Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0378980 | XP_003602787.1 | 96.296 | 540 | 20 | 0 | 1 | 540 | 1 | 540 | 0.0 | 1070 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0378980 | sp|Q8W475|SWI3A_ARATH | 49.353 | 541 | 234 | 11 | 1 | 534 | 1 | 508 | 7.74e-150 | 442 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0378980 | G7J3D7 | 96.296 | 540 | 20 | 0 | 1 | 540 | 1 | 540 | 0.0 | 1070 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0008090 | Msa0378980 | 0.800312 | 1.529032e-48 | -8.615850e-47 |
| Msa0008410 | Msa0378980 | 0.813025 | 3.153996e-51 | -8.615850e-47 |
| Msa0009760 | Msa0378980 | 0.800421 | 1.452460e-48 | -8.615850e-47 |
| Msa0029630 | Msa0378980 | 0.806552 | 7.780870e-50 | -8.615850e-47 |
| Msa0029710 | Msa0378980 | 0.810049 | 1.398417e-50 | -8.615850e-47 |
| Msa0044020 | Msa0378980 | 0.809736 | 1.632821e-50 | -8.615850e-47 |
| Msa0047980 | Msa0378980 | 0.808525 | 2.967724e-50 | -8.615850e-47 |
| Msa0069330 | Msa0378980 | 0.832677 | 8.249090e-56 | -8.615850e-47 |
| Msa0073670 | Msa0378980 | 0.844280 | 8.334947e-59 | -8.615850e-47 |
| Msa0076000 | Msa0378980 | 0.812860 | 3.428476e-51 | -8.615850e-47 |
| Msa0077200 | Msa0378980 | 0.846718 | 1.821288e-59 | -8.615850e-47 |
| Msa0078650 | Msa0378980 | 0.808551 | 2.929389e-50 | -8.615850e-47 |
| Msa0079920 | Msa0378980 | 0.806859 | 6.701963e-50 | -8.615850e-47 |
| Msa0097810 | Msa0378980 | 0.816483 | 5.403920e-52 | -8.615850e-47 |
| Msa0097840 | Msa0378980 | 0.801209 | 1.003239e-48 | -8.615850e-47 |
| Msa0104550 | Msa0378980 | 0.825322 | 4.992572e-54 | -8.615850e-47 |
| Msa0124990 | Msa0378980 | 0.845918 | 3.008422e-59 | -8.615850e-47 |
| Msa0125450 | Msa0378980 | 0.800962 | 1.126880e-48 | -8.615850e-47 |
| Msa0126370 | Msa0378980 | 0.800478 | 1.414353e-48 | -8.615850e-47 |
| Msa0140300 | Msa0378980 | 0.818648 | 1.756223e-52 | -8.615850e-47 |
| Msa0142950 | Msa0378980 | 0.810947 | 8.945666e-51 | -8.615850e-47 |
| Msa0144360 | Msa0378980 | 0.813451 | 2.543324e-51 | -8.615850e-47 |
| Msa0146260 | Msa0378980 | 0.802729 | 4.886623e-49 | -8.615850e-47 |
| Msa0146280 | Msa0378980 | 0.800933 | 1.142408e-48 | -8.615850e-47 |
| Msa0148100 | Msa0378980 | 0.810229 | 1.278658e-50 | -8.615850e-47 |
| Msa0150570 | Msa0378980 | 0.821976 | 3.031980e-53 | -8.615850e-47 |
| Msa0169610 | Msa0378980 | 0.820762 | 5.779688e-53 | -8.615850e-47 |
| Msa0171290 | Msa0378980 | 0.801954 | 7.055418e-49 | -8.615850e-47 |
| Msa0183830 | Msa0378980 | 0.801172 | 1.020832e-48 | -8.615850e-47 |
| Msa0185400 | Msa0378980 | 0.822506 | 2.283917e-53 | -8.615850e-47 |
| Msa0186890 | Msa0378980 | 0.808739 | 2.671091e-50 | -8.615850e-47 |
| Msa0199880 | Msa0378980 | 0.800225 | 1.592556e-48 | -8.615850e-47 |
| Msa0201500 | Msa0378980 | 0.803924 | 2.763551e-49 | -8.615850e-47 |
| Msa0205850 | Msa0378980 | 0.803903 | 2.791977e-49 | -8.615850e-47 |
| Msa0212930 | Msa0378980 | 0.820870 | 5.457522e-53 | -8.615850e-47 |
| Msa0376280 | Msa0378980 | 0.815656 | 8.267488e-52 | -8.615850e-47 |
| Msa0378980 | Msa0394400 | 0.810077 | 1.378980e-50 | -8.615850e-47 |
| Msa0378980 | Msa0402330 | 0.802812 | 4.697298e-49 | -8.615850e-47 |
| Msa0378980 | Msa0410500 | 0.800628 | 1.318276e-48 | -8.615850e-47 |
| Msa0378980 | Msa0410650 | 0.816893 | 4.373225e-52 | -8.615850e-47 |
| Msa0378980 | Msa0413450 | 0.816474 | 5.428538e-52 | -8.615850e-47 |
| Msa0378980 | Msa0426330 | 0.807677 | 4.497376e-50 | -8.615850e-47 |
| Msa0378980 | Msa0432070 | 0.811409 | 7.103222e-51 | -8.615850e-47 |
| Msa0378980 | Msa0433610 | 0.801775 | 7.678088e-49 | -8.615850e-47 |
| Msa0378980 | Msa0471590 | 0.804866 | 1.758528e-49 | -8.615850e-47 |
| Msa0378980 | Msa0474950 | 0.824630 | 7.275346e-54 | -8.615850e-47 |
| Msa0378980 | Msa0475790 | 0.814517 | 1.479776e-51 | -8.615850e-47 |
| Msa0378980 | Msa0484290 | 0.812483 | 4.143947e-51 | -8.615850e-47 |
| Msa0378980 | Msa0497030 | 0.806205 | 9.212073e-50 | -8.615850e-47 |
| Msa0378980 | Msa0507680 | 0.817271 | 3.596598e-52 | -8.615850e-47 |
| Msa0378980 | Msa0524500 | 0.825390 | 4.810939e-54 | -8.615850e-47 |
| Msa0378980 | Msa0541860 | 0.809606 | 1.741446e-50 | -8.615850e-47 |
| Msa0378980 | Msa0552810 | 0.829139 | 6.084671e-55 | -8.615850e-47 |
| Msa0378980 | Msa0557070 | 0.816681 | 4.878269e-52 | -8.615850e-47 |
| Msa0378980 | Msa0560080 | 0.814972 | 1.173157e-51 | -8.615850e-47 |
| Msa0378980 | Msa0560470 | 0.825141 | 5.510728e-54 | -8.615850e-47 |
| Msa0378980 | Msa0574890 | 0.824862 | 6.412332e-54 | -8.615850e-47 |
| Msa0378980 | Msa0581070 | 0.806421 | 8.293477e-50 | -8.615850e-47 |
| Msa0378980 | Msa0587940 | 0.801317 | 9.531682e-49 | -8.615850e-47 |
| Msa0378980 | Msa0591540 | 0.805801 | 1.119966e-49 | -8.615850e-47 |
| Msa0378980 | Msa0639120 | 0.809147 | 2.184557e-50 | -8.615850e-47 |
| Msa0378980 | Msa0641190 | 0.806026 | 1.004318e-49 | -8.615850e-47 |
| Msa0378980 | Msa0642720 | 0.822593 | 2.180687e-53 | -8.615850e-47 |
| Msa0378980 | Msa0658390 | 0.801550 | 8.538808e-49 | -8.615850e-47 |
| Msa0378980 | Msa0677290 | 0.819268 | 1.269727e-52 | -8.615850e-47 |
| Msa0378980 | Msa0681800 | 0.817893 | 2.603780e-52 | -8.615850e-47 |
| Msa0378980 | Msa0687630 | 0.820038 | 8.472582e-53 | -8.615850e-47 |
| Msa0378980 | Msa0689500 | 0.801733 | 7.835056e-49 | -8.615850e-47 |
| Msa0378980 | Msa0692080 | 0.800917 | 1.150882e-48 | -8.615850e-47 |
| Msa0378980 | Msa0692840 | 0.835131 | 2.005904e-56 | -8.615850e-47 |
| Msa0378980 | Msa0692940 | 0.801332 | 9.465451e-49 | -8.615850e-47 |
| Msa0378980 | Msa0699360 | 0.817499 | 3.195712e-52 | -8.615850e-47 |
| Msa0378980 | Msa0702570 | 0.801653 | 8.134334e-49 | -8.615850e-47 |
| Msa0378980 | Msa0703230 | 0.807817 | 4.199334e-50 | -8.615850e-47 |
| Msa0378980 | Msa0713820 | 0.827341 | 1.650301e-54 | -8.615850e-47 |
| Msa0378980 | Msa0724000 | 0.830303 | 3.167690e-55 | -8.615850e-47 |
| Msa0378980 | Msa0734960 | 0.830677 | 2.567236e-55 | -8.615850e-47 |
| Msa0378980 | Msa0743800 | 0.801237 | 9.898182e-49 | -8.615850e-47 |
| Msa0378980 | Msa0750880 | 0.818548 | 1.851118e-52 | -8.615850e-47 |
| Msa0378980 | Msa0750920 | 0.820577 | 6.374445e-53 | -8.615850e-47 |
| Msa0378980 | Msa0752510 | 0.822981 | 1.770830e-53 | -8.615850e-47 |
| Msa0378980 | Msa0753460 | 0.807733 | 4.376605e-50 | -8.615850e-47 |
| Msa0378980 | Msa0755340 | 0.824311 | 8.644328e-54 | -8.615850e-47 |
| Msa0378980 | Msa0756060 | 0.810524 | 1.104627e-50 | -8.615850e-47 |
| Msa0378980 | Msa0763020 | 0.813182 | 2.913450e-51 | -8.615850e-47 |
| Msa0378980 | Msa0763070 | 0.809925 | 1.486942e-50 | -8.615850e-47 |
| Msa0378980 | Msa0778320 | 0.804007 | 2.655818e-49 | -8.615850e-47 |
| Msa0378980 | Msa0786270 | 0.809816 | 1.569607e-50 | -8.615850e-47 |
| Msa0378980 | Msa0787750 | 0.815642 | 8.327406e-52 | -8.615850e-47 |
| Msa0378980 | Msa0788770 | 0.821144 | 4.720875e-53 | -8.615850e-47 |
| Msa0378980 | Msa0790400 | 0.801846 | 7.426298e-49 | -8.615850e-47 |
| Msa0378980 | Msa0797750 | 0.828351 | 9.433689e-55 | -8.615850e-47 |
| Msa0378980 | Msa0823090 | 0.816264 | 6.047858e-52 | -8.615850e-47 |
| Msa0378980 | Msa0824640 | 0.824653 | 7.185052e-54 | -8.615850e-47 |
| Msa0378980 | Msa0832700 | 0.811990 | 5.310747e-51 | -8.615850e-47 |
| Msa0378980 | Msa0835280 | 0.839341 | 1.678740e-57 | -8.615850e-47 |
| Msa0378980 | Msa0863870 | 0.808908 | 2.458230e-50 | -8.615850e-47 |
| Msa0378980 | Msa0864010 | 0.830508 | 2.823219e-55 | -8.615850e-47 |
| Msa0378980 | Msa0869100 | 0.806353 | 8.570281e-50 | -8.615850e-47 |
| Msa0378980 | Msa0888940 | 0.822753 | 2.001148e-53 | -8.615850e-47 |
| Msa0378980 | Msa0898760 | 0.813803 | 2.127150e-51 | -8.615850e-47 |
| Msa0378980 | Msa0930780 | 0.830734 | 2.485168e-55 | -8.615850e-47 |
| Msa0378980 | Msa0943170 | 0.817788 | 2.749447e-52 | -8.615850e-47 |
| Msa0378980 | Msa0967370 | 0.806113 | 9.630798e-50 | -8.615850e-47 |
| Msa0378980 | Msa0976330 | 0.801258 | 9.803338e-49 | -8.615850e-47 |
| Msa0378980 | Msa0986920 | 0.821409 | 4.099665e-53 | -8.615850e-47 |
| Msa0378980 | Msa1009750 | 0.803344 | 3.646172e-49 | -8.615850e-47 |
| Msa0378980 | Msa1049510 | -0.803928 | 2.758559e-49 | -8.615850e-47 |
| Msa0378980 | Msa1059960 | 0.817161 | 3.806589e-52 | -8.615850e-47 |
| Msa0378980 | Msa1063950 | 0.829598 | 4.706163e-55 | -8.615850e-47 |
| Msa0378980 | Msa1085200 | 0.812932 | 3.305908e-51 | -8.615850e-47 |
| Msa0378980 | Msa1097820 | 0.803681 | 3.104397e-49 | -8.615850e-47 |
| Msa0378980 | Msa1099910 | 0.813036 | 3.135921e-51 | -8.615850e-47 |
| Msa0378980 | Msa1105160 | 0.802865 | 4.580611e-49 | -8.615850e-47 |
| Msa0378980 | Msa1108160 | 0.801875 | 7.325263e-49 | -8.615850e-47 |
| Msa0378980 | Msa1119200 | 0.804838 | 1.782127e-49 | -8.615850e-47 |
| Msa0378980 | Msa1125550 | 0.805138 | 1.542366e-49 | -8.615850e-47 |
| Msa0378980 | Msa1126770 | 0.804449 | 2.148984e-49 | -8.615850e-47 |
| Msa0378980 | Msa1127890 | 0.804005 | 2.658048e-49 | -8.615850e-47 |
| Msa0378980 | Msa1139810 | 0.800797 | 1.217848e-48 | -8.615850e-47 |
| Msa0378980 | Msa1140690 | 0.810442 | 1.150412e-50 | -8.615850e-47 |
| Msa0378980 | Msa1157870 | 0.803455 | 3.458187e-49 | -8.615850e-47 |
| Msa0378980 | Msa1174100 | 0.806966 | 6.364208e-50 | -8.615850e-47 |
| Msa0378980 | Msa1174530 | 0.803457 | 3.454965e-49 | -8.615850e-47 |
| Msa0378980 | Msa1175330 | 0.814833 | 1.259470e-51 | -8.615850e-47 |
| Msa0378980 | Msa1183660 | 0.811123 | 8.193807e-51 | -8.615850e-47 |
| Msa0378980 | Msa1185540 | 0.813228 | 2.846907e-51 | -8.615850e-47 |
| Msa0378980 | Msa1186800 | 0.821166 | 4.664759e-53 | -8.615850e-47 |
| Msa0378980 | Msa1214020 | 0.800602 | 1.334749e-48 | -8.615850e-47 |
| Msa0378980 | Msa1214890 | 0.806608 | 7.574125e-50 | -8.615850e-47 |
| Msa0378980 | Msa1224830 | 0.806365 | 8.523262e-50 | -8.615850e-47 |
| Msa0378980 | Msa1227690 | 0.814250 | 1.695002e-51 | -8.615850e-47 |
| Msa0378980 | Msa1228890 | 0.853382 | 2.479805e-61 | -8.615850e-47 |
| Msa0378980 | Msa1235250 | 0.803055 | 4.184263e-49 | -8.615850e-47 |
| Msa0378980 | Msa1252190 | 0.850099 | 2.113874e-60 | -8.615850e-47 |
| Msa0378980 | Msa1254710 | 0.813346 | 2.681744e-51 | -8.615850e-47 |
| Msa0378980 | Msa1255410 | 0.814099 | 1.830589e-51 | -8.615850e-47 |
| Msa0378980 | Msa1270630 | 0.801229 | 9.937591e-49 | -8.615850e-47 |
| Msa0378980 | Msa1271580 | 0.802120 | 6.521466e-49 | -8.615850e-47 |
| Msa0378980 | Msa1274280 | 0.813690 | 2.252995e-51 | -8.615850e-47 |
| Msa0378980 | Msa1280560 | 0.835022 | 2.136840e-56 | -8.615850e-47 |
| Msa0378980 | Msa1283990 | 0.812148 | 4.904348e-51 | -8.615850e-47 |
| Msa0378980 | Msa1292830 | 0.836669 | 8.171908e-57 | -8.615850e-47 |
| Msa0378980 | Msa1299360 | 0.806850 | 6.733730e-50 | -8.615850e-47 |
| Msa0378980 | Msa1303250 | 0.811249 | 7.695257e-51 | -8.615850e-47 |
| Msa0378980 | Msa1306990 | 0.802775 | 4.779577e-49 | -8.615850e-47 |
| Msa0378980 | Msa1307950 | 0.809039 | 2.304426e-50 | -8.615850e-47 |
| Msa0378980 | Msa1323050 | 0.801602 | 8.334229e-49 | -8.615850e-47 |
| Msa0378980 | Msa1341070 | 0.805235 | 1.472167e-49 | -8.615850e-47 |
| Msa0378980 | Msa1353060 | 0.820703 | 5.963625e-53 | -8.615850e-47 |
| Msa0378980 | Msa1356610 | 0.832165 | 1.104469e-55 | -8.615850e-47 |
| Msa0378980 | Msa1365150 | 0.806884 | 6.622295e-50 | -8.615850e-47 |
| Msa0378980 | Msa1367590 | 0.823750 | 1.170454e-53 | -8.615850e-47 |
| Msa0378980 | Msa1367880 | 0.815562 | 8.677030e-52 | -8.615850e-47 |
| Msa0378980 | Msa1373330 | 0.802675 | 5.014007e-49 | -8.615850e-47 |
| Msa0378980 | Msa1374040 | 0.802884 | 4.539635e-49 | -8.615850e-47 |
| Msa0378980 | Msa1376650 | 0.813493 | 2.488784e-51 | -8.615850e-47 |
| Msa0378980 | Msa1377800 | 0.800824 | 1.202032e-48 | -8.615850e-47 |
| Msa0378980 | Msa1386230 | 0.809544 | 1.795658e-50 | -8.615850e-47 |
| Msa0378980 | Msa1397940 | 0.822714 | 2.043582e-53 | -8.615850e-47 |
| Msa0378980 | Msa1404190 | 0.813068 | 3.086531e-51 | -8.615850e-47 |
| Msa0378980 | Msa1404730 | 0.811821 | 5.777920e-51 | -8.615850e-47 |
| Msa0378980 | Msa1406040 | 0.814619 | 1.404912e-51 | -8.615850e-47 |
| Msa0378980 | Msa1427060 | 0.814686 | 1.357644e-51 | -8.615850e-47 |
| Msa0378980 | Msa1443300 | 0.805741 | 1.152865e-49 | -8.615850e-47 |
| Msa0378980 | Msa1443930 | 0.801273 | 9.733287e-49 | -8.615850e-47 |
| Msa0378980 | Msa1459180 | 0.813289 | 2.759313e-51 | -8.615850e-47 |
| Msa0241800 | Msa0378980 | 0.800380 | 1.481029e-48 | -8.615850e-47 |
| Msa0242230 | Msa0378980 | 0.806832 | 6.793549e-50 | -8.615850e-47 |
| Msa0259370 | Msa0378980 | 0.800496 | 1.402210e-48 | -8.615850e-47 |
| Msa0260620 | Msa0378980 | 0.804707 | 1.898334e-49 | -8.615850e-47 |
| Msa0294160 | Msa0378980 | 0.806232 | 9.091681e-50 | -8.615850e-47 |
| Msa0300120 | Msa0378980 | 0.801181 | 1.016420e-48 | -8.615850e-47 |
| Msa0307850 | Msa0378980 | 0.817675 | 2.916219e-52 | -8.615850e-47 |
| Msa0321190 | Msa0378980 | 0.800811 | 1.209742e-48 | -8.615850e-47 |
| Msa0330310 | Msa0378980 | 0.800232 | 1.586957e-48 | -8.615850e-47 |
| Msa0333920 | Msa0378980 | 0.810164 | 1.320746e-50 | -8.615850e-47 |
| Msa0334040 | Msa0378980 | 0.827890 | 1.218584e-54 | -8.615850e-47 |
| Msa0355270 | Msa0378980 | 0.814629 | 1.397449e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0378980 | MtrunA17_Chr3g0132021 | 96.296 | 540 | 20 | 0 | 1 | 540 | 1 | 540 | 0.0 | 1070 |
| Msa0378980 | MtrunA17_Chr3g0144301 | 27.757 | 526 | 261 | 11 | 9 | 523 | 50 | 467 | 6.48e-56 | 195 |
| Msa0378980 | MtrunA17_Chr5g0438861 | 27.238 | 525 | 245 | 11 | 7 | 523 | 22 | 417 | 5.65e-50 | 177 |
| Msa0378980 | MtrunA17_Chr3g0124951 | 27.072 | 543 | 325 | 15 | 15 | 525 | 170 | 673 | 1.52e-43 | 165 |
| Msa0378980 | MtrunA17_Chr4g0034851 | 29.693 | 293 | 164 | 7 | 16 | 290 | 139 | 407 | 3.12e-30 | 125 |
| Msa0378980 | MtrunA17_Chr6g0470201 | 40.000 | 130 | 72 | 1 | 2 | 131 | 17 | 140 | 2.16e-25 | 102 |
| Msa0378980 | MtrunA17_Chr6g0470211 | 42.045 | 88 | 48 | 1 | 207 | 294 | 8 | 92 | 3.63e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0378980 | AT2G47620.1 | 49.353 | 541 | 234 | 11 | 1 | 534 | 1 | 508 | 7.87e-151 | 442 |
| Msa0378980 | AT2G47620.2 | 50.361 | 415 | 167 | 9 | 1 | 410 | 1 | 381 | 5.54e-120 | 360 |
| Msa0378980 | AT2G33610.1 | 26.145 | 524 | 282 | 10 | 7 | 527 | 39 | 460 | 5.19e-52 | 184 |
| Msa0378980 | AT1G21700.1 | 26.866 | 536 | 321 | 17 | 15 | 527 | 175 | 662 | 1.29e-46 | 174 |
| Msa0378980 | AT4G34430.4 | 27.027 | 296 | 177 | 4 | 15 | 295 | 144 | 415 | 2.80e-26 | 114 |
| Msa0378980 | AT4G34430.3 | 27.027 | 296 | 177 | 4 | 15 | 295 | 144 | 415 | 2.84e-26 | 114 |
| Msa0378980 | AT4G34430.2 | 27.027 | 296 | 177 | 4 | 15 | 295 | 144 | 415 | 2.90e-26 | 114 |
| Msa0378980 | AT4G34430.1 | 27.027 | 296 | 177 | 4 | 15 | 295 | 144 | 415 | 2.90e-26 | 114 |
Find 129 sgRNAs with CRISPR-Local
Find 448 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTATATTCTTTGTAGATTT+TGG | 0.062137 | 3_1:-79873051 | None:intergenic |
| GAAATAGGCTTCAACGAATT+TGG | 0.175854 | 3_1:-79873323 | None:intergenic |
| TCGAGTTCTGAATCTGAAAT+TGG | 0.191544 | 3_1:-79872794 | None:intergenic |
| ATGGTGGTGGTGCTGGGAAC+GGG | 0.237926 | 3_1:+79873372 | Msa0378980:CDS |
| AACTCATTGAGCTGCCCTTT+GGG | 0.243008 | 3_1:+79874941 | Msa0378980:CDS |
| GTTCAATCTCTCTATCTTCT+TGG | 0.261575 | 3_1:-79877794 | None:intergenic |
| CACTATTACTGTTATCATTT+CGG | 0.270449 | 3_1:-79874987 | None:intergenic |
| CCTGTGTCATTGAAGTTTCT+TGG | 0.272832 | 3_1:-79875062 | None:intergenic |
| CTGCCATTGGAACGGCTCTT+GGG | 0.282371 | 3_1:+79877739 | Msa0378980:CDS |
| GTATCCCGCGGCAACGAAAT+AGG | 0.302183 | 3_1:-79873338 | None:intergenic |
| CGCCTTCTGCTGGCGACGGT+GGG | 0.320218 | 3_1:+79873216 | Msa0378980:CDS |
| AGTTCCACTGATTGATTAAT+AGG | 0.320826 | 3_1:+79872681 | Msa0378980:intron |
| GATAACAGTAATAGTGTTAC+TGG | 0.321482 | 3_1:+79874994 | Msa0378980:CDS |
| CCCTTTGGGGAGCTCATGTT+AGG | 0.346283 | 3_1:+79874955 | Msa0378980:CDS |
| GCTGCCATTGGAACGGCTCT+TGG | 0.353657 | 3_1:+79877738 | Msa0378980:CDS |
| GATGGTGGTGGTGCTGGGAA+CGG | 0.363496 | 3_1:+79873371 | Msa0378980:CDS |
| TGTGGTGATAAATGTGGTTC+TGG | 0.370702 | 3_1:+79873479 | Msa0378980:CDS |
| AAACTCATTGAGCTGCCCTT+TGG | 0.381346 | 3_1:+79874940 | Msa0378980:CDS |
| ATTGCTGATGGTGGTGGTGC+TGG | 0.391147 | 3_1:+79873365 | Msa0378980:CDS |
| GTTGAGGAAGGTGCTCCTAA+TGG | 0.394494 | 3_1:+79873281 | Msa0378980:CDS |
| AACTACGGCGCGCCTTCTGC+TGG | 0.398256 | 3_1:+79873206 | Msa0378980:CDS |
| TGAATGAAAATCCTTCAAAA+AGG | 0.402501 | 3_1:+79875133 | Msa0378980:CDS |
| TTAAATCTGGTGTCGCTAGA+TGG | 0.405889 | 3_1:+79878104 | Msa0378980:CDS |
| GCTGCAGCAGCTGTGATATG+AGG | 0.409519 | 3_1:-79875680 | None:intergenic |
| TGCTGGCGACGGTGGGGAAG+CGG | 0.411672 | 3_1:+79873223 | Msa0378980:CDS |
| AGCAACTATAATTGATGCTC+AGG | 0.419562 | 3_1:+79877824 | Msa0378980:CDS |
| GTGAATGTTAACCTTCTAGA+AGG | 0.426633 | 3_1:-79873104 | None:intergenic |
| CTGCTTCATTAGTGAACTGC+TGG | 0.426983 | 3_1:-79875181 | None:intergenic |
| GCGCCTTCTGCTGGCGACGG+TGG | 0.430832 | 3_1:+79873215 | Msa0378980:CDS |
| CGACGGTGGGGAAGCGGAGA+AGG | 0.431819 | 3_1:+79873229 | Msa0378980:CDS |
| TGAGTGTATTTGTATAGTTA+TGG | 0.432236 | 3_1:+79878163 | Msa0378980:three_prime_UTR |
| GGTGGTGCTGGGAACGGGGT+TGG | 0.433948 | 3_1:+79873377 | Msa0378980:CDS |
| GCGTCGTATTCAGATGTTTA+CGG | 0.434942 | 3_1:+79873419 | Msa0378980:CDS |
| GGAGAAGGAACACGCTGAAA+TGG | 0.441692 | 3_1:+79878027 | Msa0378980:CDS |
| CGAGTTCTGAATCTGAAATT+GGG | 0.442640 | 3_1:-79872793 | None:intergenic |
| TTGAGGAAGGTGCTCCTAAT+GGG | 0.445261 | 3_1:+79873282 | Msa0378980:CDS |
| GTGCCAACCACAGTGCTGTC+TGG | 0.448500 | 3_1:+79874809 | Msa0378980:CDS |
| AGAGGAGCGGTGTAAGTTGA+AGG | 0.454875 | 3_1:+79873259 | Msa0378980:CDS |
| TGATTTGATTCGACGTAAAG+AGG | 0.456139 | 3_1:+79873442 | Msa0378980:CDS |
| AGTGCTTACTTGAAGAGCTT+GGG | 0.458213 | 3_1:-79872829 | None:intergenic |
| GCAACAACACGAATCCCATT+AGG | 0.458762 | 3_1:-79873296 | None:intergenic |
| GGCTGAAGGTTTAGAGTTGG+TGG | 0.462309 | 3_1:+79875919 | Msa0378980:CDS |
| GAGTGCTTACTTGAAGAGCT+TGG | 0.465034 | 3_1:-79872830 | None:intergenic |
| TTGTGGAAGACATTTAAATC+TGG | 0.466428 | 3_1:+79878091 | Msa0378980:CDS |
| GAACAATGGAAACAAAGTTC+AGG | 0.466829 | 3_1:+79875023 | Msa0378980:CDS |
| TCAACATCAAATATATCCCT+TGG | 0.467931 | 3_1:-79875743 | None:intergenic |
| ACCGCGAAGAACCTTCTAGA+AGG | 0.469681 | 3_1:+79873093 | Msa0378980:CDS |
| TGGTGTTAAGATTGCGCCGT+TGG | 0.478334 | 3_1:+79873397 | Msa0378980:CDS |
| CGTTGGGGTTTGATTAACTA+CGG | 0.479443 | 3_1:+79873191 | Msa0378980:CDS |
| GTCAGGGCTCTCGAGGCTGA+AGG | 0.483976 | 3_1:+79875905 | Msa0378980:intron |
| CATTGAAGTTTCTTGGTGAT+CGG | 0.484104 | 3_1:-79875055 | None:intergenic |
| TCCATGCTAAAATGCGGAGG+AGG | 0.484828 | 3_1:-79872758 | None:intergenic |
| ACGGGAATTATGGGGAGAAA+AGG | 0.485836 | 3_1:+79874746 | Msa0378980:CDS |
| AATACATTCAAGTTTAGTCT+TGG | 0.490532 | 3_1:-79874914 | None:intergenic |
| GTGGAGGGGTCCACTCAATC+AGG | 0.490583 | 3_1:+79875938 | Msa0378980:CDS |
| GAAGGTTTAGAGTTGGTGGA+GGG | 0.491085 | 3_1:+79875923 | Msa0378980:CDS |
| TGATATCATTCTGATAAGTA+CGG | 0.499460 | 3_1:+79878215 | Msa0378980:three_prime_UTR |
| TCCCCACCGTCGCCAGCAGA+AGG | 0.500105 | 3_1:-79873218 | None:intergenic |
| GGCGCGCCTTCTGCTGGCGA+CGG | 0.505683 | 3_1:+79873212 | Msa0378980:CDS |
| TGCTGCACGAGCAAAGTTGT+TGG | 0.507153 | 3_1:+79877767 | Msa0378980:CDS |
| CACAGTGCTGTCTGGACTGA+GGG | 0.511681 | 3_1:+79874817 | Msa0378980:CDS |
| ATTTAATTTGAAATCCTCCA+TGG | 0.517576 | 3_1:-79874770 | None:intergenic |
| TGAAGGTTTAGAGTTGGTGG+AGG | 0.519149 | 3_1:+79875922 | Msa0378980:CDS |
| CAGCAGTTCACTAATGAAGC+AGG | 0.523188 | 3_1:+79875182 | Msa0378980:CDS |
| CGACGTAAAGAGGTCAATTG+TGG | 0.526288 | 3_1:+79873452 | Msa0378980:CDS |
| GACGTAAAGAGGTCAATTGT+GGG | 0.526317 | 3_1:+79873453 | Msa0378980:CDS |
| CAACATCAAATATATCCCTT+GGG | 0.527017 | 3_1:-79875742 | None:intergenic |
| TGCCATTGGAACGGCTCTTG+GGG | 0.528099 | 3_1:+79877740 | Msa0378980:CDS |
| GCTCTTATACGTAGTGTCAA+TGG | 0.528104 | 3_1:-79877717 | None:intergenic |
| CGAGGCTGAAGGTTTAGAGT+TGG | 0.530195 | 3_1:+79875916 | Msa0378980:CDS |
| TGGTGGTGGTGCTGGGAACG+GGG | 0.530701 | 3_1:+79873373 | Msa0378980:CDS |
| TTGCTGATGGTGGTGGTGCT+GGG | 0.533217 | 3_1:+79873366 | Msa0378980:CDS |
| GAAGCCTATTTCGTTGCCGC+GGG | 0.539844 | 3_1:+79873334 | Msa0378980:CDS |
| GTGATGAGAATTCGCTCCCA+AGG | 0.542135 | 3_1:+79875726 | Msa0378980:CDS |
| GCCTTCTGCTGGCGACGGTG+GGG | 0.549080 | 3_1:+79873217 | Msa0378980:CDS |
| TGCACGAGCAAAGTTGTTGG+CGG | 0.551025 | 3_1:+79877770 | Msa0378980:CDS |
| GGTTGAGAAGTTGCAACAGA+AGG | 0.551352 | 3_1:+79877973 | Msa0378980:intron |
| GGATATATTTGATGTTGAAG+AGG | 0.561648 | 3_1:+79875748 | Msa0378980:CDS |
| ACCTTCTAGAAGGTTCTTCG+CGG | 0.561766 | 3_1:-79873094 | None:intergenic |
| AGCGGAGAAGGAACATGAAG+AGG | 0.562741 | 3_1:+79873241 | Msa0378980:CDS |
| GCGGTGTAAGTTGAAGGTTG+AGG | 0.565042 | 3_1:+79873265 | Msa0378980:CDS |
| CCATGCTAAAATGCGGAGGA+GGG | 0.565736 | 3_1:-79872757 | None:intergenic |
| CTGCAGCAGCTGTGATATGA+GGG | 0.565802 | 3_1:-79875679 | None:intergenic |
| ACTCATTGAGCTGCCCTTTG+GGG | 0.569298 | 3_1:+79874942 | Msa0378980:CDS |
| ACGAAGATTGCTGATGGTGG+TGG | 0.574323 | 3_1:+79873359 | Msa0378980:CDS |
| AGCCCCAAGAGCCGTTCCAA+TGG | 0.577527 | 3_1:-79877742 | None:intergenic |
| CCTAACATGAGCTCCCCAAA+GGG | 0.577653 | 3_1:-79874955 | None:intergenic |
| TGACGTCACTTTCTTGAACA+AGG | 0.580657 | 3_1:+79873151 | Msa0378980:CDS |
| TTTGTATAGTTATGGTTCTG+TGG | 0.585245 | 3_1:+79878171 | Msa0378980:three_prime_UTR |
| ACATCTGAATACGACGCCAA+CGG | 0.587937 | 3_1:-79873413 | None:intergenic |
| TCCACTGATTGATTAATAGG+TGG | 0.588276 | 3_1:+79872684 | Msa0378980:five_prime_UTR |
| CTACGTATAAGAGCTGCCAT+TGG | 0.589808 | 3_1:+79877726 | Msa0378980:CDS |
| AAGGTTTAGAGTTGGTGGAG+GGG | 0.591381 | 3_1:+79875924 | Msa0378980:CDS |
| CATGCTAAAATGCGGAGGAG+GGG | 0.592057 | 3_1:-79872756 | None:intergenic |
| AAGATTCTATCTTAACTGAA+CGG | 0.593295 | 3_1:+79878059 | Msa0378980:CDS |
| TATCTTTGTCAGGGCTCTCG+AGG | 0.594795 | 3_1:+79875898 | Msa0378980:intron |
| TGATGAGAATTCGCTCCCAA+GGG | 0.601664 | 3_1:+79875727 | Msa0378980:CDS |
| TGAAGCCTATTTCGTTGCCG+CGG | 0.604522 | 3_1:+79873333 | Msa0378980:CDS |
| GCCTAACATGAGCTCCCCAA+AGG | 0.608377 | 3_1:-79874956 | None:intergenic |
| CCAAGAAACTTCAATGACAC+AGG | 0.608710 | 3_1:+79875062 | Msa0378980:CDS |
| TGGACATTACCGAAGTAGCA+AGG | 0.608925 | 3_1:+79873499 | Msa0378980:CDS |
| CTGAACGGATTGATGTGTTG+TGG | 0.610213 | 3_1:+79878074 | Msa0378980:CDS |
| TTTGAAGCATGGGGATGACT+GGG | 0.610350 | 3_1:+79874867 | Msa0378980:CDS |
| GGTGGGACTGCTCTCAACTG+TGG | 0.615676 | 3_1:+79875652 | Msa0378980:intron |
| GAGGTCAATTGTGGGAATTG+TGG | 0.618187 | 3_1:+79873461 | Msa0378980:CDS |
| GAGCCTTCCATGCTAAAATG+CGG | 0.623345 | 3_1:-79872764 | None:intergenic |
| TATAAGAGCTGCCATTGGAA+CGG | 0.624681 | 3_1:+79877731 | Msa0378980:CDS |
| CGGGATACGAAGATTGCTGA+TGG | 0.626607 | 3_1:+79873353 | Msa0378980:CDS |
| CCACAGTGCTGTCTGGACTG+AGG | 0.629638 | 3_1:+79874816 | Msa0378980:CDS |
| TCTCTAAAATCTTAGAGACA+AGG | 0.630334 | 3_1:+79878139 | Msa0378980:exon |
| TTATGGGGAGAAAAGGTCCA+TGG | 0.637503 | 3_1:+79874753 | Msa0378980:CDS |
| CTTACTTGAAGAGCTTGGGA+TGG | 0.637522 | 3_1:-79872825 | None:intergenic |
| GGGAATTGTGGTGATAAATG+TGG | 0.639547 | 3_1:+79873473 | Msa0378980:CDS |
| AGTCCAGACAGCACTGTGGT+TGG | 0.642832 | 3_1:-79874812 | None:intergenic |
| ACCACCTATTAATCAATCAG+TGG | 0.645738 | 3_1:-79872685 | None:intergenic |
| TGTAAGTTGAAGGTTGAGGA+AGG | 0.646841 | 3_1:+79873269 | Msa0378980:CDS |
| GTTACTGGCATTGTGAACAA+TGG | 0.649639 | 3_1:+79875009 | Msa0378980:CDS |
| GTCGAAATACTCTTTGAATG+CGG | 0.658329 | 3_1:-79873006 | None:intergenic |
| GCATTCAAAGAGTATTTCGA+CGG | 0.663679 | 3_1:+79873008 | Msa0378980:CDS |
| TAACATTTAACAGTGTACAA+CGG | 0.664924 | 3_1:-79878254 | None:intergenic |
| AGAAGGAACATGAAGAGGAG+CGG | 0.666643 | 3_1:+79873246 | Msa0378980:CDS |
| CCTTCCATGCTAAAATGCGG+AGG | 0.671452 | 3_1:-79872761 | None:intergenic |
| GATACGAAGATTGCTGATGG+TGG | 0.676742 | 3_1:+79873356 | Msa0378980:CDS |
| TCAGCAATCTTCGTATCCCG+CGG | 0.680115 | 3_1:-79873350 | None:intergenic |
| AAGAGGATAATGCTTCAGCA+AGG | 0.686587 | 3_1:+79875765 | Msa0378980:CDS |
| GAGGTACGAAAATCACTCGT+CGG | 0.686796 | 3_1:+79873128 | Msa0378980:CDS |
| CCTCAGTCCAGACAGCACTG+TGG | 0.692166 | 3_1:-79874816 | None:intergenic |
| TGGGGAGAAAAGGTCCATGG+AGG | 0.741307 | 3_1:+79874756 | Msa0378980:CDS |
| TAGAAGGTTAACATTCACCG+AGG | 0.759653 | 3_1:+79873109 | Msa0378980:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAAAAATCAG+TGG | - | chr3_1:79872656-79872675 | None:intergenic | 10.0% |
| !!! | ACTGATTTTTTTTTTTTTTT+TGG | + | chr3_1:79872655-79872674 | Msa0378980:intron | 10.0% |
| !! | TTATATGTTAATATATGTTA+TGG | + | chr3_1:79873539-79873558 | Msa0378980:intron | 10.0% |
| !! | ATAATTATTGTTTAAATAGA+AGG | + | chr3_1:79873587-79873606 | Msa0378980:intron | 10.0% |
| !!! | AATCAAAGTAATTTTTTAAT+TGG | + | chr3_1:79873640-79873659 | Msa0378980:intron | 10.0% |
| !!! | ATCAAAGTAATTTTTTAATT+GGG | + | chr3_1:79873641-79873660 | Msa0378980:intron | 10.0% |
| !!! | ACATTTATTTTACTCAAATT+TGG | + | chr3_1:79873966-79873985 | Msa0378980:intron | 15.0% |
| !! | AAATTATGAACATAACATAA+AGG | - | chr3_1:79875232-79875251 | None:intergenic | 15.0% |
| !!! | TGTTCATAATTTTTCATATT+TGG | + | chr3_1:79875240-79875259 | Msa0378980:intron | 15.0% |
| !! | CTTATTCTCAAATATTAAAA+GGG | - | chr3_1:79875560-79875579 | None:intergenic | 15.0% |
| !!! | CTTTTAATATTTGAGAATAA+GGG | + | chr3_1:79875559-79875578 | Msa0378980:intron | 15.0% |
| !!! | TTTTAATATTTGAGAATAAG+GGG | + | chr3_1:79875560-79875579 | Msa0378980:intron | 15.0% |
| !!! | ATAAGGATTTTATAAATTGA+AGG | - | chr3_1:79875869-79875888 | None:intergenic | 15.0% |
| !!! | AAGGTTTTATTATTTTAACT+TGG | - | chr3_1:79876875-79876894 | None:intergenic | 15.0% |
| !! | AAGTTAAAATAATAAAACCT+TGG | + | chr3_1:79876874-79876893 | Msa0378980:intron | 15.0% |
| !! | TTAAAAAAATCTTTGGTAAA+GGG | - | chr3_1:79877006-79877025 | None:intergenic | 15.0% |
| !! | GATTGTAATGTGTTAATTAA+CGG | - | chr3_1:79872926-79872945 | None:intergenic | 20.0% |
| !! | TTAACACATTACAATCTAAA+CGG | + | chr3_1:79872930-79872949 | Msa0378980:intron | 20.0% |
| !!! | CTATATTCTTTGTAGATTTT+GGG | - | chr3_1:79873053-79873072 | None:intergenic | 20.0% |
| !!! | TCTATATTCTTTGTAGATTT+TGG | - | chr3_1:79873054-79873073 | None:intergenic | 20.0% |
| !! | ATTGTTTAAATAGAAGGATT+TGG | + | chr3_1:79873593-79873612 | Msa0378980:intron | 20.0% |
| !! | TACGATATCGATAAAAAAAT+TGG | + | chr3_1:79873706-79873725 | Msa0378980:intron | 20.0% |
| !! | TGTTTGGTTAAACAATTTAT+AGG | + | chr3_1:79873917-79873936 | Msa0378980:intron | 20.0% |
| !! | GTTTGGTTAAACAATTTATA+GGG | + | chr3_1:79873918-79873937 | Msa0378980:intron | 20.0% |
| !! | TTAAACAATTTATAGGGAAT+GGG | + | chr3_1:79873924-79873943 | Msa0378980:intron | 20.0% |
| !! | TACATAAAATGTAACAAGAA+AGG | + | chr3_1:79874066-79874085 | Msa0378980:intron | 20.0% |
| !!! | AAAGTAGAGATGATTTTAAT+GGG | - | chr3_1:79874134-79874153 | None:intergenic | 20.0% |
| !! | ATTGTTCGTTAAAGTTAATT+AGG | + | chr3_1:79874233-79874252 | Msa0378980:intron | 20.0% |
| !! | TTGTTCGTTAAAGTTAATTA+GGG | + | chr3_1:79874234-79874253 | Msa0378980:intron | 20.0% |
| !! | AAAATAAATTTGCATTTGCT+TGG | + | chr3_1:79874387-79874406 | Msa0378980:intron | 20.0% |
| !! | TATATTTGAATCTATCAAGA+AGG | + | chr3_1:79875303-79875322 | Msa0378980:intron | 20.0% |
| !! | CCTTATTCTCAAATATTAAA+AGG | - | chr3_1:79875561-79875580 | None:intergenic | 20.0% |
| !!! | CCTTTTAATATTTGAGAATA+AGG | + | chr3_1:79875558-79875577 | Msa0378980:intron | 20.0% |
| !! | CAAAGATAATAACAAGTATA+AGG | - | chr3_1:79875886-79875905 | None:intergenic | 20.0% |
| !!! | AAGAATATTGTTAAGTTTTG+CGG | - | chr3_1:79876011-79876030 | None:intergenic | 20.0% |
| !!! | CTACTATGTTTTTTTACAAT+GGG | - | chr3_1:79876160-79876179 | None:intergenic | 20.0% |
| !!! | TCTACTATGTTTTTTTACAA+TGG | - | chr3_1:79876161-79876180 | None:intergenic | 20.0% |
| !! | GAATTTATGAAGAAAAACAT+GGG | - | chr3_1:79876442-79876461 | None:intergenic | 20.0% |
| !! | AGAATTTATGAAGAAAAACA+TGG | - | chr3_1:79876443-79876462 | None:intergenic | 20.0% |
| !! | GAAGAGTAATATTAAGAATT+TGG | - | chr3_1:79876566-79876585 | None:intergenic | 20.0% |
| !!! | AAGGTATTAAAAACAGAAAA+AGG | - | chr3_1:79876976-79876995 | None:intergenic | 20.0% |
| !! | GTTAAAAAAATCTTTGGTAA+AGG | - | chr3_1:79877007-79877026 | None:intergenic | 20.0% |
| !! | TATTCATGAAATATACAGAT+GGG | - | chr3_1:79877037-79877056 | None:intergenic | 20.0% |
| !! | TTATTCATGAAATATACAGA+TGG | - | chr3_1:79877038-79877057 | None:intergenic | 20.0% |
| !!! | TTTTTTGCAAGTAATATGAT+AGG | + | chr3_1:79877102-79877121 | Msa0378980:intron | 20.0% |
| !! | TTTAAATACATCAAAGTTGT+TGG | - | chr3_1:79877431-79877450 | None:intergenic | 20.0% |
| !! | CTTTGATGTATTTAAATTTC+TGG | + | chr3_1:79877435-79877454 | Msa0378980:intron | 20.0% |
| !! | TCAATATCTTTGATGAAAAT+TGG | + | chr3_1:79877462-79877481 | Msa0378980:intron | 20.0% |
| !! | AAAAGAAAAGTAAGAAAGAA+AGG | + | chr3_1:79877486-79877505 | Msa0378980:intron | 20.0% |
| ! | AAAAAAAATCAGTGGAATGA+TGG | - | chr3_1:79872648-79872667 | None:intergenic | 25.0% |
| !!! | AAGTAATTTTTTAATTGGGC+CGG | + | chr3_1:79873645-79873664 | Msa0378980:intron | 25.0% |
| ! | ATCGATAAAAAAATTGGAGA+AGG | + | chr3_1:79873712-79873731 | Msa0378980:intron | 25.0% |
| !!! | TGTTTTGAATCTATGTTGTT+TGG | + | chr3_1:79873901-79873920 | Msa0378980:intron | 25.0% |
| ! | GTTAAACAATTTATAGGGAA+TGG | + | chr3_1:79873923-79873942 | Msa0378980:intron | 25.0% |
| !!! | AAGTAGAGATGATTTTAATG+GGG | - | chr3_1:79874133-79874152 | None:intergenic | 25.0% |
| !! | GAAAGTAGAGATGATTTTAA+TGG | - | chr3_1:79874135-79874154 | None:intergenic | 25.0% |
| !!! | ATGTTAAGTTGTTTTTTCTC+TGG | + | chr3_1:79874442-79874461 | Msa0378980:intron | 25.0% |
| !!! | TGTTAAGTTGTTTTTTCTCT+GGG | + | chr3_1:79874443-79874462 | Msa0378980:intron | 25.0% |
| ! | AAATCGAAAAACTAATGACA+TGG | - | chr3_1:79874640-79874659 | None:intergenic | 25.0% |
| !!! | AAAGTGTTGTTATTCTATCA+TGG | + | chr3_1:79874686-79874705 | Msa0378980:intron | 25.0% |
| !!! | ATTTAATTTGAAATCCTCCA+TGG | - | chr3_1:79874773-79874792 | None:intergenic | 25.0% |
| !! | AATACATTCAAGTTTAGTCT+TGG | - | chr3_1:79874917-79874936 | None:intergenic | 25.0% |
| ! | CACTATTACTGTTATCATTT+CGG | - | chr3_1:79874990-79875009 | None:intergenic | 25.0% |
| ! | TGAATGAAAATCCTTCAAAA+AGG | + | chr3_1:79875133-79875152 | Msa0378980:CDS | 25.0% |
| ! | AGATAAAATCCACATGAAAA+AGG | - | chr3_1:79875275-79875294 | None:intergenic | 25.0% |
| ! | TAAAAGAAGTAAACAACAAC+TGG | - | chr3_1:79875804-79875823 | None:intergenic | 25.0% |
| !!! | TACTTGTTATTATCTTTGTC+AGG | + | chr3_1:79875888-79875907 | Msa0378980:intron | 25.0% |
| !!! | ACTTGTTATTATCTTTGTCA+GGG | + | chr3_1:79875889-79875908 | Msa0378980:intron | 25.0% |
| ! | AATAAAAATACCTGATTGAG+TGG | - | chr3_1:79875951-79875970 | None:intergenic | 25.0% |
| !! | AGAATATTGTTAAGTTTTGC+GGG | - | chr3_1:79876010-79876029 | None:intergenic | 25.0% |
| ! | ATTTAATAACTCGCATTTGA+GGG | - | chr3_1:79876062-79876081 | None:intergenic | 25.0% |
| ! | TATTTAATAACTCGCATTTG+AGG | - | chr3_1:79876063-79876082 | None:intergenic | 25.0% |
| !! | AATTCAAAGCTTGTTTGATT+TGG | - | chr3_1:79876308-79876327 | None:intergenic | 25.0% |
| !!! | CAAACAAGCTTTGAATTAAA+TGG | + | chr3_1:79876311-79876330 | Msa0378980:intron | 25.0% |
| ! | AAATGGTCTATCAATAAACA+TGG | + | chr3_1:79876328-79876347 | Msa0378980:intron | 25.0% |
| ! | CAATAAACATGGTTTATGAT+AGG | + | chr3_1:79876339-79876358 | Msa0378980:intron | 25.0% |
| ! | TCAATACTTAGAAGATTCAT+CGG | + | chr3_1:79876586-79876605 | Msa0378980:intron | 25.0% |
| ! | TAAAATGAGGTTTAAGTAAG+TGG | + | chr3_1:79876613-79876632 | Msa0378980:intron | 25.0% |
| ! | ATTTGAATAATACCGCTATA+AGG | - | chr3_1:79876726-79876745 | None:intergenic | 25.0% |
| ! | AATAGGAACAAAGAATTCAA+AGG | + | chr3_1:79876929-79876948 | Msa0378980:intron | 25.0% |
| ! | GTCTAGGTTAAAAAAATCTT+TGG | - | chr3_1:79877013-79877032 | None:intergenic | 25.0% |
| ! | TCATGAATAAATTCATGACA+AGG | + | chr3_1:79877048-79877067 | Msa0378980:intron | 25.0% |
| ! | GTTGACAAATTATAACATGA+AGG | + | chr3_1:79877074-79877093 | Msa0378980:intron | 25.0% |
| ! | AACAGAGCAAGAAAATAAAT+AGG | + | chr3_1:79877374-79877393 | Msa0378980:intron | 25.0% |
| ! | ACAGAGCAAGAAAATAAATA+GGG | + | chr3_1:79877375-79877394 | Msa0378980:intron | 25.0% |
| !!! | TTGTTGCTGATTTGTTAATT+AGG | + | chr3_1:79877952-79877971 | Msa0378980:intron | 25.0% |
| !!! | GGTTAAACATTTTGATGAAT+TGG | + | chr3_1:79877994-79878013 | Msa0378980:CDS | 25.0% |
| ! | AAGATTCTATCTTAACTGAA+CGG | + | chr3_1:79878059-79878078 | Msa0378980:CDS | 25.0% |
| ! | TGAGTGTATTTGTATAGTTA+TGG | + | chr3_1:79878163-79878182 | Msa0378980:three_prime_UTR | 25.0% |
| ! | TGATATCATTCTGATAAGTA+CGG | + | chr3_1:79878215-79878234 | Msa0378980:three_prime_UTR | 25.0% |
| ! | TAACATTTAACAGTGTACAA+CGG | - | chr3_1:79878257-79878276 | None:intergenic | 25.0% |
| !! | GCGTTTAGAAAGTTTTTATT+CGG | + | chr3_1:79878279-79878298 | Msa0378980:three_prime_UTR | 25.0% |
| !! | GCGTTTAGAAAGTTTTTATT+CGG | + | chr3_1:79878279-79878298 | Msa0378980:three_prime_UTR | 25.0% |
| ! | AGTTCCACTGATTGATTAAT+AGG | + | chr3_1:79872681-79872700 | Msa0378980:intron | 30.0% |
| TGTGTTAATTAACGGAGTTA+GGG | - | chr3_1:79872918-79872937 | None:intergenic | 30.0% | |
| ATGTGTTAATTAACGGAGTT+AGG | - | chr3_1:79872919-79872938 | None:intergenic | 30.0% | |
| ! | GAACAAGGTTTTTCTTTTCT+TGG | + | chr3_1:79873166-79873185 | Msa0378980:CDS | 30.0% |
| ! | AAAAATCAACCTTGCTACTT+CGG | - | chr3_1:79873511-79873530 | None:intergenic | 30.0% |
| !!! | AGTAATTTTTTAATTGGGCC+GGG | + | chr3_1:79873646-79873665 | Msa0378980:intron | 30.0% |
| GTCATTTGATCTATATAACC+CGG | - | chr3_1:79873667-79873686 | None:intergenic | 30.0% | |
| TTAAGTTCACATGATGTGAA+AGG | - | chr3_1:79873841-79873860 | None:intergenic | 30.0% | |
| TGTGAACTTAACATAGTGTT+TGG | + | chr3_1:79873850-79873869 | Msa0378980:intron | 30.0% | |
| AACTTAACATAGTGTTTGGT+TGG | + | chr3_1:79873854-79873873 | Msa0378980:intron | 30.0% | |
| ACTTAACATAGTGTTTGGTT+GGG | + | chr3_1:79873855-79873874 | Msa0378980:intron | 30.0% | |
| !! | AGTAGAGATGATTTTAATGG+GGG | - | chr3_1:79874132-79874151 | None:intergenic | 30.0% |
| ! | AGTGTTTGGTTCAAATGAAA+GGG | - | chr3_1:79874210-79874229 | None:intergenic | 30.0% |
| TAACGAACAATAACAGTGTT+TGG | - | chr3_1:79874224-79874243 | None:intergenic | 30.0% | |
| TTAATTAGGGTGTGATTTCA+AGG | + | chr3_1:79874247-79874266 | Msa0378980:intron | 30.0% | |
| GGTTGAATAAGTGAAAAATG+AGG | + | chr3_1:79874353-79874372 | Msa0378980:intron | 30.0% | |
| ! | AAAATAGTACTGGGTGAAAA+TGG | - | chr3_1:79874484-79874503 | None:intergenic | 30.0% |
| ATTGCAAGCAAAATAGTACT+GGG | - | chr3_1:79874493-79874512 | None:intergenic | 30.0% | |
| AATTTGCATTGCATGAAGAA+GGG | - | chr3_1:79874608-79874627 | None:intergenic | 30.0% | |
| AAATTTGCATTGCATGAAGA+AGG | - | chr3_1:79874609-79874628 | None:intergenic | 30.0% | |
| ! | TGTTGTTATTCTATCATGGT+AGG | + | chr3_1:79874690-79874709 | Msa0378980:intron | 30.0% |
| TGCACGAAATGTTTCAAAAA+CGG | + | chr3_1:79874727-79874746 | Msa0378980:CDS | 30.0% | |
| TGTTTCAAAAACGGGAATTA+TGG | + | chr3_1:79874736-79874755 | Msa0378980:CDS | 30.0% | |
| GTTTCAAAAACGGGAATTAT+GGG | + | chr3_1:79874737-79874756 | Msa0378980:CDS | 30.0% | |
| TTTCAAAAACGGGAATTATG+GGG | + | chr3_1:79874738-79874757 | Msa0378980:CDS | 30.0% | |
| !!! | TTAGAATCTGTTTTGAAGCA+TGG | + | chr3_1:79874856-79874875 | Msa0378980:CDS | 30.0% |
| !!! | TAGAATCTGTTTTGAAGCAT+GGG | + | chr3_1:79874857-79874876 | Msa0378980:CDS | 30.0% |
| GATAACAGTAATAGTGTTAC+TGG | + | chr3_1:79874994-79875013 | Msa0378980:CDS | 30.0% | |
| !! | TTCTGCTCAACTTCATTTTT+AGG | - | chr3_1:79875102-79875121 | None:intergenic | 30.0% |
| AAAAATGAAGTTGAGCAGAA+TGG | + | chr3_1:79875102-79875121 | Msa0378980:CDS | 30.0% | |
| ATGAAAATCCTTCAAAAAGG+CGG | + | chr3_1:79875136-79875155 | Msa0378980:CDS | 30.0% | |
| ATCTATCAAGAAGGATTTAG+TGG | + | chr3_1:79875312-79875331 | Msa0378980:intron | 30.0% | |
| ! | AAATGAGTTGGATAAAGACA+TGG | + | chr3_1:79875336-79875355 | Msa0378980:intron | 30.0% |
| ! | TGGTTTTTGATAGAACACTA+TGG | + | chr3_1:79875356-79875375 | Msa0378980:intron | 30.0% |
| TAGAATTTGTGAAAGACTAG+TGG | + | chr3_1:79875405-79875424 | Msa0378980:intron | 30.0% | |
| !! | AGTTCATGATGTTTTGAATC+AGG | + | chr3_1:79875631-79875650 | Msa0378980:intron | 30.0% |
| CAACATCAAATATATCCCTT+GGG | - | chr3_1:79875745-79875764 | None:intergenic | 30.0% | |
| TCAACATCAAATATATCCCT+TGG | - | chr3_1:79875746-79875765 | None:intergenic | 30.0% | |
| GGATATATTTGATGTTGAAG+AGG | + | chr3_1:79875748-79875767 | Msa0378980:CDS | 30.0% | |
| ! | GACTCATGAACAAAAAGTTT+TGG | + | chr3_1:79876034-79876053 | Msa0378980:intron | 30.0% |
| TAATAATGATGCATGCTATC+CGG | + | chr3_1:79876092-79876111 | Msa0378980:intron | 30.0% | |
| GCGATACTAAGGAAAATTAT+TGG | + | chr3_1:79876282-79876301 | Msa0378980:intron | 30.0% | |
| TGGTTTATGATAGGACATTA+TGG | + | chr3_1:79876348-79876367 | Msa0378980:intron | 30.0% | |
| TAAGAATTTGGATCCAACTA+TGG | - | chr3_1:79876554-79876573 | None:intergenic | 30.0% | |
| ! | AATTTTCCACTTCATCCTTA+AGG | - | chr3_1:79876826-79876845 | None:intergenic | 30.0% |
| GAATAAATTCATGACAAGGA+AGG | + | chr3_1:79877052-79877071 | Msa0378980:intron | 30.0% | |
| AGTTACAACAACGAAGAATA+TGG | - | chr3_1:79877313-79877332 | None:intergenic | 30.0% | |
| TACAGGCTATTAAACATTGT+GGG | - | chr3_1:79877355-79877374 | None:intergenic | 30.0% | |
| TTACAGGCTATTAAACATTG+TGG | - | chr3_1:79877356-79877375 | None:intergenic | 30.0% | |
| ! | TTATTTTCTTGCTCTGTTAC+AGG | - | chr3_1:79877372-79877391 | None:intergenic | 30.0% |
| CAGAGCAAGAAAATAAATAG+GGG | + | chr3_1:79877376-79877395 | Msa0378980:intron | 30.0% | |
| GCAGAATAAGATAAGATTAG+AGG | - | chr3_1:79877678-79877697 | None:intergenic | 30.0% | |
| ! | TCTGTAGTTTTTGACATTGT+TGG | + | chr3_1:79877870-79877889 | Msa0378980:intron | 30.0% |
| TTGTGGAAGACATTTAAATC+TGG | + | chr3_1:79878091-79878110 | Msa0378980:CDS | 30.0% | |
| !!! | TGTCTCTAAGATTTTAGAGA+AGG | - | chr3_1:79878139-79878158 | None:intergenic | 30.0% |
| !! | TCTCTAAAATCTTAGAGACA+AGG | + | chr3_1:79878139-79878158 | Msa0378980:exon | 30.0% |
| ! | TTTGTATAGTTATGGTTCTG+TGG | + | chr3_1:79878171-79878190 | Msa0378980:three_prime_UTR | 30.0% |
| ! | TCCACTGATTGATTAATAGG+TGG | + | chr3_1:79872684-79872703 | Msa0378980:five_prime_UTR | 35.0% |
| ACCACCTATTAATCAATCAG+TGG | - | chr3_1:79872688-79872707 | None:intergenic | 35.0% | |
| !! | CGAGTTCTGAATCTGAAATT+GGG | - | chr3_1:79872796-79872815 | None:intergenic | 35.0% |
| !! | TCGAGTTCTGAATCTGAAAT+TGG | - | chr3_1:79872797-79872816 | None:intergenic | 35.0% |
| GTCGAAATACTCTTTGAATG+CGG | - | chr3_1:79873009-79873028 | None:intergenic | 35.0% | |
| !! | GCATTCAAAGAGTATTTCGA+CGG | + | chr3_1:79873008-79873027 | Msa0378980:CDS | 35.0% |
| GTGAATGTTAACCTTCTAGA+AGG | - | chr3_1:79873107-79873126 | None:intergenic | 35.0% | |
| ! | TTTTTCTTTTCTTGGAGCGT+TGG | + | chr3_1:79873174-79873193 | Msa0378980:CDS | 35.0% |
| !! | TTTTCTTTTCTTGGAGCGTT+GGG | + | chr3_1:79873175-79873194 | Msa0378980:CDS | 35.0% |
| GAAATAGGCTTCAACGAATT+TGG | - | chr3_1:79873326-79873345 | None:intergenic | 35.0% | |
| ! | TGATTTGATTCGACGTAAAG+AGG | + | chr3_1:79873442-79873461 | Msa0378980:CDS | 35.0% |
| GGAGAAGGTAATTGTTCATT+TGG | + | chr3_1:79873727-79873746 | Msa0378980:intron | 35.0% | |
| ! | TTTAGGTTTGGTAGGGTTTA+TGG | + | chr3_1:79873765-79873784 | Msa0378980:intron | 35.0% |
| TTTGGTAGGGTTTATGGTAA+TGG | + | chr3_1:79873771-79873790 | Msa0378980:intron | 35.0% | |
| ! | CAGTGTTTGGTTCAAATGAA+AGG | - | chr3_1:79874211-79874230 | None:intergenic | 35.0% |
| TATTCAACCTACACCATGTT+TGG | - | chr3_1:79874342-79874361 | None:intergenic | 35.0% | |
| GATTGCAAGCAAAATAGTAC+TGG | - | chr3_1:79874494-79874513 | None:intergenic | 35.0% | |
| AACGCTAGTTGGATGAAAAA+AGG | - | chr3_1:79874545-79874564 | None:intergenic | 35.0% | |
| AGAAAAAAAGAGGAAAGCAG+AGG | - | chr3_1:79874578-79874597 | None:intergenic | 35.0% | |
| GGGGGATAAAAGAAAAAAAG+AGG | - | chr3_1:79874588-79874607 | None:intergenic | 35.0% | |
| ATTTGCATTGCATGAAGAAG+GGG | - | chr3_1:79874607-79874626 | None:intergenic | 35.0% | |
| GCACGAAATGTTTCAAAAAC+GGG | + | chr3_1:79874728-79874747 | Msa0378980:CDS | 35.0% | |
| !!! | AGAATCTGTTTTGAAGCATG+GGG | + | chr3_1:79874858-79874877 | Msa0378980:CDS | 35.0% |
| GAACAATGGAAACAAAGTTC+AGG | + | chr3_1:79875023-79875042 | Msa0378980:CDS | 35.0% | |
| ! | CATTGAAGTTTCTTGGTGAT+CGG | - | chr3_1:79875058-79875077 | None:intergenic | 35.0% |
| !! | TTGCATTCTCCTTTTTCATG+TGG | + | chr3_1:79875263-79875282 | Msa0378980:intron | 35.0% |
| GGATTTAGTGGTAAATGAGT+TGG | + | chr3_1:79875324-79875343 | Msa0378980:intron | 35.0% | |
| TATTTACATGTTCCTTTCCC+TGG | - | chr3_1:79875477-79875496 | None:intergenic | 35.0% | |
| AGTGCGGATATTAATACATG+AGG | - | chr3_1:79875515-79875534 | None:intergenic | 35.0% | |
| CATGTATTAATATCCGCACT+TGG | + | chr3_1:79875515-79875534 | Msa0378980:intron | 35.0% | |
| AGAATACAATCAACCAAGTG+CGG | - | chr3_1:79875531-79875550 | None:intergenic | 35.0% | |
| !! | TCATGATGTTTTGAATCAGG+TGG | + | chr3_1:79875634-79875653 | Msa0378980:intron | 35.0% |
| !! | CATGATGTTTTGAATCAGGT+GGG | + | chr3_1:79875635-79875654 | Msa0378980:intron | 35.0% |
| AAATCTCAGGAGAGAAAGTA+GGG | + | chr3_1:79876128-79876147 | Msa0378980:intron | 35.0% | |
| ! | GAGAATCTTCGTAGAAGTAT+TGG | + | chr3_1:79876211-79876230 | Msa0378980:intron | 35.0% |
| !! | TTCGTAGAAGTATTGGTAAG+TGG | + | chr3_1:79876218-79876237 | Msa0378980:intron | 35.0% |
| !! | TAGAAGTATTGGTAAGTGGA+TGG | + | chr3_1:79876222-79876241 | Msa0378980:intron | 35.0% |
| GAGGATAGTTCAAGTATTAG+AGG | + | chr3_1:79876255-79876274 | Msa0378980:intron | 35.0% | |
| TGGTTTCGGATAGAACATTA+TGG | - | chr3_1:79876534-79876553 | None:intergenic | 35.0% | |
| TTTGGATCCAACTATGGTTT+CGG | - | chr3_1:79876548-79876567 | None:intergenic | 35.0% | |
| ATTCATCGGTCACTAAAATG+AGG | + | chr3_1:79876600-79876619 | Msa0378980:intron | 35.0% | |
| TCGTCTAGGAAACAATCTTA+TGG | + | chr3_1:79876639-79876658 | Msa0378980:intron | 35.0% | |
| TGCCATGTTAGTAGAGAATT+TGG | + | chr3_1:79876693-79876712 | Msa0378980:intron | 35.0% | |
| GCCATGTTAGTAGAGAATTT+GGG | + | chr3_1:79876694-79876713 | Msa0378980:intron | 35.0% | |
| ACCCAAATTCTCTACTAACA+TGG | - | chr3_1:79876698-79876717 | None:intergenic | 35.0% | |
| !! | TTTGGGTTAGTACCTTATAG+CGG | + | chr3_1:79876711-79876730 | Msa0378980:intron | 35.0% |
| ! | ATTATCAGCAACCTGTTTTG+AGG | + | chr3_1:79876777-79876796 | Msa0378980:intron | 35.0% |
| AATGAACCTTAAGGATGAAG+TGG | + | chr3_1:79876817-79876836 | Msa0378980:intron | 35.0% | |
| AGGATGAAGTGGAAAATTAC+TGG | + | chr3_1:79876828-79876847 | Msa0378980:intron | 35.0% | |
| GGATGAAGTGGAAAATTACT+GGG | + | chr3_1:79876829-79876848 | Msa0378980:intron | 35.0% | |
| AAAACCTTGGAGACACAAAA+AGG | + | chr3_1:79876887-79876906 | Msa0378980:intron | 35.0% | |
| AAACCTTGGAGACACAAAAA+GGG | + | chr3_1:79876888-79876907 | Msa0378980:intron | 35.0% | |
| TTTGGTAAAGGGAAACAGAA+AGG | - | chr3_1:79876995-79877014 | None:intergenic | 35.0% | |
| AAATATACAGATGGGTGTCT+AGG | - | chr3_1:79877029-79877048 | None:intergenic | 35.0% | |
| TGATAGGCATTAGATGAAAG+AGG | + | chr3_1:79877118-79877137 | Msa0378980:intron | 35.0% | |
| GATAGGCATTAGATGAAAGA+GGG | + | chr3_1:79877119-79877138 | Msa0378980:intron | 35.0% | |
| ! | TTAGCATTTTGTATGCCCAA+AGG | - | chr3_1:79877221-79877240 | None:intergenic | 35.0% |
| GTTCAATCTCTCTATCTTCT+TGG | - | chr3_1:79877797-79877816 | None:intergenic | 35.0% | |
| AGCAACTATAATTGATGCTC+AGG | + | chr3_1:79877824-79877843 | Msa0378980:CDS | 35.0% | |
| TGACATTGTTGGAATTTCTC+TGG | + | chr3_1:79877881-79877900 | Msa0378980:intron | 35.0% | |
| TGGTTCAGGTATACATCTTA+GGG | + | chr3_1:79877901-79877920 | Msa0378980:intron | 35.0% | |
| ! | TGATGAATTGGAGCTTTTGA+TGG | + | chr3_1:79878006-79878025 | Msa0378980:CDS | 35.0% |
| AGTGCTTACTTGAAGAGCTT+GGG | - | chr3_1:79872832-79872851 | None:intergenic | 40.0% | |
| TAGAAGGTTAACATTCACCG+AGG | + | chr3_1:79873109-79873128 | Msa0378980:CDS | 40.0% | |
| ! | TGACGTCACTTTCTTGAACA+AGG | + | chr3_1:79873151-79873170 | Msa0378980:CDS | 40.0% |
| !!! | TTTCTTTTCTTGGAGCGTTG+GGG | + | chr3_1:79873176-79873195 | Msa0378980:CDS | 40.0% |
| CGTTGGGGTTTGATTAACTA+CGG | + | chr3_1:79873191-79873210 | Msa0378980:CDS | 40.0% | |
| ! | TGTAAGTTGAAGGTTGAGGA+AGG | + | chr3_1:79873269-79873288 | Msa0378980:CDS | 40.0% |
| GCGTCGTATTCAGATGTTTA+CGG | + | chr3_1:79873419-79873438 | Msa0378980:CDS | 40.0% | |
| GACGTAAAGAGGTCAATTGT+GGG | + | chr3_1:79873453-79873472 | Msa0378980:CDS | 40.0% | |
| GGGAATTGTGGTGATAAATG+TGG | + | chr3_1:79873473-79873492 | Msa0378980:CDS | 40.0% | |
| TGTGGTGATAAATGTGGTTC+TGG | + | chr3_1:79873479-79873498 | Msa0378980:CDS | 40.0% | |
| TGTTCATTTGGACTTAGCTC+TGG | + | chr3_1:79873739-79873758 | Msa0378980:intron | 40.0% | |
| !! | TAGCTCTGGTGATTTAGGTT+TGG | + | chr3_1:79873753-79873772 | Msa0378980:intron | 40.0% |
| ! | TCTGGTGATTTAGGTTTGGT+AGG | + | chr3_1:79873757-79873776 | Msa0378980:intron | 40.0% |
| ! | CTGGTGATTTAGGTTTGGTA+GGG | + | chr3_1:79873758-79873777 | Msa0378980:intron | 40.0% |
| !! | GGGTTTATGGTAATGGAATG+AGG | + | chr3_1:79873778-79873797 | Msa0378980:intron | 40.0% |
| !! | ATGGTAATGGAATGAGGTTC+TGG | + | chr3_1:79873784-79873803 | Msa0378980:intron | 40.0% |
| !! | TGGTAATGGAATGAGGTTCT+GGG | + | chr3_1:79873785-79873804 | Msa0378980:intron | 40.0% |
| TGTTTGGTTGGGAAAAATCG+AGG | + | chr3_1:79873866-79873885 | Msa0378980:intron | 40.0% | |
| GTTTGGTTGGGAAAAATCGA+GGG | + | chr3_1:79873867-79873886 | Msa0378980:intron | 40.0% | |
| ATTTGGCTGCTATCCCATAT+TGG | + | chr3_1:79873983-79874002 | Msa0378980:intron | 40.0% | |
| TTTGGCTGCTATCCCATATT+GGG | + | chr3_1:79873984-79874003 | Msa0378980:intron | 40.0% | |
| TCTCTACTTTCGAACCAAAC+AGG | + | chr3_1:79874144-79874163 | Msa0378980:intron | 40.0% | |
| CTCTACTTTCGAACCAAACA+GGG | + | chr3_1:79874145-79874164 | Msa0378980:intron | 40.0% | |
| AACCTACACCATGTTTGGTT+GGG | - | chr3_1:79874337-79874356 | None:intergenic | 40.0% | |
| GCATGAGAAAAAACGCTAGT+TGG | - | chr3_1:79874556-79874575 | None:intergenic | 40.0% | |
| TTTGCATTGCATGAAGAAGG+GGG | - | chr3_1:79874606-79874625 | None:intergenic | 40.0% | |
| GTTACTGGCATTGTGAACAA+TGG | + | chr3_1:79875009-79875028 | Msa0378980:CDS | 40.0% | |
| ! | CCTGTGTCATTGAAGTTTCT+TGG | - | chr3_1:79875065-79875084 | None:intergenic | 40.0% |
| CCAAGAAACTTCAATGACAC+AGG | + | chr3_1:79875062-79875081 | Msa0378980:CDS | 40.0% | |
| AAAATCCTTCAAAAAGGCGG+CGG | + | chr3_1:79875139-79875158 | Msa0378980:CDS | 40.0% | |
| ATCGCATCTCTAGCATATAC+TGG | + | chr3_1:79875451-79875470 | Msa0378980:intron | 40.0% | |
| !! | TTGAGAATAAGGGGTGTTTG+CGG | + | chr3_1:79875569-79875588 | Msa0378980:intron | 40.0% |
| ACTCATGATCACACTAAGCA+AGG | - | chr3_1:79875614-79875633 | None:intergenic | 40.0% | |
| AAGAGGATAATGCTTCAGCA+AGG | + | chr3_1:79875765-79875784 | Msa0378980:CDS | 40.0% | |
| AGATTTCACTCACACAAGAC+CGG | - | chr3_1:79876114-79876133 | None:intergenic | 40.0% | |
| TCTTGTGTGAGTGAAATCTC+AGG | + | chr3_1:79876115-79876134 | Msa0378980:intron | 40.0% | |
| GAAATCTCAGGAGAGAAAGT+AGG | + | chr3_1:79876127-79876146 | Msa0378980:intron | 40.0% | |
| ACCTATACCAAAACCACATG+AGG | - | chr3_1:79876190-79876209 | None:intergenic | 40.0% | |
| !!! | TCATGTGGTTTTGGTATAGG+TGG | + | chr3_1:79876189-79876208 | Msa0378980:intron | 40.0% |
| TTAGAGGTGAAGCGATACTA+AGG | + | chr3_1:79876271-79876290 | Msa0378980:intron | 40.0% | |
| GTTCTATCCGAAACCATAGT+TGG | + | chr3_1:79876538-79876557 | Msa0378980:intron | 40.0% | |
| TAAGTAAGTGGACATCGTCT+AGG | + | chr3_1:79876625-79876644 | Msa0378980:intron | 40.0% | |
| AATGCAACCAAAGAAGCTGT+TGG | + | chr3_1:79876743-79876762 | Msa0378980:intron | 40.0% | |
| !!! | AGCAACCTGTTTTGAGGTAA+GGG | + | chr3_1:79876783-79876802 | Msa0378980:intron | 40.0% |
| GTTCCTGCAAATGAACCTTA+AGG | + | chr3_1:79876808-79876827 | Msa0378980:intron | 40.0% | |
| CATCCTTAAGGTTCATTTGC+AGG | - | chr3_1:79876814-79876833 | None:intergenic | 40.0% | |
| AGTGGAAAATTACTGGGAAG+TGG | + | chr3_1:79876835-79876854 | Msa0378980:intron | 40.0% | |
| !! | GGATGGTGGAGAATGAAAAT+AGG | + | chr3_1:79876912-79876931 | Msa0378980:intron | 40.0% |
| ! | ATTTTGTATGCCCAAAGGTG+TGG | - | chr3_1:79877216-79877235 | None:intergenic | 40.0% |
| CAGTATGTGTAGAGTGGTAT+AGG | - | chr3_1:79877287-79877306 | None:intergenic | 40.0% | |
| CTATACCACTCTACACATAC+TGG | + | chr3_1:79877285-79877304 | Msa0378980:intron | 40.0% | |
| AACATTGTGGGAGACAAGAT+GGG | - | chr3_1:79877343-79877362 | None:intergenic | 40.0% | |
| AAACATTGTGGGAGACAAGA+TGG | - | chr3_1:79877344-79877363 | None:intergenic | 40.0% | |
| GCTCTTATACGTAGTGTCAA+TGG | - | chr3_1:79877720-79877739 | None:intergenic | 40.0% | |
| TATAAGAGCTGCCATTGGAA+CGG | + | chr3_1:79877731-79877750 | Msa0378980:CDS | 40.0% | |
| ! | TGTTGGAATTTCTCTGGTTC+AGG | + | chr3_1:79877887-79877906 | Msa0378980:intron | 40.0% |
| CTGGTTCAGGTATACATCTT+AGG | + | chr3_1:79877900-79877919 | Msa0378980:intron | 40.0% | |
| ! | ATTGGAGCTTTTGATGGAGA+AGG | + | chr3_1:79878012-79878031 | Msa0378980:CDS | 40.0% |
| !! | TTAAATCTGGTGTCGCTAGA+TGG | + | chr3_1:79878104-79878123 | Msa0378980:CDS | 40.0% |
| GAGCCTTCCATGCTAAAATG+CGG | - | chr3_1:79872767-79872786 | None:intergenic | 45.0% | |
| CTTACTTGAAGAGCTTGGGA+TGG | - | chr3_1:79872828-79872847 | None:intergenic | 45.0% | |
| GAGTGCTTACTTGAAGAGCT+TGG | - | chr3_1:79872833-79872852 | None:intergenic | 45.0% | |
| !!! | ACGGTGTCGTTTTTGCAGAA+TGG | + | chr3_1:79872949-79872968 | Msa0378980:intron | 45.0% |
| ! | TTTTTGCAGAATGGTTCGCG+TGG | + | chr3_1:79872958-79872977 | Msa0378980:intron | 45.0% |
| ! | TTTTGCAGAATGGTTCGCGT+GGG | + | chr3_1:79872959-79872978 | Msa0378980:intron | 45.0% |
| ! | ACCTTCTAGAAGGTTCTTCG+CGG | - | chr3_1:79873097-79873116 | None:intergenic | 45.0% |
| ! | GACGAGTGATTTTCGTACCT+CGG | - | chr3_1:79873129-79873148 | None:intergenic | 45.0% |
| GAGGTACGAAAATCACTCGT+CGG | + | chr3_1:79873128-79873147 | Msa0378980:CDS | 45.0% | |
| AGAAGGAACATGAAGAGGAG+CGG | + | chr3_1:79873246-79873265 | Msa0378980:CDS | 45.0% | |
| !! | TTGAGGAAGGTGCTCCTAAT+GGG | + | chr3_1:79873282-79873301 | Msa0378980:CDS | 45.0% |
| GCAACAACACGAATCCCATT+AGG | - | chr3_1:79873299-79873318 | None:intergenic | 45.0% | |
| GATACGAAGATTGCTGATGG+TGG | + | chr3_1:79873356-79873375 | Msa0378980:CDS | 45.0% | |
| ACATCTGAATACGACGCCAA+CGG | - | chr3_1:79873416-79873435 | None:intergenic | 45.0% | |
| CGACGTAAAGAGGTCAATTG+TGG | + | chr3_1:79873452-79873471 | Msa0378980:CDS | 45.0% | |
| GAGGTCAATTGTGGGAATTG+TGG | + | chr3_1:79873461-79873480 | Msa0378980:CDS | 45.0% | |
| TGGACATTACCGAAGTAGCA+AGG | + | chr3_1:79873499-79873518 | Msa0378980:CDS | 45.0% | |
| !! | GGACTTAGCTCTGGTGATTT+AGG | + | chr3_1:79873748-79873767 | Msa0378980:intron | 45.0% |
| TGGGTTCAACTTGTGGTGAT+GGG | + | chr3_1:79873804-79873823 | Msa0378980:intron | 45.0% | |
| TATAGGGAATGGGAGTGAAG+TGG | + | chr3_1:79873934-79873953 | Msa0378980:intron | 45.0% | |
| TTGGCTGCTATCCCATATTG+GGG | + | chr3_1:79873985-79874004 | Msa0378980:intron | 45.0% | |
| ATCCCATATTGGGGGTGATT+TGG | + | chr3_1:79873994-79874013 | Msa0378980:intron | 45.0% | |
| TCCCATATTGGGGGTGATTT+GGG | + | chr3_1:79873995-79874014 | Msa0378980:intron | 45.0% | |
| TCCCAAATCACCCCCAATAT+GGG | - | chr3_1:79873999-79874018 | None:intergenic | 45.0% | |
| ATCCCAAATCACCCCCAATA+TGG | - | chr3_1:79874000-79874019 | None:intergenic | 45.0% | |
| TTTCGAACCAAACAGGGAGA+GGG | + | chr3_1:79874151-79874170 | Msa0378980:intron | 45.0% | |
| ! | ATGAAAGGGTGCAAGGAGAA+GGG | - | chr3_1:79874196-79874215 | None:intergenic | 45.0% |
| ! | AATGAAAGGGTGCAAGGAGA+AGG | - | chr3_1:79874197-79874216 | None:intergenic | 45.0% |
| ! | GGTTCAAATGAAAGGGTGCA+AGG | - | chr3_1:79874203-79874222 | None:intergenic | 45.0% |
| TCCATCTTCCCAACCAAACA+TGG | + | chr3_1:79874326-79874345 | Msa0378980:intron | 45.0% | |
| ACCATGTTTGGTTGGGAAGA+TGG | - | chr3_1:79874330-79874349 | None:intergenic | 45.0% | |
| TTCCCAACCAAACATGGTGT+AGG | + | chr3_1:79874332-79874351 | Msa0378980:intron | 45.0% | |
| CAACCTACACCATGTTTGGT+TGG | - | chr3_1:79874338-79874357 | None:intergenic | 45.0% | |
| ACGGGAATTATGGGGAGAAA+AGG | + | chr3_1:79874746-79874765 | Msa0378980:CDS | 45.0% | |
| TTATGGGGAGAAAAGGTCCA+TGG | + | chr3_1:79874753-79874772 | Msa0378980:CDS | 45.0% | |
| !!! | TTTTGAAGCATGGGGATGAC+TGG | + | chr3_1:79874866-79874885 | Msa0378980:CDS | 45.0% |
| ! | TTTGAAGCATGGGGATGACT+GGG | + | chr3_1:79874867-79874886 | Msa0378980:CDS | 45.0% |
| AAACTCATTGAGCTGCCCTT+TGG | + | chr3_1:79874940-79874959 | Msa0378980:CDS | 45.0% | |
| AACTCATTGAGCTGCCCTTT+GGG | + | chr3_1:79874941-79874960 | Msa0378980:CDS | 45.0% | |
| AAATCCTTCAAAAAGGCGGC+GGG | + | chr3_1:79875140-79875159 | Msa0378980:CDS | 45.0% | |
| CTGCTTCATTAGTGAACTGC+TGG | - | chr3_1:79875184-79875203 | None:intergenic | 45.0% | |
| CAGCAGTTCACTAATGAAGC+AGG | + | chr3_1:79875182-79875201 | Msa0378980:CDS | 45.0% | |
| ATCTCTAGCATATACTGGCC+AGG | + | chr3_1:79875456-79875475 | Msa0378980:intron | 45.0% | |
| TCTCTAGCATATACTGGCCA+GGG | + | chr3_1:79875457-79875476 | Msa0378980:intron | 45.0% | |
| CATGATCACACTAAGCAAGG+TGG | - | chr3_1:79875611-79875630 | None:intergenic | 45.0% | |
| TGATGAGAATTCGCTCCCAA+GGG | + | chr3_1:79875727-79875746 | Msa0378980:CDS | 45.0% | |
| !! | TGAAGGTTTAGAGTTGGTGG+AGG | + | chr3_1:79875922-79875941 | Msa0378980:CDS | 45.0% |
| !! | GAAGGTTTAGAGTTGGTGGA+GGG | + | chr3_1:79875923-79875942 | Msa0378980:CDS | 45.0% |
| !! | AAGGTTTAGAGTTGGTGGAG+GGG | + | chr3_1:79875924-79875943 | Msa0378980:CDS | 45.0% |
| ATACCAAAACCACATGAGGC+AGG | - | chr3_1:79876186-79876205 | None:intergenic | 45.0% | |
| !!! | GCCTCATGTGGTTTTGGTAT+AGG | + | chr3_1:79876186-79876205 | Msa0378980:intron | 45.0% |
| ATAACGTCCCCTACTTCACT+TGG | + | chr3_1:79876381-79876400 | Msa0378980:intron | 45.0% | |
| TTTCCCCACCAAGTGAAGTA+GGG | - | chr3_1:79876392-79876411 | None:intergenic | 45.0% | |
| ! | CAAGCCTTATCCCACTAAGT+GGG | + | chr3_1:79876484-79876503 | Msa0378980:intron | 45.0% |
| ! | AAGCCTTATCCCACTAAGTG+GGG | + | chr3_1:79876485-79876504 | Msa0378980:intron | 45.0% |
| TGCACATCCAACAGCTTCTT+TGG | - | chr3_1:79876753-79876772 | None:intergenic | 45.0% | |
| AAGAAGCTGTTGGATGTGCA+TGG | + | chr3_1:79876753-79876772 | Msa0378980:intron | 45.0% | |
| !!! | CAGCAACCTGTTTTGAGGTA+AGG | + | chr3_1:79876782-79876801 | Msa0378980:intron | 45.0% |
| !!! | GCAACCTGTTTTGAGGTAAG+GGG | + | chr3_1:79876784-79876803 | Msa0378980:intron | 45.0% |
| !!! | CAACCTGTTTTGAGGTAAGG+GGG | + | chr3_1:79876785-79876804 | Msa0378980:intron | 45.0% |
| !!! | AACCTGTTTTGAGGTAAGGG+GGG | + | chr3_1:79876786-79876805 | Msa0378980:intron | 45.0% |
| TGGATCCAGTATGTGTAGAG+TGG | - | chr3_1:79877293-79877312 | None:intergenic | 45.0% | |
| ACATTGTGGGAGACAAGATG+GGG | - | chr3_1:79877342-79877361 | None:intergenic | 45.0% | |
| CTACGTATAAGAGCTGCCAT+TGG | + | chr3_1:79877726-79877745 | Msa0378980:CDS | 45.0% | |
| GGTTGAGAAGTTGCAACAGA+AGG | + | chr3_1:79877973-79877992 | Msa0378980:intron | 45.0% | |
| !! | CTGAACGGATTGATGTGTTG+TGG | + | chr3_1:79878074-79878093 | Msa0378980:CDS | 45.0% |
| !!! | AAAATTTTAAAAAAAATTGT+TGG | - | chr3_1:79874301-79874320 | None:intergenic | 5.0% |
| !! | AAAAATAAATGATAATAAAT+TGG | - | chr3_1:79877932-79877951 | None:intergenic | 5.0% |
| CATGCTAAAATGCGGAGGAG+GGG | - | chr3_1:79872759-79872778 | None:intergenic | 50.0% | |
| CCATGCTAAAATGCGGAGGA+GGG | - | chr3_1:79872760-79872779 | None:intergenic | 50.0% | |
| TCCATGCTAAAATGCGGAGG+AGG | - | chr3_1:79872761-79872780 | None:intergenic | 50.0% | |
| CCTTCCATGCTAAAATGCGG+AGG | - | chr3_1:79872764-79872783 | None:intergenic | 50.0% | |
| !! | CCTCCGCATTTTAGCATGGA+AGG | + | chr3_1:79872761-79872780 | Msa0378980:exon | 50.0% |
| ACCGCGAAGAACCTTCTAGA+AGG | + | chr3_1:79873093-79873112 | Msa0378980:CDS | 50.0% | |
| AGCGGAGAAGGAACATGAAG+AGG | + | chr3_1:79873241-79873260 | Msa0378980:CDS | 50.0% | |
| ! | AGAGGAGCGGTGTAAGTTGA+AGG | + | chr3_1:79873259-79873278 | Msa0378980:CDS | 50.0% |
| ! | GCGGTGTAAGTTGAAGGTTG+AGG | + | chr3_1:79873265-79873284 | Msa0378980:CDS | 50.0% |
| !! | GTTGAGGAAGGTGCTCCTAA+TGG | + | chr3_1:79873281-79873300 | Msa0378980:CDS | 50.0% |
| TGAAGCCTATTTCGTTGCCG+CGG | + | chr3_1:79873333-79873352 | Msa0378980:CDS | 50.0% | |
| TCAGCAATCTTCGTATCCCG+CGG | - | chr3_1:79873353-79873372 | None:intergenic | 50.0% | |
| CGGGATACGAAGATTGCTGA+TGG | + | chr3_1:79873353-79873372 | Msa0378980:CDS | 50.0% | |
| !! | ACGAAGATTGCTGATGGTGG+TGG | + | chr3_1:79873359-79873378 | Msa0378980:CDS | 50.0% |
| ! | TGGTGTTAAGATTGCGCCGT+TGG | + | chr3_1:79873397-79873416 | Msa0378980:CDS | 50.0% |
| !! | GAGGTTCTGGGTTCAACTTG+TGG | + | chr3_1:79873797-79873816 | Msa0378980:intron | 50.0% |
| CTGGGTTCAACTTGTGGTGA+TGG | + | chr3_1:79873803-79873822 | Msa0378980:intron | 50.0% | |
| TGGTTGGGAAAAATCGAGGG+AGG | + | chr3_1:79873870-79873889 | Msa0378980:intron | 50.0% | |
| TTGGGAAAAATCGAGGGAGG+AGG | + | chr3_1:79873873-79873892 | Msa0378980:intron | 50.0% | |
| TGGGAAAAATCGAGGGAGGA+GGG | + | chr3_1:79873874-79873893 | Msa0378980:intron | 50.0% | |
| TGGCTGCTATCCCATATTGG+GGG | + | chr3_1:79873986-79874005 | Msa0378980:intron | 50.0% | |
| CTTTCGAACCAAACAGGGAG+AGG | + | chr3_1:79874150-79874169 | Msa0378980:intron | 50.0% | |
| GTGATAACCCTCTCCCTGTT+TGG | - | chr3_1:79874161-79874180 | None:intergenic | 50.0% | |
| ACTCATTGAGCTGCCCTTTG+GGG | + | chr3_1:79874942-79874961 | Msa0378980:CDS | 50.0% | |
| CCTAACATGAGCTCCCCAAA+GGG | - | chr3_1:79874958-79874977 | None:intergenic | 50.0% | |
| AGCATATACTGGCCAGGGAA+AGG | + | chr3_1:79875462-79875481 | Msa0378980:intron | 50.0% | |
| !! | AAGGGGTGTTTGCGGAAGAT+CGG | + | chr3_1:79875577-79875596 | Msa0378980:intron | 50.0% |
| CTGCAGCAGCTGTGATATGA+GGG | - | chr3_1:79875682-79875701 | None:intergenic | 50.0% | |
| GTGATGAGAATTCGCTCCCA+AGG | + | chr3_1:79875726-79875745 | Msa0378980:CDS | 50.0% | |
| TATCTTTGTCAGGGCTCTCG+AGG | + | chr3_1:79875898-79875917 | Msa0378980:intron | 50.0% | |
| ! | CGAGGCTGAAGGTTTAGAGT+TGG | + | chr3_1:79875916-79875935 | Msa0378980:CDS | 50.0% |
| ! | GGCTGAAGGTTTAGAGTTGG+TGG | + | chr3_1:79875919-79875938 | Msa0378980:CDS | 50.0% |
| TAGTAGAGTCCTGCCTCATG+TGG | + | chr3_1:79876174-79876193 | Msa0378980:intron | 50.0% | |
| ! | AGTCCTGCCTCATGTGGTTT+TGG | + | chr3_1:79876180-79876199 | Msa0378980:intron | 50.0% |
| AGTGGATGGCAGACTAGATG+AGG | + | chr3_1:79876236-79876255 | Msa0378980:intron | 50.0% | |
| TTCCCCACCAAGTGAAGTAG+GGG | - | chr3_1:79876391-79876410 | None:intergenic | 50.0% | |
| CTTTCCCCACCAAGTGAAGT+AGG | - | chr3_1:79876393-79876412 | None:intergenic | 50.0% | |
| ! | CTACTTCACTTGGTGGGGAA+AGG | + | chr3_1:79876391-79876410 | Msa0378980:intron | 50.0% |
| CCACTTAGTGGGATAAGGCT+TGG | - | chr3_1:79876486-79876505 | None:intergenic | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | + | chr3_1:79876483-79876502 | Msa0378980:intron | 50.0% |
| TGACCCCACTTAGTGGGATA+AGG | - | chr3_1:79876491-79876510 | None:intergenic | 50.0% | |
| TGTAGCTGACCCCACTTAGT+GGG | - | chr3_1:79876497-79876516 | None:intergenic | 50.0% | |
| ATGTAGCTGACCCCACTTAG+TGG | - | chr3_1:79876498-79876517 | None:intergenic | 50.0% | |
| ACTAAGTGGGGTCAGCTACA+TGG | + | chr3_1:79876497-79876516 | Msa0378980:intron | 50.0% | |
| AACCCCCCTTACCTCAAAAC+AGG | - | chr3_1:79876791-79876810 | None:intergenic | 50.0% | |
| ACTGGGAAGTGGCAATAGAG+AGG | + | chr3_1:79876846-79876865 | Msa0378980:intron | 50.0% | |
| CTGGGAAGTGGCAATAGAGA+GGG | + | chr3_1:79876847-79876866 | Msa0378980:intron | 50.0% | |
| TGGGAAGTGGCAATAGAGAG+GGG | + | chr3_1:79876848-79876867 | Msa0378980:intron | 50.0% | |
| ! | CCACCCTTTTTGTGTCTCCA+AGG | - | chr3_1:79876894-79876913 | None:intergenic | 50.0% |
| CCTTGGAGACACAAAAAGGG+TGG | + | chr3_1:79876891-79876910 | Msa0378980:intron | 50.0% | |
| GGAGACACAAAAAGGGTGGA+TGG | + | chr3_1:79876895-79876914 | Msa0378980:intron | 50.0% | |
| GACACAAAAAGGGTGGATGG+TGG | + | chr3_1:79876898-79876917 | Msa0378980:intron | 50.0% | |
| AGCAATCTTGCTCCTAGCCA+AGG | + | chr3_1:79877189-79877208 | Msa0378980:intron | 50.0% | |
| TAGCCAAGGTCCACACCTTT+GGG | + | chr3_1:79877203-79877222 | Msa0378980:intron | 50.0% | |
| ! | TATAGGTCAGCGTCGGACTT+GGG | - | chr3_1:79877270-79877289 | None:intergenic | 50.0% |
| AGAGTGGTATAGGTCAGCGT+CGG | - | chr3_1:79877277-79877296 | None:intergenic | 50.0% | |
| CATTGTGGGAGACAAGATGG+GGG | - | chr3_1:79877341-79877360 | None:intergenic | 50.0% | |
| TGCTGCACGAGCAAAGTTGT+TGG | + | chr3_1:79877767-79877786 | Msa0378980:CDS | 50.0% | |
| TGCACGAGCAAAGTTGTTGG+CGG | + | chr3_1:79877770-79877789 | Msa0378980:CDS | 50.0% | |
| GGAGAAGGAACACGCTGAAA+TGG | + | chr3_1:79878027-79878046 | Msa0378980:CDS | 50.0% | |
| !! | CCCTCCTCCGCATTTTAGCA+TGG | + | chr3_1:79872757-79872776 | Msa0378980:exon | 55.0% |
| GAAGCCTATTTCGTTGCCGC+GGG | + | chr3_1:79873334-79873353 | Msa0378980:CDS | 55.0% | |
| GTATCCCGCGGCAACGAAAT+AGG | - | chr3_1:79873341-79873360 | None:intergenic | 55.0% | |
| !! | ATTGCTGATGGTGGTGGTGC+TGG | + | chr3_1:79873365-79873384 | Msa0378980:CDS | 55.0% |
| !! | TTGCTGATGGTGGTGGTGCT+GGG | + | chr3_1:79873366-79873385 | Msa0378980:CDS | 55.0% |
| GGGAAAAATCGAGGGAGGAG+GGG | + | chr3_1:79873875-79873894 | Msa0378980:intron | 55.0% | |
| GGAAAAATCGAGGGAGGAGG+GGG | + | chr3_1:79873876-79873895 | Msa0378980:intron | 55.0% | |
| AGGGAATGGGAGTGAAGTGG+AGG | + | chr3_1:79873937-79873956 | Msa0378980:intron | 55.0% | |
| AAGGAGAAGGGAGGAGAGGA+GGG | - | chr3_1:79874184-79874203 | None:intergenic | 55.0% | |
| ! | AAAGGGTGCAAGGAGAAGGG+AGG | - | chr3_1:79874193-79874212 | None:intergenic | 55.0% |
| TGGGGAGAAAAGGTCCATGG+AGG | + | chr3_1:79874756-79874775 | Msa0378980:CDS | 55.0% | |
| AGTCCAGACAGCACTGTGGT+TGG | - | chr3_1:79874815-79874834 | None:intergenic | 55.0% | |
| CACAGTGCTGTCTGGACTGA+GGG | + | chr3_1:79874817-79874836 | Msa0378980:CDS | 55.0% | |
| ! | CCCTTTGGGGAGCTCATGTT+AGG | + | chr3_1:79874955-79874974 | Msa0378980:CDS | 55.0% |
| GCCTAACATGAGCTCCCCAA+AGG | - | chr3_1:79874959-79874978 | None:intergenic | 55.0% | |
| GCTGCAGCAGCTGTGATATG+AGG | - | chr3_1:79875683-79875702 | None:intergenic | 55.0% | |
| ACGTCCCCTACTTCACTTGG+TGG | + | chr3_1:79876384-79876403 | Msa0378980:intron | 55.0% | |
| CGTCCCCTACTTCACTTGGT+GGG | + | chr3_1:79876385-79876404 | Msa0378980:intron | 55.0% | |
| ! | GTCCCCTACTTCACTTGGTG+GGG | + | chr3_1:79876386-79876405 | Msa0378980:intron | 55.0% |
| ! | CAAAGGTGTGGACCTTGGCT+AGG | - | chr3_1:79877204-79877223 | None:intergenic | 55.0% |
| CTAGCCAAGGTCCACACCTT+TGG | + | chr3_1:79877202-79877221 | Msa0378980:intron | 55.0% | |
| ! | ATGCCCAAAGGTGTGGACCT+TGG | - | chr3_1:79877209-79877228 | None:intergenic | 55.0% |
| ! | GTATAGGTCAGCGTCGGACT+TGG | - | chr3_1:79877271-79877290 | None:intergenic | 55.0% |
| CTGCCATTGGAACGGCTCTT+GGG | + | chr3_1:79877739-79877758 | Msa0378980:CDS | 55.0% | |
| TGCCATTGGAACGGCTCTTG+GGG | + | chr3_1:79877740-79877759 | Msa0378980:CDS | 55.0% | |
| !! | GATGGTGGTGGTGCTGGGAA+CGG | + | chr3_1:79873371-79873390 | Msa0378980:CDS | 60.0% |
| !! | ATGGTGGTGGTGCTGGGAAC+GGG | + | chr3_1:79873372-79873391 | Msa0378980:CDS | 60.0% |
| AGGAGAAGGGAGGAGAGGAG+GGG | - | chr3_1:79874183-79874202 | None:intergenic | 60.0% | |
| CAAGGAGAAGGGAGGAGAGG+AGG | - | chr3_1:79874185-79874204 | None:intergenic | 60.0% | |
| GTGCAAGGAGAAGGGAGGAG+AGG | - | chr3_1:79874188-79874207 | None:intergenic | 60.0% | |
| GTGCCAACCACAGTGCTGTC+TGG | + | chr3_1:79874809-79874828 | Msa0378980:CDS | 60.0% | |
| CCTCAGTCCAGACAGCACTG+TGG | - | chr3_1:79874819-79874838 | None:intergenic | 60.0% | |
| CCACAGTGCTGTCTGGACTG+AGG | + | chr3_1:79874816-79874835 | Msa0378980:CDS | 60.0% | |
| ! | GCAACCCGCCGCCTTTTTGA+AGG | - | chr3_1:79875147-79875166 | None:intergenic | 60.0% |
| GGTGGGACTGCTCTCAACTG+TGG | + | chr3_1:79875652-79875671 | Msa0378980:intron | 60.0% | |
| GTGGAGGGGTCCACTCAATC+AGG | + | chr3_1:79875938-79875957 | Msa0378980:CDS | 60.0% | |
| GCTGCCATTGGAACGGCTCT+TGG | + | chr3_1:79877738-79877757 | Msa0378980:CDS | 60.0% | |
| AGCCCCAAGAGCCGTTCCAA+TGG | - | chr3_1:79877745-79877764 | None:intergenic | 60.0% | |
| AACTACGGCGCGCCTTCTGC+TGG | + | chr3_1:79873206-79873225 | Msa0378980:CDS | 65.0% | |
| !! | TGGTGGTGGTGCTGGGAACG+GGG | + | chr3_1:79873373-79873392 | Msa0378980:CDS | 65.0% |
| GTCAGGGCTCTCGAGGCTGA+AGG | + | chr3_1:79875905-79875924 | Msa0378980:intron | 65.0% | |
| CGCCTTCTGCTGGCGACGGT+GGG | + | chr3_1:79873216-79873235 | Msa0378980:CDS | 70.0% | |
| GCCTTCTGCTGGCGACGGTG+GGG | + | chr3_1:79873217-79873236 | Msa0378980:CDS | 70.0% | |
| TCCCCACCGTCGCCAGCAGA+AGG | - | chr3_1:79873221-79873240 | None:intergenic | 70.0% | |
| TGCTGGCGACGGTGGGGAAG+CGG | + | chr3_1:79873223-79873242 | Msa0378980:CDS | 70.0% | |
| CGACGGTGGGGAAGCGGAGA+AGG | + | chr3_1:79873229-79873248 | Msa0378980:CDS | 70.0% | |
| ! | GGTGGTGCTGGGAACGGGGT+TGG | + | chr3_1:79873377-79873396 | Msa0378980:CDS | 70.0% |
| GGCGCGCCTTCTGCTGGCGA+CGG | + | chr3_1:79873212-79873231 | Msa0378980:CDS | 75.0% | |
| GCGCCTTCTGCTGGCGACGG+TGG | + | chr3_1:79873215-79873234 | Msa0378980:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 79872626 | 79878360 | 79872626 | ID=Msa0378980;Name=Msa0378980 |
| chr3_1 | mRNA | 79872626 | 79878360 | 79872626 | ID=Msa0378980-mRNA-1;Parent=Msa0378980;Name=Msa0378980-mRNA-1;_AED=0.05;_eAED=0.05;_QI=118|1|1|1|0.85|0.75|8|207|540 |
| chr3_1 | exon | 79872626 | 79872650 | 79872626 | ID=Msa0378980-mRNA-1:exon:19757;Parent=Msa0378980-mRNA-1 |
| chr3_1 | exon | 79872683 | 79872842 | 79872683 | ID=Msa0378980-mRNA-1:exon:19758;Parent=Msa0378980-mRNA-1 |
| chr3_1 | exon | 79872967 | 79873520 | 79872967 | ID=Msa0378980-mRNA-1:exon:19759;Parent=Msa0378980-mRNA-1 |
| chr3_1 | exon | 79874712 | 79875203 | 79874712 | ID=Msa0378980-mRNA-1:exon:19760;Parent=Msa0378980-mRNA-1 |
| chr3_1 | exon | 79875653 | 79875786 | 79875653 | ID=Msa0378980-mRNA-1:exon:19761;Parent=Msa0378980-mRNA-1 |
| chr3_1 | exon | 79875910 | 79875959 | 79875910 | ID=Msa0378980-mRNA-1:exon:19762;Parent=Msa0378980-mRNA-1 |
| chr3_1 | exon | 79877700 | 79877845 | 79877700 | ID=Msa0378980-mRNA-1:exon:19763;Parent=Msa0378980-mRNA-1 |
| chr3_1 | exon | 79877974 | 79878360 | 79877974 | ID=Msa0378980-mRNA-1:exon:19764;Parent=Msa0378980-mRNA-1 |
| chr3_1 | five_prime_UTR | 79872626 | 79872650 | 79872626 | ID=Msa0378980-mRNA-1:five_prime_utr;Parent=Msa0378980-mRNA-1 |
| chr3_1 | five_prime_UTR | 79872683 | 79872775 | 79872683 | ID=Msa0378980-mRNA-1:five_prime_utr;Parent=Msa0378980-mRNA-1 |
| chr3_1 | CDS | 79872776 | 79872842 | 79872776 | ID=Msa0378980-mRNA-1:cds;Parent=Msa0378980-mRNA-1 |
| chr3_1 | CDS | 79872967 | 79873520 | 79872967 | ID=Msa0378980-mRNA-1:cds;Parent=Msa0378980-mRNA-1 |
| chr3_1 | CDS | 79874712 | 79875203 | 79874712 | ID=Msa0378980-mRNA-1:cds;Parent=Msa0378980-mRNA-1 |
| chr3_1 | CDS | 79875653 | 79875786 | 79875653 | ID=Msa0378980-mRNA-1:cds;Parent=Msa0378980-mRNA-1 |
| chr3_1 | CDS | 79875910 | 79875959 | 79875910 | ID=Msa0378980-mRNA-1:cds;Parent=Msa0378980-mRNA-1 |
| chr3_1 | CDS | 79877700 | 79877845 | 79877700 | ID=Msa0378980-mRNA-1:cds;Parent=Msa0378980-mRNA-1 |
| chr3_1 | CDS | 79877974 | 79878153 | 79877974 | ID=Msa0378980-mRNA-1:cds;Parent=Msa0378980-mRNA-1 |
| chr3_1 | three_prime_UTR | 79878154 | 79878360 | 79878154 | ID=Msa0378980-mRNA-1:three_prime_utr;Parent=Msa0378980-mRNA-1 |
| Gene Sequence |
| Protein sequence |
