:59332299-59332318 | Msa0560080:CDS | 40.0% | |
AAAGAATGCTGACGGTAACT+GGG | - | chr4_1:59332381-59332400 | None:intergenic | 40.0% | |
AAGCGAAAGGTTTATCTTGG+TGG | + | chr4_1:59332484-59332503 | Msa0560080:CDS | 40.0% | |
TGGTGGTAAGAATTCTGTTG+AGG | + | chr4_1:59332501-59332520 | Msa0560080:CDS | 40.0% | |
!!! | TCTTCAGATTTTGACTCCTG+GGG | + | chr4_1:59332540-59332559 | Msa0560080:CDS | 40.0% |
GCACACTTATGACAACACAT+CGG | - | chr4_1:59332649-59332668 | None:intergenic | 40.0% | |
GTATCATGCGCAAATTAAGG+TGG | - | chr4_1:59332774-59332793 | None:intergenic | 40.0% | |
!! | CCTTAATTTGCGCATGATAC+GGG | + | chr4_1:59332774-59332793 | Msa0560080:three_prime_UTR | 40.0% |
GGTGCATCGTCATAGTTCAA+AGG | - | chr4_1:59328914-59328933 | None:intergenic | 45.0% | |
GATAAGGATGGGTACAACTG+TGG | + | chr4_1:59329021-59329040 | Msa0560080:CDS | 45.0% | |
!! | AATGCGCTTCTAGAGCGTAA+GGG | + | chr4_1:59329049-59329068 | Msa0560080:CDS | 45.0% |
!! | TTCTAGAGCGTAAGGGAGAA+AGG | + | chr4_1:59329056-59329075 | Msa0560080:CDS | 45.0% |
ATTGCTGTGTGTGTGACTAG+AGG | + | chr4_1:59329079-59329098 | Msa0560080:CDS | 45.0% | |
GGAGAAGGGAATTAGTTGTC+TGG | + | chr4_1:59329351-59329370 | Msa0560080:CDS | 45.0% | |
GAAGGGAATTAGTTGTCTGG+CGG | + | chr4_1:59329354-59329373 | Msa0560080:CDS | 45.0% | |
ATCATCTGCTTTGTCTCCCA+TGG | + | chr4_1:59329465-59329484 | Msa0560080:CDS | 45.0% | |
GCTAAGCCCCTCTTCAAATT+TGG | - | chr4_1:59329575-59329594 | None:intergenic | 45.0% | |
! | TGATATGGGAGGTACATCCA+CGG | + | chr4_1:59329750-59329769 | Msa0560080:CDS | 45.0% |
TGGAAGTTATGAGCAAGTGC+TGG | + | chr4_1:59329789-59329808 | Msa0560080:CDS | 45.0% | |
!! | CAACTTGAAAAGCACCGAAC+TGG | - | chr4_1:59329900-59329919 | None:intergenic | 45.0% |
!!! | CAGTTCGGTGCTTTTCAAGT+TGG | + | chr4_1:59329898-59329917 | Msa0560080:CDS | 45.0% |
! | CAAGTTGGACCAGAATCAGT+TGG | + | chr4_1:59329913-59329932 | Msa0560080:CDS | 45.0% |
TTCGATAACATACCGGACCT+GGG | - | chr4_1:59329945-59329964 | None:intergenic | 45.0% | |
TTTCGATAACATACCGGACC+TGG | - | chr4_1:59329946-59329965 | None:intergenic | 45.0% | |
GGTCCGGTATGTTATCGAAA+AGG | + | chr4_1:59329946-59329965 | Msa0560080:CDS | 45.0% | |
CCGGTATGTTATCGAAAAGG+TGG | + | chr4_1:59329949-59329968 | Msa0560080:CDS | 45.0% | |
GTCCTCATTTGGGCCAAATA+TGG | - | chr4_1:59330037-59330056 | None:intergenic | 45.0% | |
TATTTGGCCCAAATGAGGAC+CGG | + | chr4_1:59330037-59330056 | Msa0560080:CDS | 45.0% | |
! | TTGACTTGACATCAAGAGGC+CGG | - | chr4_1:59330059-59330078 | None:intergenic | 45.0% |
! | ACCGTCATGTCTTTTGCAGA+TGG | - | chr4_1:59330141-59330160 | None:intergenic | 45.0% |
!! | AGAGATTGCACTTGGCTTTG+TGG | + | chr4_1:59330164-59330183 | Msa0560080:CDS | 45.0% |
GCTATAGCACAAGCATGTTG+AGG | - | chr4_1:59330291-59330310 | None:intergenic | 45.0% | |
AACATGCTTGTGCTATAGCC+AGG | + | chr4_1:59330292-59330311 | Msa0560080:CDS | 45.0% | |
AAGCGCTTATGGAATGGGAT+TGG | + | chr4_1:59330362-59330381 | Msa0560080:CDS | 45.0% | |
GTTCCATAAACCGCAGCATA+AGG | - | chr4_1:59330414-59330433 | None:intergenic | 45.0% | |
ACACTGCCATCATGGTCAAA+AGG | + | chr4_1:59330568-59330587 | Msa0560080:CDS | 45.0% | |
! | GTTTGTGAGCTTGTTTCAGC+AGG | + | chr4_1:59330632-59330651 | Msa0560080:CDS | 45.0% |
! | AGCTTGTTTCAGCAGGAGTA+CGG | + | chr4_1:59330639-59330658 | Msa0560080:CDS | 45.0% |
GATGTTAGAGTTCGTGGTAC+AGG | + | chr4_1:59330696-59330715 | Msa0560080:CDS | 45.0% | |
AAGCTTGAAAAGCTGGGGTA+TGG | + | chr4_1:59330831-59330850 | Msa0560080:CDS | 45.0% | |
TACCGTTCATGACGATTGCT+GGG | - | chr4_1:59330872-59330891 | None:intergenic | 45.0% | |
TTACCGTTCATGACGATTGC+TGG | - | chr4_1:59330873-59330892 | None:intergenic | 45.0% | |
GCTCTATTTGATCCTAACGG+GGG | + | chr4_1:59331125-59331144 | Msa0560080:CDS | 45.0% | |
! | AAGGTGTCTTTCAGGAAGAG+GGG | + | chr4_1:59331465-59331484 | Msa0560080:CDS | 45.0% |
GATCTTAGTTCCACGGTCAT+CGG | - | chr4_1:59331519-59331538 | None:intergenic | 45.0% | |
TTCCTCGGATCTTAGTTCCA+CGG | - | chr4_1:59331526-59331545 | None:intergenic | 45.0% | |
AGAGAGATGCTGAAGTCAGT+TGG | + | chr4_1:59331701-59331720 | Msa0560080:CDS | 45.0% | |
GAAGAGGACTACATGGATGA+TGG | + | chr4_1:59331770-59331789 | Msa0560080:CDS | 45.0% | |
GGGACAAGTGCAGAAGTTTA+TGG | + | chr4_1:59331857-59331876 | Msa0560080:CDS | 45.0% | |
AATGACAGCTGCAGCTGTTA+CGG | - | chr4_1:59331903-59331922 | None:intergenic | 45.0% | |
TCCTCTCAATCAAGGCTGTT+TGG | + | chr4_1:59331955-59331974 | Msa0560080:CDS | 45.0% | |
GGAGAAAGAAATGAGCCTTC+TGG | - | chr4_1:59332001-59332020 | None:intergenic | 45.0% | |
ACTACAGCTGCACTATCACT+AGG | - | chr4_1:59332022-59332041 | None:intergenic | 45.0% | |
! | AGTGATAGTGCAGCTGTAGT+AGG | + | chr4_1:59332022-59332041 | Msa0560080:CDS | 45.0% |
!! | CGGTGATTCTCTGAGATGTA+AGG | - | chr4_1:59332057-59332076 | None:intergenic | 45.0% |
GGGTACTATGAAACCATTGG+AGG | + | chr4_1:59332157-59332176 | Msa0560080:CDS | 45.0% | |
AAACCATTGGAGGTGGAAGT+GGG | + | chr4_1:59332167-59332186 | Msa0560080:CDS | 45.0% | |
CCAAATCTGTGCAGAATCAC+TGG | - | chr4_1:59332283-59332302 | None:intergenic | 45.0% | |
CCAGTGATTCTGCACAGATT+TGG | + | chr4_1:59332280-59332299 | Msa0560080:CDS | 45.0% | |
TGGACTTAGAATGAACAGCG+GGG | + | chr4_1:59332300-59332319 | Msa0560080:CDS | 45.0% | |
GATTTCACAGAGGTGGTGAT+GGG | + | chr4_1:59332329-59332348 | Msa0560080:CDS | 45.0% | |
GAAAGAATGCTGACGGTAAC+TGG | - | chr4_1:59332382-59332401 | None:intergenic | 45.0% | |
TCTCTCGGAAAGAATGCTGA+CGG | - | chr4_1:59332389-59332408 | None:intergenic | 45.0% | |
! | AATTCTGTTGAGGTGCTTCC+AGG | + | chr4_1:59332511-59332530 | Msa0560080:CDS | 45.0% |
!!! | CTTCAGATTTTGACTCCTGG+GGG | + | chr4_1:59332541-59332560 | Msa0560080:CDS | 45.0% |
CCCGTATCATGCGCAAATTA+AGG | - | chr4_1:59332777-59332796 | None:intergenic | 45.0% | |
!! | TATAAACTAAAAAATATATT+GGG | - | chr4_1:59328618-59328637 | None:intergenic | 5.0% |
TCGGTTTCTTCGGAAACTGC+AGG | - | chr4_1:59328592-59328611 | None:intergenic | 50.0% | |
!! | AGGATGGGGAGTGTTACTGA+AGG | + | chr4_1:59328785-59328804 | Msa0560080:intron | 50.0% |
!! | GTAGGTATTTTCGAGCTGCG+CGG | - | chr4_1:59328986-59329005 | None:intergenic | 50.0% |
!! | CTTACGCTCTAGAAGCGCAT+TGG | - | chr4_1:59329050-59329069 | None:intergenic | 50.0% |
!! | CAATGCGCTTCTAGAGCGTA+AGG | + | chr4_1:59329048-59329067 | Msa0560080:CDS | 50.0% |
CAAATATACTCGGACGAGCC+TGG | - | chr4_1:59329132-59329151 | None:intergenic | 50.0% | |
TCCTCAGCATGAACAACAGG+TGG | + | chr4_1:59329402-59329421 | Msa0560080:CDS | 50.0% | |
TCCACCTGTTGTTCATGCTG+AGG | - | chr4_1:59329406-59329425 | None:intergenic | 50.0% | |
AGCATGAACAACAGGTGGAG+AGG | + | chr4_1:59329407-59329426 | Msa0560080:CDS | 50.0% | |
! | GAGAGGTTAGCGTTGAGTCT+GGG | + | chr4_1:59329424-59329443 | Msa0560080:CDS | 50.0% |
ACACTAGCTGTTAGACCACG+AGG | - | chr4_1:59329502-59329521 | None:intergenic | 50.0% | |
TCGTGGTCTAACAGCTAGTG+TGG | + | chr4_1:59329501-59329520 | Msa0560080:CDS | 50.0% | |
AATTGCTTTGTGCCCCGAGA+AGG | - | chr4_1:59329650-59329669 | None:intergenic | 50.0% | |
GGGCACAAAGCAATTCTGTC+TGG | + | chr4_1:59329655-59329674 | Msa0560080:CDS | 50.0% | |
AACCAACAACTCCACCAGCA+GGG | - | chr4_1:59329681-59329700 | None:intergenic | 50.0% | |
TAACCAACAACTCCACCAGC+AGG | - | chr4_1:59329682-59329701 | None:intergenic | 50.0% | |
!! | AGCATATCGACTCACATCCG+TGG | - | chr4_1:59329770-59329789 | None:intergenic | 50.0% |
ACGGATGTGAGTCGATATGC+TGG | + | chr4_1:59329769-59329788 | Msa0560080:CDS | 50.0% | |
GTGCTGGAAACCCAAATTGC+TGG | + | chr4_1:59329805-59329824 | Msa0560080:CDS | 50.0% | |
GACATAAACACTGTGGCTGC+TGG | + | chr4_1:59329853-59329872 | Msa0560080:CDS | 50.0% | |
ATAAACACTGTGGCTGCTGG+AGG | + | chr4_1:59329856-59329875 | Msa0560080:CDS | 50.0% | |
ACGGTCGAAGAGATTGCACT+TGG | + | chr4_1:59330156-59330175 | Msa0560080:CDS | 50.0% | |
CATGCACTTGCTTGCTTTGG+AGG | + | chr4_1:59330258-59330277 | Msa0560080:CDS | 50.0% | |
TGTGCTATAGCCAGGTCTCT+AGG | + | chr4_1:59330300-59330319 | Msa0560080:CDS | 50.0% | |
! | GAGCCTTATGCTGCGGTTTA+TGG | + | chr4_1:59330408-59330427 | Msa0560080:CDS | 50.0% |
AAGCCATAGAACCTGCCTCT+GGG | + | chr4_1:59330742-59330761 | Msa0560080:CDS | 50.0% | |
ATTATAGGACTCCCAGAGGC+AGG | - | chr4_1:59330756-59330775 | None:intergenic | 50.0% | |
GGGTATGGACATACGATGTC+TGG | + | chr4_1:59330846-59330865 | Msa0560080:CDS | 50.0% | |
TATGGGTATAGCCGAGCAGA+TGG | + | chr4_1:59331040-59331059 | Msa0560080:CDS | 50.0% | |
ATGGGTATAGCCGAGCAGAT+GGG | + | chr4_1:59331041-59331060 | Msa0560080:CDS | 50.0% | |
CAAAGTCCTTCCCATCTGCT+CGG | - | chr4_1:59331054-59331073 | None:intergenic | 50.0% | |
CGTGAGGTGCATTTGCAACT+AGG | - | chr4_1:59331151-59331170 | None:intergenic | 50.0% | |
GACATTGCTCCTAGATGGAC+AGG | - | chr4_1:59331176-59331195 | None:intergenic | 50.0% | |
GTTACTAACCATCCGTCAGC+CGG | + | chr4_1:59331257-59331276 | Msa0560080:CDS | 50.0% | |
ATCAGGAAGATGGCTACCTC+CGG | - | chr4_1:59331279-59331298 | None:intergenic | 50.0% | |
AGAGGCCATCATGCAGAGAT+AGG | + | chr4_1:59331356-59331375 | Msa0560080:CDS | 50.0% | |
GAGGCCATCATGCAGAGATA+GGG | + | chr4_1:59331357-59331376 | Msa0560080:CDS | 50.0% | |
AGGCCATCATGCAGAGATAG+GGG | + | chr4_1:59331358-59331377 | Msa0560080:CDS | 50.0% | |
TACCCCCTATCTCTGCATGA+TGG | - | chr4_1:59331364-59331383 | None:intergenic | 50.0% | |
!! | GAGATAGGGGGTATTACTCC+TGG | + | chr4_1:59331371-59331390 | Msa0560080:CDS | 50.0% |
! | GAAAATGGAGGCATGCTTCC+AGG | - | chr4_1:59331392-59331411 | None:intergenic | 50.0% |
CTTGAATCCTGCGAGTTCCT+CGG | - | chr4_1:59331541-59331560 | None:intergenic | 50.0% | |
GCCAAACAGCCTTGATTGAG+AGG | - | chr4_1:59331959-59331978 | None:intergenic | 50.0% | |
! | CAATCAAGGCTGTTTGGCTC+CGG | + | chr4_1:59331961-59331980 | Msa0560080:CDS | 50.0% |
GATAGTGCAGCTGTAGTAGG+AGG | + | chr4_1:59332025-59332044 | Msa0560080:CDS | 50.0% | |
GAAACCATTGGAGGTGGAAG+TGG | + | chr4_1:59332166-59332185 | Msa0560080:CDS | 50.0% | |
AACCATTGGAGGTGGAAGTG+GGG | + | chr4_1:59332168-59332187 | Msa0560080:CDS | 50.0% | |
GGACTTAGAATGAACAGCGG+GGG | + | chr4_1:59332301-59332320 | Msa0560080:CDS | 50.0% | |
! | GGAGATGGATTTCACAGAGG+TGG | + | chr4_1:59332322-59332341 | Msa0560080:CDS | 50.0% |
GGATTTCACAGAGGTGGTGA+TGG | + | chr4_1:59332328-59332347 | Msa0560080:CDS | 50.0% | |
ATGCTGAAATCCCGGGCCAT+CGG | + | chr4_1:59328855-59328874 | Msa0560080:CDS | 55.0% | |
AAATCCCGGGCCATCGGAAT+GGG | + | chr4_1:59328861-59328880 | Msa0560080:CDS | 55.0% | |
ACTATCCCATTCCGATGGCC+CGG | - | chr4_1:59328869-59328888 | None:intergenic | 55.0% | |
GAACTATGACGATGCACCGG+TGG | + | chr4_1:59328916-59328935 | Msa0560080:CDS | 55.0% | |
! | TATGACGATGCACCGGTGGA+AGG | + | chr4_1:59328920-59328939 | Msa0560080:CDS | 55.0% |
! | ATGACGATGCACCGGTGGAA+GGG | + | chr4_1:59328921-59328940 | Msa0560080:CDS | 55.0% |
! | ATGCACCGGTGGAAGGGATA+CGG | + | chr4_1:59328927-59328946 | Msa0560080:CDS | 55.0% |
ATCCTCCGTATCCCTTCCAC+CGG | - | chr4_1:59328935-59328954 | None:intergenic | 55.0% | |
GGAAGGGATACGGAGGATTC+TGG | + | chr4_1:59328937-59328956 | Msa0560080:CDS | 55.0% | |
! | GGAGAGGTTAGCGTTGAGTC+TGG | + | chr4_1:59329423-59329442 | Msa0560080:CDS | 55.0% |
CGAGGAACAGCACGAACCAT+GGG | - | chr4_1:59329484-59329503 | None:intergenic | 55.0% | |
ACGAGGAACAGCACGAACCA+TGG | - | chr4_1:59329485-59329504 | None:intergenic | 55.0% | |
! | ATGGTTCGTGCTGTTCCTCG+TGG | + | chr4_1:59329484-59329503 | Msa0560080:CDS | 55.0% |
!! | TGCGCCAGAGAGTACCTTCT+CGG | + | chr4_1:59329633-59329652 | Msa0560080:CDS | 55.0% |
! | GGGTGTGCTCCAACTGATTC+TGG | - | chr4_1:59329925-59329944 | None:intergenic | 55.0% |
GAATCAGTTGGAGCACACCC+AGG | + | chr4_1:59329925-59329944 | Msa0560080:CDS | 55.0% | |
CAAGAGGCCGGTCCTCATTT+GGG | - | chr4_1:59330047-59330066 | None:intergenic | 55.0% | |
TCAAGAGGCCGGTCCTCATT+TGG | - | chr4_1:59330048-59330067 | None:intergenic | 55.0% | |
!! | CTTGCTTGCTTTGGAGGTGC+TGG | + | chr4_1:59330264-59330283 | Msa0560080:CDS | 55.0% |
! | AGTGCAGGAGCCTTATGCTG+CGG | + | chr4_1:59330401-59330420 | Msa0560080:CDS | 55.0% |
AGGCACAGACACTGCCATCA+TGG | + | chr4_1:59330560-59330579 | Msa0560080:CDS | 55.0% | |
GAGGCAGGTTCTATGGCTTG+TGG | - | chr4_1:59330741-59330760 | None:intergenic | 55.0% | |
CAAGCCATAGAACCTGCCTC+TGG | + | chr4_1:59330741-59330760 | Msa0560080:CDS | 55.0% | |
ACTCCCAGAGGCAGGTTCTA+TGG | - | chr4_1:59330748-59330767 | None:intergenic | 55.0% | |
GGCCCAGCAATCGTCATGAA+CGG | + | chr4_1:59330867-59330886 | Msa0560080:CDS | 55.0% | |
GTATAGCCGAGCAGATGGGA+AGG | + | chr4_1:59331045-59331064 | Msa0560080:CDS | 55.0% | |
TTTGCAACTAGGCCCCCGTT+AGG | - | chr4_1:59331140-59331159 | None:intergenic | 55.0% | |
CCTAGATGGACAGGAACGTG+AGG | - | chr4_1:59331167-59331186 | None:intergenic | 55.0% | |
CCTCACGTTCCTGTCCATCT+AGG | + | chr4_1:59331164-59331183 | Msa0560080:CDS | 55.0% | |
GGCCATCATGCAGAGATAGG+GGG | + | chr4_1:59331359-59331378 | Msa0560080:CDS | 55.0% | |
GGCAGCTCCTTCCTCCAATA+TGG | - | chr4_1:59331420-59331439 | None:intergenic | 55.0% | |
GGAGGAAGGAGCTGCCATTA+AGG | + | chr4_1:59331424-59331443 | Msa0560080:CDS | 55.0% | |
TTCCACGGTCATCGGAGCTT+GGG | - | chr4_1:59331511-59331530 | None:intergenic | 55.0% | |
GACCGTGGAACTAAGATCCG+AGG | + | chr4_1:59331521-59331540 | Msa0560080:CDS | 55.0% | |
CTAAGATCCGAGGAACTCGC+AGG | + | chr4_1:59331531-59331550 | Msa0560080:CDS | 55.0% | |
CAGGCTTGTGCTTGTTCGCA+AGG | + | chr4_1:59332097-59332116 | Msa0560080:CDS | 55.0% | |
!! | AAGTGGGGCTGGTCCTACAT+GGG | + | chr4_1:59332183-59332202 | Msa0560080:CDS | 55.0% |
CTACATGGGAAGGGACCAGT+GGG | + | chr4_1:59332197-59332216 | Msa0560080:CDS | 55.0% | |
TACATGGGAAGGGACCAGTG+GGG | + | chr4_1:59332198-59332217 | Msa0560080:CDS | 55.0% | |
AGAATGAACAGCGGGGGAGA+TGG | + | chr4_1:59332307-59332326 | Msa0560080:CDS | 55.0% | |
! | GGGGGAGATGGATTTCACAG+AGG | + | chr4_1:59332319-59332338 | Msa0560080:CDS | 55.0% |
!! | AGGTGGTGATGGGCTTGTCA+GGG | + | chr4_1:59332339-59332358 | Msa0560080:CDS | 55.0% |
AGGTGCATGGACACGTCTCT+CGG | - | chr4_1:59332404-59332423 | None:intergenic | 55.0% | |
AGACGTGTCCATGCACCTAG+AGG | + | chr4_1:59332406-59332425 | Msa0560080:CDS | 55.0% | |
GACGTGTCCATGCACCTAGA+GGG | + | chr4_1:59332407-59332426 | Msa0560080:CDS | 55.0% | |
CATGCACCTAGAGGGCTGAA+GGG | + | chr4_1:59332415-59332434 | Msa0560080:CDS | 55.0% | |
!!! | CAGATTTTGACTCCTGGGGG+TGG | + | chr4_1:59332544-59332563 | Msa0560080:CDS | 55.0% |
!!! | ATTTTGACTCCTGGGGGTGG+TGG | + | chr4_1:59332547-59332566 | Msa0560080:CDS | 55.0% |
GAAATCCCGGGCCATCGGAA+TGG | + | chr4_1:59328860-59328879 | Msa0560080:CDS | 60.0% | |
CTATCCCATTCCGATGGCCC+GGG | - | chr4_1:59328868-59328887 | None:intergenic | 60.0% | |
!! | GCGCCAGAGAGTACCTTCTC+GGG | + | chr4_1:59329634-59329653 | Msa0560080:CDS | 60.0% |
!! | CGCCAGAGAGTACCTTCTCG+GGG | + | chr4_1:59329635-59329654 | Msa0560080:CDS | 60.0% |
!! | TGCCCCGAGAAGGTACTCTC+TGG | - | chr4_1:59329640-59329659 | None:intergenic | 60.0% |
GCAATTCTGTCTGGCCCTGC+TGG | + | chr4_1:59329664-59329683 | Msa0560080:CDS | 60.0% | |
ATTCTGTCTGGCCCTGCTGG+TGG | + | chr4_1:59329667-59329686 | Msa0560080:CDS | 60.0% | |
AACACTGTGGCTGCTGGAGG+TGG | + | chr4_1:59329859-59329878 | Msa0560080:CDS | 60.0% | |
AGTTGGAGCACACCCAGGTC+CGG | + | chr4_1:59329930-59329949 | Msa0560080:CDS | 60.0% | |
ACTAACCATCCGTCAGCCGG+AGG | + | chr4_1:59331260-59331279 | Msa0560080:CDS | 60.0% | |
AGATGGCTACCTCCGGCTGA+CGG | - | chr4_1:59331272-59331291 | None:intergenic | 60.0% | |
TTCCCAAGCTCCGATGACCG+TGG | + | chr4_1:59331506-59331525 | Msa0560080:CDS | 60.0% | |
GTTCCACGGTCATCGGAGCT+TGG | - | chr4_1:59331512-59331531 | None:intergenic | 60.0% | |
GCTGCAGCTGTTACGGCTTC+TGG | - | chr4_1:59331896-59331915 | None:intergenic | 60.0% | |
AGCCCCACTTCCACCTCCAA+TGG | - | chr4_1:59332173-59332192 | None:intergenic | 60.0% | |
ATTGGAGGTGGAAGTGGGGC+TGG | + | chr4_1:59332172-59332191 | Msa0560080:CDS | 60.0% | |
!! | GAAGTGGGGCTGGTCCTACA+TGG | + | chr4_1:59332182-59332201 | Msa0560080:CDS | 60.0% |
!! | GGGCTGGTCCTACATGGGAA+GGG | + | chr4_1:59332188-59332207 | Msa0560080:CDS | 60.0% |
CCACTGGTCCCTTCCCATGT+AGG | - | chr4_1:59332199-59332218 | None:intergenic | 60.0% | |
CCTACATGGGAAGGGACCAG+TGG | + | chr4_1:59332196-59332215 | Msa0560080:CDS | 60.0% | |
CATGTGGCACTGTACCCCAC+TGG | - | chr4_1:59332215-59332234 | None:intergenic | 60.0% | |
!! | GAGGTGGTGATGGGCTTGTC+AGG | + | chr4_1:59332338-59332357 | Msa0560080:CDS | 60.0% |
CCTTCAGCCCTCTAGGTGCA+TGG | - | chr4_1:59332417-59332436 | None:intergenic | 60.0% | |
CCATGCACCTAGAGGGCTGA+AGG | + | chr4_1:59332414-59332433 | Msa0560080:CDS | 60.0% | |
CACCTAGAGGGCTGAAGGGA+GGG | + | chr4_1:59332419-59332438 | Msa0560080:CDS | 60.0% | |
TTCCCTCCCTTCAGCCCTCT+AGG | - | chr4_1:59332424-59332443 | None:intergenic | 60.0% | |
GGATGGGGCTCTCCAGTGTA+AGG | + | chr4_1:59332568-59332587 | Msa0560080:CDS | 60.0% | |
CACCGGTGGAAGGGATACGG+AGG | + | chr4_1:59328930-59328949 | Msa0560080:CDS | 65.0% | |
GGCCCTGCTGGTGGAGTTGT+TGG | + | chr4_1:59329676-59329695 | Msa0560080:CDS | 65.0% | |
!! | GGGGCTGGTCCTACATGGGA+AGG | + | chr4_1:59332187-59332206 | Msa0560080:CDS | 65.0% |
GCACCTAGAGGGCTGAAGGG+AGG | + | chr4_1:59332418-59332437 | Msa0560080:CDS | 65.0% | |
GGGCTGAAGGGAGGGAACGA+CGG | + | chr4_1:59332427-59332446 | Msa0560080:CDS | 65.0% | |
!! | TGACTCCTGGGGGTGGTGGA+TGG | + | chr4_1:59332551-59332570 | Msa0560080:CDS | 65.0% |
!! | GACTCCTGGGGGTGGTGGAT+GGG | + | chr4_1:59332552-59332571 | Msa0560080:CDS | 65.0% |
!! | ACTCCTGGGGGTGGTGGATG+GGG | + | chr4_1:59332553-59332572 | Msa0560080:CDS | 65.0% |
GGCTACCTCCGGCTGACGGA+TGG | - | chr4_1:59331268-59331287 | None:intergenic | 70.0% | |
GGAGGGAACGACGGTGCACG+TGG | + | chr4_1:59332436-59332455 | Msa0560080:CDS | 70.0% | |
GAGCCCCATCCACCACCCCC+AGG | - | chr4_1:59332559-59332578 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_1 | gene | 59328412 | 59332815 | 59328412 | ID=Msa0560080;Name=Msa0560080 |
chr4_1 | mRNA | 59328412 | 59332815 | 59328412 | ID=Msa0560080-mRNA-1;Parent=Msa0560080;Name=Msa0560080-mRNA-1;_AED=0.00;_eAED=0.00;_QI=61|0|0.5|1|0|0.5|2|227|1266 |
chr4_1 | exon | 59328412 | 59328472 | 59328412 | ID=Msa0560080-mRNA-1:exon:18297;Parent=Msa0560080-mRNA-1 |
chr4_1 | exon | 59328788 | 59332815 | 59328788 | ID=Msa0560080-mRNA-1:exon:18298;Parent=Msa0560080-mRNA-1 |
chr4_1 | five_prime_UTR | 59328412 | 59328472 | 59328412 | ID=Msa0560080-mRNA-1:five_prime_utr;Parent=Msa0560080-mRNA-1 |
chr4_1 | CDS | 59328788 | 59332588 | 59328788 | ID=Msa0560080-mRNA-1:cds;Parent=Msa0560080-mRNA-1 |
chr4_1 | three_prime_UTR | 59332589 | 59332815 | 59332589 | ID=Msa0560080-mRNA-1:three_prime_utr;Parent=Msa0560080-mRNA-1 |
Gene Sequence |
Protein sequence |