Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0878290 | XP_013451521.2 | 91.707 | 410 | 28 | 1 | 1 | 410 | 1 | 404 | 0.0 | 771 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0878290 | sp|Q9LFQ0|GT14B_ARATH | 51.966 | 356 | 161 | 3 | 56 | 410 | 88 | 434 | 3.31e-132 | 389 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0878290 | A0A396HBP4 | 91.707 | 410 | 28 | 1 | 1 | 410 | 1 | 404 | 0.0 | 771 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003700 | Msa0878290 | 0.832634 | 8.451422e-56 | -8.615850e-47 |
| Msa0007480 | Msa0878290 | 0.825042 | 5.815422e-54 | -8.615850e-47 |
| Msa0008340 | Msa0878290 | 0.809278 | 2.047349e-50 | -8.615850e-47 |
| Msa0009760 | Msa0878290 | 0.827478 | 1.530552e-54 | -8.615850e-47 |
| Msa0016670 | Msa0878290 | 0.802497 | 5.454052e-49 | -8.615850e-47 |
| Msa0017510 | Msa0878290 | 0.852070 | 5.875397e-61 | -8.615850e-47 |
| Msa0028640 | Msa0878290 | 0.801050 | 1.080822e-48 | -8.615850e-47 |
| Msa0040450 | Msa0878290 | 0.831504 | 1.608151e-55 | -8.615850e-47 |
| Msa0046100 | Msa0878290 | 0.816528 | 5.278172e-52 | -8.615850e-47 |
| Msa0047050 | Msa0878290 | 0.807978 | 3.881747e-50 | -8.615850e-47 |
| Msa0047070 | Msa0878290 | 0.827300 | 1.687941e-54 | -8.615850e-47 |
| Msa0053780 | Msa0878290 | 0.829383 | 5.309003e-55 | -8.615850e-47 |
| Msa0061340 | Msa0878290 | 0.814183 | 1.754135e-51 | -8.615850e-47 |
| Msa0069330 | Msa0878290 | 0.835785 | 1.370821e-56 | -8.615850e-47 |
| Msa0072370 | Msa0878290 | 0.811993 | 5.301561e-51 | -8.615850e-47 |
| Msa0073670 | Msa0878290 | 0.820714 | 5.928410e-53 | -8.615850e-47 |
| Msa0078650 | Msa0878290 | 0.806311 | 8.747549e-50 | -8.615850e-47 |
| Msa0094850 | Msa0878290 | 0.802714 | 4.921711e-49 | -8.615850e-47 |
| Msa0104550 | Msa0878290 | 0.836874 | 7.246464e-57 | -8.615850e-47 |
| Msa0110970 | Msa0878290 | 0.857971 | 1.134705e-62 | -8.615850e-47 |
| Msa0118570 | Msa0878290 | 0.820170 | 7.901261e-53 | -8.615850e-47 |
| Msa0620230 | Msa0878290 | 0.800223 | 1.593939e-48 | -8.615850e-47 |
| Msa0620240 | Msa0878290 | 0.801695 | 7.974673e-49 | -8.615850e-47 |
| Msa0641190 | Msa0878290 | 0.806937 | 6.453871e-50 | -8.615850e-47 |
| Msa0643890 | Msa0878290 | 0.802570 | 5.269646e-49 | -8.615850e-47 |
| Msa0648880 | Msa0878290 | 0.816651 | 4.955864e-52 | -8.615850e-47 |
| Msa0655560 | Msa0878290 | 0.832686 | 8.205249e-56 | -8.615850e-47 |
| Msa0657750 | Msa0878290 | 0.800011 | 1.760517e-48 | -8.615850e-47 |
| Msa0657970 | Msa0878290 | 0.805641 | 1.209955e-49 | -8.615850e-47 |
| Msa0663390 | Msa0878290 | 0.811399 | 7.139675e-51 | -8.615850e-47 |
| Msa0667050 | Msa0878290 | 0.815384 | 9.501733e-52 | -8.615850e-47 |
| Msa0669320 | Msa0878290 | 0.809633 | 1.718502e-50 | -8.615850e-47 |
| Msa0683570 | Msa0878290 | 0.822351 | 2.481761e-53 | -8.615850e-47 |
| Msa0683730 | Msa0878290 | 0.816783 | 4.628495e-52 | -8.615850e-47 |
| Msa0684500 | Msa0878290 | 0.816954 | 4.236699e-52 | -8.615850e-47 |
| Msa0691380 | Msa0878290 | 0.820986 | 5.132439e-53 | -8.615850e-47 |
| Msa0693380 | Msa0878290 | 0.809621 | 1.728627e-50 | -8.615850e-47 |
| Msa0702350 | Msa0878290 | 0.816587 | 5.120418e-52 | -8.615850e-47 |
| Msa0702570 | Msa0878290 | 0.802344 | 5.867178e-49 | -8.615850e-47 |
| Msa0702680 | Msa0878290 | 0.811338 | 7.359810e-51 | -8.615850e-47 |
| Msa0703050 | Msa0878290 | 0.822595 | 2.178086e-53 | -8.615850e-47 |
| Msa0705870 | Msa0878290 | 0.811293 | 7.525334e-51 | -8.615850e-47 |
| Msa0708520 | Msa0878290 | 0.808097 | 3.662053e-50 | -8.615850e-47 |
| Msa0723990 | Msa0878290 | 0.805414 | 1.350328e-49 | -8.615850e-47 |
| Msa0727710 | Msa0878290 | 0.810206 | 1.293160e-50 | -8.615850e-47 |
| Msa0729720 | Msa0878290 | 0.803868 | 2.837960e-49 | -8.615850e-47 |
| Msa0740640 | Msa0878290 | 0.812614 | 3.880664e-51 | -8.615850e-47 |
| Msa0760380 | Msa0878290 | 0.810835 | 9.460887e-51 | -8.615850e-47 |
| Msa0762210 | Msa0878290 | 0.810886 | 9.221484e-51 | -8.615850e-47 |
| Msa0764570 | Msa0878290 | 0.810422 | 1.162044e-50 | -8.615850e-47 |
| Msa0767300 | Msa0878290 | 0.800231 | 1.587743e-48 | -8.615850e-47 |
| Msa0769920 | Msa0878290 | 0.800769 | 1.233706e-48 | -8.615850e-47 |
| Msa0770080 | Msa0878290 | 0.803484 | 3.410822e-49 | -8.615850e-47 |
| Msa0770720 | Msa0878290 | 0.819397 | 1.186906e-52 | -8.615850e-47 |
| Msa0806800 | Msa0878290 | 0.814100 | 1.829245e-51 | -8.615850e-47 |
| Msa0816710 | Msa0878290 | 0.804249 | 2.365358e-49 | -8.615850e-47 |
| Msa0821760 | Msa0878290 | 0.807687 | 4.474565e-50 | -8.615850e-47 |
| Msa0824680 | Msa0878290 | 0.813515 | 2.461542e-51 | -8.615850e-47 |
| Msa0828560 | Msa0878290 | 0.818594 | 1.806868e-52 | -8.615850e-47 |
| Msa0841940 | Msa0878290 | 0.801229 | 9.936240e-49 | -8.615850e-47 |
| Msa0124340 | Msa0878290 | 0.819861 | 9.298477e-53 | -8.615850e-47 |
| Msa0126370 | Msa0878290 | 0.800104 | 1.685749e-48 | -8.615850e-47 |
| Msa0134610 | Msa0878290 | 0.800617 | 1.324891e-48 | -8.615850e-47 |
| Msa0140780 | Msa0878290 | 0.815840 | 7.523623e-52 | -8.615850e-47 |
| Msa0142950 | Msa0878290 | 0.810187 | 1.305683e-50 | -8.615850e-47 |
| Msa0144360 | Msa0878290 | 0.810279 | 1.247364e-50 | -8.615850e-47 |
| Msa0146260 | Msa0878290 | 0.836553 | 8.745891e-57 | -8.615850e-47 |
| Msa0148100 | Msa0878290 | 0.832313 | 1.014907e-55 | -8.615850e-47 |
| Msa0150570 | Msa0878290 | 0.833105 | 6.453972e-56 | -8.615850e-47 |
| Msa0152400 | Msa0878290 | 0.830208 | 3.342253e-55 | -8.615850e-47 |
| Msa0157290 | Msa0878290 | 0.852090 | 5.798476e-61 | -8.615850e-47 |
| Msa0159930 | Msa0878290 | 0.808818 | 2.568863e-50 | -8.615850e-47 |
| Msa0171290 | Msa0878290 | 0.822446 | 2.358880e-53 | -8.615850e-47 |
| Msa0173890 | Msa0878290 | 0.800776 | 1.229656e-48 | -8.615850e-47 |
| Msa0195630 | Msa0878290 | 0.815956 | 7.085648e-52 | -8.615850e-47 |
| Msa0197930 | Msa0878290 | 0.804658 | 1.943729e-49 | -8.615850e-47 |
| Msa0200260 | Msa0878290 | 0.814600 | 1.418928e-51 | -8.615850e-47 |
| Msa0225680 | Msa0878290 | 0.812793 | 3.545882e-51 | -8.615850e-47 |
| Msa0237310 | Msa0878290 | 0.803484 | 3.410822e-49 | -8.615850e-47 |
| Msa0237410 | Msa0878290 | 0.809448 | 1.882432e-50 | -8.615850e-47 |
| Msa0369850 | Msa0878290 | 0.810860 | 9.341172e-51 | -8.615850e-47 |
| Msa0376350 | Msa0878290 | 0.824857 | 6.429842e-54 | -8.615850e-47 |
| Msa0388960 | Msa0878290 | 0.814031 | 1.894565e-51 | -8.615850e-47 |
| Msa0389340 | Msa0878290 | 0.807969 | 3.899019e-50 | -8.615850e-47 |
| Msa0403850 | Msa0878290 | 0.829434 | 5.157907e-55 | -8.615850e-47 |
| Msa0403910 | Msa0878290 | 0.803956 | 2.721190e-49 | -8.615850e-47 |
| Msa0410500 | Msa0878290 | 0.852695 | 3.899680e-61 | -8.615850e-47 |
| Msa0410650 | Msa0878290 | 0.864752 | 9.695786e-65 | -8.615850e-47 |
| Msa0417270 | Msa0878290 | 0.816730 | 4.757110e-52 | -8.615850e-47 |
| Msa0417880 | Msa0878290 | 0.831097 | 2.024796e-55 | -8.615850e-47 |
| Msa0422850 | Msa0878290 | 0.825876 | 3.689569e-54 | -8.615850e-47 |
| Msa0422930 | Msa0878290 | 0.824806 | 6.610978e-54 | -8.615850e-47 |
| Msa0423040 | Msa0878290 | 0.826038 | 3.377100e-54 | -8.615850e-47 |
| Msa0424790 | Msa0878290 | 0.813567 | 2.397592e-51 | -8.615850e-47 |
| Msa0428150 | Msa0878290 | 0.802380 | 5.766633e-49 | -8.615850e-47 |
| Msa0439970 | Msa0878290 | 0.806813 | 6.854206e-50 | -8.615850e-47 |
| Msa0440750 | Msa0878290 | 0.807439 | 5.053068e-50 | -8.615850e-47 |
| Msa0452960 | Msa0878290 | 0.805568 | 1.253723e-49 | -8.615850e-47 |
| Msa0461720 | Msa0878290 | 0.808275 | 3.354688e-50 | -8.615850e-47 |
| Msa0467430 | Msa0878290 | 0.810931 | 9.015939e-51 | -8.615850e-47 |
| Msa0468290 | Msa0878290 | 0.810961 | 8.885165e-51 | -8.615850e-47 |
| Msa0469030 | Msa0878290 | 0.817383 | 3.392913e-52 | -8.615850e-47 |
| Msa0474950 | Msa0878290 | 0.825710 | 4.040446e-54 | -8.615850e-47 |
| Msa0475790 | Msa0878290 | 0.847167 | 1.372154e-59 | -8.615850e-47 |
| Msa0479170 | Msa0878290 | 0.829806 | 4.189080e-55 | -8.615850e-47 |
| Msa0481530 | Msa0878290 | 0.813834 | 2.094454e-51 | -8.615850e-47 |
| Msa0243100 | Msa0878290 | 0.837270 | 5.740044e-57 | -8.615850e-47 |
| Msa0244860 | Msa0878290 | 0.824554 | 7.581101e-54 | -8.615850e-47 |
| Msa0255090 | Msa0878290 | 0.810980 | 8.800791e-51 | -8.615850e-47 |
| Msa0258310 | Msa0878290 | 0.809275 | 2.051052e-50 | -8.615850e-47 |
| Msa0259380 | Msa0878290 | 0.805032 | 1.623559e-49 | -8.615850e-47 |
| Msa0261340 | Msa0878290 | 0.807974 | 3.888687e-50 | -8.615850e-47 |
| Msa0262340 | Msa0878290 | 0.803244 | 3.824128e-49 | -8.615850e-47 |
| Msa0270100 | Msa0878290 | 0.800776 | 1.229573e-48 | -8.615850e-47 |
| Msa0274730 | Msa0878290 | 0.802387 | 5.747426e-49 | -8.615850e-47 |
| Msa0283450 | Msa0878290 | 0.832136 | 1.122624e-55 | -8.615850e-47 |
| Msa0283520 | Msa0878290 | 0.839016 | 2.038734e-57 | -8.615850e-47 |
| Msa0284410 | Msa0878290 | 0.824868 | 6.391934e-54 | -8.615850e-47 |
| Msa0287650 | Msa0878290 | 0.849975 | 2.289029e-60 | -8.615850e-47 |
| Msa0292400 | Msa0878290 | 0.815722 | 7.993116e-52 | -8.615850e-47 |
| Msa0294160 | Msa0878290 | 0.813199 | 2.888651e-51 | -8.615850e-47 |
| Msa0297790 | Msa0878290 | 0.814330 | 1.627771e-51 | -8.615850e-47 |
| Msa0299890 | Msa0878290 | 0.800125 | 1.669074e-48 | -8.615850e-47 |
| Msa0300690 | Msa0878290 | 0.816957 | 4.230622e-52 | -8.615850e-47 |
| Msa0302000 | Msa0878290 | 0.805698 | 1.177124e-49 | -8.615850e-47 |
| Msa0305700 | Msa0878290 | 0.813434 | 2.564724e-51 | -8.615850e-47 |
| Msa0308830 | Msa0878290 | 0.806251 | 9.006377e-50 | -8.615850e-47 |
| Msa0311700 | Msa0878290 | 0.801097 | 1.057247e-48 | -8.615850e-47 |
| Msa0315530 | Msa0878290 | 0.809711 | 1.652974e-50 | -8.615850e-47 |
| Msa0322690 | Msa0878290 | 0.824201 | 9.173992e-54 | -8.615850e-47 |
| Msa0332000 | Msa0878290 | 0.841880 | 3.633884e-58 | -8.615850e-47 |
| Msa0333920 | Msa0878290 | 0.802621 | 5.143960e-49 | -8.615850e-47 |
| Msa0334040 | Msa0878290 | 0.827632 | 1.405443e-54 | -8.615850e-47 |
| Msa0335800 | Msa0878290 | 0.800244 | 1.578070e-48 | -8.615850e-47 |
| Msa0341540 | Msa0878290 | 0.816063 | 6.707877e-52 | -8.615850e-47 |
| Msa0345970 | Msa0878290 | 0.800607 | 1.331048e-48 | -8.615850e-47 |
| Msa0357290 | Msa0878290 | 0.805159 | 1.527252e-49 | -8.615850e-47 |
| Msa0484780 | Msa0878290 | 0.819590 | 1.072056e-52 | -8.615850e-47 |
| Msa0488560 | Msa0878290 | 0.818925 | 1.519921e-52 | -8.615850e-47 |
| Msa0495320 | Msa0878290 | 0.817832 | 2.687554e-52 | -8.615850e-47 |
| Msa0498060 | Msa0878290 | 0.820208 | 7.743627e-53 | -8.615850e-47 |
| Msa0507680 | Msa0878290 | 0.863771 | 1.961611e-64 | -8.615850e-47 |
| Msa0509610 | Msa0878290 | 0.839873 | 1.221315e-57 | -8.615850e-47 |
| Msa0513160 | Msa0878290 | 0.810602 | 1.062556e-50 | -8.615850e-47 |
| Msa0516170 | Msa0878290 | 0.802663 | 5.041094e-49 | -8.615850e-47 |
| Msa0523460 | Msa0878290 | 0.822081 | 2.867167e-53 | -8.615850e-47 |
| Msa0542520 | Msa0878290 | 0.809008 | 2.339267e-50 | -8.615850e-47 |
| Msa0546680 | Msa0878290 | 0.818825 | 1.601570e-52 | -8.615850e-47 |
| Msa0547890 | Msa0878290 | 0.808197 | 3.485561e-50 | -8.615850e-47 |
| Msa0550430 | Msa0878290 | 0.807033 | 6.157923e-50 | -8.615850e-47 |
| Msa0556060 | Msa0878290 | 0.800593 | 1.339868e-48 | -8.615850e-47 |
| Msa0557070 | Msa0878290 | 0.805856 | 1.090679e-49 | -8.615850e-47 |
| Msa0560080 | Msa0878290 | 0.802056 | 6.723388e-49 | -8.615850e-47 |
| Msa0562220 | Msa0878290 | 0.801643 | 8.172202e-49 | -8.615850e-47 |
| Msa0571140 | Msa0878290 | 0.805400 | 1.359740e-49 | -8.615850e-47 |
| Msa0574890 | Msa0878290 | 0.829246 | 5.729859e-55 | -8.615850e-47 |
| Msa0576880 | Msa0878290 | 0.825298 | 5.059693e-54 | -8.615850e-47 |
| Msa0585300 | Msa0878290 | 0.808240 | 3.412782e-50 | -8.615850e-47 |
| Msa0585560 | Msa0878290 | 0.804905 | 1.726288e-49 | -8.615850e-47 |
| Msa0601750 | Msa0878290 | 0.808420 | 3.125307e-50 | -8.615850e-47 |
| Msa0844240 | Msa0878290 | 0.814881 | 1.229123e-51 | -8.615850e-47 |
| Msa0844570 | Msa0878290 | 0.800701 | 1.273610e-48 | -8.615850e-47 |
| Msa0856920 | Msa0878290 | 0.805469 | 1.314952e-49 | -8.615850e-47 |
| Msa0866270 | Msa0878290 | 0.810706 | 1.008868e-50 | -8.615850e-47 |
| Msa0869100 | Msa0878290 | 0.801088 | 1.062032e-48 | -8.615850e-47 |
| Msa0878290 | Msa0880140 | 0.850038 | 2.198211e-60 | -8.615850e-47 |
| Msa0878290 | Msa0880440 | 0.802333 | 5.895352e-49 | -8.615850e-47 |
| Msa0878290 | Msa0908050 | 0.804907 | 1.724061e-49 | -8.615850e-47 |
| Msa0878290 | Msa0909230 | 0.800584 | 1.345465e-48 | -8.615850e-47 |
| Msa0878290 | Msa0924470 | 0.809370 | 1.957091e-50 | -8.615850e-47 |
| Msa0878290 | Msa0930780 | 0.824455 | 7.997587e-54 | -8.615850e-47 |
| Msa0878290 | Msa0933230 | 0.807150 | 5.816589e-50 | -8.615850e-47 |
| Msa0878290 | Msa0933310 | 0.802446 | 5.587548e-49 | -8.615850e-47 |
| Msa0878290 | Msa0936410 | 0.800513 | 1.391536e-48 | -8.615850e-47 |
| Msa0878290 | Msa0944030 | 0.852156 | 5.554115e-61 | -8.615850e-47 |
| Msa0878290 | Msa0945110 | 0.813505 | 2.474100e-51 | -8.615850e-47 |
| Msa0878290 | Msa0952120 | 0.815540 | 8.774594e-52 | -8.615850e-47 |
| Msa0878290 | Msa0968590 | 0.800715 | 1.265557e-48 | -8.615850e-47 |
| Msa0878290 | Msa0969520 | 0.802376 | 5.776517e-49 | -8.615850e-47 |
| Msa0878290 | Msa0971090 | 0.806378 | 8.469744e-50 | -8.615850e-47 |
| Msa0878290 | Msa0974060 | 0.809321 | 2.004458e-50 | -8.615850e-47 |
| Msa0878290 | Msa0980310 | 0.813419 | 2.584881e-51 | -8.615850e-47 |
| Msa0878290 | Msa1004550 | 0.804958 | 1.682799e-49 | -8.615850e-47 |
| Msa0878290 | Msa1009750 | 0.806652 | 7.413045e-50 | -8.615850e-47 |
| Msa0878290 | Msa1012810 | 0.809036 | 2.307899e-50 | -8.615850e-47 |
| Msa0878290 | Msa1013770 | 0.816262 | 6.054773e-52 | -8.615850e-47 |
| Msa0878290 | Msa1019000 | 0.803812 | 2.916048e-49 | -8.615850e-47 |
| Msa0878290 | Msa1029250 | 0.827589 | 1.438918e-54 | -8.615850e-47 |
| Msa0878290 | Msa1031930 | 0.812002 | 5.277340e-51 | -8.615850e-47 |
| Msa0878290 | Msa1041670 | 0.806481 | 8.056781e-50 | -8.615850e-47 |
| Msa0878290 | Msa1050910 | 0.805174 | 1.515899e-49 | -8.615850e-47 |
| Msa0878290 | Msa1059960 | 0.822523 | 2.263214e-53 | -8.615850e-47 |
| Msa0878290 | Msa1063950 | 0.850523 | 1.607535e-60 | -8.615850e-47 |
| Msa0878290 | Msa1082500 | 0.840797 | 7.003902e-58 | -8.615850e-47 |
| Msa0878290 | Msa1085200 | 0.862895 | 3.665325e-64 | -8.615850e-47 |
| Msa0878290 | Msa1097820 | 0.801420 | 9.081567e-49 | -8.615850e-47 |
| Msa0878290 | Msa1099910 | 0.809972 | 1.452660e-50 | -8.615850e-47 |
| Msa0878290 | Msa1102770 | 0.804483 | 2.114192e-49 | -8.615850e-47 |
| Msa0878290 | Msa1105160 | 0.807463 | 4.993373e-50 | -8.615850e-47 |
| Msa0878290 | Msa1108160 | 0.840998 | 6.201674e-58 | -8.615850e-47 |
| Msa0878290 | Msa1111110 | 0.824858 | 6.427609e-54 | -8.615850e-47 |
| Msa0878290 | Msa1111130 | 0.826148 | 3.179960e-54 | -8.615850e-47 |
| Msa0878290 | Msa1121440 | 0.806061 | 9.877272e-50 | -8.615850e-47 |
| Msa0878290 | Msa1125000 | 0.806437 | 8.230808e-50 | -8.615850e-47 |
| Msa0878290 | Msa1133000 | 0.802646 | 5.082645e-49 | -8.615850e-47 |
| Msa0878290 | Msa1140210 | 0.817449 | 3.279392e-52 | -8.615850e-47 |
| Msa0878290 | Msa1147900 | 0.807742 | 4.357501e-50 | -8.615850e-47 |
| Msa0878290 | Msa1151910 | 0.852926 | 3.350252e-61 | -8.615850e-47 |
| Msa0878290 | Msa1154710 | 0.830582 | 2.708552e-55 | -8.615850e-47 |
| Msa0878290 | Msa1157870 | 0.801651 | 8.142886e-49 | -8.615850e-47 |
| Msa0878290 | Msa1166560 | 0.806154 | 9.441006e-50 | -8.615850e-47 |
| Msa0878290 | Msa1172450 | 0.802888 | 4.531320e-49 | -8.615850e-47 |
| Msa0878290 | Msa1179940 | 0.816021 | 6.852942e-52 | -8.615850e-47 |
| Msa0878290 | Msa1179970 | 0.809621 | 1.728395e-50 | -8.615850e-47 |
| Msa0878290 | Msa1189070 | 0.810901 | 9.152963e-51 | -8.615850e-47 |
| Msa0878290 | Msa1199570 | 0.812242 | 4.679666e-51 | -8.615850e-47 |
| Msa0878290 | Msa1201470 | 0.817463 | 3.255043e-52 | -8.615850e-47 |
| Msa0878290 | Msa1202190 | 0.810978 | 8.810415e-51 | -8.615850e-47 |
| Msa0878290 | Msa1209460 | 0.820937 | 5.266523e-53 | -8.615850e-47 |
| Msa0878290 | Msa1214890 | 0.815397 | 9.439702e-52 | -8.615850e-47 |
| Msa0878290 | Msa1224830 | 0.815978 | 7.007841e-52 | -8.615850e-47 |
| Msa0878290 | Msa1236100 | 0.823033 | 1.722165e-53 | -8.615850e-47 |
| Msa0878290 | Msa1242220 | 0.813177 | 2.921118e-51 | -8.615850e-47 |
| Msa0878290 | Msa1242230 | 0.810191 | 1.303372e-50 | -8.615850e-47 |
| Msa0878290 | Msa1242240 | 0.820737 | 5.854888e-53 | -8.615850e-47 |
| Msa0878290 | Msa1252190 | 0.814586 | 1.428441e-51 | -8.615850e-47 |
| Msa0878290 | Msa1272900 | 0.806642 | 7.449264e-50 | -8.615850e-47 |
| Msa0878290 | Msa1276660 | 0.811995 | 5.295438e-51 | -8.615850e-47 |
| Msa0878290 | Msa1283840 | 0.809718 | 1.647514e-50 | -8.615850e-47 |
| Msa0878290 | Msa1283860 | 0.811656 | 6.276099e-51 | -8.615850e-47 |
| Msa0878290 | Msa1284260 | 0.822323 | 2.518588e-53 | -8.615850e-47 |
| Msa0878290 | Msa1284550 | 0.813878 | 2.047828e-51 | -8.615850e-47 |
| Msa0878290 | Msa1292830 | 0.825519 | 4.484661e-54 | -8.615850e-47 |
| Msa0878290 | Msa1293770 | 0.819920 | 9.015385e-53 | -8.615850e-47 |
| Msa0878290 | Msa1303250 | 0.804901 | 1.729239e-49 | -8.615850e-47 |
| Msa0878290 | Msa1308380 | 0.816187 | 6.293165e-52 | -8.615850e-47 |
| Msa0878290 | Msa1313150 | 0.811964 | 5.380377e-51 | -8.615850e-47 |
| Msa0878290 | Msa1320740 | 0.826817 | 2.202758e-54 | -8.615850e-47 |
| Msa0878290 | Msa1322860 | 0.811678 | 6.209952e-51 | -8.615850e-47 |
| Msa0878290 | Msa1322890 | 0.807039 | 6.139395e-50 | -8.615850e-47 |
| Msa0878290 | Msa1324500 | 0.818249 | 2.163267e-52 | -8.615850e-47 |
| Msa0878290 | Msa1327050 | 0.810864 | 9.322586e-51 | -8.615850e-47 |
| Msa0878290 | Msa1327680 | 0.804943 | 1.694919e-49 | -8.615850e-47 |
| Msa0878290 | Msa1328710 | 0.813373 | 2.644672e-51 | -8.615850e-47 |
| Msa0878290 | Msa1343070 | 0.818226 | 2.188859e-52 | -8.615850e-47 |
| Msa0878290 | Msa1346730 | 0.801126 | 1.043209e-48 | -8.615850e-47 |
| Msa0878290 | Msa1353980 | 0.806856 | 6.712768e-50 | -8.615850e-47 |
| Msa0878290 | Msa1372760 | 0.817270 | 3.598498e-52 | -8.615850e-47 |
| Msa0878290 | Msa1373330 | 0.810195 | 1.300340e-50 | -8.615850e-47 |
| Msa0878290 | Msa1374040 | 0.843127 | 1.696262e-58 | -8.615850e-47 |
| Msa0878290 | Msa1374550 | 0.825274 | 5.126407e-54 | -8.615850e-47 |
| Msa0878290 | Msa1375560 | 0.804629 | 1.970378e-49 | -8.615850e-47 |
| Msa0878290 | Msa1390800 | 0.822844 | 1.905398e-53 | -8.615850e-47 |
| Msa0878290 | Msa1402400 | 0.807357 | 5.257389e-50 | -8.615850e-47 |
| Msa0878290 | Msa1409870 | 0.833757 | 4.440232e-56 | -8.615850e-47 |
| Msa0878290 | Msa1422580 | 0.817035 | 4.063328e-52 | -8.615850e-47 |
| Msa0878290 | Msa1423880 | 0.813159 | 2.948151e-51 | -8.615850e-47 |
| Msa0878290 | Msa1439610 | 0.810302 | 1.233027e-50 | -8.615850e-47 |
| Msa0878290 | Msa1445190 | 0.811844 | 5.714160e-51 | -8.615850e-47 |
| Msa0878290 | Msa1452120 | 0.815305 | 9.895646e-52 | -8.615850e-47 |
| Msa0878290 | Msa1459180 | 0.836069 | 1.161534e-56 | -8.615850e-47 |
| Msa0878290 | Msa1460020 | 0.831585 | 1.535346e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0878290 | MtrunA17_Chr6g0460801 | 91.707 | 410 | 28 | 1 | 1 | 410 | 1 | 404 | 0.0 | 771 |
| Msa0878290 | MtrunA17_Chr7g0254121 | 67.805 | 410 | 121 | 4 | 1 | 410 | 1 | 399 | 0.0 | 561 |
| Msa0878290 | MtrunA17_Chr6g0452631 | 49.721 | 358 | 170 | 4 | 53 | 409 | 84 | 432 | 4.80e-129 | 379 |
| Msa0878290 | MtrunA17_Chr4g0022501 | 50.538 | 372 | 172 | 7 | 39 | 409 | 72 | 432 | 5.92e-128 | 375 |
| Msa0878290 | MtrunA17_Chr4g0010141 | 49.438 | 356 | 170 | 4 | 56 | 410 | 73 | 419 | 4.20e-126 | 370 |
| Msa0878290 | MtrunA17_Chr2g0317441 | 48.315 | 356 | 169 | 5 | 56 | 410 | 83 | 424 | 5.68e-120 | 355 |
| Msa0878290 | MtrunA17_Chr4g0063621 | 45.333 | 375 | 164 | 5 | 36 | 409 | 54 | 388 | 3.79e-111 | 331 |
| Msa0878290 | MtrunA17_Chr1g0208381 | 42.857 | 364 | 191 | 6 | 52 | 410 | 46 | 397 | 7.12e-98 | 298 |
| Msa0878290 | MtrunA17_Chr1g0169461 | 42.737 | 358 | 192 | 4 | 53 | 409 | 93 | 438 | 1.10e-93 | 288 |
| Msa0878290 | MtrunA17_Chr4g0002191 | 37.845 | 362 | 215 | 4 | 50 | 410 | 55 | 407 | 3.39e-76 | 242 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0878290 | AT3G03690.1 | 63.526 | 329 | 110 | 3 | 22 | 350 | 24 | 342 | 2.89e-149 | 428 |
| Msa0878290 | AT5G15050.1 | 51.966 | 356 | 161 | 3 | 56 | 410 | 88 | 434 | 3.37e-133 | 389 |
| Msa0878290 | AT4G27480.2 | 50.843 | 356 | 160 | 4 | 56 | 410 | 80 | 421 | 8.08e-131 | 383 |
| Msa0878290 | AT4G27480.3 | 50.843 | 356 | 160 | 4 | 56 | 410 | 80 | 421 | 8.08e-131 | 383 |
| Msa0878290 | AT4G27480.1 | 50.843 | 356 | 160 | 4 | 56 | 410 | 80 | 421 | 8.08e-131 | 383 |
| Msa0878290 | AT5G39990.1 | 50.418 | 359 | 168 | 4 | 53 | 410 | 98 | 447 | 2.44e-129 | 380 |
| Msa0878290 | AT1G03520.2 | 50.269 | 372 | 169 | 7 | 39 | 409 | 1 | 357 | 3.23e-127 | 371 |
| Msa0878290 | AT3G15350.2 | 49.724 | 362 | 157 | 6 | 56 | 410 | 81 | 424 | 7.35e-127 | 373 |
| Msa0878290 | AT3G15350.1 | 49.724 | 362 | 157 | 6 | 56 | 410 | 81 | 424 | 7.35e-127 | 373 |
| Msa0878290 | AT1G03520.1 | 45.933 | 418 | 201 | 7 | 6 | 409 | 40 | 446 | 1.26e-126 | 373 |
| Msa0878290 | AT1G53100.1 | 46.283 | 417 | 197 | 9 | 4 | 409 | 22 | 422 | 7.21e-126 | 370 |
| Msa0878290 | AT4G03340.1 | 46.793 | 421 | 194 | 13 | 6 | 409 | 40 | 447 | 3.21e-125 | 370 |
| Msa0878290 | AT1G53100.2 | 46.683 | 407 | 190 | 9 | 4 | 399 | 22 | 412 | 1.11e-122 | 362 |
| Msa0878290 | AT2G37585.1 | 45.787 | 356 | 162 | 6 | 56 | 410 | 59 | 384 | 1.53e-110 | 330 |
| Msa0878290 | AT4G03340.2 | 43.705 | 421 | 184 | 14 | 6 | 409 | 40 | 424 | 1.67e-109 | 328 |
| Msa0878290 | AT1G71070.1 | 42.222 | 360 | 198 | 4 | 52 | 410 | 45 | 395 | 9.19e-100 | 303 |
| Msa0878290 | AT3G24040.1 | 39.665 | 358 | 206 | 4 | 53 | 409 | 66 | 414 | 1.36e-87 | 272 |
| Msa0878290 | AT3G03690.2 | 58.989 | 178 | 69 | 2 | 22 | 199 | 24 | 197 | 4.44e-68 | 215 |
Find 78 sgRNAs with CRISPR-Local
Find 165 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTTCTTAGGAGTTGTAAA+TGG | 0.207307 | 6_1:-19057752 | Msa0878290:CDS |
| GCCAAATATCTGATTTCTTT+TGG | 0.221928 | 6_1:+19056963 | None:intergenic |
| GCCAAAAGAAATCAGATATT+TGG | 0.232766 | 6_1:-19056964 | Msa0878290:CDS |
| ATGCTATGGCAATTCTTCTT+AGG | 0.239237 | 6_1:-19057764 | Msa0878290:CDS |
| ATTAAGTATGCAAAACTAAT+TGG | 0.250596 | 6_1:+19058020 | None:intergenic |
| TGATGTTGTTATGGTTAATT+TGG | 0.260767 | 6_1:+19058106 | None:intergenic |
| ACTCAAAGATTATAGGAAAA+TGG | 0.261335 | 6_1:-19055580 | Msa0878290:CDS |
| GATTGTGAAGAAATTAAGTT+TGG | 0.263708 | 6_1:+19058208 | None:intergenic |
| AATGTTGTGTTCATTGGATT+TGG | 0.283401 | 6_1:+19058071 | None:intergenic |
| ACATCTCTATGATCTTTCTT+TGG | 0.304538 | 6_1:+19057900 | None:intergenic |
| TCTTTGAGTGTTAGAGATCT+TGG | 0.314388 | 6_1:+19055594 | None:intergenic |
| CATTCACCATAGCAGTCATT+TGG | 0.315591 | 6_1:-19057502 | Msa0878290:CDS |
| AAATTATTATTTGATTCATA+TGG | 0.318689 | 6_1:-19057934 | Msa0878290:CDS |
| CTCTAACACTCAAAGATTAT+AGG | 0.319984 | 6_1:-19055587 | Msa0878290:CDS |
| AGAGATCTTGGATGTTGTTT+TGG | 0.322287 | 6_1:+19055606 | None:intergenic |
| AGTTTGAAAATTGAGAATTA+TGG | 0.324098 | 6_1:-19055402 | Msa0878290:CDS |
| CATGGAGTTGAAGATTTAGA+TGG | 0.338312 | 6_1:+19056812 | None:intergenic |
| ATGATCTACATTACATTACT+TGG | 0.367389 | 6_1:-19055638 | Msa0878290:CDS |
| TTCTTAAACTTTCTAGCAAA+TGG | 0.368091 | 6_1:+19055543 | None:intergenic |
| ACTGTTTGGAAATACCCTTC+TGG | 0.369138 | 6_1:+19055702 | None:intergenic |
| TTAGTTGAAGAGTGATATAA+TGG | 0.375101 | 6_1:+19058315 | None:intergenic |
| ATGTTGAATGTTGTGTTCAT+TGG | 0.379901 | 6_1:+19058065 | None:intergenic |
| TAGAATTGCATATAACTGTT+TGG | 0.386470 | 6_1:+19055688 | None:intergenic |
| TTTCTGAGTATTGTATTCTT+GGG | 0.387883 | 6_1:-19055779 | Msa0878290:CDS |
| ACCATAACAACATCAAAATA+TGG | 0.395466 | 6_1:-19058098 | Msa0878290:CDS |
| GTGGTAAAATGCTTTGATAA+AGG | 0.400155 | 6_1:+19058289 | None:intergenic |
| ATTCACCATAGCAGTCATTT+GGG | 0.401509 | 6_1:-19057501 | Msa0878290:CDS |
| TGAATCAAATAATAATTTCC+TGG | 0.403261 | 6_1:+19057939 | None:intergenic |
| TTGGTCAAGTAGGAAATGTT+TGG | 0.403827 | 6_1:-19057848 | Msa0878290:CDS |
| AATTTAGTCATATGATATAA+TGG | 0.406345 | 6_1:-19055244 | Msa0878290:three_prime_UTR |
| CTTCACAATCATATCTCAAA+TGG | 0.411173 | 6_1:-19058195 | Msa0878290:exon |
| TGGTAAAATGCTTTGATAAA+GGG | 0.412761 | 6_1:+19058290 | None:intergenic |
| TAGTGCATCTGATTATCCTT+TGG | 0.430100 | 6_1:-19057712 | Msa0878290:CDS |
| TACTTAATTTCAGGTTCAAA+AGG | 0.434285 | 6_1:-19058005 | Msa0878290:CDS |
| TGAATGAAATTCATATGCTT+TGG | 0.436558 | 6_1:+19057519 | None:intergenic |
| TATTTGATTCATATGGATCA+TGG | 0.436582 | 6_1:-19057927 | Msa0878290:CDS |
| GAAAATCAAAAGGTTGTTGA+AGG | 0.437111 | 6_1:-19057973 | Msa0878290:CDS |
| CTGAGTATTGTATTCTTGGG+TGG | 0.442957 | 6_1:-19055776 | Msa0878290:CDS |
| ACCATAGCAGTCATTTGGGT+TGG | 0.447311 | 6_1:-19057497 | Msa0878290:CDS |
| GAAGAAATTAAGTTTGGGAA+TGG | 0.455308 | 6_1:+19058214 | None:intergenic |
| TTAGGAGTTGTAAATGGGAT+TGG | 0.455353 | 6_1:-19057746 | Msa0878290:CDS |
| TATCCTTTGGTTACACAAGA+TGG | 0.455593 | 6_1:-19057699 | Msa0878290:intron |
| CAAAGAACAATGTTGAGGTT+AGG | 0.456716 | 6_1:+19058144 | None:intergenic |
| ACACAAAATTTGTGTAGTAT+AGG | 0.472913 | 6_1:+19055730 | None:intergenic |
| TCTTCTTAGGAGTTGTAAAT+GGG | 0.473649 | 6_1:-19057751 | Msa0878290:CDS |
| ATTGTGAAGAAATTAAGTTT+GGG | 0.473998 | 6_1:+19058209 | None:intergenic |
| TGAGTATTGTATTCTTGGGT+GGG | 0.475364 | 6_1:-19055775 | Msa0878290:CDS |
| TTGAAGGCTTTGTACCATCC+AGG | 0.476164 | 6_1:-19057957 | Msa0878290:CDS |
| AAGAAATTAAGTTTGGGAAT+GGG | 0.481976 | 6_1:+19058215 | None:intergenic |
| TGAGTAGAGTAATGAAGAAG+TGG | 0.486899 | 6_1:+19058270 | None:intergenic |
| TTCTACAACTCTTCATGCTA+TGG | 0.494826 | 6_1:-19057778 | Msa0878290:CDS |
| CAATGTTGAGGTTAGGATAG+AGG | 0.496090 | 6_1:+19058151 | None:intergenic |
| GTTGTGTTCATTGGATTTGG+AGG | 0.504260 | 6_1:+19058074 | None:intergenic |
| CTATGCTTTCCACCTTGTGA+TGG | 0.509851 | 6_1:+19055435 | None:intergenic |
| TCAAATAATAATTTCCTGGA+TGG | 0.514443 | 6_1:+19057943 | None:intergenic |
| TGTTGTTATGGTTAATTTGG+TGG | 0.523588 | 6_1:+19058109 | None:intergenic |
| GTTGTTATGGTTAATTTGGT+GGG | 0.523751 | 6_1:+19058110 | None:intergenic |
| AGAGTTGTAGAAAGCATAGT+TGG | 0.528565 | 6_1:+19057789 | None:intergenic |
| CAAAATTTGTGTAGTATAGG+AGG | 0.535652 | 6_1:+19055733 | None:intergenic |
| TGATCTACATTACATTACTT+GGG | 0.536389 | 6_1:-19055637 | Msa0878290:CDS |
| GAGATGCTATGAAAATCAAA+AGG | 0.539134 | 6_1:-19057983 | Msa0878290:CDS |
| AAAGGTAAATTACAAATGCA+TGG | 0.539974 | 6_1:+19056794 | None:intergenic |
| ATGCTTTGGAACTCCAGAAA+AGG | 0.544312 | 6_1:+19057533 | None:intergenic |
| TAGTATAGGAGGAGGATCCT+TGG | 0.550571 | 6_1:+19055744 | None:intergenic |
| AAAGAAATCAGATATTTGGC+AGG | 0.557557 | 6_1:-19056960 | Msa0878290:intron |
| TAAACTTTCTAGCAAATGGA+CGG | 0.567234 | 6_1:+19055547 | None:intergenic |
| TTGGAACTCCAGAAAAGGCA+TGG | 0.584028 | 6_1:+19057538 | None:intergenic |
| TAGTTGAAGAGTGATATAAT+GGG | 0.590353 | 6_1:+19058316 | None:intergenic |
| TCCAACCCAAATGACTGCTA+TGG | 0.598350 | 6_1:+19057496 | None:intergenic |
| AATTTGTGTAGTATAGGAGG+AGG | 0.604508 | 6_1:+19055736 | None:intergenic |
| ATTTACGCAAACAACAATGT+CGG | 0.619006 | 6_1:-19055311 | Msa0878290:CDS |
| AAGAACAAAGAACAATGTTG+AGG | 0.619282 | 6_1:+19058139 | None:intergenic |
| ATGTAGATCATTGTTAGCTG+TGG | 0.654226 | 6_1:+19055650 | None:intergenic |
| TTGGGTGGGAAAATTTACCA+AGG | 0.657816 | 6_1:-19055761 | Msa0878290:CDS |
| ATACCATCTTGTGTAACCAA+AGG | 0.660551 | 6_1:+19057696 | None:intergenic |
| AAAATCATTGACACATGGAG+AGG | 0.677038 | 6_1:-19058400 | Msa0878290:five_prime_UTR |
| TGGTGTTCATCACCATCACA+AGG | 0.691054 | 6_1:-19055447 | Msa0878290:CDS |
| TGTTCATCACCATCACAAGG+TGG | 0.742385 | 6_1:-19055444 | Msa0878290:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTATTATTTGATTCATA+TGG | - | chr6_1:19055705-19055724 | Msa0878290:CDS | 10.0% |
| !! | AAATGATTCAAAAAATAAAA+TGG | + | chr6_1:19055997-19056016 | None:intergenic | 10.0% |
| !! | TTATAAAATATTTAGTCTAT+TGG | - | chr6_1:19056330-19056349 | Msa0878290:intron | 10.0% |
| !!! | ATTAATAAACTTTTAGTATA+GGG | + | chr6_1:19056505-19056524 | None:intergenic | 10.0% |
| !!! | AATTAATAAACTTTTAGTAT+AGG | + | chr6_1:19056506-19056525 | None:intergenic | 10.0% |
| !! | AAGTATATAATCATAAATTA+TGG | + | chr6_1:19057017-19057036 | None:intergenic | 10.0% |
| !!! | AGTAATTTTGTTACATATAA+AGG | - | chr6_1:19055826-19055845 | Msa0878290:intron | 15.0% |
| !!! | TTAATAAACTTTTAGTATAG+GGG | + | chr6_1:19056504-19056523 | None:intergenic | 15.0% |
| !!! | AATTAGAATTTTGAGTAAAA+TGG | + | chr6_1:19056591-19056610 | None:intergenic | 15.0% |
| !! | GAAAAAAATTAAAGTTGTAT+TGG | + | chr6_1:19057109-19057128 | None:intergenic | 15.0% |
| !!! | TTATTTCTATTCAAAAATCT+AGG | - | chr6_1:19057808-19057827 | Msa0878290:CDS | 15.0% |
| !! | AATTTAGTCATATGATATAA+TGG | - | chr6_1:19058395-19058414 | Msa0878290:five_prime_UTR | 15.0% |
| !!! | GATTCTTTTCTTTTATAACA+AGG | + | chr6_1:19055265-19055284 | None:intergenic | 20.0% |
| !! | ATTGTGAAGAAATTAAGTTT+GGG | + | chr6_1:19055433-19055452 | None:intergenic | 20.0% |
| !!! | ACTAATTGGATATTTTTTGT+TGG | + | chr6_1:19055608-19055627 | None:intergenic | 20.0% |
| !! | ATTAAGTATGCAAAACTAAT+TGG | + | chr6_1:19055622-19055641 | None:intergenic | 20.0% |
| !! | TGAATCAAATAATAATTTCC+TGG | + | chr6_1:19055703-19055722 | None:intergenic | 20.0% |
| !! | TATATAGTTTAAAAGCTGTT+GGG | + | chr6_1:19056724-19056743 | None:intergenic | 20.0% |
| !! | ATACTATAGAACAAATCTAA+AGG | + | chr6_1:19056774-19056793 | None:intergenic | 20.0% |
| !!! | AAGTGACATTCATTTTAAAA+CGG | + | chr6_1:19057043-19057062 | None:intergenic | 20.0% |
| !! | AAAATTATTAAGGGTAAAGT+TGG | + | chr6_1:19057134-19057153 | None:intergenic | 20.0% |
| !!! | GTTTTTTTCTTATAAAGTAG+AGG | - | chr6_1:19057187-19057206 | Msa0878290:intron | 20.0% |
| !!! | TAAGTTCTCTAAAATAGTTT+AGG | - | chr6_1:19057372-19057391 | Msa0878290:intron | 20.0% |
| !! | ACACAAATTTGACATTAATT+TGG | + | chr6_1:19057730-19057749 | None:intergenic | 20.0% |
| !! | ATAACAAGTTAATGAATGAT+TGG | + | chr6_1:19057792-19057811 | None:intergenic | 20.0% |
| !! | AGTTTGAAAATTGAGAATTA+TGG | - | chr6_1:19058237-19058256 | Msa0878290:five_prime_UTR | 20.0% |
| !! | TGTGTGGTTTACTTAATTTT+TGG | + | chr6_1:19055287-19055306 | None:intergenic | 25.0% |
| !!! | ACTAAATTTTTTGAAGTGTG+TGG | + | chr6_1:19055303-19055322 | None:intergenic | 25.0% |
| ! | TAGTTGAAGAGTGATATAAT+GGG | + | chr6_1:19055326-19055345 | None:intergenic | 25.0% |
| ! | TTAGTTGAAGAGTGATATAA+TGG | + | chr6_1:19055327-19055346 | None:intergenic | 25.0% |
| ! | TGGTAAAATGCTTTGATAAA+GGG | + | chr6_1:19055352-19055371 | None:intergenic | 25.0% |
| ! | AAGAAATTAAGTTTGGGAAT+GGG | + | chr6_1:19055427-19055446 | None:intergenic | 25.0% |
| ! | GATTGTGAAGAAATTAAGTT+TGG | + | chr6_1:19055434-19055453 | None:intergenic | 25.0% |
| ! | TGATGTTGTTATGGTTAATT+TGG | + | chr6_1:19055536-19055555 | None:intergenic | 25.0% |
| ! | ACCATAACAACATCAAAATA+TGG | - | chr6_1:19055541-19055560 | Msa0878290:CDS | 25.0% |
| !!! | ACCATATTTTGATGTTGTTA+TGG | + | chr6_1:19055545-19055564 | None:intergenic | 25.0% |
| !!! | TGGATATTTTTTGTTGGTAT+TGG | + | chr6_1:19055602-19055621 | None:intergenic | 25.0% |
| !! | AGTTTTGCATACTTAATTTC+AGG | - | chr6_1:19055625-19055644 | Msa0878290:CDS | 25.0% |
| !!! | TACTTAATTTCAGGTTCAAA+AGG | - | chr6_1:19055634-19055653 | Msa0878290:CDS | 25.0% |
| ! | TCAAATAATAATTTCCTGGA+TGG | + | chr6_1:19055699-19055718 | None:intergenic | 25.0% |
| ! | TATTTGATTCATATGGATCA+TGG | - | chr6_1:19055712-19055731 | Msa0878290:CDS | 25.0% |
| ! | TGAATGAAATTCATATGCTT+TGG | + | chr6_1:19056123-19056142 | None:intergenic | 25.0% |
| ! | CCAATTTAGTCACTAAAATT+TGG | + | chr6_1:19056546-19056565 | None:intergenic | 25.0% |
| !!! | CCAAATTTTAGTGACTAAAT+TGG | - | chr6_1:19056543-19056562 | Msa0878290:intron | 25.0% |
| !! | ATATTTTCCAGCAATAAAAG+AGG | - | chr6_1:19056620-19056639 | Msa0878290:intron | 25.0% |
| !! | TATTTTCCAGCAATAAAAGA+GGG | - | chr6_1:19056621-19056640 | Msa0878290:intron | 25.0% |
| ! | GTATATAGTTTAAAAGCTGT+TGG | + | chr6_1:19056725-19056744 | None:intergenic | 25.0% |
| !! | ACAGCTTTTAAACTATATAC+AGG | - | chr6_1:19056725-19056744 | Msa0878290:intron | 25.0% |
| ! | GAACAAATCTAAAGGATTAA+AGG | + | chr6_1:19056766-19056785 | None:intergenic | 25.0% |
| ! | AAAGGTAAATTACAAATGCA+TGG | + | chr6_1:19056848-19056867 | None:intergenic | 25.0% |
| ! | AATAAAATACTTCACGTGAA+AGG | + | chr6_1:19056866-19056885 | None:intergenic | 25.0% |
| ! | GTGAGAGAGAAAATTATTAA+GGG | + | chr6_1:19057143-19057162 | None:intergenic | 25.0% |
| ! | TGTGAGAGAGAAAATTATTA+AGG | + | chr6_1:19057144-19057163 | None:intergenic | 25.0% |
| ! | AATGATCAATACAACTACAA+GGG | + | chr6_1:19057627-19057646 | None:intergenic | 25.0% |
| ! | TAATGATCAATACAACTACA+AGG | + | chr6_1:19057628-19057647 | None:intergenic | 25.0% |
| ! | GTTAGTATTAACCATATAGT+TGG | - | chr6_1:19057678-19057697 | Msa0878290:intron | 25.0% |
| !!! | TTTTCTGAGTATTGTATTCT+TGG | - | chr6_1:19057859-19057878 | Msa0878290:CDS | 25.0% |
| !! | TTTCTGAGTATTGTATTCTT+GGG | - | chr6_1:19057860-19057879 | Msa0878290:CDS | 25.0% |
| ! | ACACAAAATTTGTGTAGTAT+AGG | + | chr6_1:19057912-19057931 | None:intergenic | 25.0% |
| ! | TAGAATTGCATATAACTGTT+TGG | + | chr6_1:19057954-19057973 | None:intergenic | 25.0% |
| ! | ATGATCTACATTACATTACT+TGG | - | chr6_1:19058001-19058020 | Msa0878290:CDS | 25.0% |
| ! | TGATCTACATTACATTACTT+GGG | - | chr6_1:19058002-19058021 | Msa0878290:CDS | 25.0% |
| ! | ACTCAAAGATTATAGGAAAA+TGG | - | chr6_1:19058059-19058078 | Msa0878290:CDS | 25.0% |
| !! | TTCTTAAACTTTCTAGCAAA+TGG | + | chr6_1:19058099-19058118 | None:intergenic | 25.0% |
| !!! | CATATTTTTCATCTTTTTCG+AGG | + | chr6_1:19058283-19058302 | None:intergenic | 25.0% |
| TCAGAAAAATCATTGACACA+TGG | - | chr6_1:19055234-19055253 | Msa0878290:three_prime_UTR | 30.0% | |
| GTGGTAAAATGCTTTGATAA+AGG | + | chr6_1:19055353-19055372 | None:intergenic | 30.0% | |
| GAAGAAATTAAGTTTGGGAA+TGG | + | chr6_1:19055428-19055447 | None:intergenic | 30.0% | |
| CTTCACAATCATATCTCAAA+TGG | - | chr6_1:19055444-19055463 | Msa0878290:CDS | 30.0% | |
| AAGAACAAAGAACAATGTTG+AGG | + | chr6_1:19055503-19055522 | None:intergenic | 30.0% | |
| ! | GTTGTTATGGTTAATTTGGT+GGG | + | chr6_1:19055532-19055551 | None:intergenic | 30.0% |
| ! | TGTTGTTATGGTTAATTTGG+TGG | + | chr6_1:19055533-19055552 | None:intergenic | 30.0% |
| AATGTTGTGTTCATTGGATT+TGG | + | chr6_1:19055571-19055590 | None:intergenic | 30.0% | |
| ATGTTGAATGTTGTGTTCAT+TGG | + | chr6_1:19055577-19055596 | None:intergenic | 30.0% | |
| GAGATGCTATGAAAATCAAA+AGG | - | chr6_1:19055656-19055675 | Msa0878290:CDS | 30.0% | |
| GAAAATCAAAAGGTTGTTGA+AGG | - | chr6_1:19055666-19055685 | Msa0878290:CDS | 30.0% | |
| ACATCTCTATGATCTTTCTT+TGG | + | chr6_1:19055742-19055761 | None:intergenic | 30.0% | |
| TTCTTCTTAGGAGTTGTAAA+TGG | - | chr6_1:19055887-19055906 | Msa0878290:intron | 30.0% | |
| TCTTCTTAGGAGTTGTAAAT+GGG | - | chr6_1:19055888-19055907 | Msa0878290:intron | 30.0% | |
| ATGGCATGATCCAATATTAA+AGG | + | chr6_1:19055978-19055997 | None:intergenic | 30.0% | |
| !! | AGTCTCTAAAATTACCTCAA+AGG | - | chr6_1:19056367-19056386 | Msa0878290:intron | 30.0% |
| ! | AGTGCTGGATCTATAAAAAT+TGG | + | chr6_1:19056650-19056669 | None:intergenic | 30.0% |
| GCCAAAAGAAATCAGATATT+TGG | - | chr6_1:19056675-19056694 | Msa0878290:intron | 30.0% | |
| ! | GCCAAATATCTGATTTCTTT+TGG | + | chr6_1:19056679-19056698 | None:intergenic | 30.0% |
| AAAGAAATCAGATATTTGGC+AGG | - | chr6_1:19056679-19056698 | Msa0878290:intron | 30.0% | |
| AAAATAAATGATACCCTCGA+GGG | + | chr6_1:19056970-19056989 | None:intergenic | 30.0% | |
| !!! | AGGGTATCATTTATTTTGGT+CGG | - | chr6_1:19056973-19056992 | Msa0878290:CDS | 30.0% |
| TTTCTTAATCTGTGTGCAAT+TGG | - | chr6_1:19057252-19057271 | Msa0878290:intron | 30.0% | |
| GTATTAACCATATAGTTGGA+TGG | - | chr6_1:19057682-19057701 | Msa0878290:intron | 30.0% | |
| GAAATTACCATCCAACTATA+TGG | + | chr6_1:19057692-19057711 | None:intergenic | 30.0% | |
| CAAAATTTGTGTAGTATAGG+AGG | + | chr6_1:19057909-19057928 | None:intergenic | 30.0% | |
| CTCTAACACTCAAAGATTAT+AGG | - | chr6_1:19058052-19058071 | Msa0878290:CDS | 30.0% | |
| ! | TAAACTTTCTAGCAAATGGA+CGG | + | chr6_1:19058095-19058114 | None:intergenic | 30.0% |
| ! | AAATTGATAGAGAGCTTTTG+AGG | - | chr6_1:19058139-19058158 | Msa0878290:CDS | 30.0% |
| ! | AATCGTGGACAATTTTCTTT+TGG | - | chr6_1:19058165-19058184 | Msa0878290:CDS | 30.0% |
| ATTTACGCAAACAACAATGT+CGG | - | chr6_1:19058328-19058347 | Msa0878290:five_prime_UTR | 30.0% | |
| AAAATCATTGACACATGGAG+AGG | - | chr6_1:19055239-19055258 | Msa0878290:three_prime_UTR | 35.0% | |
| TGAGTAGAGTAATGAAGAAG+TGG | + | chr6_1:19055372-19055391 | None:intergenic | 35.0% | |
| CAAAGAACAATGTTGAGGTT+AGG | + | chr6_1:19055498-19055517 | None:intergenic | 35.0% | |
| ! | GTGACTAATGAACCTGTTTT+TGG | - | chr6_1:19055772-19055791 | Msa0878290:CDS | 35.0% |
| TTTCCTACTTGACCAAAAAC+AGG | + | chr6_1:19055787-19055806 | None:intergenic | 35.0% | |
| TTGGTCAAGTAGGAAATGTT+TGG | - | chr6_1:19055791-19055810 | Msa0878290:CDS | 35.0% | |
| ! | AGAGTTGTAGAAAGCATAGT+TGG | + | chr6_1:19055853-19055872 | None:intergenic | 35.0% |
| TTCTACAACTCTTCATGCTA+TGG | - | chr6_1:19055861-19055880 | Msa0878290:intron | 35.0% | |
| ATGCTATGGCAATTCTTCTT+AGG | - | chr6_1:19055875-19055894 | Msa0878290:intron | 35.0% | |
| TTAGGAGTTGTAAATGGGAT+TGG | - | chr6_1:19055893-19055912 | Msa0878290:intron | 35.0% | |
| TAGTGCATCTGATTATCCTT+TGG | - | chr6_1:19055927-19055946 | Msa0878290:intron | 35.0% | |
| TATCCTTTGGTTACACAAGA+TGG | - | chr6_1:19055940-19055959 | Msa0878290:intron | 35.0% | |
| ATACCATCTTGTGTAACCAA+AGG | + | chr6_1:19055946-19055965 | None:intergenic | 35.0% | |
| TTTGGTTACACAAGATGGTA+TGG | - | chr6_1:19055945-19055964 | Msa0878290:intron | 35.0% | |
| CATGGATCAGATCTGAAAAT+TGG | + | chr6_1:19056086-19056105 | None:intergenic | 35.0% | |
| ATTCACCATAGCAGTCATTT+GGG | - | chr6_1:19056138-19056157 | Msa0878290:intron | 35.0% | |
| TCATCACATTAGTTCCTTTG+AGG | + | chr6_1:19056384-19056403 | None:intergenic | 35.0% | |
| !! | TTCTTTTGGCTATAAAGTGC+TGG | + | chr6_1:19056665-19056684 | None:intergenic | 35.0% |
| CATGGAGTTGAAGATTTAGA+TGG | + | chr6_1:19056830-19056849 | None:intergenic | 35.0% | |
| TGACTTATCTATAGCATGTG+AGG | - | chr6_1:19056892-19056911 | Msa0878290:intron | 35.0% | |
| CAAAATAAATGATACCCTCG+AGG | + | chr6_1:19056971-19056990 | None:intergenic | 35.0% | |
| !!! | CTCGAGGGTATCATTTATTT+TGG | - | chr6_1:19056969-19056988 | Msa0878290:CDS | 35.0% |
| !!! | GACACTCATTTTGAAACGAT+GGG | - | chr6_1:19057282-19057301 | Msa0878290:intron | 35.0% |
| TCTATTTGCATAAGTATCCG+TGG | - | chr6_1:19057338-19057357 | Msa0878290:intron | 35.0% | |
| TCAAAAATCTAGGTTCAGCT+TGG | - | chr6_1:19057818-19057837 | Msa0878290:CDS | 35.0% | |
| ! | TGAGTATTGTATTCTTGGGT+GGG | - | chr6_1:19057864-19057883 | Msa0878290:CDS | 35.0% |
| AATTTGTGTAGTATAGGAGG+AGG | + | chr6_1:19057906-19057925 | None:intergenic | 35.0% | |
| ! | AATTTTGTGTCATCTCCAGA+AGG | - | chr6_1:19057922-19057941 | Msa0878290:CDS | 35.0% |
| ! | ATTTTGTGTCATCTCCAGAA+GGG | - | chr6_1:19057923-19057942 | Msa0878290:CDS | 35.0% |
| ATGTAGATCATTGTTAGCTG+TGG | + | chr6_1:19057992-19058011 | None:intergenic | 35.0% | |
| !! | AGAGATCTTGGATGTTGTTT+TGG | + | chr6_1:19058036-19058055 | None:intergenic | 35.0% |
| TCTTTGAGTGTTAGAGATCT+TGG | + | chr6_1:19058048-19058067 | None:intergenic | 35.0% | |
| !! | GACAATTTTCTTTTGGAGGA+TGG | - | chr6_1:19058172-19058191 | Msa0878290:CDS | 35.0% |
| CAATGTTGAGGTTAGGATAG+AGG | + | chr6_1:19055491-19055510 | None:intergenic | 40.0% | |
| GTTGTGTTCATTGGATTTGG+AGG | + | chr6_1:19055568-19055587 | None:intergenic | 40.0% | |
| !!! | GAACCTGTTTTTGGTCAAGT+AGG | - | chr6_1:19055781-19055800 | Msa0878290:CDS | 40.0% |
| TGGTGAGTGGCCTTTAATAT+TGG | - | chr6_1:19055965-19055984 | Msa0878290:intron | 40.0% | |
| !! | ATGCTTTGGAACTCCAGAAA+AGG | + | chr6_1:19056109-19056128 | None:intergenic | 40.0% |
| CATTCACCATAGCAGTCATT+TGG | - | chr6_1:19056137-19056156 | Msa0878290:intron | 40.0% | |
| TTTGGCAGGTAACTAAGCAA+AGG | - | chr6_1:19056693-19056712 | Msa0878290:intron | 40.0% | |
| ACTATAACGACCACTCTGTT+TGG | + | chr6_1:19056926-19056945 | None:intergenic | 40.0% | |
| !!! | CGACACTCATTTTGAAACGA+TGG | - | chr6_1:19057281-19057300 | Msa0878290:intron | 40.0% |
| TTCGTGAGTGCGTTCAAATA+TGG | - | chr6_1:19057599-19057618 | Msa0878290:intron | 40.0% | |
| ! | CTGAGTATTGTATTCTTGGG+TGG | - | chr6_1:19057863-19057882 | Msa0878290:CDS | 40.0% |
| TTGGGTGGGAAAATTTACCA+AGG | - | chr6_1:19057878-19057897 | Msa0878290:CDS | 40.0% | |
| ACTGTTTGGAAATACCCTTC+TGG | + | chr6_1:19057940-19057959 | None:intergenic | 40.0% | |
| !!! | GATCTTGGATGTTGTTTTGG+AGG | + | chr6_1:19058033-19058052 | None:intergenic | 40.0% |
| ! | CGTGGACAATTTTCTTTTGG+AGG | - | chr6_1:19058168-19058187 | Msa0878290:CDS | 40.0% |
| !!! | ATCTTTTTCGAGGCTAGACT+TGG | + | chr6_1:19058273-19058292 | None:intergenic | 40.0% |
| ! | TTGAAGGCTTTGTACCATCC+AGG | - | chr6_1:19055682-19055701 | Msa0878290:CDS | 45.0% |
| ACACAAGATGGTATGGTGAG+TGG | - | chr6_1:19055952-19055971 | Msa0878290:intron | 45.0% | |
| ! | GATCTGATCCATGCCTTTTC+TGG | - | chr6_1:19056093-19056112 | Msa0878290:intron | 45.0% |
| TTGGAACTCCAGAAAAGGCA+TGG | + | chr6_1:19056104-19056123 | None:intergenic | 45.0% | |
| ACCATAGCAGTCATTTGGGT+TGG | - | chr6_1:19056142-19056161 | Msa0878290:intron | 45.0% | |
| TCCAACCCAAATGACTGCTA+TGG | + | chr6_1:19056146-19056165 | None:intergenic | 45.0% | |
| ! | AGGGGCATAGTACAAGTGAT+TGG | + | chr6_1:19056486-19056505 | None:intergenic | 45.0% |
| ! | TGGCTTCCCTCTTTTATTGC+TGG | + | chr6_1:19056630-19056649 | None:intergenic | 45.0% |
| TTCCAATATTGCATCCCTCG+AGG | - | chr6_1:19056953-19056972 | Msa0878290:intron | 45.0% | |
| TCCAATATTGCATCCCTCGA+GGG | - | chr6_1:19056954-19056973 | Msa0878290:intron | 45.0% | |
| AACTTACGCAGACAATGCCA+CGG | + | chr6_1:19057358-19057377 | None:intergenic | 45.0% | |
| TAGTATAGGAGGAGGATCCT+TGG | + | chr6_1:19057898-19057917 | None:intergenic | 45.0% | |
| !! | GAGCTTTTGAGGAGAAATCG+TGG | - | chr6_1:19058150-19058169 | Msa0878290:CDS | 45.0% |
| TGGTGTTCATCACCATCACA+AGG | - | chr6_1:19058192-19058211 | Msa0878290:exon | 45.0% | |
| TGTTCATCACCATCACAAGG+TGG | - | chr6_1:19058195-19058214 | Msa0878290:exon | 45.0% | |
| CTATGCTTTCCACCTTGTGA+TGG | + | chr6_1:19058207-19058226 | None:intergenic | 45.0% | |
| !!! | AATTAAATTCTATAATTTTA+GGG | + | chr6_1:19056277-19056296 | None:intergenic | 5.0% |
| !!! | TAATTAAATTCTATAATTTT+AGG | + | chr6_1:19056278-19056297 | None:intergenic | 5.0% |
| !! | GGCTCTGAATCCAAACAGAG+TGG | - | chr6_1:19056913-19056932 | Msa0878290:intron | 50.0% |
| ACCCTCGAGGGATGCAATAT+TGG | + | chr6_1:19056958-19056977 | None:intergenic | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 19055233 | 19058428 | 19055233 | ID=Msa0878290;Name=Msa0878290 |
| chr6_1 | mRNA | 19055233 | 19058428 | 19055233 | ID=Msa0878290-mRNA-1;Parent=Msa0878290;Name=Msa0878290-mRNA-1;_AED=0.13;_eAED=0.13;_QI=230|0.5|0.6|1|1|1|5|75|410 |
| chr6_1 | exon | 19055233 | 19055831 | 19055233 | ID=Msa0878290-mRNA-1:exon:5136;Parent=Msa0878290-mRNA-1 |
| chr6_1 | exon | 19056807 | 19056870 | 19056807 | ID=Msa0878290-mRNA-1:exon:5135;Parent=Msa0878290-mRNA-1 |
| chr6_1 | exon | 19056961 | 19057030 | 19056961 | ID=Msa0878290-mRNA-1:exon:5134;Parent=Msa0878290-mRNA-1 |
| chr6_1 | exon | 19057492 | 19057567 | 19057492 | ID=Msa0878290-mRNA-1:exon:5133;Parent=Msa0878290-mRNA-1 |
| chr6_1 | exon | 19057700 | 19058428 | 19057700 | ID=Msa0878290-mRNA-1:exon:5132;Parent=Msa0878290-mRNA-1 |
| chr6_1 | five_prime_UTR | 19058199 | 19058428 | 19058199 | ID=Msa0878290-mRNA-1:five_prime_utr;Parent=Msa0878290-mRNA-1 |
| chr6_1 | CDS | 19057700 | 19058198 | 19057700 | ID=Msa0878290-mRNA-1:cds;Parent=Msa0878290-mRNA-1 |
| chr6_1 | CDS | 19057492 | 19057567 | 19057492 | ID=Msa0878290-mRNA-1:cds;Parent=Msa0878290-mRNA-1 |
| chr6_1 | CDS | 19056961 | 19057030 | 19056961 | ID=Msa0878290-mRNA-1:cds;Parent=Msa0878290-mRNA-1 |
| chr6_1 | CDS | 19056807 | 19056870 | 19056807 | ID=Msa0878290-mRNA-1:cds;Parent=Msa0878290-mRNA-1 |
| chr6_1 | CDS | 19055308 | 19055831 | 19055308 | ID=Msa0878290-mRNA-1:cds;Parent=Msa0878290-mRNA-1 |
| chr6_1 | three_prime_UTR | 19055233 | 19055307 | 19055233 | ID=Msa0878290-mRNA-1:three_prime_utr;Parent=Msa0878290-mRNA-1 |
| Gene Sequence |
| Protein sequence |
