Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1228290 | XP_013443746.1 | 94.336 | 565 | 31 | 1 | 16 | 580 | 1 | 564 | 0.0 | 1093 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1228290 | sp|Q9M219|MTEFH_ARATH | 46.507 | 544 | 284 | 3 | 36 | 578 | 17 | 554 | 1.51e-176 | 513 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1228290 | A0A072TKN3 | 94.336 | 565 | 31 | 1 | 16 | 580 | 1 | 564 | 0.0 | 1093 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1228290 | TR | mTERF |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0008410 | Msa1228290 | 0.819694 | 1.015167e-52 | -8.615850e-47 |
| Msa0027390 | Msa1228290 | 0.822602 | 2.169749e-53 | -8.615850e-47 |
| Msa0032370 | Msa1228290 | 0.825518 | 4.488337e-54 | -8.615850e-47 |
| Msa0032840 | Msa1228290 | -0.802562 | 5.288280e-49 | -8.615850e-47 |
| Msa0039250 | Msa1228290 | 0.804654 | 1.946983e-49 | -8.615850e-47 |
| Msa0044020 | Msa1228290 | 0.821800 | 3.329182e-53 | -8.615850e-47 |
| Msa0048000 | Msa1228290 | 0.800656 | 1.301082e-48 | -8.615850e-47 |
| Msa0057710 | Msa1228290 | 0.806179 | 9.329245e-50 | -8.615850e-47 |
| Msa0073670 | Msa1228290 | 0.804175 | 2.450594e-49 | -8.615850e-47 |
| Msa0110970 | Msa1228290 | 0.813703 | 2.238077e-51 | -8.615850e-47 |
| Msa0113160 | Msa1228290 | 0.814957 | 1.182544e-51 | -8.615850e-47 |
| Msa0114540 | Msa1228290 | -0.827539 | 1.479439e-54 | -8.615850e-47 |
| Msa0638070 | Msa1228290 | 0.802947 | 4.405523e-49 | -8.615850e-47 |
| Msa0641190 | Msa1228290 | 0.805084 | 1.583646e-49 | -8.615850e-47 |
| Msa0684500 | Msa1228290 | 0.801296 | 9.626355e-49 | -8.615850e-47 |
| Msa0702340 | Msa1228290 | 0.806824 | 6.818424e-50 | -8.615850e-47 |
| Msa0702350 | Msa1228290 | 0.802824 | 4.669542e-49 | -8.615850e-47 |
| Msa0702570 | Msa1228290 | 0.808120 | 3.621098e-50 | -8.615850e-47 |
| Msa0702590 | Msa1228290 | 0.806496 | 7.995959e-50 | -8.615850e-47 |
| Msa0702660 | Msa1228290 | 0.808432 | 3.106215e-50 | -8.615850e-47 |
| Msa0703230 | Msa1228290 | 0.812386 | 4.352300e-51 | -8.615850e-47 |
| Msa0724830 | Msa1228290 | 0.801472 | 8.858777e-49 | -8.615850e-47 |
| Msa0734960 | Msa1228290 | 0.812471 | 4.169075e-51 | -8.615850e-47 |
| Msa0737570 | Msa1228290 | 0.809371 | 1.955513e-50 | -8.615850e-47 |
| Msa0741900 | Msa1228290 | 0.803486 | 3.407486e-49 | -8.615850e-47 |
| Msa0743680 | Msa1228290 | 0.820480 | 6.710184e-53 | -8.615850e-47 |
| Msa0743800 | Msa1228290 | 0.825499 | 4.534334e-54 | -8.615850e-47 |
| Msa0754720 | Msa1228290 | -0.854169 | 1.472363e-61 | -8.615850e-47 |
| Msa0756630 | Msa1228290 | -0.828481 | 8.777621e-55 | -8.615850e-47 |
| Msa0760380 | Msa1228290 | 0.807504 | 4.894517e-50 | -8.615850e-47 |
| Msa0760880 | Msa1228290 | 0.805218 | 1.484030e-49 | -8.615850e-47 |
| Msa0762210 | Msa1228290 | 0.823763 | 1.162386e-53 | -8.615850e-47 |
| Msa0778320 | Msa1228290 | 0.800093 | 1.693778e-48 | -8.615850e-47 |
| Msa0788710 | Msa1228290 | 0.801592 | 8.372292e-49 | -8.615850e-47 |
| Msa0795660 | Msa1228290 | 0.813207 | 2.877260e-51 | -8.615850e-47 |
| Msa0810020 | Msa1228290 | 0.801664 | 8.093680e-49 | -8.615850e-47 |
| Msa0822990 | Msa1228290 | 0.809839 | 1.551517e-50 | -8.615850e-47 |
| Msa0824640 | Msa1228290 | 0.808952 | 2.404877e-50 | -8.615850e-47 |
| Msa0824660 | Msa1228290 | 0.802792 | 4.742665e-49 | -8.615850e-47 |
| Msa0829620 | Msa1228290 | 0.818104 | 2.333138e-52 | -8.615850e-47 |
| Msa0840260 | Msa1228290 | 0.810957 | 8.901430e-51 | -8.615850e-47 |
| Msa0840850 | Msa1228290 | -0.806602 | 7.595908e-50 | -8.615850e-47 |
| Msa0122810 | Msa1228290 | 0.802997 | 4.301250e-49 | -8.615850e-47 |
| Msa0124340 | Msa1228290 | 0.828819 | 7.271083e-55 | -8.615850e-47 |
| Msa0133720 | Msa1228290 | 0.802833 | 4.649930e-49 | -8.615850e-47 |
| Msa0135420 | Msa1228290 | 0.809259 | 2.067388e-50 | -8.615850e-47 |
| Msa0140960 | Msa1228290 | 0.842709 | 2.191695e-58 | -8.615850e-47 |
| Msa0142480 | Msa1228290 | 0.821285 | 4.379336e-53 | -8.615850e-47 |
| Msa0143380 | Msa1228290 | 0.819381 | 1.196709e-52 | -8.615850e-47 |
| Msa0146260 | Msa1228290 | 0.805645 | 1.207902e-49 | -8.615850e-47 |
| Msa0155330 | Msa1228290 | 0.814454 | 1.528133e-51 | -8.615850e-47 |
| Msa0165300 | Msa1228290 | 0.824693 | 7.028402e-54 | -8.615850e-47 |
| Msa0172350 | Msa1228290 | 0.801704 | 7.941055e-49 | -8.615850e-47 |
| Msa0185590 | Msa1228290 | 0.811915 | 5.512019e-51 | -8.615850e-47 |
| Msa0186890 | Msa1228290 | 0.807140 | 5.846117e-50 | -8.615850e-47 |
| Msa0191250 | Msa1228290 | 0.809643 | 1.710046e-50 | -8.615850e-47 |
| Msa0205850 | Msa1228290 | 0.807269 | 5.489981e-50 | -8.615850e-47 |
| Msa0222920 | Msa1228290 | 0.803263 | 3.789952e-49 | -8.615850e-47 |
| Msa0232320 | Msa1228290 | 0.819636 | 1.046835e-52 | -8.615850e-47 |
| Msa1224830 | Msa1228290 | 0.822466 | 2.333585e-53 | -8.615850e-47 |
| Msa1224840 | Msa1228290 | 0.810207 | 1.292839e-50 | -8.615850e-47 |
| Msa1228290 | Msa1228890 | 0.812503 | 4.102757e-51 | -8.615850e-47 |
| Msa1228290 | Msa1240310 | 0.819279 | 1.262564e-52 | -8.615850e-47 |
| Msa1228290 | Msa1280560 | 0.802731 | 4.882111e-49 | -8.615850e-47 |
| Msa1228290 | Msa1281620 | 0.801758 | 7.741837e-49 | -8.615850e-47 |
| Msa1228290 | Msa1303250 | 0.811062 | 8.448205e-51 | -8.615850e-47 |
| Msa1228290 | Msa1307950 | 0.804198 | 2.423379e-49 | -8.615850e-47 |
| Msa1228290 | Msa1320740 | 0.826586 | 2.501276e-54 | -8.615850e-47 |
| Msa1228290 | Msa1331910 | 0.815350 | 9.669143e-52 | -8.615850e-47 |
| Msa1228290 | Msa1362510 | 0.814205 | 1.734812e-51 | -8.615850e-47 |
| Msa1228290 | Msa1373330 | 0.824355 | 8.443439e-54 | -8.615850e-47 |
| Msa1228290 | Msa1374040 | 0.804846 | 1.775581e-49 | -8.615850e-47 |
| Msa1228290 | Msa1386230 | 0.803580 | 3.257450e-49 | -8.615850e-47 |
| Msa1228290 | Msa1390310 | 0.808992 | 2.358278e-50 | -8.615850e-47 |
| Msa1228290 | Msa1398860 | 0.820912 | 5.338259e-53 | -8.615850e-47 |
| Msa1228290 | Msa1402270 | 0.823466 | 1.364360e-53 | -8.615850e-47 |
| Msa1228290 | Msa1404540 | 0.805792 | 1.125160e-49 | -8.615850e-47 |
| Msa1228290 | Msa1408790 | 0.808526 | 2.965630e-50 | -8.615850e-47 |
| Msa1228290 | Msa1415940 | 0.826599 | 2.483093e-54 | -8.615850e-47 |
| Msa1228290 | Msa1427060 | 0.814684 | 1.358949e-51 | -8.615850e-47 |
| Msa1228290 | Msa1459180 | 0.822300 | 2.550368e-53 | -8.615850e-47 |
| Msa1228290 | Msa1466460 | 0.801653 | 8.135352e-49 | -8.615850e-47 |
| Msa1228290 | Msa1466990 | 0.802161 | 6.396346e-49 | -8.615850e-47 |
| Msa0369850 | Msa1228290 | 0.805744 | 1.151629e-49 | -8.615850e-47 |
| Msa0372660 | Msa1228290 | 0.811487 | 6.831645e-51 | -8.615850e-47 |
| Msa0393680 | Msa1228290 | 0.801517 | 8.672519e-49 | -8.615850e-47 |
| Msa0410500 | Msa1228290 | 0.815608 | 8.474126e-52 | -8.615850e-47 |
| Msa0413450 | Msa1228290 | 0.814370 | 1.594677e-51 | -8.615850e-47 |
| Msa0415810 | Msa1228290 | 0.814656 | 1.378588e-51 | -8.615850e-47 |
| Msa0423900 | Msa1228290 | 0.838274 | 3.169220e-57 | -8.615850e-47 |
| Msa0430820 | Msa1228290 | 0.802425 | 5.645959e-49 | -8.615850e-47 |
| Msa0452960 | Msa1228290 | 0.801473 | 8.855944e-49 | -8.615850e-47 |
| Msa0469910 | Msa1228290 | -0.809307 | 2.018202e-50 | -8.615850e-47 |
| Msa0980940 | Msa1228290 | 0.810970 | 8.844915e-51 | -8.615850e-47 |
| Msa0993530 | Msa1228290 | 0.827687 | 1.363197e-54 | -8.615850e-47 |
| Msa1004420 | Msa1228290 | 0.821875 | 3.198792e-53 | -8.615850e-47 |
| Msa1012810 | Msa1228290 | 0.804429 | 2.169137e-49 | -8.615850e-47 |
| Msa1013770 | Msa1228290 | 0.811707 | 6.118013e-51 | -8.615850e-47 |
| Msa1051600 | Msa1228290 | 0.818624 | 1.778910e-52 | -8.615850e-47 |
| Msa1056460 | Msa1228290 | 0.805789 | 1.126883e-49 | -8.615850e-47 |
| Msa1063950 | Msa1228290 | 0.816522 | 5.296103e-52 | -8.615850e-47 |
| Msa1078710 | Msa1228290 | 0.833851 | 4.205915e-56 | -8.615850e-47 |
| Msa1087980 | Msa1228290 | 0.811241 | 7.725705e-51 | -8.615850e-47 |
| Msa1102770 | Msa1228290 | 0.827350 | 1.642704e-54 | -8.615850e-47 |
| Msa0239450 | Msa1228290 | 0.805818 | 1.110798e-49 | -8.615850e-47 |
| Msa0245850 | Msa1228290 | 0.821837 | 3.264626e-53 | -8.615850e-47 |
| Msa0245940 | Msa1228290 | 0.802441 | 5.602076e-49 | -8.615850e-47 |
| Msa0259560 | Msa1228290 | 0.820518 | 6.573930e-53 | -8.615850e-47 |
| Msa0260810 | Msa1228290 | 0.803195 | 3.914205e-49 | -8.615850e-47 |
| Msa0267870 | Msa1228290 | 0.817086 | 3.957052e-52 | -8.615850e-47 |
| Msa0283520 | Msa1228290 | 0.807763 | 4.311463e-50 | -8.615850e-47 |
| Msa0287310 | Msa1228290 | 0.815789 | 7.722914e-52 | -8.615850e-47 |
| Msa0287650 | Msa1228290 | 0.813992 | 1.933067e-51 | -8.615850e-47 |
| Msa0292120 | Msa1228290 | 0.800459 | 1.426946e-48 | -8.615850e-47 |
| Msa0302980 | Msa1228290 | 0.813639 | 2.311264e-51 | -8.615850e-47 |
| Msa0310410 | Msa1228290 | 0.804470 | 2.126961e-49 | -8.615850e-47 |
| Msa0311700 | Msa1228290 | 0.808243 | 3.407431e-50 | -8.615850e-47 |
| Msa0311860 | Msa1228290 | 0.814954 | 1.184326e-51 | -8.615850e-47 |
| Msa0321170 | Msa1228290 | 0.804230 | 2.386628e-49 | -8.615850e-47 |
| Msa0325850 | Msa1228290 | 0.811965 | 5.375396e-51 | -8.615850e-47 |
| Msa0334040 | Msa1228290 | 0.815606 | 8.481464e-52 | -8.615850e-47 |
| Msa0335040 | Msa1228290 | 0.836196 | 1.078096e-56 | -8.615850e-47 |
| Msa1130210 | Msa1228290 | -0.809182 | 2.146916e-50 | -8.615850e-47 |
| Msa1133710 | Msa1228290 | 0.834316 | 3.216608e-56 | -8.615850e-47 |
| Msa1140690 | Msa1228290 | 0.836358 | 9.806497e-57 | -8.615850e-47 |
| Msa1170280 | Msa1228290 | 0.809291 | 2.034381e-50 | -8.615850e-47 |
| Msa1172670 | Msa1228290 | 0.802146 | 6.441713e-49 | -8.615850e-47 |
| Msa1174850 | Msa1228290 | 0.802070 | 6.678036e-49 | -8.615850e-47 |
| Msa1179940 | Msa1228290 | 0.806911 | 6.534761e-50 | -8.615850e-47 |
| Msa1179970 | Msa1228290 | 0.809492 | 1.842751e-50 | -8.615850e-47 |
| Msa1185540 | Msa1228290 | 0.807258 | 5.518923e-50 | -8.615850e-47 |
| Msa1214890 | Msa1228290 | 0.810249 | 1.266316e-50 | -8.615850e-47 |
| Msa1217660 | Msa1228290 | 0.808559 | 2.918692e-50 | -8.615850e-47 |
| Msa0484780 | Msa1228290 | 0.810855 | 9.363993e-51 | -8.615850e-47 |
| Msa0505770 | Msa1228290 | 0.807645 | 4.567217e-50 | -8.615850e-47 |
| Msa0506940 | Msa1228290 | 0.803069 | 4.156930e-49 | -8.615850e-47 |
| Msa0509610 | Msa1228290 | 0.809468 | 1.864777e-50 | -8.615850e-47 |
| Msa0515640 | Msa1228290 | 0.848744 | 5.040773e-60 | -8.615850e-47 |
| Msa0521880 | Msa1228290 | 0.806932 | 6.470244e-50 | -8.615850e-47 |
| Msa0526890 | Msa1228290 | 0.800742 | 1.249550e-48 | -8.615850e-47 |
| Msa0541860 | Msa1228290 | 0.803458 | 3.453648e-49 | -8.615850e-47 |
| Msa0560080 | Msa1228290 | 0.801687 | 8.005631e-49 | -8.615850e-47 |
| Msa0574890 | Msa1228290 | 0.801225 | 9.954307e-49 | -8.615850e-47 |
| Msa0585920 | Msa1228290 | 0.809200 | 2.127696e-50 | -8.615850e-47 |
| Msa0856920 | Msa1228290 | 0.815087 | 1.106613e-51 | -8.615850e-47 |
| Msa0863800 | Msa1228290 | 0.818887 | 1.550191e-52 | -8.615850e-47 |
| Msa0864010 | Msa1228290 | 0.807562 | 4.757061e-50 | -8.615850e-47 |
| Msa0867890 | Msa1228290 | 0.803489 | 3.401987e-49 | -8.615850e-47 |
| Msa0869100 | Msa1228290 | 0.845515 | 3.870064e-59 | -8.615850e-47 |
| Msa0882510 | Msa1228290 | 0.803772 | 2.971762e-49 | -8.615850e-47 |
| Msa0888940 | Msa1228290 | 0.801925 | 7.154043e-49 | -8.615850e-47 |
| Msa0908050 | Msa1228290 | 0.816861 | 4.446079e-52 | -8.615850e-47 |
| Msa0908170 | Msa1228290 | 0.819390 | 1.190817e-52 | -8.615850e-47 |
| Msa0930780 | Msa1228290 | 0.816173 | 6.339763e-52 | -8.615850e-47 |
| Msa0933230 | Msa1228290 | 0.805914 | 1.060614e-49 | -8.615850e-47 |
| Msa0933310 | Msa1228290 | 0.815143 | 1.075215e-51 | -8.615850e-47 |
| Msa0933440 | Msa1228290 | 0.803374 | 3.594111e-49 | -8.615850e-47 |
| Msa0959010 | Msa1228290 | 0.826729 | 2.312322e-54 | -8.615850e-47 |
| Msa0971090 | Msa1228290 | 0.806743 | 7.092390e-50 | -8.615850e-47 |
| Msa0976330 | Msa1228290 | 0.816131 | 6.477672e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1228290 | MtrunA17_Chr8g0335121 | 94.336 | 565 | 31 | 1 | 16 | 580 | 1 | 564 | 0.0 | 1093 |
| Msa1228290 | MtrunA17_Chr7g0249711 | 55.856 | 555 | 230 | 6 | 24 | 572 | 31 | 576 | 0.0 | 635 |
| Msa1228290 | MtrunA17_Chr5g0438661 | 25.568 | 528 | 372 | 9 | 45 | 568 | 97 | 607 | 1.61e-52 | 189 |
| Msa1228290 | MtrunA17_Chr7g0258521 | 42.667 | 150 | 75 | 3 | 38 | 180 | 29 | 174 | 1.32e-24 | 107 |
| Msa1228290 | MtrunA17_Chr7g0258521 | 25.926 | 162 | 117 | 3 | 410 | 570 | 302 | 461 | 7.07e-14 | 74.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1228290 | AT3G60400.1 | 46.507 | 544 | 284 | 3 | 36 | 578 | 17 | 554 | 1.54e-177 | 513 |
| Msa1228290 | AT4G19650.2 | 26.476 | 525 | 351 | 8 | 54 | 568 | 85 | 584 | 1.89e-51 | 186 |
| Msa1228290 | AT4G19650.1 | 25.447 | 503 | 340 | 8 | 76 | 568 | 90 | 567 | 5.39e-44 | 165 |
| Msa1228290 | AT5G06810.1 | 25.095 | 526 | 351 | 13 | 56 | 567 | 78 | 574 | 2.65e-39 | 152 |
| Msa1228290 | AT5G06811.1 | 24.014 | 583 | 393 | 12 | 15 | 567 | 8 | 570 | 1.24e-38 | 150 |
| Msa1228290 | AT5G45113.1 | 22.803 | 421 | 295 | 11 | 157 | 568 | 7 | 406 | 3.09e-21 | 97.1 |
Find 138 sgRNAs with CRISPR-Local
Find 225 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTGTGTGCTTTGTGAATT+TGG | 0.075830 | 8_2:-3764836 | Msa1228290:CDS |
| TCTCTAGAGTTTCAGGATTT+TGG | 0.108976 | 8_2:+3763856 | None:intergenic |
| TTTGATTGCCTTCTACATTT+AGG | 0.135769 | 8_2:-3763933 | Msa1228290:CDS |
| GCCAATTGGGGTTGGGTTAC+AGG | 0.186624 | 8_2:-3763178 | Msa1228290:three_prime_UTR |
| TGGAACAGAAATGTCGTTTA+AGG | 0.220611 | 8_2:+3765913 | None:intergenic |
| TCATATGTGACAATTATTAA+TGG | 0.235205 | 8_2:+3762910 | None:intergenic |
| GGGACACTCCTTAGAGCTTT+TGG | 0.239993 | 8_2:-3763805 | Msa1228290:CDS |
| TAATTTCCTATGTCAGGATA+TGG | 0.244795 | 8_2:-3763826 | Msa1228290:CDS |
| TCATGAAGCTCGAAATTTAT+TGG | 0.254864 | 8_2:+3763578 | None:intergenic |
| AAACATTTGATTCTTGAGTA+TGG | 0.263491 | 8_2:-3764458 | Msa1228290:CDS |
| TTGATTGCCTTCTACATTTA+GGG | 0.265986 | 8_2:-3763932 | Msa1228290:CDS |
| GAAAAGTGGTTCTGAGATAA+AGG | 0.272746 | 8_2:-3764759 | Msa1228290:CDS |
| TTAAATTTCATGCATACTAT+TGG | 0.285045 | 8_2:-3764029 | Msa1228290:CDS |
| CTTCTTATACATTGCCAATT+GGG | 0.298469 | 8_2:-3763191 | Msa1228290:three_prime_UTR |
| AATACAACCAATAGTTTATA+AGG | 0.301523 | 8_2:+3762825 | None:intergenic |
| AATTGCTCAAACCAATGTTT+TGG | 0.304518 | 8_2:+3763606 | None:intergenic |
| CTATCACATTGCAGTGCTAT+AGG | 0.305340 | 8_2:+3762958 | None:intergenic |
| CTTTGTTTGTTGAAAAGATA+TGG | 0.308280 | 8_2:-3764731 | Msa1228290:CDS |
| CATGAAGCTCGAAATTTATT+GGG | 0.313412 | 8_2:+3763579 | None:intergenic |
| AGCAAATGTGACAATTATTA+TGG | 0.317998 | 8_2:-3762705 | Msa1228290:three_prime_UTR |
| CTCTAATCTCATTTCAAAGT+TGG | 0.326018 | 8_2:-3765724 | Msa1228290:CDS |
| ACCTTTATCATGCTCTTCAT+TGG | 0.329479 | 8_2:+3764112 | None:intergenic |
| AGAGTTGTTGAGTCTCAATT+TGG | 0.360038 | 8_2:-3764348 | Msa1228290:CDS |
| TAGCCACTACTTGACAATAT+TGG | 0.364261 | 8_2:+3763066 | None:intergenic |
| TTCATGCATACTATTGGCTT+TGG | 0.365567 | 8_2:-3764023 | Msa1228290:CDS |
| CATGTGATTTAAGATATTCA+TGG | 0.366992 | 8_2:+3763986 | None:intergenic |
| CCCAATGAAGAGCATGATAA+AGG | 0.371844 | 8_2:-3764113 | Msa1228290:CDS |
| ATCTGAACCTCGGCTTAATT+CGG | 0.372746 | 8_2:+3763745 | None:intergenic |
| TCTAATCTCATTTCAAAGTT+GGG | 0.374378 | 8_2:-3765723 | Msa1228290:CDS |
| GCTTCTTATACATTGCCAAT+TGG | 0.374632 | 8_2:-3763192 | Msa1228290:three_prime_UTR |
| CCCTGTAACCCAACCCCAAT+TGG | 0.381911 | 8_2:+3763177 | None:intergenic |
| ATAGGTTGCTTTCTGATTTG+AGG | 0.392968 | 8_2:-3764619 | Msa1228290:CDS |
| GAGATCTGTGCAAATTGAAT+TGG | 0.398389 | 8_2:+3763518 | None:intergenic |
| TTTATCAAAGAGCAAAGAAT+AGG | 0.400002 | 8_2:+3763488 | None:intergenic |
| CCAATTGGGGTTGGGTTACA+GGG | 0.404670 | 8_2:-3763177 | Msa1228290:three_prime_UTR |
| TATCACATTGCAGTGCTATA+GGG | 0.405423 | 8_2:+3762959 | None:intergenic |
| CCTTTATCATGCTCTTCATT+GGG | 0.406357 | 8_2:+3764113 | None:intergenic |
| AAAGATTAATTTCCTATGTC+AGG | 0.406425 | 8_2:-3763832 | Msa1228290:CDS |
| CCATATGTGGGCTTTAGAAA+AGG | 0.410319 | 8_2:-3763721 | Msa1228290:CDS |
| GGGCTATGGGTTTACGTGAA+TGG | 0.411227 | 8_2:-3764196 | Msa1228290:CDS |
| ACTATCATTAATGTTACATA+TGG | 0.411660 | 8_2:+3763126 | None:intergenic |
| TTATCGATGATGAGGTTGAT+AGG | 0.413270 | 8_2:-3764637 | Msa1228290:CDS |
| ATGTTTGGTATGATGTTTGT+AGG | 0.414620 | 8_2:-3764547 | Msa1228290:CDS |
| TTGTGAATTTGGATTTCCTT+GGG | 0.415023 | 8_2:-3764825 | Msa1228290:CDS |
| AAAAGTGTCCAAAAGCTCTA+AGG | 0.419374 | 8_2:+3763797 | None:intergenic |
| CCAGATTATAAGTCAACCTT+TGG | 0.419776 | 8_2:+3763278 | None:intergenic |
| ATTCAATCCCTAAATGTAGA+AGG | 0.419800 | 8_2:+3763925 | None:intergenic |
| AGTGATGGTAAGGGGAAGAT+AGG | 0.419950 | 8_2:-3764500 | Msa1228290:CDS |
| ATCTGATCGGCAAAAGCATA+AGG | 0.420610 | 8_2:+3765771 | None:intergenic |
| TTTGTGAATTTGGATTTCCT+TGG | 0.421861 | 8_2:-3764826 | Msa1228290:CDS |
| GCAACATCACTTTCAATTTG+CGG | 0.422663 | 8_2:+3765943 | None:intergenic |
| CATATGTGGGCTTTAGAAAA+GGG | 0.423473 | 8_2:-3763720 | Msa1228290:CDS |
| ATACATTGCCAATTGGGGTT+GGG | 0.425672 | 8_2:-3763185 | Msa1228290:three_prime_UTR |
| TTCAATTTGCGGTGAAGTGC+AGG | 0.426353 | 8_2:+3765954 | None:intergenic |
| TATACATTGCCAATTGGGGT+TGG | 0.426875 | 8_2:-3763186 | Msa1228290:three_prime_UTR |
| ACCCATAGCCCTCATCAGAT+TGG | 0.427036 | 8_2:+3764208 | None:intergenic |
| CCAAAGGTTGACTTATAATC+TGG | 0.430874 | 8_2:-3763278 | Msa1228290:three_prime_UTR |
| CCCAATCTGATGAGGGCTAT+GGG | 0.435992 | 8_2:-3764209 | Msa1228290:CDS |
| TGAGTTCTGTCATGATGTAT+AGG | 0.444477 | 8_2:-3763347 | Msa1228290:three_prime_UTR |
| TTTGTAATGTGCAAATTGTT+GGG | 0.448783 | 8_2:-3764706 | Msa1228290:CDS |
| ATCGATAAATCCTCCTTCTT+CGG | 0.449831 | 8_2:+3764652 | None:intergenic |
| GATTTGGGAGGGTGTGTTGA+AGG | 0.450135 | 8_2:-3764578 | Msa1228290:CDS |
| AATTTCCTATGTCAGGATAT+GGG | 0.450989 | 8_2:-3763825 | Msa1228290:CDS |
| GGAATGGATTCTAAAGGTCT+TGG | 0.453391 | 8_2:-3764287 | Msa1228290:CDS |
| AAGAACTATGCTCATGCGTT+GGG | 0.457899 | 8_2:-3764254 | Msa1228290:CDS |
| AAAAGTGGTTCTGAGATAAA+GGG | 0.465819 | 8_2:-3764758 | Msa1228290:CDS |
| TTGAAGGGAATGTGGATGTT+TGG | 0.467882 | 8_2:-3764562 | Msa1228290:CDS |
| AGAAGAGGAGTTGATTGAAA+AGG | 0.470802 | 8_2:-3764435 | Msa1228290:CDS |
| GGATTTCCTTGGGATAAGCT+TGG | 0.474458 | 8_2:-3764815 | Msa1228290:CDS |
| CCCATAGCCCTCATCAGATT+GGG | 0.475310 | 8_2:+3764209 | None:intergenic |
| AAACTATTCCATTGCAAGCA+TGG | 0.484064 | 8_2:-3763685 | Msa1228290:CDS |
| TCCCAATCTGATGAGGGCTA+TGG | 0.486736 | 8_2:-3764210 | Msa1228290:CDS |
| ACTTATAATCTGGTACTACA+TGG | 0.490214 | 8_2:-3763268 | Msa1228290:three_prime_UTR |
| GATTCTTGAGTATGGAGAAG+AGG | 0.500875 | 8_2:-3764450 | Msa1228290:CDS |
| CGAGGTTCAGATTCCATATG+TGG | 0.503568 | 8_2:-3763734 | Msa1228290:CDS |
| ATTTGGGAGGGTGTGTTGAA+GGG | 0.510382 | 8_2:-3764577 | Msa1228290:CDS |
| GAAGAACTATGCTCATGCGT+TGG | 0.510932 | 8_2:-3764255 | Msa1228290:CDS |
| AGCATAAGGGATGGATCTTG+TGG | 0.512701 | 8_2:+3765785 | None:intergenic |
| AAAGAGTCATATAGATTCAA+AGG | 0.514350 | 8_2:+3763316 | None:intergenic |
| TTATGATTTGAGTGATGGTA+AGG | 0.517430 | 8_2:-3764510 | Msa1228290:CDS |
| AGGGTGTGTTGAAGGGAATG+TGG | 0.519392 | 8_2:-3764570 | Msa1228290:CDS |
| GGGAAGATAGGTGAACTCAT+TGG | 0.519466 | 8_2:-3764488 | Msa1228290:CDS |
| ATTTGCGGTGAAGTGCAGGC+AGG | 0.520172 | 8_2:+3765958 | None:intergenic |
| AAGTCAAAACATATAAATGC+CGG | 0.520806 | 8_2:+3763774 | None:intergenic |
| TAAGGTTGGTGTGATGATGT+TGG | 0.525262 | 8_2:+3765893 | None:intergenic |
| CACATTGGAATGGATTCTAA+AGG | 0.534379 | 8_2:-3764293 | Msa1228290:CDS |
| ACCCGGCTGCTCCAAAACAT+TGG | 0.539925 | 8_2:-3763617 | Msa1228290:CDS |
| GTTGCTTTCTGATTTGAGGT+TGG | 0.540360 | 8_2:-3764615 | Msa1228290:CDS |
| CGATCAGATGAATGAATGAA+AGG | 0.541131 | 8_2:-3765992 | Msa1228290:exon |
| CAAGTTTCTTGTGGCGACAA+GGG | 0.543532 | 8_2:+3765850 | None:intergenic |
| TTCTTATACATTGCCAATTG+GGG | 0.544657 | 8_2:-3763190 | Msa1228290:three_prime_UTR |
| TCTGATCGGCAAAAGCATAA+GGG | 0.549804 | 8_2:+3765772 | None:intergenic |
| GACAATTATTATGGCACTGA+GGG | 0.552306 | 8_2:-3762696 | Msa1228290:three_prime_UTR |
| TTAAGGCAATTCATGATGCA+AGG | 0.553764 | 8_2:-3764076 | Msa1228290:CDS |
| GCTGTTGAAACACATTGGAA+TGG | 0.554139 | 8_2:-3764303 | Msa1228290:CDS |
| CGAATCTTCCCAATCTGATG+AGG | 0.559311 | 8_2:-3764217 | Msa1228290:CDS |
| GCAAGTTTCTTGTGGCGACA+AGG | 0.559841 | 8_2:+3765849 | None:intergenic |
| GTGTGCACGCACAAGTGTGT+GGG | 0.566019 | 8_2:+3763226 | None:intergenic |
| CATGATAAAGGTTATCAAAG+TGG | 0.567037 | 8_2:-3764101 | Msa1228290:CDS |
| TTTGCGGTGAAGTGCAGGCA+GGG | 0.567208 | 8_2:+3765959 | None:intergenic |
| TTGTAGATTCAGTGTCGAGA+AGG | 0.567935 | 8_2:-3764402 | Msa1228290:CDS |
| AGTGTCCCATATCCTGACAT+AGG | 0.569168 | 8_2:+3763820 | None:intergenic |
| AGTCGCAACCATGCTTGCAA+TGG | 0.573982 | 8_2:+3763677 | None:intergenic |
| GGTGTGATTTATACAGAGAG+TGG | 0.574645 | 8_2:-3764794 | Msa1228290:CDS |
| ATGATTTGAGTGATGGTAAG+GGG | 0.577556 | 8_2:-3764508 | Msa1228290:CDS |
| TGTGTGCACGCACAAGTGTG+TGG | 0.578666 | 8_2:+3763225 | None:intergenic |
| GACAATTATTAATGGACGGA+GGG | 0.579845 | 8_2:+3762918 | None:intergenic |
| AGGAGGATTTATCGATGATG+AGG | 0.580749 | 8_2:-3764645 | Msa1228290:CDS |
| TACAAAGTGTTGTCAAGTAG+TGG | 0.582011 | 8_2:-3762991 | Msa1228290:three_prime_UTR |
| AATATCTTAAATCACATGCA+TGG | 0.582398 | 8_2:-3763981 | Msa1228290:CDS |
| ATAGCTCGGTTGATTCTACA+AGG | 0.584030 | 8_2:-3764374 | Msa1228290:CDS |
| AATTTACTCATATTGTGAGA+CGG | 0.584295 | 8_2:+3764050 | None:intergenic |
| AAAATTCAAACTCATTGATG+GGG | 0.586544 | 8_2:+3764954 | None:intergenic |
| TATGATTTGAGTGATGGTAA+GGG | 0.587020 | 8_2:-3764509 | Msa1228290:CDS |
| AAGGGATGGATCTTGTGGAA+TGG | 0.590760 | 8_2:+3765790 | None:intergenic |
| CATGGTTGCGACTAGTGACA+AGG | 0.592546 | 8_2:-3763667 | Msa1228290:CDS |
| TAGATTCAGTGTCGAGAAGG+AGG | 0.595864 | 8_2:-3764399 | Msa1228290:CDS |
| ATCGGCAAAAGCATAAGGGA+TGG | 0.596160 | 8_2:+3765776 | None:intergenic |
| ATGTGACAATTATTAATGGA+CGG | 0.601171 | 8_2:+3762914 | None:intergenic |
| GTGACACTGCAAGTTTCTTG+TGG | 0.612434 | 8_2:+3765841 | None:intergenic |
| TGTAAGATAGTAATAGCCAA+AGG | 0.616401 | 8_2:-3763294 | Msa1228290:three_prime_UTR |
| AGTCCAATATTGTCAAGTAG+TGG | 0.618749 | 8_2:-3763069 | Msa1228290:three_prime_UTR |
| TTGAAGCTGTTGAAACACAT+TGG | 0.621474 | 8_2:-3764308 | Msa1228290:CDS |
| GAATCTTCCCAATCTGATGA+GGG | 0.621938 | 8_2:-3764216 | Msa1228290:CDS |
| ATCACACCAAGCTTATCCCA+AGG | 0.624221 | 8_2:+3764809 | None:intergenic |
| CACATATGGAATCTGAACCT+CGG | 0.628454 | 8_2:+3763735 | None:intergenic |
| AGATAGGTGAACTCATTGGA+AGG | 0.629844 | 8_2:-3764484 | Msa1228290:CDS |
| CTTATAATCTGGTACTACAT+GGG | 0.638930 | 8_2:-3763267 | Msa1228290:three_prime_UTR |
| TGTGCACGCACAAGTGTGTG+GGG | 0.644919 | 8_2:+3763227 | None:intergenic |
| CAAATTGAATTGGAAAACAA+TGG | 0.658596 | 8_2:+3763528 | None:intergenic |
| GTGGTTCTGAGATAAAGGGT+AGG | 0.659181 | 8_2:-3764754 | Msa1228290:CDS |
| TGACAATTATTAATGGACGG+AGG | 0.660040 | 8_2:+3762917 | None:intergenic |
| TCGAGAAGGAGGAAATAGCT+CGG | 0.662293 | 8_2:-3764388 | Msa1228290:CDS |
| GAGGTTCAGATTCCATATGT+GGG | 0.667584 | 8_2:-3763733 | Msa1228290:CDS |
| TAGAGAACCGAATTAAGCCG+AGG | 0.677310 | 8_2:-3763752 | Msa1228290:CDS |
| ATGGTTGCGACTAGTGACAA+GGG | 0.685800 | 8_2:-3763666 | Msa1228290:CDS |
| TGACAATTATTATGGCACTG+AGG | 0.708195 | 8_2:-3762697 | Msa1228290:three_prime_UTR |
| AAGTAGTGGCTATAGCGCAG+TGG | 0.712669 | 8_2:-3763055 | Msa1228290:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATAAAAAAAAAAATTGG+AGG | + | chr8_2:3763152-3763171 | None:intergenic | 10.0% |
| !!! | ATTGATCAAATTTTTTGAAA+TGG | - | chr8_2:3763530-3763549 | Msa1228290:three_prime_UTR | 15.0% |
| !!! | TATTTCTAATTACACAATTT+TGG | + | chr8_2:3763560-3763579 | None:intergenic | 15.0% |
| !! | AAATTGTGTAATTAGAAATA+AGG | - | chr8_2:3763560-3763579 | Msa1228290:exon | 15.0% |
| !! | AATTGTGTAATTAGAAATAA+GGG | - | chr8_2:3763561-3763580 | Msa1228290:exon | 15.0% |
| !!! | AAAGCAAGATAAATATTTTT+AGG | + | chr8_2:3765243-3765262 | None:intergenic | 15.0% |
| !!! | ATTTTATCCTTATAAACTAT+TGG | - | chr8_2:3765860-3765879 | Msa1228290:CDS | 15.0% |
| !! | GTGTAAAATTTATTCCAAAA+TGG | - | chr8_2:3763100-3763119 | Msa1228290:three_prime_UTR | 20.0% |
| !!! | AATCCTAGAATTGATTTTTA+AGG | - | chr8_2:3763192-3763211 | Msa1228290:three_prime_UTR | 20.0% |
| !!! | AAAATTGATTTTGACATGTT+TGG | - | chr8_2:3763304-3763323 | Msa1228290:three_prime_UTR | 20.0% |
| !!! | TTCTAGAATTAACTATCTTT+TGG | - | chr8_2:3763398-3763417 | Msa1228290:three_prime_UTR | 20.0% |
| !!! | TGTTGAGAATCTTTAAAAAT+AGG | + | chr8_2:3763436-3763455 | None:intergenic | 20.0% |
| !! | TTTAAAGATTCTCAACAATT+AGG | - | chr8_2:3763439-3763458 | Msa1228290:three_prime_UTR | 20.0% |
| !!! | TAGTAATAATAATGCAGTTT+TGG | + | chr8_2:3763622-3763641 | None:intergenic | 20.0% |
| !! | AAAACTGCATTATTATTACT+AGG | - | chr8_2:3763621-3763640 | Msa1228290:CDS | 20.0% |
| !! | AAAAATTCAAACTCATTGAT+GGG | + | chr8_2:3763742-3763761 | None:intergenic | 20.0% |
| !!! | TTAACTTTTCCTTTTGTTTT+TGG | - | chr8_2:3764015-3764034 | Msa1228290:CDS | 20.0% |
| !! | TTAAATTTCATGCATACTAT+TGG | - | chr8_2:3764663-3764682 | Msa1228290:CDS | 20.0% |
| !! | ACTATCATTAATGTTACATA+TGG | + | chr8_2:3765569-3765588 | None:intergenic | 20.0% |
| !! | TCATATGTGACAATTATTAA+TGG | + | chr8_2:3765785-3765804 | None:intergenic | 20.0% |
| !!! | TTCATTCTCTTTTATTTATC+AGG | + | chr8_2:3765831-3765850 | None:intergenic | 20.0% |
| !! | AATACAACCAATAGTTTATA+AGG | + | chr8_2:3765870-3765889 | None:intergenic | 20.0% |
| !!! | GATTAAAAGATTCTCTTTTT+TGG | + | chr8_2:3765920-3765939 | None:intergenic | 20.0% |
| !!! | AGAGAATCTTTTAATCTTTT+TGG | - | chr8_2:3765924-3765943 | Msa1228290:CDS | 20.0% |
| !!! | GAGAATCTTTTAATCTTTTT+GGG | - | chr8_2:3765925-3765944 | Msa1228290:CDS | 20.0% |
| !!! | TTTCTTTTTTGAGGAGTTTA+AGG | + | chr8_2:3762820-3762839 | None:intergenic | 25.0% |
| !!! | TGAATTTTTGGAAATCTGAT+CGG | + | chr8_2:3762937-3762956 | None:intergenic | 25.0% |
| !! | GAGAGAATGAAATGAATTTT+TGG | + | chr8_2:3762949-3762968 | None:intergenic | 25.0% |
| ! | TCTAATCTCATTTCAAAGTT+GGG | - | chr8_2:3762969-3762988 | Msa1228290:three_prime_UTR | 25.0% |
| !!! | TTCTTTTTCACCAAAAAACT+TGG | - | chr8_2:3762992-3763011 | Msa1228290:three_prime_UTR | 25.0% |
| !! | CAAGAACTTTTCAACTTTTT+TGG | + | chr8_2:3763027-3763046 | None:intergenic | 25.0% |
| ! | AAAAAGTTGAAAAGTTCTTG+AGG | - | chr8_2:3763027-3763046 | Msa1228290:three_prime_UTR | 25.0% |
| !! | GGTAATGTTATTAGATTTTC+TGG | - | chr8_2:3763048-3763067 | Msa1228290:three_prime_UTR | 25.0% |
| !! | ATTTTCTGGATTTGTATGTT+TGG | - | chr8_2:3763062-3763081 | Msa1228290:three_prime_UTR | 25.0% |
| ! | TGTCCTTAAAAATCAATTCT+AGG | + | chr8_2:3763198-3763217 | None:intergenic | 25.0% |
| ! | TGACCTAACATAAAATAGAA+TGG | + | chr8_2:3763465-3763484 | None:intergenic | 25.0% |
| !!! | GATCAAATTTTTTGAAATGG+AGG | - | chr8_2:3763533-3763552 | Msa1228290:three_prime_UTR | 25.0% |
| !!! | TGATTATCTGTTTTGTTAAC+AGG | - | chr8_2:3763710-3763729 | Msa1228290:CDS | 25.0% |
| ! | AAAATTCAAACTCATTGATG+GGG | + | chr8_2:3763741-3763760 | None:intergenic | 25.0% |
| ! | GAAAAATTCAAACTCATTGA+TGG | + | chr8_2:3763743-3763762 | None:intergenic | 25.0% |
| !!! | GAATTTTTCTTTGAAAGCAT+TGG | - | chr8_2:3763754-3763773 | Msa1228290:CDS | 25.0% |
| ! | CAAAAAAAGAACTTATCGTT+CGG | + | chr8_2:3763811-3763830 | None:intergenic | 25.0% |
| !! | CTTTGTTTGTTGAAAAGATA+TGG | - | chr8_2:3763961-3763980 | Msa1228290:CDS | 25.0% |
| !! | TTTTGTAATGTGCAAATTGT+TGG | - | chr8_2:3763985-3764004 | Msa1228290:CDS | 25.0% |
| ! | TTTGTAATGTGCAAATTGTT+GGG | - | chr8_2:3763986-3764005 | Msa1228290:CDS | 25.0% |
| !!! | GTGTTTTTGGATTTTGATTT+GGG | - | chr8_2:3764099-3764118 | Msa1228290:CDS | 25.0% |
| ! | AAACATTTGATTCTTGAGTA+TGG | - | chr8_2:3764234-3764253 | Msa1228290:CDS | 25.0% |
| !!! | ATGGTTTTTCGATAAAATCA+AGG | - | chr8_2:3764515-3764534 | Msa1228290:CDS | 25.0% |
| !!! | TTTTTCGATAAAATCAAGGA+TGG | - | chr8_2:3764519-3764538 | Msa1228290:CDS | 25.0% |
| !! | TTTTCGATAAAATCAAGGAT+GGG | - | chr8_2:3764520-3764539 | Msa1228290:CDS | 25.0% |
| ! | AATTTACTCATATTGTGAGA+CGG | + | chr8_2:3764645-3764664 | None:intergenic | 25.0% |
| !! | CATGTGATTTAAGATATTCA+TGG | + | chr8_2:3764709-3764728 | None:intergenic | 25.0% |
| ! | AATATCTTAAATCACATGCA+TGG | - | chr8_2:3764711-3764730 | Msa1228290:CDS | 25.0% |
| ! | AAAGATTAATTTCCTATGTC+AGG | - | chr8_2:3764860-3764879 | Msa1228290:CDS | 25.0% |
| ! | AAGTCAAAACATATAAATGC+CGG | + | chr8_2:3764921-3764940 | None:intergenic | 25.0% |
| ! | CAAATTGAATTGGAAAACAA+TGG | + | chr8_2:3765167-3765186 | None:intergenic | 25.0% |
| ! | TTTATCAAAGAGCAAAGAAT+AGG | + | chr8_2:3765207-3765226 | None:intergenic | 25.0% |
| ! | AAAGAGTCATATAGATTCAA+AGG | + | chr8_2:3765379-3765398 | None:intergenic | 25.0% |
| ! | ATGTGACAATTATTAATGGA+CGG | + | chr8_2:3765781-3765800 | None:intergenic | 25.0% |
| !!! | TTTTGGGACAAATAATCTTT+TGG | - | chr8_2:3765941-3765960 | Msa1228290:CDS | 25.0% |
| !!! | TTTGGGACAAATAATCTTTT+GGG | - | chr8_2:3765942-3765961 | Msa1228290:CDS | 25.0% |
| ! | AGCAAATGTGACAATTATTA+TGG | - | chr8_2:3765987-3766006 | Msa1228290:exon | 25.0% |
| !!! | TTTTTTGAGGAGTTTAAGGT+TGG | + | chr8_2:3762816-3762835 | None:intergenic | 30.0% |
| !! | ACAAGGGATTTTCTTTTTTG+AGG | + | chr8_2:3762829-3762848 | None:intergenic | 30.0% |
| CTCTAATCTCATTTCAAAGT+TGG | - | chr8_2:3762968-3762987 | Msa1228290:three_prime_UTR | 30.0% | |
| !!! | GTGAAAGAATCCAAGTTTTT+TGG | + | chr8_2:3763005-3763024 | None:intergenic | 30.0% |
| ! | TACTAGAGAGAAATCCATTT+TGG | + | chr8_2:3763117-3763136 | None:intergenic | 30.0% |
| ! | AACCAAGTTTCAATTTTGGA+AGG | - | chr8_2:3763258-3763277 | Msa1228290:three_prime_UTR | 30.0% |
| ! | AGGCCATTCTATTTTATGTT+AGG | - | chr8_2:3763459-3763478 | Msa1228290:three_prime_UTR | 30.0% |
| !! | ATTTTGACCATCCAATTTGA+TGG | + | chr8_2:3763505-3763524 | None:intergenic | 30.0% |
| ! | TACTGACAAAACAGCAATTT+TGG | + | chr8_2:3763589-3763608 | None:intergenic | 30.0% |
| !!! | AATTGCTGTTTTGTCAGTAT+TGG | - | chr8_2:3763590-3763609 | Msa1228290:CDS | 30.0% |
| !!! | ATTGCTGTTTTGTCAGTATT+GGG | - | chr8_2:3763591-3763610 | Msa1228290:CDS | 30.0% |
| TTTGTGAATTTGGATTTCCT+TGG | - | chr8_2:3763866-3763885 | Msa1228290:CDS | 30.0% | |
| TTGTGAATTTGGATTTCCTT+GGG | - | chr8_2:3763867-3763886 | Msa1228290:CDS | 30.0% | |
| !! | GGTTTTATGTTTAGGAAAAG+TGG | - | chr8_2:3763919-3763938 | Msa1228290:CDS | 30.0% |
| !! | AAAAGTGGTTCTGAGATAAA+GGG | - | chr8_2:3763934-3763953 | Msa1228290:CDS | 30.0% |
| !!! | GGTGTTTTTGGATTTTGATT+TGG | - | chr8_2:3764098-3764117 | Msa1228290:CDS | 30.0% |
| !!! | TTTTTGGATTTTGATTTGGG+AGG | - | chr8_2:3764102-3764121 | Msa1228290:CDS | 30.0% |
| !!! | TTTTGGATTTTGATTTGGGA+GGG | - | chr8_2:3764103-3764122 | Msa1228290:CDS | 30.0% |
| ATGTTTGGTATGATGTTTGT+AGG | - | chr8_2:3764145-3764164 | Msa1228290:CDS | 30.0% | |
| ! | GTGTTTTATGATTTGAGTGA+TGG | - | chr8_2:3764177-3764196 | Msa1228290:CDS | 30.0% |
| TTATGATTTGAGTGATGGTA+AGG | - | chr8_2:3764182-3764201 | Msa1228290:CDS | 30.0% | |
| TATGATTTGAGTGATGGTAA+GGG | - | chr8_2:3764183-3764202 | Msa1228290:CDS | 30.0% | |
| CATGATAAAGGTTATCAAAG+TGG | - | chr8_2:3764591-3764610 | Msa1228290:CDS | 30.0% | |
| !! | AGGTTATCAAAGTGGTTTTA+AGG | - | chr8_2:3764599-3764618 | Msa1228290:CDS | 30.0% |
| TTTGATTGCCTTCTACATTT+AGG | - | chr8_2:3764759-3764778 | Msa1228290:CDS | 30.0% | |
| TTGATTGCCTTCTACATTTA+GGG | - | chr8_2:3764760-3764779 | Msa1228290:CDS | 30.0% | |
| ATTCAATCCCTAAATGTAGA+AGG | + | chr8_2:3764770-3764789 | None:intergenic | 30.0% | |
| !!! | ATCTTTTTCTCTAGAGTTTC+AGG | + | chr8_2:3764846-3764865 | None:intergenic | 30.0% |
| TAATTTCCTATGTCAGGATA+TGG | - | chr8_2:3764866-3764885 | Msa1228290:CDS | 30.0% | |
| AATTTCCTATGTCAGGATAT+GGG | - | chr8_2:3764867-3764886 | Msa1228290:CDS | 30.0% | |
| ! | AATTGCTCAAACCAATGTTT+TGG | + | chr8_2:3765089-3765108 | None:intergenic | 30.0% |
| CATGAAGCTCGAAATTTATT+GGG | + | chr8_2:3765116-3765135 | None:intergenic | 30.0% | |
| TCATGAAGCTCGAAATTTAT+TGG | + | chr8_2:3765117-3765136 | None:intergenic | 30.0% | |
| TGTAAGATAGTAATAGCCAA+AGG | - | chr8_2:3765398-3765417 | Msa1228290:intron | 30.0% | |
| ACTTATAATCTGGTACTACA+TGG | - | chr8_2:3765424-3765443 | Msa1228290:intron | 30.0% | |
| CTTATAATCTGGTACTACAT+GGG | - | chr8_2:3765425-3765444 | Msa1228290:intron | 30.0% | |
| CTTCTTATACATTGCCAATT+GGG | - | chr8_2:3765501-3765520 | Msa1228290:intron | 30.0% | |
| TTCTTATACATTGCCAATTG+GGG | - | chr8_2:3765502-3765521 | Msa1228290:intron | 30.0% | |
| CGATCAGATGAATGAATGAA+AGG | - | chr8_2:3762700-3762719 | Msa1228290:three_prime_UTR | 35.0% | |
| GCAACATCACTTTCAATTTG+CGG | + | chr8_2:3762752-3762771 | None:intergenic | 35.0% | |
| ! | TGGAACAGAAATGTCGTTTA+AGG | + | chr8_2:3762782-3762801 | None:intergenic | 35.0% |
| ! | GCAGAACCAAGTTTCAATTT+TGG | - | chr8_2:3763254-3763273 | Msa1228290:three_prime_UTR | 35.0% |
| GTCCTTCCAAAATTGAAACT+TGG | + | chr8_2:3763263-3763282 | None:intergenic | 35.0% | |
| AAGCTAGAATTTGTAGCTGT+TGG | - | chr8_2:3763374-3763393 | Msa1228290:three_prime_UTR | 35.0% | |
| !!! | TTGCTGTTTTGTCAGTATTG+GGG | - | chr8_2:3763592-3763611 | Msa1228290:CDS | 35.0% |
| ATCAGAGAGAGTAACAAATG+AGG | + | chr8_2:3763694-3763713 | None:intergenic | 35.0% | |
| !!! | CAGAGAGTGGTTTTATGTTT+AGG | - | chr8_2:3763911-3763930 | Msa1228290:CDS | 35.0% |
| !! | GAAAAGTGGTTCTGAGATAA+AGG | - | chr8_2:3763933-3763952 | Msa1228290:CDS | 35.0% |
| ATCGATAAATCCTCCTTCTT+CGG | + | chr8_2:3764043-3764062 | None:intergenic | 35.0% | |
| ! | TTATCGATGATGAGGTTGAT+AGG | - | chr8_2:3764055-3764074 | Msa1228290:CDS | 35.0% |
| ! | ATAGGTTGCTTTCTGATTTG+AGG | - | chr8_2:3764073-3764092 | Msa1228290:CDS | 35.0% |
| !!! | TGATTTGAGGTTGGTGTTTT+TGG | - | chr8_2:3764086-3764105 | Msa1228290:CDS | 35.0% |
| ATGATTTGAGTGATGGTAAG+GGG | - | chr8_2:3764184-3764203 | Msa1228290:CDS | 35.0% | |
| ! | AGAAGAGGAGTTGATTGAAA+AGG | - | chr8_2:3764257-3764276 | Msa1228290:CDS | 35.0% |
| AGAGTTGTTGAGTCTCAATT+TGG | - | chr8_2:3764344-3764363 | Msa1228290:CDS | 35.0% | |
| TTGAAGCTGTTGAAACACAT+TGG | - | chr8_2:3764384-3764403 | Msa1228290:CDS | 35.0% | |
| ! | CACATTGGAATGGATTCTAA+AGG | - | chr8_2:3764399-3764418 | Msa1228290:CDS | 35.0% |
| TGCGTTGGGAACAATAAAAA+TGG | - | chr8_2:3764452-3764471 | Msa1228290:CDS | 35.0% | |
| ! | TGGGAATCATAAGCTTTTAG+TGG | - | chr8_2:3764539-3764558 | Msa1228290:CDS | 35.0% |
| CCTTTATCATGCTCTTCATT+GGG | + | chr8_2:3764582-3764601 | None:intergenic | 35.0% | |
| ACCTTTATCATGCTCTTCAT+TGG | + | chr8_2:3764583-3764602 | None:intergenic | 35.0% | |
| TTAAGGCAATTCATGATGCA+AGG | - | chr8_2:3764616-3764635 | Msa1228290:CDS | 35.0% | |
| !! | TTCATGCATACTATTGGCTT+TGG | - | chr8_2:3764669-3764688 | Msa1228290:CDS | 35.0% |
| !!! | GGATTTTGGCTTAGAATCTT+TGG | + | chr8_2:3764825-3764844 | None:intergenic | 35.0% |
| !!! | TCTCTAGAGTTTCAGGATTT+TGG | + | chr8_2:3764839-3764858 | None:intergenic | 35.0% |
| !! | AAAAGTGTCCAAAAGCTCTA+AGG | + | chr8_2:3764898-3764917 | None:intergenic | 35.0% |
| !! | CATATGTGGGCTTTAGAAAA+GGG | - | chr8_2:3764972-3764991 | Msa1228290:intron | 35.0% |
| AAACTATTCCATTGCAAGCA+TGG | - | chr8_2:3765007-3765026 | Msa1228290:intron | 35.0% | |
| !! | CCGGGTGAATTTTAAAAACA+CGG | + | chr8_2:3765061-3765080 | None:intergenic | 35.0% |
| !!! | CCGTGTTTTTAAAATTCACC+CGG | - | chr8_2:3765058-3765077 | Msa1228290:intron | 35.0% |
| GAGATCTGTGCAAATTGAAT+TGG | + | chr8_2:3765177-3765196 | None:intergenic | 35.0% | |
| TGAGTTCTGTCATGATGTAT+AGG | - | chr8_2:3765345-3765364 | Msa1228290:intron | 35.0% | |
| CCAGATTATAAGTCAACCTT+TGG | + | chr8_2:3765417-3765436 | None:intergenic | 35.0% | |
| ! | CCAAAGGTTGACTTATAATC+TGG | - | chr8_2:3765414-3765433 | Msa1228290:intron | 35.0% |
| GCTTCTTATACATTGCCAAT+TGG | - | chr8_2:3765500-3765519 | Msa1228290:intron | 35.0% | |
| AGTCCAATATTGTCAAGTAG+TGG | - | chr8_2:3765623-3765642 | Msa1228290:intron | 35.0% | |
| TAGCCACTACTTGACAATAT+TGG | + | chr8_2:3765629-3765648 | None:intergenic | 35.0% | |
| !! | TACAAAGTGTTGTCAAGTAG+TGG | - | chr8_2:3765701-3765720 | Msa1228290:CDS | 35.0% |
| TATCACATTGCAGTGCTATA+GGG | + | chr8_2:3765736-3765755 | None:intergenic | 35.0% | |
| ! | GACAATTATTAATGGACGGA+GGG | + | chr8_2:3765777-3765796 | None:intergenic | 35.0% |
| ! | TGACAATTATTAATGGACGG+AGG | + | chr8_2:3765778-3765797 | None:intergenic | 35.0% |
| TGACAATTATTATGGCACTG+AGG | - | chr8_2:3765995-3766014 | Msa1228290:exon | 35.0% | |
| !! | TAAGGTTGGTGTGATGATGT+TGG | + | chr8_2:3762802-3762821 | None:intergenic | 40.0% |
| ! | TCTGATCGGCAAAAGCATAA+GGG | + | chr8_2:3762923-3762942 | None:intergenic | 40.0% |
| ! | ATCTGATCGGCAAAAGCATA+AGG | + | chr8_2:3762924-3762943 | None:intergenic | 40.0% |
| ! | TGTTTGGTTTCACGTTCTAG+AGG | - | chr8_2:3763078-3763097 | Msa1228290:three_prime_UTR | 40.0% |
| !!! | TGCTGTTTTGTCAGTATTGG+GGG | - | chr8_2:3763593-3763612 | Msa1228290:CDS | 40.0% |
| GCTTGTGTGCTTTGTGAATT+TGG | - | chr8_2:3763856-3763875 | Msa1228290:CDS | 40.0% | |
| GGTGTGATTTATACAGAGAG+TGG | - | chr8_2:3763898-3763917 | Msa1228290:CDS | 40.0% | |
| TCTTCGGCACCAAAAACAAA+AGG | + | chr8_2:3764027-3764046 | None:intergenic | 40.0% | |
| !!! | TTTGTTTTTGGTGCCGAAGA+AGG | - | chr8_2:3764027-3764046 | Msa1228290:CDS | 40.0% |
| AGGAGGATTTATCGATGATG+AGG | - | chr8_2:3764047-3764066 | Msa1228290:CDS | 40.0% | |
| ! | GTTGCTTTCTGATTTGAGGT+TGG | - | chr8_2:3764077-3764096 | Msa1228290:CDS | 40.0% |
| TTGAAGGGAATGTGGATGTT+TGG | - | chr8_2:3764130-3764149 | Msa1228290:CDS | 40.0% | |
| AGATAGGTGAACTCATTGGA+AGG | - | chr8_2:3764208-3764227 | Msa1228290:CDS | 40.0% | |
| GATTCTTGAGTATGGAGAAG+AGG | - | chr8_2:3764242-3764261 | Msa1228290:CDS | 40.0% | |
| ! | TTGTAGATTCAGTGTCGAGA+AGG | - | chr8_2:3764290-3764309 | Msa1228290:CDS | 40.0% |
| ! | ATAGCTCGGTTGATTCTACA+AGG | - | chr8_2:3764318-3764337 | Msa1228290:CDS | 40.0% |
| GCTGTTGAAACACATTGGAA+TGG | - | chr8_2:3764389-3764408 | Msa1228290:CDS | 40.0% | |
| ! | GGAATGGATTCTAAAGGTCT+TGG | - | chr8_2:3764405-3764424 | Msa1228290:CDS | 40.0% |
| AAGAACTATGCTCATGCGTT+GGG | - | chr8_2:3764438-3764457 | Msa1228290:CDS | 40.0% | |
| GAATCTTCCCAATCTGATGA+GGG | - | chr8_2:3764476-3764495 | Msa1228290:CDS | 40.0% | |
| ! | CCCAATGAAGAGCATGATAA+AGG | - | chr8_2:3764579-3764598 | Msa1228290:CDS | 40.0% |
| ! | AGAGCTTTTGGACACTTTTC+CGG | - | chr8_2:3764899-3764918 | Msa1228290:CDS | 40.0% |
| ATCTGAACCTCGGCTTAATT+CGG | + | chr8_2:3764950-3764969 | None:intergenic | 40.0% | |
| CACATATGGAATCTGAACCT+CGG | + | chr8_2:3764960-3764979 | None:intergenic | 40.0% | |
| GAGGTTCAGATTCCATATGT+GGG | - | chr8_2:3764959-3764978 | Msa1228290:CDS | 40.0% | |
| !!! | CCTTTTCTAAAGCCCACATA+TGG | + | chr8_2:3764974-3764993 | None:intergenic | 40.0% |
| !! | CCATATGTGGGCTTTAGAAA+AGG | - | chr8_2:3764971-3764990 | Msa1228290:intron | 40.0% |
| !! | ACTAGTGACAAGGGTTTTGT+TGG | - | chr8_2:3765035-3765054 | Msa1228290:intron | 40.0% |
| TATACATTGCCAATTGGGGT+TGG | - | chr8_2:3765506-3765525 | Msa1228290:intron | 40.0% | |
| ATACATTGCCAATTGGGGTT+GGG | - | chr8_2:3765507-3765526 | Msa1228290:intron | 40.0% | |
| CTATCACATTGCAGTGCTAT+AGG | + | chr8_2:3765737-3765756 | None:intergenic | 40.0% | |
| TTCAATTTGCGGTGAAGTGC+AGG | + | chr8_2:3762741-3762760 | None:intergenic | 45.0% | |
| CAAGTTTCTTGTGGCGACAA+GGG | + | chr8_2:3762845-3762864 | None:intergenic | 45.0% | |
| GTGACACTGCAAGTTTCTTG+TGG | + | chr8_2:3762854-3762873 | None:intergenic | 45.0% | |
| AAGGGATGGATCTTGTGGAA+TGG | + | chr8_2:3762905-3762924 | None:intergenic | 45.0% | |
| AGCATAAGGGATGGATCTTG+TGG | + | chr8_2:3762910-3762929 | None:intergenic | 45.0% | |
| ! | ATCGGCAAAAGCATAAGGGA+TGG | + | chr8_2:3762919-3762938 | None:intergenic | 45.0% |
| AAATTGCCGCGCCATCAAAT+TGG | - | chr8_2:3763491-3763510 | Msa1228290:three_prime_UTR | 45.0% | |
| !! | GCTGTTTTGTCAGTATTGGG+GGG | - | chr8_2:3763594-3763613 | Msa1228290:CDS | 45.0% |
| !! | CTGTTTTGTCAGTATTGGGG+GGG | - | chr8_2:3763595-3763614 | Msa1228290:CDS | 45.0% |
| GGATTTCCTTGGGATAAGCT+TGG | - | chr8_2:3763877-3763896 | Msa1228290:CDS | 45.0% | |
| ATCACACCAAGCTTATCCCA+AGG | + | chr8_2:3763886-3763905 | None:intergenic | 45.0% | |
| !! | GTGGTTCTGAGATAAAGGGT+AGG | - | chr8_2:3763938-3763957 | Msa1228290:CDS | 45.0% |
| ! | ATTTGGGAGGGTGTGTTGAA+GGG | - | chr8_2:3764115-3764134 | Msa1228290:CDS | 45.0% |
| AGTGATGGTAAGGGGAAGAT+AGG | - | chr8_2:3764192-3764211 | Msa1228290:CDS | 45.0% | |
| GGGAAGATAGGTGAACTCAT+TGG | - | chr8_2:3764204-3764223 | Msa1228290:CDS | 45.0% | |
| ! | TAGATTCAGTGTCGAGAAGG+AGG | - | chr8_2:3764293-3764312 | Msa1228290:CDS | 45.0% |
| TCGAGAAGGAGGAAATAGCT+CGG | - | chr8_2:3764304-3764323 | Msa1228290:CDS | 45.0% | |
| GAAGAACTATGCTCATGCGT+TGG | - | chr8_2:3764437-3764456 | Msa1228290:CDS | 45.0% | |
| CGAATCTTCCCAATCTGATG+AGG | - | chr8_2:3764475-3764494 | Msa1228290:CDS | 45.0% | |
| AGTGTCCCATATCCTGACAT+AGG | + | chr8_2:3764875-3764894 | None:intergenic | 45.0% | |
| TAGAGAACCGAATTAAGCCG+AGG | - | chr8_2:3764940-3764959 | Msa1228290:CDS | 45.0% | |
| CGAGGTTCAGATTCCATATG+TGG | - | chr8_2:3764958-3764977 | Msa1228290:CDS | 45.0% | |
| ATGGTTGCGACTAGTGACAA+GGG | - | chr8_2:3765026-3765045 | Msa1228290:intron | 45.0% | |
| !!! | AACCAATGTTTTGGAGCAGC+CGG | + | chr8_2:3765080-3765099 | None:intergenic | 45.0% |
| !! | GTTTAAATAAAAAAAAAAAT+TGG | + | chr8_2:3763155-3763174 | None:intergenic | 5.0% |
| GCAAGTTTCTTGTGGCGACA+AGG | + | chr8_2:3762846-3762865 | None:intergenic | 50.0% | |
| !! | GACCATCCAATTTGATGGCG+CGG | + | chr8_2:3763500-3763519 | None:intergenic | 50.0% |
| !!! | GTTTTTGGTGCCGAAGAAGG+AGG | - | chr8_2:3764030-3764049 | Msa1228290:CDS | 50.0% |
| ! | GATTTGGGAGGGTGTGTTGA+AGG | - | chr8_2:3764114-3764133 | Msa1228290:CDS | 50.0% |
| AGGGTGTGTTGAAGGGAATG+TGG | - | chr8_2:3764122-3764141 | Msa1228290:CDS | 50.0% | |
| TCCCAATCTGATGAGGGCTA+TGG | - | chr8_2:3764482-3764501 | Msa1228290:CDS | 50.0% | |
| CCCATAGCCCTCATCAGATT+GGG | + | chr8_2:3764486-3764505 | None:intergenic | 50.0% | |
| CCCAATCTGATGAGGGCTAT+GGG | - | chr8_2:3764483-3764502 | Msa1228290:CDS | 50.0% | |
| ACCCATAGCCCTCATCAGAT+TGG | + | chr8_2:3764487-3764506 | None:intergenic | 50.0% | |
| GGGCTATGGGTTTACGTGAA+TGG | - | chr8_2:3764496-3764515 | Msa1228290:CDS | 50.0% | |
| ! | GGGACACTCCTTAGAGCTTT+TGG | - | chr8_2:3764887-3764906 | Msa1228290:CDS | 50.0% |
| AGTCGCAACCATGCTTGCAA+TGG | + | chr8_2:3765018-3765037 | None:intergenic | 50.0% | |
| CATGGTTGCGACTAGTGACA+AGG | - | chr8_2:3765025-3765044 | Msa1228290:intron | 50.0% | |
| !!! | ACCAATGTTTTGGAGCAGCC+GGG | + | chr8_2:3765079-3765098 | None:intergenic | 50.0% |
| CCAATTGGGGTTGGGTTACA+GGG | - | chr8_2:3765515-3765534 | Msa1228290:intron | 50.0% | |
| AAGTAGTGGCTATAGCGCAG+TGG | - | chr8_2:3765637-3765656 | Msa1228290:intron | 50.0% | |
| TTTGCGGTGAAGTGCAGGCA+GGG | + | chr8_2:3762736-3762755 | None:intergenic | 55.0% | |
| ATTTGCGGTGAAGTGCAGGC+AGG | + | chr8_2:3762737-3762756 | None:intergenic | 55.0% | |
| TGCCGCGCCATCAAATTGGA+TGG | - | chr8_2:3763495-3763514 | Msa1228290:three_prime_UTR | 55.0% | |
| ACCCGGCTGCTCCAAAACAT+TGG | - | chr8_2:3765075-3765094 | Msa1228290:intron | 55.0% | |
| TGTGCACGCACAAGTGTGTG+GGG | + | chr8_2:3765468-3765487 | None:intergenic | 55.0% | |
| GTGTGCACGCACAAGTGTGT+GGG | + | chr8_2:3765469-3765488 | None:intergenic | 55.0% | |
| TGTGTGCACGCACAAGTGTG+TGG | + | chr8_2:3765470-3765489 | None:intergenic | 55.0% | |
| GCCAATTGGGGTTGGGTTAC+AGG | - | chr8_2:3765514-3765533 | Msa1228290:intron | 55.0% | |
| CCCTGTAACCCAACCCCAAT+TGG | + | chr8_2:3765518-3765537 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 3762696 | 3766018 | 3762696 | ID=Msa1228290;Name=Msa1228290 |
| chr8_2 | mRNA | 3762696 | 3766018 | 3762696 | ID=Msa1228290-mRNA-1;Parent=Msa1228290;Name=Msa1228290-mRNA-1;_AED=0.20;_eAED=0.20;_QI=15|1|1|1|1|1|2|882|580 |
| chr8_2 | exon | 3762696 | 3764982 | 3762696 | ID=Msa1228290-mRNA-1:exon:1170;Parent=Msa1228290-mRNA-1 |
| chr8_2 | exon | 3765666 | 3766018 | 3765666 | ID=Msa1228290-mRNA-1:exon:1169;Parent=Msa1228290-mRNA-1 |
| chr8_2 | five_prime_UTR | 3766004 | 3766018 | 3766004 | ID=Msa1228290-mRNA-1:five_prime_utr;Parent=Msa1228290-mRNA-1 |
| chr8_2 | CDS | 3765666 | 3766003 | 3765666 | ID=Msa1228290-mRNA-1:cds;Parent=Msa1228290-mRNA-1 |
| chr8_2 | CDS | 3763578 | 3764982 | 3763578 | ID=Msa1228290-mRNA-1:cds;Parent=Msa1228290-mRNA-1 |
| chr8_2 | three_prime_UTR | 3762696 | 3763577 | 3762696 | ID=Msa1228290-mRNA-1:three_prime_utr;Parent=Msa1228290-mRNA-1 |
| Gene Sequence |
| Protein sequence |
