AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0762210


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0762210 MtrunA17_Chr5g0412381 92.876 379 24 2 1 379 1 376 0.0 634
Msa0762210 MtrunA17_Chr5g0412381 97.337 338 8 1 626 963 607 943 0.0 626
Msa0762210 MtrunA17_Chr5g0412381 99.310 145 1 0 378 522 462 606 3.22e-94 319
Msa0762210 MtrunA17_Chr3g0133061 49.035 259 98 4 626 874 769 1003 2.19e-60 224
Msa0762210 MtrunA17_Chr3g0133061 65.517 145 48 1 380 522 624 768 2.52e-54 206
Msa0762210 MtrunA17_Chr3g0133061 37.589 141 65 4 19 159 24 141 1.31e-17 88.6
Msa0762210 MtrunA17_Chr5g0427301 67.586 145 45 1 380 522 582 726 2.04e-56 212
Msa0762210 MtrunA17_Chr5g0427301 43.411 258 108 8 626 870 727 959 1.27e-48 187
Msa0762210 MtrunA17_Chr5g0427301 41.104 163 70 6 1 139 1 161 8.46e-24 108
Msa0762210 MtrunA17_Chr2g0313171 43.145 248 132 4 626 864 650 897 4.56e-53 201
Msa0762210 MtrunA17_Chr2g0313171 52.055 146 67 1 380 522 504 649 5.92e-39 157
Msa0762210 MtrunA17_Chr2g0313171 61.905 42 16 0 85 126 85 126 7.59e-12 69.7
Msa0762210 MtrunA17_Chr1g0150541 56.667 150 64 1 626 775 367 515 1.18e-46 180
Msa0762210 MtrunA17_Chr1g0150541 39.823 226 97 7 382 596 223 420 3.66e-38 154
Msa0762210 MtrunA17_Chr2g0312901 42.424 132 72 3 626 756 210 338 1.34e-21 100
Msa0762210 MtrunA17_Chr2g0312901 30.328 122 80 2 403 520 87 207 1.18e-12 72.0
Msa0762210 MtrunA17_Chr4g0074041 42.975 121 66 2 626 745 277 395 3.29e-20 96.7
Msa0762210 MtrunA17_Chr4g0074041 34.932 146 89 5 381 522 133 276 2.67e-17 87.4
Msa0762210 MtrunA17_Chr6g0458421 37.500 160 81 5 626 783 209 351 5.32e-19 92.0
Msa0762210 MtrunA17_Chr6g0458421 31.507 146 95 4 376 520 65 206 8.53e-15 78.6
Msa0762210 MtrunA17_Chr6g0458431 36.875 160 82 5 626 783 274 416 5.58e-18 89.0
Msa0762210 MtrunA17_Chr6g0458431 30.137 146 97 4 376 520 130 271 7.23e-15 79.0
Msa0762210 MtrunA17_Chr5g0411271 34.969 163 85 5 626 783 327 473 2.68e-17 87.0
Msa0762210 MtrunA17_Chr5g0411271 29.496 139 88 4 376 513 190 319 1.73e-12 71.6
Msa0762210 MtrunA17_Chr2g0322211 40.000 125 69 3 626 747 742 863 4.52e-17 86.7
Msa0762210 MtrunA17_Chr6g0458441 42.276 123 66 4 626 746 307 426 5.07e-17 85.9
Msa0762210 MtrunA17_Chr6g0458441 32.192 146 94 4 376 520 163 304 2.68e-15 80.5
Msa0762210 MtrunA17_Chr4g0062561 41.463 123 67 3 624 745 422 540 4.96e-16 83.2
Msa0762210 MtrunA17_Chr4g0062561 33.835 133 82 3 618 750 731 857 1.35e-12 72.0
Msa0762210 MtrunA17_Chr4g0062491 32.450 151 88 4 626 765 166 313 7.39e-14 73.9
Msa0762210 MtrunA17_Chr1g0149991 29.787 141 74 4 626 745 388 524 3.17e-13 73.6
Msa0762210 MtrunA17_Chr7g0267641 35.075 134 78 5 626 753 816 946 1.96e-12 71.6
Msa0762210 MtrunA17_Chr8g0366721 32.117 137 86 3 626 757 376 510 5.15e-12 69.7
Msa0762210 MtrunA17_Chr4g0064671 28.966 145 74 4 626 745 105 245 9.18e-12 66.6
Msa0762210 MtrunA17_Chr8g0356421 38.554 83 50 1 56 138 147 228 1.20e-11 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0762210 AT5G65450.1 70.345 145 43 0 378 522 367 511 3.68e-60 219
Msa0762210 AT5G65450.1 46.400 250 91 6 626 874 512 719 5.96e-51 192
Msa0762210 AT5G65450.1 32.707 266 125 11 17 281 1 213 3.04e-22 103
Msa0762210 AT5G65450.2 70.345 145 43 0 378 522 386 530 5.75e-60 219
Msa0762210 AT5G65450.2 46.400 250 91 6 626 874 531 738 7.50e-51 192
Msa0762210 AT5G65450.2 32.734 278 133 11 5 281 8 232 2.42e-24 110
Msa0762210 AT4G24560.1 60.256 156 58 2 370 521 571 726 1.06e-47 185
Msa0762210 AT4G24560.1 40.873 252 134 3 626 877 728 964 1.98e-47 184
Msa0762210 AT4G24560.1 45.283 106 42 2 22 127 25 114 4.59e-20 97.1
Msa0762210 AT1G17110.3 42.739 241 93 5 626 864 624 821 1.92e-47 184
Msa0762210 AT1G17110.3 50.331 151 72 1 375 522 473 623 8.54e-39 156
Msa0762210 AT1G17110.3 58.824 51 21 0 76 126 119 169 3.34e-14 77.8
Msa0762210 AT1G17110.1 42.739 241 93 5 626 864 624 821 1.92e-47 184
Msa0762210 AT1G17110.1 50.331 151 72 1 375 522 473 623 8.54e-39 156
Msa0762210 AT1G17110.1 58.824 51 21 0 76 126 119 169 3.34e-14 77.8
Msa0762210 AT1G17110.2 42.739 241 93 5 626 864 628 825 1.92e-47 184
Msa0762210 AT1G17110.2 50.331 151 72 1 375 522 477 627 7.84e-39 157
Msa0762210 AT1G17110.2 58.824 51 21 0 76 126 119 169 3.26e-14 77.8
Msa0762210 AT2G24640.2 62.400 125 47 0 626 750 190 314 4.38e-46 174
Msa0762210 AT2G24640.2 50.331 151 72 1 375 522 39 189 2.51e-42 162
Msa0762210 AT2G24640.1 62.400 125 47 0 626 750 360 484 5.50e-45 174
Msa0762210 AT2G24640.1 50.331 151 72 1 375 522 209 359 2.12e-41 162
Msa0762210 AT4G31670.1 61.667 120 46 0 626 745 354 473 1.94e-42 165
Msa0762210 AT4G31670.1 48.344 151 75 1 375 522 203 353 8.24e-41 160
Msa0762210 AT5G57990.1 39.860 143 80 2 626 764 292 432 8.62e-24 108
Msa0762210 AT5G57990.1 32.192 146 93 5 381 522 148 291 5.70e-15 80.1
Msa0762210 AT3G14400.1 41.259 143 75 4 626 761 213 353 1.20e-21 101
Msa0762210 AT3G14400.1 30.872 149 98 3 376 520 66 213 6.77e-13 73.2
Msa0762210 AT5G46740.2 40.323 124 68 4 626 745 138 259 9.94e-16 82.0
Msa0762210 AT5G46740.1 40.323 124 68 4 626 745 347 468 1.91e-15 81.6
Msa0762210 AT2G32780.1 37.121 132 62 4 632 745 954 1082 4.18e-15 80.9
Msa0762210 AT1G04860.1 39.062 128 61 4 632 745 832 956 7.72e-15 79.7
Msa0762210 AT4G10590.4 37.903 124 70 4 626 745 773 893 4.74e-13 73.9
Msa0762210 AT4G10590.3 37.903 124 70 4 626 745 773 893 4.74e-13 73.9
Msa0762210 AT4G10590.1 37.903 124 70 4 626 745 773 893 4.74e-13 73.9
Msa0762210 AT4G10590.2 37.903 124 70 4 626 745 773 893 4.74e-13 73.9
Msa0762210 AT4G17895.1 34.586 133 81 3 626 754 354 484 5.66e-12 70.5

Find 218 sgRNAs with CRISPR-Local

Find 614 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTTTATTTGTTATTGGTTT+TGG 0.121892 5_2:-20033699 Msa0762210:CDS
ATTTACAGCACCTGAAATTT+TGG 0.137740 5_2:-20029971 Msa0762210:CDS
AATACGATTGTAAGAATATT+TGG 0.152865 5_2:+20027225 None:intergenic
TTATCTTTATCCAAAATTTC+AGG 0.208390 5_2:+20029961 None:intergenic
CTTACTGAACCCAGGGGTTT+TGG 0.224633 5_2:+20025955 None:intergenic
CAGTATTGTCAACTTCTTCT+TGG 0.226243 5_2:+20027254 None:intergenic
CACTTAGAAGTGTCTGTTAT+TGG 0.226390 5_2:+20031918 None:intergenic
CTCTTGATGCGGGGCGCAAC+TGG 0.242808 5_2:+20029619 None:intergenic
GTTATCCTATAAGGGCAAAA+TGG 0.243437 5_2:+20033838 None:intergenic
TAGTTGAATCTCCATTCTTC+TGG 0.247696 5_2:+20025748 None:intergenic
ACTCTCATTGGATACACTTT+TGG 0.259420 5_2:-20030250 Msa0762210:CDS
AGCAAAAGGGTTATCCTATA+AGG 0.274951 5_2:+20033829 None:intergenic
AATCGTATTAAAACGATTTC+AGG 0.276311 5_2:-20027211 Msa0762210:intron
ACAAGATACTACTGCTTCTA+TGG 0.281969 5_2:-20033609 Msa0762210:CDS
CTTTATCTTCCGAGTCTTGC+TGG 0.282680 5_2:+20025476 None:intergenic
AACTCAGATTTGGCCATAAA+AGG 0.294284 5_2:+20029476 None:intergenic
GCGGCCCTTGTGCGCCGCTA+TGG 0.299287 5_2:+20029544 None:intergenic
CACAAGGGCCGCTCTGGAAG+AGG 0.313592 5_2:-20029533 Msa0762210:CDS
TATGTGTCGGATTTAGCTTT+TGG 0.327935 5_2:+20032005 None:intergenic
GGAACAGAATTTGGTCTTCA+TGG 0.328708 5_2:-20032430 Msa0762210:intron
TCAGTATCAGGAACAGAATT+TGG 0.328828 5_2:-20032439 Msa0762210:CDS
ACTGCATAAAGACTGTAAAA+TGG 0.330409 5_2:+20026987 None:intergenic
GTTGCACTCCTCATTTCCTT+TGG 0.334119 5_2:-20032135 Msa0762210:CDS
TCCTTTCTTCCACTCATGTA+TGG 0.349135 5_2:+20027017 None:intergenic
TGATGGAGATATTGAAACTT+TGG 0.357074 5_2:-20030010 Msa0762210:CDS
TCCAATTGGCATGGCCAGTA+TGG 0.357216 5_2:-20025583 Msa0762210:CDS
ACATCTAGGGCATCAGTATC+AGG 0.357745 5_2:-20032451 Msa0762210:CDS
TACTGCTTCTATGGCTCATA+TGG 0.359546 5_2:-20033600 Msa0762210:CDS
CGGCCCTTGTGCGCCGCTAT+GGG 0.362379 5_2:+20029545 None:intergenic
ACTTCTCCACTTTCTCCAAT+TGG 0.366435 5_2:-20030535 Msa0762210:CDS
GTTGCCGGAAAACTCAGATT+TGG 0.366660 5_2:+20029466 None:intergenic
CTTGAACTTTCCAGTTGAAA+AGG 0.367423 5_2:+20025921 None:intergenic
GGAGTCATATCCAGGACTTC+AGG 0.367763 5_2:+20027038 None:intergenic
GCTGCAAAGCTGTTAGATAT+TGG 0.368655 5_2:-20033436 Msa0762210:intron
TGGAGGATATCTACGATCTA+AGG 0.370301 5_2:-20030230 Msa0762210:intron
CACAAGATTGGAAGTCATCT+TGG 0.379158 5_2:-20030496 Msa0762210:CDS
TTGAAATCTTCTTCTTATCC+TGG 0.382747 5_2:+20033759 None:intergenic
TTATGCAGTGGTCGTCCATT+TGG 0.385617 5_2:-20026973 Msa0762210:CDS
GCGGCGCACAAGGGCCGCTC+TGG 0.398177 5_2:-20029539 Msa0762210:CDS
GATCTTACTGTTGAGATTGA+TGG 0.398304 5_2:-20030027 Msa0762210:CDS
CTTCTCCACTTTCTCCAATT+GGG 0.405205 5_2:-20030534 Msa0762210:CDS
AGAAGAGAGAAGAGGTTATG+AGG 0.406519 5_2:-20033637 Msa0762210:CDS
TTGTGGTGATTCGTTATGTT+TGG 0.412049 5_2:-20033673 Msa0762210:CDS
ACAGAAGAAACAACTCTCAT+TGG 0.412098 5_2:-20030262 Msa0762210:CDS
GCAAAAGGGTTATCCTATAA+GGG 0.414040 5_2:+20033830 None:intergenic
GAGAGAAGAGGTTATGAGGT+TGG 0.414269 5_2:-20033633 Msa0762210:CDS
CCGCACAGAACGAGCAGATC+TGG 0.415871 5_2:+20029424 None:intergenic
AGGGATCATCAACGGCATTC+CGG 0.418215 5_2:+20025791 None:intergenic
TCCATACTGGCCATGCCAAT+TGG 0.421815 5_2:+20025582 None:intergenic
TTGAGATAGAATCAAACATC+TGG 0.424071 5_2:-20025297 Msa0762210:three_prime_UTR
CGGGGCGCAACTGGCTTCAC+CGG 0.424750 5_2:+20029628 None:intergenic
GTTCCTGTTTCAGTTTCTCA+TGG 0.426039 5_2:-20033506 Msa0762210:CDS
ACATTCAAGGAGAATGGTTC+AGG 0.428022 5_2:-20026902 Msa0762210:CDS
CTTCAACAAAATGTTCGTAA+TGG 0.428992 5_2:-20031675 Msa0762210:intron
CTATCGGGGAAGAAATACTA+TGG 0.429666 5_2:-20025728 Msa0762210:CDS
GAAAGAAAGATATTTGTTGC+CGG 0.432861 5_2:+20029451 None:intergenic
CAAGAAGAAGTTGACAATAC+TGG 0.433670 5_2:-20027253 Msa0762210:CDS
TCTTCACATAACAAACATAA+TGG 0.436838 5_2:+20026925 None:intergenic
ATCTTAGATAATATCCCAAT+TGG 0.440970 5_2:+20030520 None:intergenic
ATCTGTATGCAAGGTATCAT+AGG 0.441162 5_2:+20025531 None:intergenic
CGAGCACAACGCATGGTAGT+AGG 0.445877 5_2:+20033458 None:intergenic
GATAAAGTGCTTAAGGTGCC+TGG 0.447779 5_2:-20030079 Msa0762210:CDS
CAGGCACTCTCCAAAACCCC+TGG 0.448154 5_2:-20025965 Msa0762210:CDS
TTATCCTATAAGGGCAAAAT+GGG 0.448963 5_2:+20033839 None:intergenic
GAAACTTTGGAGGAGGCTCT+TGG 0.449157 5_2:-20029997 Msa0762210:CDS
TTGCGCCGCAGGACAGTGGC+TGG 0.452127 5_2:-20029654 Msa0762210:CDS
TTGGTGAGGCAGGGTCCAAT+TGG 0.452714 5_2:-20025597 Msa0762210:CDS
AGCGCTCCCACTCTTGATGC+GGG 0.453292 5_2:+20029609 None:intergenic
AAATGCAGATAAAGTGCTTA+AGG 0.454777 5_2:-20030086 Msa0762210:intron
GAGTCATATCCAGGACTTCA+GGG 0.463677 5_2:+20027039 None:intergenic
CGATCACTCCGTTGCGCCGC+AGG 0.465202 5_2:-20029665 Msa0762210:CDS
TTCTTAACTTCAATATTGAC+AGG 0.465879 5_2:+20032101 None:intergenic
AATATCCCAATTGGAGAAAG+TGG 0.468182 5_2:+20030529 None:intergenic
TCATGATGAGGCATCAAAGT+TGG 0.471953 5_2:-20031982 Msa0762210:CDS
TCCCTCCGTACAGCAGAAGC+AGG 0.476218 5_2:-20025827 Msa0762210:CDS
TTTAGATTCCAAAGGAAATG+AGG 0.478331 5_2:+20032127 None:intergenic
ATAGAAAATGAACATAAAAC+AGG 0.478670 5_2:+20024957 None:intergenic
AGAGTTGTTTCTTCTGTCAA+AGG 0.480437 5_2:+20030268 None:intergenic
CTAATTCAGAAGGCAAAAGA+AGG 0.480521 5_2:-20030559 Msa0762210:CDS
AGAATGGAGATTCAACTATC+GGG 0.481143 5_2:-20025743 Msa0762210:CDS
GCCACTGTCCTGCGGCGCAA+CGG 0.481600 5_2:+20029657 None:intergenic
TCAAATGTCTTCAACTACTA+AGG 0.483543 5_2:-20031778 Msa0762210:CDS
TGTTATGTGAAGAACATTCA+AGG 0.484307 5_2:-20026915 Msa0762210:CDS
TGGATCCTGTGTTGGGGACC+AGG 0.484738 5_2:-20033777 Msa0762210:five_prime_UTR
CATGATGAGGCATCAAAGTT+GGG 0.487207 5_2:-20031981 Msa0762210:CDS
ACCAGGCTTCTCAGCGGGAA+TGG 0.487378 5_2:-20029584 Msa0762210:CDS
TACCCATGAGAAACTGAAAC+AGG 0.487847 5_2:+20033503 None:intergenic
AGTTCAGTTCCCTGAAGTCC+TGG 0.488513 5_2:-20027048 Msa0762210:CDS
GGAAGAAGATGCAGCCGAGT+TGG 0.490012 5_2:+20025552 None:intergenic
GTATACAGATTCATTGCTAA+AGG 0.490489 5_2:+20025771 None:intergenic
TCTCCGTGCTTCTTTGTACC+TGG 0.491522 5_2:+20031824 None:intergenic
GCCATTCCCGCTGAGAAGCC+TGG 0.491944 5_2:+20029583 None:intergenic
CAGTGGACAATGATGCTGAT+AGG 0.494139 5_2:-20025504 Msa0762210:CDS
TATACAGATTCATTGCTAAA+GGG 0.498071 5_2:+20025772 None:intergenic
ACAAGGGCCGCTCTGGAAGA+GGG 0.498771 5_2:-20029532 Msa0762210:CDS
ATAATAAGTATAATTGTGGC+AGG 0.498980 5_2:-20029942 Msa0762210:intron
GCAGGACAGTGGCTGGCCGC+CGG 0.499004 5_2:-20029647 Msa0762210:CDS
ACGACGAGAATGTTACATCT+AGG 0.499991 5_2:-20032465 Msa0762210:CDS
AATCTGTATACCCAGAAGAA+TGG 0.500875 5_2:-20025759 Msa0762210:CDS
TGGAGATATTGAAACTTTGG+AGG 0.501477 5_2:-20030007 Msa0762210:CDS
GGCGCAACTGGCTTCACCGG+CGG 0.503356 5_2:+20029631 None:intergenic
TCATGTATGGAGTCATATCC+AGG 0.504692 5_2:+20027030 None:intergenic
AGTTGAATCTCCATTCTTCT+GGG 0.506322 5_2:+20025749 None:intergenic
TTCCTGTTTCAGTTTCTCAT+GGG 0.506577 5_2:-20033505 Msa0762210:CDS
AAGAATGGAGATTCAACTAT+CGG 0.508547 5_2:-20025744 Msa0762210:CDS
TTATCTAAGATACACAAGAT+TGG 0.510095 5_2:-20030508 Msa0762210:CDS
ATAAAGTGCTTAAGGTGCCT+GGG 0.510769 5_2:-20030078 Msa0762210:CDS
CCCTGCTTCTGCTGTACGGA+GGG 0.511074 5_2:+20025826 None:intergenic
TGAAGAACATTCAAGGAGAA+TGG 0.514909 5_2:-20026908 Msa0762210:CDS
TAAGACGCGGTTGAATTCCA+TGG 0.514967 5_2:-20025866 Msa0762210:CDS
TCCATACATGAGTGGAAGAA+AGG 0.515325 5_2:-20027018 Msa0762210:CDS
GTCGTTGACCTCCCTGGTGG+TGG 0.517256 5_2:+20032483 None:intergenic
AAGCATTCATGATATCCAAA+TGG 0.518832 5_2:+20026958 None:intergenic
GGTTCAGGACTGATGACAGC+AGG 0.519650 5_2:-20026887 Msa0762210:CDS
CTTATCCTGGTCCCCAACAC+AGG 0.521921 5_2:+20033772 None:intergenic
AAAGGAAATCATGTTAATGT+TGG 0.523088 5_2:-20032317 Msa0762210:CDS
TGCGCCCATAGCGGCGCACA+AGG 0.526910 5_2:-20029549 Msa0762210:CDS
ATTCTCGTCGTTGACCTCCC+TGG 0.528198 5_2:+20032477 None:intergenic
AAGACTCTTGACAGTTCGAC+AGG 0.528367 5_2:+20026134 None:intergenic
TGGAAGAATCGCATTTGTCC+AGG 0.528424 5_2:-20031842 Msa0762210:CDS
CGTCTTAGAAACAGCAGGAA+TGG 0.529122 5_2:+20025882 None:intergenic
TTGGAAGTCATCTTGGACAT+GGG 0.529236 5_2:-20030489 Msa0762210:CDS
CAAGCTTCAGTTTCTAGTGA+CGG 0.533804 5_2:-20033916 Msa0762210:five_prime_UTR
GCTACACCAGGCTTCTCAGC+GGG 0.535450 5_2:-20029589 Msa0762210:CDS
AAAGATAATAAGTATAATTG+TGG 0.535772 5_2:-20029946 Msa0762210:CDS
CTGTCCCTGCTTCTGCTGTA+CGG 0.536146 5_2:+20025822 None:intergenic
GTTGCGCCCCGCATCAAGAG+TGG 0.540791 5_2:-20029616 Msa0762210:CDS
CACTGAGAAATCTGTATGCA+AGG 0.542434 5_2:+20025522 None:intergenic
TTAGCAGTATTATCACTGAC+AGG 0.543034 5_2:+20032197 None:intergenic
TAGCGCTCCCACTCTTGATG+CGG 0.544271 5_2:+20029608 None:intergenic
AGAATCAGCATTTGTAGCCA+TGG 0.544421 5_2:+20025849 None:intergenic
TCCGTTGCGCCGCAGGACAG+TGG 0.545397 5_2:-20029658 Msa0762210:CDS
ATCAGTATTTGAATTACTCA+AGG 0.546719 5_2:+20031881 None:intergenic
CGACGAGAATGTTACATCTA+GGG 0.549584 5_2:-20032464 Msa0762210:CDS
AGTTGGAAGAAATTCCATAC+TGG 0.550381 5_2:+20025569 None:intergenic
CGTCACTAGAAACTGAAGCT+TGG 0.550491 5_2:+20033917 None:intergenic
GTAAGTGTCAAATTAGTCAC+TGG 0.552713 5_2:-20032543 Msa0762210:CDS
GTGCGGCTGCTTGTTGTCTG+TGG 0.555408 5_2:-20029407 Msa0762210:CDS
CACAGTTCCGTCGTTGTCGG+TGG 0.555570 5_2:+20032157 None:intergenic
CAACACAGTTCCGTCGTTGT+CGG 0.557421 5_2:+20032154 None:intergenic
TGCTGAAGAGAAGAGAGAAG+AGG 0.557595 5_2:-20033645 Msa0762210:CDS
GTCCTTCGATTACCACCACC+AGG 0.562640 5_2:-20032495 Msa0762210:CDS
CATACATGCTTCTTTATGCA+AGG 0.567312 5_2:-20026100 Msa0762210:intron
ATTGCTACTTACTGAACCCA+GGG 0.567598 5_2:+20025948 None:intergenic
TAACAGACACTTCTAAGTGC+AGG 0.568492 5_2:-20031914 Msa0762210:CDS
CAAATTAGTCACTGGAGACA+AGG 0.573340 5_2:-20032535 Msa0762210:CDS
TGAGAGGTATGAGAGAATGA+TGG 0.574311 5_2:-20030049 Msa0762210:CDS
TTTCCTCGCATAGAGCAAAA+GGG 0.575633 5_2:+20033816 None:intergenic
TATGCAATATATTTGTCTCA+AGG 0.576773 5_2:-20030308 Msa0762210:CDS
CAAGGGCCGCTCTGGAAGAG+GGG 0.576987 5_2:-20029531 Msa0762210:CDS
GAGGCAGGGTCCAATTGGCA+TGG 0.577228 5_2:-20025592 Msa0762210:CDS
TTTCAACTGGAAAGTTCAAG+AGG 0.577233 5_2:-20025918 Msa0762210:CDS
GTTTGAATATCTAATTCAGA+AGG 0.577524 5_2:-20030569 Msa0762210:CDS
AGCAGGGACAGCATTCTCAC+CGG 0.579039 5_2:-20025810 Msa0762210:CDS
AGCAACAGAAGCATTAATGC+TGG 0.579662 5_2:+20032274 None:intergenic
AGATATTGAAACTTTGGAGG+AGG 0.580830 5_2:-20030004 Msa0762210:CDS
AGCAACACTACTGATGAGAC+TGG 0.581283 5_2:-20032044 Msa0762210:CDS
CATTGCTACTTACTGAACCC+AGG 0.583614 5_2:+20025947 None:intergenic
TAAGAAGAAGATTTCAACAA+TGG 0.583962 5_2:-20033753 Msa0762210:exon
GTATTTGAATTACTCAAGGA+AGG 0.584094 5_2:+20031885 None:intergenic
AAGAGTGGGAGCGCTACACC+AGG 0.585022 5_2:-20029601 Msa0762210:CDS
TTTCCGTGGATCCTGTGTTG+GGG 0.586679 5_2:-20033783 Msa0762210:five_prime_UTR
TATATTTGTCTCAAGGAAGC+CGG 0.586904 5_2:-20030301 Msa0762210:CDS
GTTCTCAATAGGTCAGAAGA+GGG 0.588977 5_2:-20030611 Msa0762210:intron
CATACCTCTCAGATTTCCCC+AGG 0.592897 5_2:+20030061 None:intergenic
ATTGGAAGTCATCTTGGACA+TGG 0.593636 5_2:-20030490 Msa0762210:CDS
CAATAGGTCAGAAGAGGGGA+TGG 0.594667 5_2:-20030606 Msa0762210:intron
TCATCTTGGACATGGGAGAG+AGG 0.596485 5_2:-20030482 Msa0762210:CDS
TAGGAGGCTCCAGCAAGACT+CGG 0.596936 5_2:-20025485 Msa0762210:CDS
TGTGCAGTTTGCGCCCATAG+CGG 0.600236 5_2:-20029558 Msa0762210:CDS
GTATGGAATTTCTTCCAACT+CGG 0.603183 5_2:-20025566 Msa0762210:CDS
AGGCACTCTCCAAAACCCCT+GGG 0.603241 5_2:-20025964 Msa0762210:CDS
GCGGCGCAACGGAGTGATCG+TGG 0.603946 5_2:+20029668 None:intergenic
TACTACAAGTACAAAGGACT+CGG 0.604089 5_2:-20025650 Msa0762210:CDS
TAATTCAGAAGGCAAAAGAA+GGG 0.604303 5_2:-20030558 Msa0762210:CDS
TCCCTGGTGGTGGTAATCGA+AGG 0.605233 5_2:+20032493 None:intergenic
GGTCCCCAACACAGGATCCA+CGG 0.606466 5_2:+20033780 None:intergenic
TGTTCTCAATAGGTCAGAAG+AGG 0.607331 5_2:-20030612 Msa0762210:intron
GCGCCCATAGCGGCGCACAA+GGG 0.608020 5_2:-20029548 Msa0762210:CDS
TTGCGCCCCGCATCAAGAGT+GGG 0.609414 5_2:-20029615 Msa0762210:CDS
TCCCTGCTTCTGCTGTACGG+AGG 0.611151 5_2:+20025825 None:intergenic
TTTGCAGCGAGCACAACGCA+TGG 0.613380 5_2:+20033451 None:intergenic
AACCGCGTCTTAGAAACAGC+AGG 0.620180 5_2:+20025877 None:intergenic
GCGCTCCCACTCTTGATGCG+GGG 0.623822 5_2:+20029610 None:intergenic
TGGACAATGATGCTGATAGG+AGG 0.625036 5_2:-20025501 Msa0762210:CDS
GGCGGCCAGCCACTGTCCTG+CGG 0.629070 5_2:+20029649 None:intergenic
TTCCTGCTGTTTCTAAGACG+CGG 0.631911 5_2:-20025879 Msa0762210:CDS
AATGTCTTCAACTACTAAGG+AGG 0.633333 5_2:-20031775 Msa0762210:CDS
GAATGGAGATTCAACTATCG+GGG 0.641373 5_2:-20025742 Msa0762210:CDS
ATCCGACACATATCATGATG+AGG 0.641909 5_2:-20031994 Msa0762210:CDS
CCCTCCGTACAGCAGAAGCA+GGG 0.643033 5_2:-20025826 Msa0762210:CDS
CGCTACACCAGGCTTCTCAG+CGG 0.643714 5_2:-20029590 Msa0762210:CDS
TCACTGGAGACAAGGTCACA+AGG 0.645616 5_2:-20032527 Msa0762210:CDS
AATGGGAAAGATAGTTGCGT+CGG 0.645663 5_2:+20033856 None:intergenic
GTAGCTTCCACCGACAACGA+CGG 0.646206 5_2:-20032164 Msa0762210:CDS
ATTGCTAAAGGGATCATCAA+CGG 0.647422 5_2:+20025783 None:intergenic
GAAGAAGATTTCAACAATGG+CGG 0.652217 5_2:-20033750 Msa0762210:exon
CTCGTCGTTGACCTCCCTGG+TGG 0.656639 5_2:+20032480 None:intergenic
ATGAGTCATGAGTCTCGTGA+CGG 0.661809 5_2:+20032228 None:intergenic
GTTCAGGACTGATGACAGCA+GGG 0.663226 5_2:-20026886 Msa0762210:intron
GATGAGGCATCAAAGTTGGG+TGG 0.663974 5_2:-20031978 Msa0762210:CDS
TAAAGTGCTTAAGGTGCCTG+GGG 0.666066 5_2:-20030077 Msa0762210:CDS
TGCCTCATCATGATATGTGT+CGG 0.666217 5_2:+20031992 None:intergenic
TGTCCAGGTACAAAGAAGCA+CGG 0.666419 5_2:-20031827 Msa0762210:CDS
GATATGACTCCATACATGAG+TGG 0.668813 5_2:-20027026 Msa0762210:CDS
TTGCAGTACTACAAGTACAA+AGG 0.669235 5_2:-20025656 Msa0762210:CDS
TCGGGGAAGAAATACTATGG+TGG 0.679997 5_2:-20025725 Msa0762210:CDS
TGTCAAAGGACTTGATACAC+CGG 0.686828 5_2:+20030282 None:intergenic
TTCTCAATAGGTCAGAAGAG+GGG 0.698985 5_2:-20030610 Msa0762210:intron
GAAGAAGTTGACAATACTGG+AGG 0.702243 5_2:-20027250 Msa0762210:CDS
TTTCATCCCCTCTTCCAGAG+CGG 0.712573 5_2:+20029525 None:intergenic
TTCGATTACCACCACCAGGG+AGG 0.721514 5_2:-20032491 Msa0762210:CDS
TGATGTTCTAGCTGACGACG+TGG 0.722306 5_2:-20031862 Msa0762210:CDS
CCAGATCTGCTCGTTCTGTG+CGG 0.722895 5_2:-20029424 Msa0762210:CDS
TCCTTCGATTACCACCACCA+GGG 0.727082 5_2:-20032494 Msa0762210:CDS
TTGCTACTTACTGAACCCAG+GGG 0.730240 5_2:+20025949 None:intergenic
GGTGCCTGGGGAAATCTGAG+AGG 0.732683 5_2:-20030065 Msa0762210:CDS
CTTGCATACAGATTTCTCAG+TGG 0.734461 5_2:-20025521 Msa0762210:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTATTACAGATAAAAATT+GGG - chr5_2:20029199-20029218 Msa0762210:intron 10.0%
!! ATTATAATTAGTTCAAATAA+CGG - chr5_2:20030039-20030058 Msa0762210:CDS 10.0%
!!! CTTTAAATTTTAAAAACAAA+AGG + chr5_2:20032567-20032586 None:intergenic 10.0%
!!! CTTTTGTTTTTAAAATTTAA+AGG - chr5_2:20032565-20032584 Msa0762210:intron 10.0%
!! AATAAATAAACTTAGAATAA+TGG + chr5_2:20032621-20032640 None:intergenic 10.0%
!!! TTTGTTTGAAATTGATTAAT+GGG - chr5_2:20025554-20025573 Msa0762210:CDS 15.0%
!!! TATATGGTATTAATTTTGTT+AGG - chr5_2:20026554-20026573 Msa0762210:intron 15.0%
!! CATTAGATAAATTATGTATT+TGG - chr5_2:20027428-20027447 Msa0762210:intron 15.0%
!!! GATTTAAAATTTTGTTGTTT+TGG - chr5_2:20027577-20027596 Msa0762210:intron 15.0%
!! CATAGAAAGAAAAAAAATAA+AGG + chr5_2:20027825-20027844 None:intergenic 15.0%
!! AAAGATAATAAGTATAATTG+TGG - chr5_2:20028963-20028982 Msa0762210:intron 15.0%
!! GTAACATGATAAAAAATAAT+AGG + chr5_2:20029034-20029053 None:intergenic 15.0%
!! AATTTAATTACCATATACTA+TGG + chr5_2:20029098-20029117 None:intergenic 15.0%
!! CATTTATTACAGATAAAAAT+TGG - chr5_2:20029198-20029217 Msa0762210:intron 15.0%
!!! TTTTTAAGTAATTTTTTCGA+GGG + chr5_2:20029794-20029813 None:intergenic 15.0%
!! TTTAAAAATTAAGAGAAGAA+GGG - chr5_2:20030639-20030658 Msa0762210:intron 15.0%
!!! TTAAATCTTAAAGCTTTATT+GGG - chr5_2:20030681-20030700 Msa0762210:intron 15.0%
!!! TTTAAATAGTGATCTTTTAA+TGG - chr5_2:20030833-20030852 Msa0762210:intron 15.0%
!!! ATCTTTTGCTTTATATAAAT+AGG + chr5_2:20031273-20031292 None:intergenic 15.0%
!!! TATAACATAATCTCATTTTA+GGG + chr5_2:20032107-20032126 None:intergenic 15.0%
!!! AGGTTTTGTTTATTTGTTAT+TGG - chr5_2:20025204-20025223 Msa0762210:intron 20.0%
!!! TGTTTATTTGTTATTGGTTT+TGG - chr5_2:20025210-20025229 Msa0762210:three_prime_UTR 20.0%
!!! GTTTATTTGTTATTGGTTTT+GGG - chr5_2:20025211-20025230 Msa0762210:three_prime_UTR 20.0%
!!! GTTTGTTTGAAATTGATTAA+TGG - chr5_2:20025553-20025572 Msa0762210:CDS 20.0%
!!! AGAAATTTTGAAGCTTTTTT+AGG - chr5_2:20025602-20025621 Msa0762210:CDS 20.0%
!! AATTCAAGAGATAAATTTCA+AGG + chr5_2:20026173-20026192 None:intergenic 20.0%
!! AAAAAAACTAGAGATATTCA+GGG + chr5_2:20026254-20026273 None:intergenic 20.0%
!! AAAAAAAACTAGAGATATTC+AGG + chr5_2:20026255-20026274 None:intergenic 20.0%
!!! GTAAATTGTTTCTTGTAAAT+AGG - chr5_2:20027497-20027516 Msa0762210:intron 20.0%
!! CTAATCTTTATAATAAGTGT+AGG + chr5_2:20027871-20027890 None:intergenic 20.0%
!!! ATCATGAAGTTGTTATTAAT+AGG + chr5_2:20028230-20028249 None:intergenic 20.0%
!!! ATTTAACTTGTTCAACTATT+AGG - chr5_2:20028248-20028267 Msa0762210:intron 20.0%
!!! AAACAAAATCTTTTATGCAT+TGG - chr5_2:20028536-20028555 Msa0762210:intron 20.0%
!!! GAATCTAACAATCTATTTTA+TGG - chr5_2:20028709-20028728 Msa0762210:intron 20.0%
!!! GTTTTCAAATTTTATTGAGT+AGG - chr5_2:20028747-20028766 Msa0762210:intron 20.0%
!!! AAATTTTATTGAGTAGGAAA+GGG - chr5_2:20028753-20028772 Msa0762210:intron 20.0%
!! TTATCTTTATCCAAAATTTC+AGG + chr5_2:20028951-20028970 None:intergenic 20.0%
!!! ATTTATTTCCTTTTCTCAAA+CGG - chr5_2:20029115-20029134 Msa0762210:intron 20.0%
!!! CTTTTTAAGTAATTTTTTCG+AGG + chr5_2:20029795-20029814 None:intergenic 20.0%
!! CTCGAAAAAATTACTTAAAA+AGG - chr5_2:20029793-20029812 Msa0762210:intron 20.0%
!! AGATGTAAATATTCTGTTAT+TGG - chr5_2:20030105-20030124 Msa0762210:intron 20.0%
!!! CTTTAAAAATTAAGAGAAGA+AGG - chr5_2:20030638-20030657 Msa0762210:intron 20.0%
!!! GTTAAATCTTAAAGCTTTAT+TGG - chr5_2:20030680-20030699 Msa0762210:intron 20.0%
!! ACTATTTAAATCAATTTGAC+AGG + chr5_2:20030823-20030842 None:intergenic 20.0%
!!! AACAATATTTTGTGGAATTT+GGG - chr5_2:20030911-20030930 Msa0762210:intron 20.0%
!! TACAATTTACAAATGTTTAG+AGG - chr5_2:20031215-20031234 Msa0762210:intron 20.0%
!! ACAATTTACAAATGTTTAGA+GGG - chr5_2:20031216-20031235 Msa0762210:intron 20.0%
!! TAAATCACAAAAACTAACTA+AGG - chr5_2:20031293-20031312 Msa0762210:intron 20.0%
!! ATAAAACTCACAATAAAGTA+AGG - chr5_2:20031405-20031424 Msa0762210:intron 20.0%
!! TAAAACTCACAATAAAGTAA+GGG - chr5_2:20031406-20031425 Msa0762210:intron 20.0%
!!! TATGTTTTGTGTTTATGTTT+AGG - chr5_2:20031462-20031481 Msa0762210:intron 20.0%
!! CTATTTATAAGAGACAAATT+AGG + chr5_2:20031498-20031517 None:intergenic 20.0%
!!! CTAATTTGTCTCTTATAAAT+AGG - chr5_2:20031496-20031515 Msa0762210:intron 20.0%
!! AAAGTTGAACATAAAAATCT+AGG + chr5_2:20031558-20031577 None:intergenic 20.0%
!!! TTTTATGTTCAACTTTCATA+TGG - chr5_2:20031562-20031581 Msa0762210:intron 20.0%
!! TTTATGTTCAACTTTCATAT+GGG - chr5_2:20031563-20031582 Msa0762210:intron 20.0%
!! AATACGATTGTAAGAATATT+TGG + chr5_2:20031687-20031706 None:intergenic 20.0%
!!! TGTAATTTTGCTTTTACATT+AGG - chr5_2:20031774-20031793 Msa0762210:CDS 20.0%
!!! ATAACATAATCTCATTTTAG+GGG + chr5_2:20032106-20032125 None:intergenic 20.0%
!!! GTATAACATAATCTCATTTT+AGG + chr5_2:20032108-20032127 None:intergenic 20.0%
!! ATTCTTAATGAACTAAGTTT+AGG + chr5_2:20032204-20032223 None:intergenic 20.0%
!! TAGTTCATTAAGAATCAATT+TGG - chr5_2:20032209-20032228 Msa0762210:CDS 20.0%
!! AGTTCATTAAGAATCAATTT+GGG - chr5_2:20032210-20032229 Msa0762210:CDS 20.0%
!! TTTATAACTAGAATTGTAGA+AGG + chr5_2:20032378-20032397 None:intergenic 20.0%
!! TATATCTAGTATATGTTACA+AGG - chr5_2:20032422-20032441 Msa0762210:intron 20.0%
!! AACAAAAACAAAAATCATAG+TGG - chr5_2:20033470-20033489 Msa0762210:CDS 20.0%
!! ATAGAAAATGAACATAAAAC+AGG + chr5_2:20033955-20033974 None:intergenic 20.0%
! TAAGAAGAAGATTTCAACAA+TGG - chr5_2:20025156-20025175 Msa0762210:intron 25.0%
!! TTCTTTTGAATCATTGAATG+CGG - chr5_2:20025381-20025400 Msa0762210:CDS 25.0%
! AAACAATGGAAAATTATCCT+TGG - chr5_2:20025627-20025646 Msa0762210:CDS 25.0%
!! AAGAATACCCTAATTTTCTT+GGG + chr5_2:20025772-20025791 None:intergenic 25.0%
!! TACAACATTTTATGATACCT+CGG - chr5_2:20025879-20025898 Msa0762210:CDS 25.0%
! AAGAGTCATATCATCATATA+TGG - chr5_2:20026538-20026557 Msa0762210:intron 25.0%
! AAAGGAAATCATGTTAATGT+TGG - chr5_2:20026592-20026611 Msa0762210:intron 25.0%
! TTCTTAACTTCAATATTGAC+AGG + chr5_2:20026811-20026830 None:intergenic 25.0%
! ATCAGTATTTGAATTACTCA+AGG + chr5_2:20027031-20027050 None:intergenic 25.0%
!! ATTTTCAACAGATGTTAGAT+TGG + chr5_2:20027319-20027338 None:intergenic 25.0%
! AAAATGAGGTGTGAATATAT+TGG - chr5_2:20027334-20027353 Msa0762210:intron 25.0%
!! TAACATCATATCTTTTGCAA+GGG - chr5_2:20028181-20028200 Msa0762210:intron 25.0%
! CTATTAGGACCTTTAATTAA+TGG - chr5_2:20028263-20028282 Msa0762210:intron 25.0%
! GTGAAGATTCCATTAATTAA+AGG + chr5_2:20028275-20028294 None:intergenic 25.0%
! GTTTGAATATCTAATTCAGA+AGG - chr5_2:20028340-20028359 Msa0762210:intron 25.0%
! ATCTTAGATAATATCCCAAT+TGG + chr5_2:20028392-20028411 None:intergenic 25.0%
!! TTATCTAAGATACACAAGAT+TGG - chr5_2:20028401-20028420 Msa0762210:intron 25.0%
! TCATTCTTTATCAATGCTAT+TGG - chr5_2:20028494-20028513 Msa0762210:intron 25.0%
! TATGCAATATATTTGTCTCA+AGG - chr5_2:20028601-20028620 Msa0762210:intron 25.0%
!! CAAATTTTATTGAGTAGGAA+AGG - chr5_2:20028752-20028771 Msa0762210:intron 25.0%
! GAAACTTCAACATTTATGAA+AGG + chr5_2:20028792-20028811 None:intergenic 25.0%
! ATAATAAGTATAATTGTGGC+AGG - chr5_2:20028967-20028986 Msa0762210:intron 25.0%
! TTAAATAAATGTGACATGGA+AGG + chr5_2:20029005-20029024 None:intergenic 25.0%
! AGACTTAAATAAATGTGACA+TGG + chr5_2:20029009-20029028 None:intergenic 25.0%
!!! GTTTTATTAGCCATAGTATA+TGG - chr5_2:20029085-20029104 Msa0762210:intron 25.0%
! ACTATTATTCAAGAGAAAGT+AGG - chr5_2:20029165-20029184 Msa0762210:intron 25.0%
!! AAACAATTTCTCACCTTTTA+TGG - chr5_2:20029420-20029439 Msa0762210:CDS 25.0%
!!! CTGTTTTTAAAAAATCATCG+TGG - chr5_2:20029759-20029778 Msa0762210:intron 25.0%
! CACTTTAACTATCAAGTATT+TGG + chr5_2:20030464-20030483 None:intergenic 25.0%
!! CAAATACTTGATAGTTAAAG+TGG - chr5_2:20030462-20030481 Msa0762210:CDS 25.0%
!! GAAGTTTGAACAATATTTTG+TGG - chr5_2:20030903-20030922 Msa0762210:intron 25.0%
!! GAACAATATTTTGTGGAATT+TGG - chr5_2:20030910-20030929 Msa0762210:intron 25.0%
!! ACAATATTTTGTGGAATTTG+GGG - chr5_2:20030912-20030931 Msa0762210:intron 25.0%
! TCTAGTACAATACTAAAAGA+CGG + chr5_2:20031089-20031108 None:intergenic 25.0%
! ATTCTGATTTATGAACATTG+AGG - chr5_2:20031184-20031203 Msa0762210:intron 25.0%
! CAATTTACAAATGTTTAGAG+GGG - chr5_2:20031217-20031236 Msa0762210:intron 25.0%
! TTTATATAAATAGGACCACA+GGG + chr5_2:20031264-20031283 None:intergenic 25.0%
! AAAACTCACAATAAAGTAAG+GGG - chr5_2:20031407-20031426 Msa0762210:intron 25.0%
! AATCGTATTAAAACGATTTC+AGG - chr5_2:20031698-20031717 Msa0762210:CDS 25.0%
! TCTTCACATAACAAACATAA+TGG + chr5_2:20031987-20032006 None:intergenic 25.0%
!! TAACATAATCTCATTTTAGG+GGG + chr5_2:20032105-20032124 None:intergenic 25.0%
!!! TGTTCAACTCATTCATTTTT+TGG - chr5_2:20032140-20032159 Msa0762210:CDS 25.0%
!! ATGAACTAAGTTTAGGTTAT+AGG + chr5_2:20032197-20032216 None:intergenic 25.0%
! GTTCATTAAGAATCAATTTG+GGG - chr5_2:20032211-20032230 Msa0762210:CDS 25.0%
! AATTCAGAAGTGATTTGAAT+AGG - chr5_2:20032265-20032284 Msa0762210:CDS 25.0%
! AAGTGATTTGAATAGGAAAT+TGG - chr5_2:20032272-20032291 Msa0762210:CDS 25.0%
!! CTACAATTCTAGTTATAAAC+AGG - chr5_2:20032379-20032398 Msa0762210:intron 25.0%
!!! AACTACAAACCACTTTTAAT+GGG + chr5_2:20032484-20032503 None:intergenic 25.0%
!!! AAACTACAAACCACTTTTAA+TGG + chr5_2:20032485-20032504 None:intergenic 25.0%
!!! TTTGTAGTTTTGTACTTTCT+AGG - chr5_2:20032495-20032514 Msa0762210:CDS 25.0%
!!! TTTTAAGACACCTTTTGAAA+AGG - chr5_2:20032659-20032678 Msa0762210:intron 25.0%
! GAATTTCTGTATGTAAATTG+AGG - chr5_2:20032723-20032742 Msa0762210:intron 25.0%
! TATACAGATTCATTGCTAAA+GGG + chr5_2:20033140-20033159 None:intergenic 25.0%
!! GACTTTTCAGATTACATTTT+TGG - chr5_2:20033293-20033312 Msa0762210:intron 25.0%
!!! TAGCAGTGACAAATTTTTTA+AGG + chr5_2:20033511-20033530 None:intergenic 25.0%
!!! TCAAACATCTGGAATATTTT+TGG - chr5_2:20033623-20033642 Msa0762210:CDS 25.0%
! NNNNTTCTTGTGTACAAGTA+AGG - chr5_2:20033818-20033837 Msa0762210:five_prime_UTR 25.0%
!! CAATCACCTCTAATAATTTT+TGG - chr5_2:20033900-20033919 Msa0762210:five_prime_UTR 25.0%
! ACTGTACCAAAAATTATTAG+AGG + chr5_2:20033909-20033928 None:intergenic 25.0%
TTATCCTATAAGGGCAAAAT+GGG + chr5_2:20025073-20025092 None:intergenic 30.0%
TTGAAATCTTCTTCTTATCC+TGG + chr5_2:20025153-20025172 None:intergenic 30.0%
!!! TTTGAGATTTTAGGGTTTCA+AGG - chr5_2:20025184-20025203 Msa0762210:intron 30.0%
!! TCTTTTTCATGTTATGCATG+TGG - chr5_2:20025531-20025550 Msa0762210:CDS 30.0%
! TTGAAATTGATTAATGGGTG+TGG - chr5_2:20025559-20025578 Msa0762210:CDS 30.0%
TTTCTATGTTCCTAACCTAA+TGG + chr5_2:20025587-20025606 None:intergenic 30.0%
!!! AGCTTTTTTAGGTGAAACAA+TGG - chr5_2:20025613-20025632 Msa0762210:CDS 30.0%
AAGAAGAGAGATAGAGATAA+TGG - chr5_2:20025700-20025719 Msa0762210:CDS 30.0%
AGAAGAGAGATAGAGATAAT+GGG - chr5_2:20025701-20025720 Msa0762210:CDS 30.0%
TAGAATCACCCAAGAAAATT+AGG - chr5_2:20025761-20025780 Msa0762210:CDS 30.0%
AGAATCACCCAAGAAAATTA+GGG - chr5_2:20025762-20025781 Msa0762210:CDS 30.0%
! CAAGAATACCCTAATTTTCT+TGG + chr5_2:20025773-20025792 None:intergenic 30.0%
! AATTAGGGTATTCTTGATTG+AGG - chr5_2:20025777-20025796 Msa0762210:CDS 30.0%
! GTATTCTTGATTGAGGATTT+TGG - chr5_2:20025784-20025803 Msa0762210:CDS 30.0%
TATGTTTCTCAAAATAACCG+AGG + chr5_2:20025899-20025918 None:intergenic 30.0%
CACTTTGTGAAAATATCTCT+CGG + chr5_2:20025975-20025994 None:intergenic 30.0%
TGATGATATGACTCTTGAAA+CGG + chr5_2:20026534-20026553 None:intergenic 30.0%
TTTAGATTCCAAAGGAAATG+AGG + chr5_2:20026785-20026804 None:intergenic 30.0%
!! ACAGGATTTTTAGATTCCAA+AGG + chr5_2:20026793-20026812 None:intergenic 30.0%
GTATTTGAATTACTCAAGGA+AGG + chr5_2:20027027-20027046 None:intergenic 30.0%
TCAAATGTCTTCAACTACTA+AGG - chr5_2:20027131-20027150 Msa0762210:intron 30.0%
! ATTGTCAGTTTTTGTAGACT+TGG + chr5_2:20027175-20027194 None:intergenic 30.0%
! CGAACATTTTGTTGAAGATT+TGG + chr5_2:20027231-20027250 None:intergenic 30.0%
CTTCAACAAAATGTTCGTAA+TGG - chr5_2:20027234-20027253 Msa0762210:CDS 30.0%
TCTAACATCTGTTGAAAATG+AGG - chr5_2:20027320-20027339 Msa0762210:intron 30.0%
! CTGTTTCTTGTAAAAAAGAC+CGG + chr5_2:20027393-20027412 None:intergenic 30.0%
!! ACAAGAAACAGTTGACTTTT+TGG - chr5_2:20027402-20027421 Msa0762210:intron 30.0%
!!! AATTTTGTTGTTTTGGCAGT+TGG - chr5_2:20027584-20027603 Msa0762210:intron 30.0%
!!! ATTTTGTTGTTTTGGCAGTT+GGG - chr5_2:20027585-20027604 Msa0762210:intron 30.0%
GGAACTTTATTGTTATGACA+AGG - chr5_2:20027629-20027648 Msa0762210:intron 30.0%
! TTAGGAAACATTCTAGTTGT+TGG - chr5_2:20027961-20027980 Msa0762210:intron 30.0%
TGCAAAAGATATGATGTTAG+AGG + chr5_2:20028180-20028199 None:intergenic 30.0%
! CTAACATCATATCTTTTGCA+AGG - chr5_2:20028180-20028199 Msa0762210:intron 30.0%
ATCTTCACAATGTTCTCAAT+AGG - chr5_2:20028287-20028306 Msa0762210:intron 30.0%
TAATTCAGAAGGCAAAAGAA+GGG - chr5_2:20028351-20028370 Msa0762210:intron 30.0%
! AAGATGCACATGAATTTTTG+AGG - chr5_2:20028450-20028469 Msa0762210:intron 30.0%
! AAATGCAGATAAAGTGCTTA+AGG - chr5_2:20028823-20028842 Msa0762210:intron 30.0%
TGATGGAGATATTGAAACTT+TGG - chr5_2:20028899-20028918 Msa0762210:intron 30.0%
! ATTTACAGCACCTGAAATTT+TGG - chr5_2:20028938-20028957 Msa0762210:intron 30.0%
! TTTTATCATGTTACTGTGCT+TGG - chr5_2:20029040-20029059 Msa0762210:intron 30.0%
ACAGATAAAAATTGGGATCT+AGG - chr5_2:20029206-20029225 Msa0762210:intron 30.0%
! GAAAGAAAGATATTTGTTGC+CGG + chr5_2:20029461-20029480 None:intergenic 30.0%
!! ATGATTTTAAGCTAGGTTGA+GGG - chr5_2:20029611-20029630 Msa0762210:CDS 30.0%
!!! TTAAGTAATTTTTTCGAGGG+CGG + chr5_2:20029791-20029810 None:intergenic 30.0%
TGTATATACACACACTTAGT+GGG + chr5_2:20030009-20030028 None:intergenic 30.0%
ATGTATATACACACACTTAG+TGG + chr5_2:20030010-20030029 None:intergenic 30.0%
! CAACATTTTGTACTATATCG+CGG - chr5_2:20030221-20030240 Msa0762210:intron 30.0%
ACTATATCGCGGAATAAAAT+CGG - chr5_2:20030232-20030251 Msa0762210:CDS 30.0%
TTATTCATCTGTTGCATACA+TGG - chr5_2:20030588-20030607 Msa0762210:CDS 30.0%
ATGGTGATAAACTACTCAAA+GGG - chr5_2:20030607-20030626 Msa0762210:intron 30.0%
TTAAGATTTAACCTTCCAAG+AGG + chr5_2:20030672-20030691 None:intergenic 30.0%
!! AATCTTAAAGCTTTATTGGG+AGG - chr5_2:20030684-20030703 Msa0762210:intron 30.0%
!!! ATGTTGCGGTCAATTTTTTA+AGG + chr5_2:20030727-20030746 None:intergenic 30.0%
CAAACTTCTAATAGATGTTG+CGG + chr5_2:20030741-20030760 None:intergenic 30.0%
! GTGATCTTTTAATGGTTTTC+CGG - chr5_2:20030841-20030860 Msa0762210:intron 30.0%
!! TTTATGACCTTAAGTTGACT+TGG - chr5_2:20031158-20031177 Msa0762210:intron 30.0%
GAATATACCAAGTCAACTTA+AGG + chr5_2:20031168-20031187 None:intergenic 30.0%
CTTTATATAAATAGGACCAC+AGG + chr5_2:20031265-20031284 None:intergenic 30.0%
TCTTATTAAATGAGCGTTAG+CGG + chr5_2:20031357-20031376 None:intergenic 30.0%
AAACTCACAATAAAGTAAGG+GGG - chr5_2:20031408-20031427 Msa0762210:intron 30.0%
TCTCTTATAAATAGGACTAG+AGG - chr5_2:20031504-20031523 Msa0762210:intron 30.0%
CTCTTATAAATAGGACTAGA+GGG - chr5_2:20031505-20031524 Msa0762210:intron 30.0%
!!! TGTTGTTTATTTTGACAGTC+TGG - chr5_2:20031814-20031833 Msa0762210:CDS 30.0%
ACTGCATAAAGACTGTAAAA+TGG + chr5_2:20031925-20031944 None:intergenic 30.0%
! ATTTTACAGTCTTTATGCAG+TGG - chr5_2:20031924-20031943 Msa0762210:CDS 30.0%
AAGCATTCATGATATCCAAA+TGG + chr5_2:20031954-20031973 None:intergenic 30.0%
! ATCATGAATGCTTCATTTTC+AGG - chr5_2:20031961-20031980 Msa0762210:CDS 30.0%
TGTTATGTGAAGAACATTCA+AGG - chr5_2:20031994-20032013 Msa0762210:CDS 30.0%
!!! TATCTTTTTTTTGTGCCTGA+AGG - chr5_2:20032062-20032081 Msa0762210:CDS 30.0%
!! AACATAATCTCATTTTAGGG+GGG + chr5_2:20032104-20032123 None:intergenic 30.0%
! TAAGTTTAGGTTATAGGTTG+AGG + chr5_2:20032191-20032210 None:intergenic 30.0%
ATTAAGAATCAATTTGGGGA+GGG - chr5_2:20032215-20032234 Msa0762210:CDS 30.0%
CTTTGGACAAACTTAAAATG+AGG + chr5_2:20032306-20032325 None:intergenic 30.0%
!!! CATTTTAAGTTTGTCCAAAG+AGG - chr5_2:20032306-20032325 Msa0762210:CDS 30.0%
AATCAAATGTTCTTCCTCTT+TGG + chr5_2:20032323-20032342 None:intergenic 30.0%
GTATATGTTACAAGGTTGTA+AGG - chr5_2:20032430-20032449 Msa0762210:intron 30.0%
! TAATGGGTAAACAAGTTTCT+AGG + chr5_2:20032468-20032487 None:intergenic 30.0%
ACTTGTTTACCCATTAAAAG+TGG - chr5_2:20032472-20032491 Msa0762210:CDS 30.0%
TGGATTGCAATTTCTTTAGA+AGG + chr5_2:20032601-20032620 None:intergenic 30.0%
TTCTGTATGTAAATTGAGGA+TGG - chr5_2:20032727-20032746 Msa0762210:intron 30.0%
ATGCTCATTTGAAAATTTCC+AGG - chr5_2:20032925-20032944 Msa0762210:intron 30.0%
GTATACAGATTCATTGCTAA+AGG + chr5_2:20033141-20033160 None:intergenic 30.0%
AAGAATGGAGATTCAACTAT+CGG - chr5_2:20033165-20033184 Msa0762210:intron 30.0%
!!! TTCAGATTACATTTTTGGTG+AGG - chr5_2:20033298-20033317 Msa0762210:intron 30.0%
ACAAAAATCATAGTGGTAGA+TGG - chr5_2:20033477-20033496 Msa0762210:CDS 30.0%
CAAAAATCATAGTGGTAGAT+GGG - chr5_2:20033478-20033497 Msa0762210:CDS 30.0%
AAAAATCATAGTGGTAGATG+GGG - chr5_2:20033479-20033498 Msa0762210:CDS 30.0%
TTGAGATAGAATCAAACATC+TGG - chr5_2:20033612-20033631 Msa0762210:CDS 30.0%
GTTATCCTATAAGGGCAAAA+TGG + chr5_2:20025074-20025093 None:intergenic 35.0%
GCAAAAGGGTTATCCTATAA+GGG + chr5_2:20025082-20025101 None:intergenic 35.0%
AGCAAAAGGGTTATCCTATA+AGG + chr5_2:20025083-20025102 None:intergenic 35.0%
! GAAAAGTTGTGATTTTTCCG+TGG - chr5_2:20025112-20025131 Msa0762210:intron 35.0%
GAAGAAGATTTCAACAATGG+CGG - chr5_2:20025159-20025178 Msa0762210:intron 35.0%
!!! GTTATTGGTTTTGGGTTTTG+TGG - chr5_2:20025219-20025238 Msa0762210:three_prime_UTR 35.0%
TTGTGGTGATTCGTTATGTT+TGG - chr5_2:20025236-20025255 Msa0762210:three_prime_UTR 35.0%
ACAAGATACTACTGCTTCTA+TGG - chr5_2:20025300-20025319 Msa0762210:three_prime_UTR 35.0%
TTCCTGTTTCAGTTTCTCAT+GGG - chr5_2:20025404-20025423 Msa0762210:CDS 35.0%
TACACAGTGATGTGATATGT+TGG - chr5_2:20025668-20025687 Msa0762210:CDS 35.0%
GAAGAGAGATAGAGATAATG+GGG - chr5_2:20025702-20025721 Msa0762210:CDS 35.0%
TTTCTTGGGTGATTCTATCA+GGG + chr5_2:20025758-20025777 None:intergenic 35.0%
! TTTTCTTGGGTGATTCTATC+AGG + chr5_2:20025759-20025778 None:intergenic 35.0%
! TTCTTGATTGAGGATTTTGG+AGG - chr5_2:20025787-20025806 Msa0762210:CDS 35.0%
! GGAGGTCTAAGTCTATATTT+TGG - chr5_2:20025805-20025824 Msa0762210:CDS 35.0%
CAAACACACACAAAACACTA+AGG + chr5_2:20025923-20025942 None:intergenic 35.0%
! CGAGAGATATTTTCACAAAG+TGG - chr5_2:20025973-20025992 Msa0762210:intron 35.0%
ACTGAAGAGAGAAGAAACAT+AGG + chr5_2:20026283-20026302 None:intergenic 35.0%
GAATAACAACTAGAGATGTC+TGG + chr5_2:20026315-20026334 None:intergenic 35.0%
AAGCATGCTTTCTTGTAGTT+CGG - chr5_2:20026343-20026362 Msa0762210:intron 35.0%
GTAAGTGTCAAATTAGTCAC+TGG - chr5_2:20026366-20026385 Msa0762210:intron 35.0%
TCAGTATCAGGAACAGAATT+TGG - chr5_2:20026470-20026489 Msa0762210:intron 35.0%
!!! AGGTTTTTTGCAGAAAGCAA+AGG - chr5_2:20026574-20026593 Msa0762210:intron 35.0%
TTAGCAGTATTATCACTGAC+AGG + chr5_2:20026715-20026734 None:intergenic 35.0%
!!! TATGTGTCGGATTTAGCTTT+TGG + chr5_2:20026907-20026926 None:intergenic 35.0%
!! CACTTAGAAGTGTCTGTTAT+TGG + chr5_2:20026994-20027013 None:intergenic 35.0%
AATGTCTTCAACTACTAAGG+AGG - chr5_2:20027134-20027153 Msa0762210:intron 35.0%
AAATTGACTATTACTCCCTC+CGG - chr5_2:20027371-20027390 Msa0762210:intron 35.0%
TTCTTGTAAAAAAGACCGGA+GGG + chr5_2:20027389-20027408 None:intergenic 35.0%
TTTCTTGTAAAAAAGACCGG+AGG + chr5_2:20027390-20027409 None:intergenic 35.0%
TTTCTTGTAAATAGGACCAG+AGG - chr5_2:20027505-20027524 Msa0762210:intron 35.0%
TTCTTGTAAATAGGACCAGA+GGG - chr5_2:20027506-20027525 Msa0762210:intron 35.0%
GATGATAATAATACTCCCTC+TGG + chr5_2:20027524-20027543 None:intergenic 35.0%
! CTTTCCTTATGAACTTTTCG+TGG - chr5_2:20027608-20027627 Msa0762210:intron 35.0%
AGTTCCACGAAAAGTTCATA+AGG + chr5_2:20027615-20027634 None:intergenic 35.0%
AAGGTGAAACTATTTCCCTT+TGG - chr5_2:20027648-20027667 Msa0762210:intron 35.0%
TTTATGTGATGTAACTGCTC+TGG - chr5_2:20027731-20027750 Msa0762210:intron 35.0%
TAAGAGGGATGAGAGATTAA+AGG - chr5_2:20027754-20027773 Msa0762210:intron 35.0%
AAGAGGGATGAGAGATTAAA+GGG - chr5_2:20027755-20027774 Msa0762210:intron 35.0%
TCGTGATGAACGAAATACTT+GGG - chr5_2:20027901-20027920 Msa0762210:intron 35.0%
GAAATACTTGGGAATCAAGT+AGG - chr5_2:20027912-20027931 Msa0762210:intron 35.0%
CTAATTCAGAAGGCAAAAGA+AGG - chr5_2:20028350-20028369 Msa0762210:intron 35.0%
AATATCCCAATTGGAGAAAG+TGG + chr5_2:20028383-20028402 None:intergenic 35.0%
!!! TTGTTTTGAAGTAGCAGCTA+AGG + chr5_2:20028522-20028541 None:intergenic 35.0%
!! GCATTGGCTTTATGAGAAAT+TGG - chr5_2:20028552-20028571 Msa0762210:intron 35.0%
TATATTTGTCTCAAGGAAGC+CGG - chr5_2:20028608-20028627 Msa0762210:intron 35.0%
!! AGAGTTGTTTCTTCTGTCAA+AGG + chr5_2:20028644-20028663 None:intergenic 35.0%
ACAGAAGAAACAACTCTCAT+TGG - chr5_2:20028647-20028666 Msa0762210:intron 35.0%
! ACTCTCATTGGATACACTTT+TGG - chr5_2:20028659-20028678 Msa0762210:intron 35.0%
TTTATTGAGTAGGAAAGGGA+TGG - chr5_2:20028757-20028776 Msa0762210:intron 35.0%
TTATTGAGTAGGAAAGGGAT+GGG - chr5_2:20028758-20028777 Msa0762210:intron 35.0%
GATCTTACTGTTGAGATTGA+TGG - chr5_2:20028882-20028901 Msa0762210:intron 35.0%
TGGAGATATTGAAACTTTGG+AGG - chr5_2:20028902-20028921 Msa0762210:intron 35.0%
! AGATATTGAAACTTTGGAGG+AGG - chr5_2:20028905-20028924 Msa0762210:intron 35.0%
TAAATGTGACATGGAAGGAA+AGG + chr5_2:20029000-20029019 None:intergenic 35.0%
! TCCTTTTCTCAAACGGTATA+TGG - chr5_2:20029122-20029141 Msa0762210:intron 35.0%
TCCATATACCGTTTGAGAAA+AGG + chr5_2:20029126-20029145 None:intergenic 35.0%
AACTCAGATTTGGCCATAAA+AGG + chr5_2:20029436-20029455 None:intergenic 35.0%
! GTGAGTTTTCTTCATCTTTG+TGG - chr5_2:20029556-20029575 Msa0762210:CDS 35.0%
! GCTTCTCATGATTTTAAGCT+AGG - chr5_2:20029604-20029623 Msa0762210:CDS 35.0%
! CATGATTTTAAGCTAGGTTG+AGG - chr5_2:20029610-20029629 Msa0762210:CDS 35.0%
!!! AAGCGGTTTTAAAGAATCGT+GGG + chr5_2:20029705-20029724 None:intergenic 35.0%
!! AAAGGCACTATCAATCAAAC+TGG - chr5_2:20029811-20029830 Msa0762210:intron 35.0%
GATATAGCACTATTGTGTAG+CGG + chr5_2:20030180-20030199 None:intergenic 35.0%
GCTATTTAACAACACTGCTT+TGG - chr5_2:20030302-20030321 Msa0762210:CDS 35.0%
GATAGTTAAAGTGGTCAATG+CGG - chr5_2:20030471-20030490 Msa0762210:CDS 35.0%
CATGGTGATAAACTACTCAA+AGG - chr5_2:20030606-20030625 Msa0762210:intron 35.0%
TGGTGATAAACTACTCAAAG+GGG - chr5_2:20030608-20030627 Msa0762210:intron 35.0%
!! GTTTTTCAGATGTGAATTCG+TGG - chr5_2:20030766-20030785 Msa0762210:intron 35.0%
CTTCAACAATTGATTGCTGT+TGG - chr5_2:20031013-20031032 Msa0762210:intron 35.0%
TAAAACCCATGGGACAAAAT+TGG + chr5_2:20031142-20031161 None:intergenic 35.0%
CTTAAGGTCATAAAACCCAT+GGG + chr5_2:20031152-20031171 None:intergenic 35.0%
ACTTAAGGTCATAAAACCCA+TGG + chr5_2:20031153-20031172 None:intergenic 35.0%
!!! GGTATTTTTGGGAAAGAAGT+TGG + chr5_2:20031336-20031355 None:intergenic 35.0%
TTAATAAGACCCACTTGCAT+AGG - chr5_2:20031368-20031387 Msa0762210:intron 35.0%
TAATAAGACCCACTTGCATA+GGG - chr5_2:20031369-20031388 Msa0762210:intron 35.0%
CAGTATTGTCAACTTCTTCT+TGG + chr5_2:20031658-20031677 None:intergenic 35.0%
CAAGAAGAAGTTGACAATAC+TGG - chr5_2:20031656-20031675 Msa0762210:intron 35.0%
TGAAGAACATTCAAGGAGAA+TGG - chr5_2:20032001-20032020 Msa0762210:CDS 35.0%
CATTAAGAATCAATTTGGGG+AGG - chr5_2:20032214-20032233 Msa0762210:CDS 35.0%
! CAAGCTTCTAAGAACAAAAC+AGG + chr5_2:20032242-20032261 None:intergenic 35.0%
CAAACTTAAAATGAGGACTC+AGG + chr5_2:20032299-20032318 None:intergenic 35.0%
TTTCTAGGCTTAAGAAGCTA+TGG - chr5_2:20032510-20032529 Msa0762210:CDS 35.0%
! ATTTGCCAGTCCTTTTCAAA+AGG + chr5_2:20032672-20032691 None:intergenic 35.0%
CATACATGCTTCTTTATGCA+AGG - chr5_2:20032809-20032828 Msa0762210:intron 35.0%
CTTGAACTTTCCAGTTGAAA+AGG + chr5_2:20032991-20033010 None:intergenic 35.0%
TTTCAACTGGAAAGTTCAAG+AGG - chr5_2:20032991-20033010 Msa0762210:intron 35.0%
ATTGCTAAAGGGATCATCAA+CGG + chr5_2:20033129-20033148 None:intergenic 35.0%
AATCTGTATACCCAGAAGAA+TGG - chr5_2:20033150-20033169 Msa0762210:intron 35.0%
AGTTGAATCTCCATTCTTCT+GGG + chr5_2:20033163-20033182 None:intergenic 35.0%
TAGTTGAATCTCCATTCTTC+TGG + chr5_2:20033164-20033183 None:intergenic 35.0%
AGAATGGAGATTCAACTATC+GGG - chr5_2:20033166-20033185 Msa0762210:intron 35.0%
TTGCAGTACTACAAGTACAA+AGG - chr5_2:20033253-20033272 Msa0762210:intron 35.0%
TACTACAAGTACAAAGGACT+CGG - chr5_2:20033259-20033278 Msa0762210:intron 35.0%
!!! ATTACATTTTTGGTGAGGCA+GGG - chr5_2:20033303-20033322 Msa0762210:intron 35.0%
AGTTGGAAGAAATTCCATAC+TGG + chr5_2:20033343-20033362 None:intergenic 35.0%
GTATGGAATTTCTTCCAACT+CGG - chr5_2:20033343-20033362 Msa0762210:intron 35.0%
! ATCTGTATGCAAGGTATCAT+AGG + chr5_2:20033381-20033400 None:intergenic 35.0%
!! CAAGCTTCAGTTTCTAGTGA+CGG - chr5_2:20024993-20025012 Msa0762210:three_prime_UTR 40.0%
AATGGGAAAGATAGTTGCGT+CGG + chr5_2:20025056-20025075 None:intergenic 40.0%
! CTTTCCCATTTTGCCCTTAT+AGG - chr5_2:20025066-20025085 Msa0762210:three_prime_UTR 40.0%
TTTCCTCGCATAGAGCAAAA+GGG + chr5_2:20025096-20025115 None:intergenic 40.0%
! TTTTCCTCGCATAGAGCAAA+AGG + chr5_2:20025097-20025116 None:intergenic 40.0%
!! ATGGCGGTGTTTGAGATTTT+AGG - chr5_2:20025175-20025194 Msa0762210:intron 40.0%
!! TGGCGGTGTTTGAGATTTTA+GGG - chr5_2:20025176-20025195 Msa0762210:intron 40.0%
AGAAGAGAGAAGAGGTTATG+AGG - chr5_2:20025272-20025291 Msa0762210:three_prime_UTR 40.0%
TACTGCTTCTATGGCTCATA+TGG - chr5_2:20025309-20025328 Msa0762210:exon 40.0%
GTTCCTGTTTCAGTTTCTCA+TGG - chr5_2:20025403-20025422 Msa0762210:CDS 40.0%
TACCCATGAGAAACTGAAAC+AGG + chr5_2:20025409-20025428 None:intergenic 40.0%
GCTGCAAAGCTGTTAGATAT+TGG - chr5_2:20025473-20025492 Msa0762210:CDS 40.0%
! TTAATGGGTGTGGTACCATT+AGG - chr5_2:20025569-20025588 Msa0762210:CDS 40.0%
! ACTGTGTAGACGAAGTGTTT+GGG + chr5_2:20025656-20025675 None:intergenic 40.0%
!! AGAGATAATGGGGTGTTGAA+TGG - chr5_2:20025712-20025731 Msa0762210:CDS 40.0%
!! GAGATAATGGGGTGTTGAAT+GGG - chr5_2:20025713-20025732 Msa0762210:CDS 40.0%
! TAGCCAATGATATTTGCTGC+TGG - chr5_2:20026010-20026029 Msa0762210:intron 40.0%
! TTTGACTCGTGATATTGTCG+TGG - chr5_2:20026119-20026138 Msa0762210:CDS 40.0%
! TTGACTCGTGATATTGTCGT+GGG - chr5_2:20026120-20026139 Msa0762210:CDS 40.0%
AGCATGCTTTCTTGTAGTTC+GGG - chr5_2:20026344-20026363 Msa0762210:intron 40.0%
CAAATTAGTCACTGGAGACA+AGG - chr5_2:20026374-20026393 Msa0762210:intron 40.0%
ACGACGAGAATGTTACATCT+AGG - chr5_2:20026444-20026463 Msa0762210:intron 40.0%
CGACGAGAATGTTACATCTA+GGG - chr5_2:20026445-20026464 Msa0762210:intron 40.0%
! GGAACAGAATTTGGTCTTCA+TGG - chr5_2:20026479-20026498 Msa0762210:intron 40.0%
!! AGCAACAGAAGCATTAATGC+TGG + chr5_2:20026638-20026657 None:intergenic 40.0%
ATCCGACACATATCATGATG+AGG - chr5_2:20026915-20026934 Msa0762210:CDS 40.0%
TGCCTCATCATGATATGTGT+CGG + chr5_2:20026920-20026939 None:intergenic 40.0%
! TCATGATGAGGCATCAAAGT+TGG - chr5_2:20026927-20026946 Msa0762210:CDS 40.0%
! CATGATGAGGCATCAAAGTT+GGG - chr5_2:20026928-20026947 Msa0762210:CDS 40.0%
TAACAGACACTTCTAAGTGC+AGG - chr5_2:20026995-20027014 Msa0762210:CDS 40.0%
!! AACGCTAACTTTTGAAGGCA+AGG + chr5_2:20027205-20027224 None:intergenic 40.0%
! GGAACAACGCTAACTTTTGA+AGG + chr5_2:20027210-20027229 None:intergenic 40.0%
! CTTTTGAGCTTCTAAACTGC+TGG + chr5_2:20027287-20027306 None:intergenic 40.0%
ATGTAACTGCTCTGGTAAGA+GGG - chr5_2:20027739-20027758 Msa0762210:intron 40.0%
AGAGGGATGAGAGATTAAAG+GGG - chr5_2:20027756-20027775 Msa0762210:intron 40.0%
AGAGATTAAAGGGGATAGTG+AGG - chr5_2:20027765-20027784 Msa0762210:intron 40.0%
CTCGTGATGAACGAAATACT+TGG - chr5_2:20027900-20027919 Msa0762210:intron 40.0%
TTCCGACAAAAGTAGCTTGA+AGG + chr5_2:20027938-20027957 None:intergenic 40.0%
!! CTACTTTTGTCGGAACGTTT+AGG - chr5_2:20027943-20027962 Msa0762210:intron 40.0%
! GAAACATTCTAGTTGTTGGC+TGG - chr5_2:20027965-20027984 Msa0762210:intron 40.0%
! GAGGCATTTCATTAGCAAGA+GGG + chr5_2:20028106-20028125 None:intergenic 40.0%
!! AGAGGCATTTCATTAGCAAG+AGG + chr5_2:20028107-20028126 None:intergenic 40.0%
TGTTCTCAATAGGTCAGAAG+AGG - chr5_2:20028297-20028316 Msa0762210:intron 40.0%
GTTCTCAATAGGTCAGAAGA+GGG - chr5_2:20028298-20028317 Msa0762210:intron 40.0%
TTCTCAATAGGTCAGAAGAG+GGG - chr5_2:20028299-20028318 Msa0762210:intron 40.0%
ACTTCTCCACTTTCTCCAAT+TGG - chr5_2:20028374-20028393 Msa0762210:intron 40.0%
CTTCTCCACTTTCTCCAATT+GGG - chr5_2:20028375-20028394 Msa0762210:intron 40.0%
CACAAGATTGGAAGTCATCT+TGG - chr5_2:20028413-20028432 Msa0762210:intron 40.0%
ATTGGAAGTCATCTTGGACA+TGG - chr5_2:20028419-20028438 Msa0762210:intron 40.0%
TTGGAAGTCATCTTGGACAT+GGG - chr5_2:20028420-20028439 Msa0762210:intron 40.0%
TGAGAAATTGGTCCATCAAC+AGG - chr5_2:20028564-20028583 Msa0762210:intron 40.0%
GAGAAATTGGTCCATCAACA+GGG - chr5_2:20028565-20028584 Msa0762210:intron 40.0%
AGAAATTGGTCCATCAACAG+GGG - chr5_2:20028566-20028585 Msa0762210:intron 40.0%
TGTCAAAGGACTTGATACAC+CGG + chr5_2:20028630-20028649 None:intergenic 40.0%
! CTCATTGGATACACTTTTGG+AGG - chr5_2:20028662-20028681 Msa0762210:intron 40.0%
TGGAGGATATCTACGATCTA+AGG - chr5_2:20028679-20028698 Msa0762210:intron 40.0%
! ATAAAGTGCTTAAGGTGCCT+GGG - chr5_2:20028831-20028850 Msa0762210:intron 40.0%
! TGAGAGGTATGAGAGAATGA+TGG - chr5_2:20028860-20028879 Msa0762210:intron 40.0%
! ATGGCCAAATCTGAGTTTTC+CGG - chr5_2:20029439-20029458 Msa0762210:CDS 40.0%
!! TTTTAAAGAATCGTGGGGGT+GGG + chr5_2:20029699-20029718 None:intergenic 40.0%
!!! AGCGGTTTTAAAGAATCGTG+GGG + chr5_2:20029704-20029723 None:intergenic 40.0%
!!! GAAGCGGTTTTAAAGAATCG+TGG + chr5_2:20029706-20029725 None:intergenic 40.0%
!!! AGTTTTTTCCCTGTCCAGAT+GGG + chr5_2:20029741-20029760 None:intergenic 40.0%
TACACACACTTAGTGGGATA+AGG + chr5_2:20030003-20030022 None:intergenic 40.0%
TTATCCTGCTATCCCAATCT+CGG - chr5_2:20030070-20030089 Msa0762210:CDS 40.0%
TGGACCAATGTTGTCAATTG+CGG - chr5_2:20030125-20030144 Msa0762210:intron 40.0%
CTATCCGCAATTGACAACAT+TGG + chr5_2:20030132-20030151 None:intergenic 40.0%
ATGTTGTCAATTGCGGATAG+TGG - chr5_2:20030132-20030151 Msa0762210:intron 40.0%
!! TTGCGGATAGTGGAAAATAG+TGG - chr5_2:20030142-20030161 Msa0762210:intron 40.0%
GTGCTATATCGTCACTACAA+CGG - chr5_2:20030190-20030209 Msa0762210:intron 40.0%
ATAGATGCGCTATACCACTA+TGG + chr5_2:20030278-20030297 None:intergenic 40.0%
! ATTTTCCTACTAGGTGGAGT+TGG + chr5_2:20030380-20030399 None:intergenic 40.0%
! CAACCAAGCATTTTCCTACT+AGG + chr5_2:20030389-20030408 None:intergenic 40.0%
!! AAACTACTCAAAGGGGTGTT+AGG - chr5_2:20030615-20030634 Msa0762210:intron 40.0%
GCATGACTTCAAAGAGAATC+CGG + chr5_2:20030863-20030882 None:intergenic 40.0%
TCTCATTTGTCTCATTGCAG+TGG + chr5_2:20030885-20030904 None:intergenic 40.0%
GACAAAATTGGCATTGTGCT+TGG + chr5_2:20031130-20031149 None:intergenic 40.0%
! ACAATGCCAATTTTGTCCCA+TGG - chr5_2:20031133-20031152 Msa0762210:intron 40.0%
! CAATGCCAATTTTGTCCCAT+GGG - chr5_2:20031134-20031153 Msa0762210:intron 40.0%
! TGGTTCTATATTACTCCCTG+TGG - chr5_2:20031246-20031265 Msa0762210:intron 40.0%
! TGAGCGTTAGCGGTATTTTT+GGG + chr5_2:20031347-20031366 None:intergenic 40.0%
! ATGAGCGTTAGCGGTATTTT+TGG + chr5_2:20031348-20031367 None:intergenic 40.0%
CAATAAAGTAAGGGGGCAAA+AGG - chr5_2:20031415-20031434 Msa0762210:intron 40.0%
GAAGAAGTTGACAATACTGG+AGG - chr5_2:20031659-20031678 Msa0762210:intron 40.0%
TCATGTATGGAGTCATATCC+AGG + chr5_2:20031882-20031901 None:intergenic 40.0%
GATATGACTCCATACATGAG+TGG - chr5_2:20031883-20031902 Msa0762210:CDS 40.0%
TCCATACATGAGTGGAAGAA+AGG - chr5_2:20031891-20031910 Msa0762210:CDS 40.0%
TCCTTTCTTCCACTCATGTA+TGG + chr5_2:20031895-20031914 None:intergenic 40.0%
ACATTCAAGGAGAATGGTTC+AGG - chr5_2:20032007-20032026 Msa0762210:CDS 40.0%
!! ATAATCTCATTTTAGGGGGG+AGG + chr5_2:20032101-20032120 None:intergenic 40.0%
!! AGACACCTTTTGAAAAGGAC+TGG - chr5_2:20032664-20032683 Msa0762210:intron 40.0%
! ATTGCTACTTACTGAACCCA+GGG + chr5_2:20032964-20032983 None:intergenic 40.0%
! AGCAATGCAACCTTTTCAAC+TGG - chr5_2:20032978-20032997 Msa0762210:intron 40.0%
AGAATCAGCATTTGTAGCCA+TGG + chr5_2:20033063-20033082 None:intergenic 40.0%
GAATGGAGATTCAACTATCG+GGG - chr5_2:20033167-20033186 Msa0762210:intron 40.0%
CTATCGGGGAAGAAATACTA+TGG - chr5_2:20033181-20033200 Msa0762210:intron 40.0%
!!! GATTACATTTTTGGTGAGGC+AGG - chr5_2:20033302-20033321 Msa0762210:intron 40.0%
CACTGAGAAATCTGTATGCA+AGG + chr5_2:20033390-20033409 None:intergenic 40.0%
CTTGCATACAGATTTCTCAG+TGG - chr5_2:20033388-20033407 Msa0762210:intron 40.0%
! GTACAGCAGAACTTTTGTCA+TGG + chr5_2:20033538-20033557 None:intergenic 40.0%
CGTCACTAGAAACTGAAGCT+TGG + chr5_2:20024995-20025014 None:intergenic 45.0%
! TAACCCTTTTGCTCTATGCG+AGG - chr5_2:20025090-20025109 Msa0762210:three_prime_UTR 45.0%
! TTTTTCCGTGGATCCTGTGT+TGG - chr5_2:20025124-20025143 Msa0762210:intron 45.0%
! TTTTCCGTGGATCCTGTGTT+GGG - chr5_2:20025125-20025144 Msa0762210:intron 45.0%
TGCTGAAGAGAAGAGAGAAG+AGG - chr5_2:20025264-20025283 Msa0762210:three_prime_UTR 45.0%
GAGAGAAGAGGTTATGAGGT+TGG - chr5_2:20025276-20025295 Msa0762210:three_prime_UTR 45.0%
! CACTGTGTAGACGAAGTGTT+TGG + chr5_2:20025657-20025676 None:intergenic 45.0%
! CAATGATATTTGCTGCTGGC+CGG - chr5_2:20026014-20026033 Msa0762210:intron 45.0%
! ATTTCTTGCCCCGTGTTTTC+CGG + chr5_2:20026036-20026055 None:intergenic 45.0%
GGAAAACATGGGGCAAAAGT+GGG - chr5_2:20026068-20026087 Msa0762210:intron 45.0%
GAAAACATGGGGCAAAAGTG+GGG - chr5_2:20026069-20026088 Msa0762210:intron 45.0%
TGACTCGTGATATTGTCGTG+GGG - chr5_2:20026121-20026140 Msa0762210:CDS 45.0%
! ACATCTAGGGCATCAGTATC+AGG - chr5_2:20026458-20026477 Msa0762210:intron 45.0%
ATGAGTCATGAGTCTCGTGA+CGG + chr5_2:20026684-20026703 None:intergenic 45.0%
GTTGCACTCCTCATTTCCTT+TGG - chr5_2:20026774-20026793 Msa0762210:intron 45.0%
AGCAACACTACTGATGAGAC+TGG - chr5_2:20026865-20026884 Msa0762210:intron 45.0%
TGGAAGAATCGCATTTGTCC+AGG - chr5_2:20027067-20027086 Msa0762210:CDS 45.0%
TGTCCAGGTACAAAGAAGCA+CGG - chr5_2:20027082-20027101 Msa0762210:intron 45.0%
CCACAGTTTGTAAGGCCAAA+GGG + chr5_2:20027666-20027685 None:intergenic 45.0%
!! CCTTTGGCCTTACAAACTGT+GGG - chr5_2:20027664-20027683 Msa0762210:intron 45.0%
ACCTGTTCCCACAGTTTGTA+AGG + chr5_2:20027674-20027693 None:intergenic 45.0%
GATGTAACTGCTCTGGTAAG+AGG - chr5_2:20027738-20027757 Msa0762210:intron 45.0%
!!! GGCCTTCAAGCTACTTTTGT+CGG - chr5_2:20027933-20027952 Msa0762210:intron 45.0%
TAGCATAACAGCTGCAGTAG+AGG + chr5_2:20028125-20028144 None:intergenic 45.0%
TAATGCAGCACTCCAATGCT+TGG - chr5_2:20028143-20028162 Msa0762210:intron 45.0%
GGTACTTGCATCGTTTCGAA+TGG + chr5_2:20028209-20028228 None:intergenic 45.0%
! GATAAAGTGCTTAAGGTGCC+TGG - chr5_2:20028830-20028849 Msa0762210:intron 45.0%
! TAAAGTGCTTAAGGTGCCTG+GGG - chr5_2:20028832-20028851 Msa0762210:intron 45.0%
GTTGCCGGAAAACTCAGATT+TGG + chr5_2:20029446-20029465 None:intergenic 45.0%
! TTTTCTGCAGTGGGCCTTAA+GGG + chr5_2:20029657-20029676 None:intergenic 45.0%
! TTTTTCTGCAGTGGGCCTTA+AGG + chr5_2:20029658-20029677 None:intergenic 45.0%
AAGGCCCACTGCAGAAAAAT+AGG - chr5_2:20029659-20029678 Msa0762210:CDS 45.0%
AGGCCCACTGCAGAAAAATA+GGG - chr5_2:20029660-20029679 Msa0762210:CDS 45.0%
!! GCTCCCTATTTTTCTGCAGT+GGG + chr5_2:20029666-20029685 None:intergenic 45.0%
!! AGCTCCCTATTTTTCTGCAG+TGG + chr5_2:20029667-20029686 None:intergenic 45.0%
TTTAAAGAATCGTGGGGGTG+GGG + chr5_2:20029698-20029717 None:intergenic 45.0%
!!! GTTTTAAAGAATCGTGGGGG+TGG + chr5_2:20029700-20029719 None:intergenic 45.0%
!!! GCGGTTTTAAAGAATCGTGG+GGG + chr5_2:20029703-20029722 None:intergenic 45.0%
!!! CAGTTTTTTCCCTGTCCAGA+TGG + chr5_2:20029742-20029761 None:intergenic 45.0%
ACACTTAGTGGGATAAGGCT+TGG + chr5_2:20029998-20030017 None:intergenic 45.0%
! CACTATGGCATAGCGGAATT+TGG + chr5_2:20030263-20030282 None:intergenic 45.0%
CAAATTCCGCTATGCCATAG+TGG - chr5_2:20030261-20030280 Msa0762210:CDS 45.0%
GCTATACCACTATGGCATAG+CGG + chr5_2:20030270-20030289 None:intergenic 45.0%
CATGACTCGTGTCATGTGTA+AGG + chr5_2:20030329-20030348 None:intergenic 45.0%
CTTACACATGACACGAGTCA+TGG - chr5_2:20030327-20030346 Msa0762210:intron 45.0%
! TGACACGAGTCATGGCTTTT+TGG - chr5_2:20030335-20030354 Msa0762210:intron 45.0%
CTTAACCAACTCCACCTAGT+AGG - chr5_2:20030372-20030391 Msa0762210:intron 45.0%
! CCAAGCATTTTCCTACTAGG+TGG + chr5_2:20030386-20030405 None:intergenic 45.0%
CCACCTAGTAGGAAAATGCT+TGG - chr5_2:20030383-20030402 Msa0762210:intron 45.0%
AAGAAGGGTCACAAACCTCT+TGG - chr5_2:20030654-20030673 Msa0762210:intron 45.0%
TTCTATCAAAGCCCGGAAGT+AGG + chr5_2:20030799-20030818 None:intergenic 45.0%
GACAGGATTCTATCAAAGCC+CGG + chr5_2:20030806-20030825 None:intergenic 45.0%
AATTTGGGGAAAGAATGCCG+TGG - chr5_2:20030926-20030945 Msa0762210:intron 45.0%
ATGCCGTGGAATCTTGTGAT+TGG - chr5_2:20030940-20030959 Msa0762210:intron 45.0%
CAGCCAATCACAAGATTCCA+CGG + chr5_2:20030946-20030965 None:intergenic 45.0%
! AATGTTTAGAGGGGCACACA+TGG - chr5_2:20031226-20031245 Msa0762210:intron 45.0%
TCCATCTTCCCTATGCAAGT+GGG + chr5_2:20031380-20031399 None:intergenic 45.0%
GAGTCATATCCAGGACTTCA+GGG + chr5_2:20031873-20031892 None:intergenic 45.0%
TTATGCAGTGGTCGTCCATT+TGG - chr5_2:20031936-20031955 Msa0762210:CDS 45.0%
TGGCATTTGTGCTTCTCTTC+AGG - chr5_2:20032747-20032766 Msa0762210:intron 45.0%
AAGACTCTTGACAGTTCGAC+AGG + chr5_2:20032778-20032797 None:intergenic 45.0%
GCAAGGTAATAATGCTGCAG+TGG - chr5_2:20032826-20032845 Msa0762210:intron 45.0%
! TTGCTACTTACTGAACCCAG+GGG + chr5_2:20032963-20032982 None:intergenic 45.0%
! CATTGCTACTTACTGAACCC+AGG + chr5_2:20032965-20032984 None:intergenic 45.0%
CGTCTTAGAAACAGCAGGAA+TGG + chr5_2:20033030-20033049 None:intergenic 45.0%
!! TTCCTGCTGTTTCTAAGACG+CGG - chr5_2:20033030-20033049 Msa0762210:intron 45.0%
TAAGACGCGGTTGAATTCCA+TGG - chr5_2:20033043-20033062 Msa0762210:intron 45.0%
TCGGGGAAGAAATACTATGG+TGG - chr5_2:20033184-20033203 Msa0762210:intron 45.0%
CAGTGGACAATGATGCTGAT+AGG - chr5_2:20033405-20033424 Msa0762210:intron 45.0%
TGGACAATGATGCTGATAGG+AGG - chr5_2:20033408-20033427 Msa0762210:intron 45.0%
CTTTATCTTCCGAGTCTTGC+TGG + chr5_2:20033436-20033455 None:intergenic 45.0%
!! TTATATTATTATCTTATTAT+TGG + chr5_2:20029886-20029905 None:intergenic 5.0%
!! AAAATAATATATTTATCAAA+TGG + chr5_2:20030976-20030995 None:intergenic 5.0%
!!! GATAAATATATTATTTTATT+AGG - chr5_2:20030979-20030998 Msa0762210:intron 5.0%
TTTCCGTGGATCCTGTGTTG+GGG - chr5_2:20025126-20025145 Msa0762210:intron 50.0%
GGGTGTGGTACCATTAGGTT+AGG - chr5_2:20025574-20025593 Msa0762210:CDS 50.0%
!! ATGGGGTGTTGAATGGGTGT+TGG - chr5_2:20025719-20025738 Msa0762210:CDS 50.0%
!! TGGGGTGTTGAATGGGTGTT+GGG - chr5_2:20025720-20025739 Msa0762210:CDS 50.0%
!! TGAATGGGTGTTGGGGAGTT+AGG - chr5_2:20025728-20025747 Msa0762210:CDS 50.0%
!! GAATGGGTGTTGGGGAGTTA+GGG - chr5_2:20025729-20025748 Msa0762210:CDS 50.0%
!! AATGGGTGTTGGGGAGTTAG+GGG - chr5_2:20025730-20025749 Msa0762210:CDS 50.0%
CGGCCAGCAGCAAATATCAT+TGG + chr5_2:20026016-20026035 None:intergenic 50.0%
GGGAAAACATGGGGCAAAAG+TGG - chr5_2:20026067-20026086 Msa0762210:intron 50.0%
TCACTGGAGACAAGGTCACA+AGG - chr5_2:20026382-20026401 Msa0762210:intron 50.0%
TCCTTCGATTACCACCACCA+GGG - chr5_2:20026415-20026434 Msa0762210:intron 50.0%
CAACACAGTTCCGTCGTTGT+CGG + chr5_2:20026758-20026777 None:intergenic 50.0%
! GATGAGGCATCAAAGTTGGG+TGG - chr5_2:20026931-20026950 Msa0762210:CDS 50.0%
! TGATGTTCTAGCTGACGACG+TGG - chr5_2:20027047-20027066 Msa0762210:CDS 50.0%
TCTCCGTGCTTCTTTGTACC+TGG + chr5_2:20027088-20027107 None:intergenic 50.0%
!! CCCTTTGGCCTTACAAACTG+TGG - chr5_2:20027663-20027682 Msa0762210:intron 50.0%
CCCACAGTTTGTAAGGCCAA+AGG + chr5_2:20027667-20027686 None:intergenic 50.0%
GCCTTACAAACTGTGGGAAC+AGG - chr5_2:20027670-20027689 Msa0762210:intron 50.0%
GCTGAGTATACGCCAAGCAT+TGG + chr5_2:20028158-20028177 None:intergenic 50.0%
CAATAGGTCAGAAGAGGGGA+TGG - chr5_2:20028303-20028322 Msa0762210:intron 50.0%
TCATCTTGGACATGGGAGAG+AGG - chr5_2:20028427-20028446 Msa0762210:intron 50.0%
CATACCTCTCAGATTTCCCC+AGG + chr5_2:20028851-20028870 None:intergenic 50.0%
! GAAACTTTGGAGGAGGCTCT+TGG - chr5_2:20028912-20028931 Msa0762210:intron 50.0%
TTTCATCCCCTCTTCCAGAG+CGG + chr5_2:20029387-20029406 None:intergenic 50.0%
TTAAAGAATCGTGGGGGTGG+GGG + chr5_2:20029697-20029716 None:intergenic 50.0%
TGGGCAAATCAGGAAGGAAG+CGG + chr5_2:20029722-20029741 None:intergenic 50.0%
! TCCTTCCTGATTTGCCCATC+TGG - chr5_2:20029724-20029743 Msa0762210:intron 50.0%
TCCAGATGGGCAAATCAGGA+AGG + chr5_2:20029728-20029747 None:intergenic 50.0%
! CTGATTTGCCCATCTGGACA+GGG - chr5_2:20029730-20029749 Msa0762210:intron 50.0%
CTGCTATCCCAATCTCGGAT+CGG - chr5_2:20030075-20030094 Msa0762210:CDS 50.0%
AAACCAGCCGATCCGAGATT+GGG + chr5_2:20030085-20030104 None:intergenic 50.0%
TAAACCAGCCGATCCGAGAT+TGG + chr5_2:20030086-20030105 None:intergenic 50.0%
AGGGTCACAAACCTCTTGGA+AGG - chr5_2:20030658-20030677 Msa0762210:intron 50.0%
!! CGTGGACTAGTACCTACTTC+CGG - chr5_2:20030784-20030803 Msa0762210:intron 50.0%
!! GTGGACTAGTACCTACTTCC+GGG - chr5_2:20030785-20030804 Msa0762210:intron 50.0%
ACCCACTTGCATAGGGAAGA+TGG - chr5_2:20031376-20031395 Msa0762210:intron 50.0%
GTCCATCTTCCCTATGCAAG+TGG + chr5_2:20031381-20031400 None:intergenic 50.0%
AGTTCAGTTCCCTGAAGTCC+TGG - chr5_2:20031861-20031880 Msa0762210:CDS 50.0%
GGAGTCATATCCAGGACTTC+AGG + chr5_2:20031874-20031893 None:intergenic 50.0%
GTTCAGGACTGATGACAGCA+GGG - chr5_2:20032023-20032042 Msa0762210:CDS 50.0%
GGAGTGGAAAAGAGACCTTC+AGG + chr5_2:20032080-20032099 None:intergenic 50.0%
! CTTACTGAACCCAGGGGTTT+TGG + chr5_2:20032957-20032976 None:intergenic 50.0%
AACCGCGTCTTAGAAACAGC+AGG + chr5_2:20033035-20033054 None:intergenic 50.0%
AGGGATCATCAACGGCATTC+CGG + chr5_2:20033121-20033140 None:intergenic 50.0%
TCCAATTGGCATGGCCAGTA+TGG - chr5_2:20033326-20033345 Msa0762210:intron 50.0%
TCCATACTGGCCATGCCAAT+TGG + chr5_2:20033330-20033349 None:intergenic 50.0%
CTTATCCTGGTCCCCAACAC+AGG + chr5_2:20025140-20025159 None:intergenic 55.0%
CGAGCACAACGCATGGTAGT+AGG + chr5_2:20025454-20025473 None:intergenic 55.0%
TTTGCAGCGAGCACAACGCA+TGG + chr5_2:20025461-20025480 None:intergenic 55.0%
! ACGAAGTGTTTGGGCGTCCA+AGG + chr5_2:20025647-20025666 None:intergenic 55.0%
!! GGGGTGTTGAATGGGTGTTG+GGG - chr5_2:20025721-20025740 Msa0762210:CDS 55.0%
TTGCTGCTGGCCGGAAAACA+CGG - chr5_2:20026023-20026042 Msa0762210:intron 55.0%
GGCAAGAAATTTGCCGCTGG+CGG - chr5_2:20026046-20026065 Msa0762210:intron 55.0%
GCAAGAAATTTGCCGCTGGC+GGG - chr5_2:20026047-20026066 Msa0762210:intron 55.0%
GTCCTTCGATTACCACCACC+AGG - chr5_2:20026414-20026433 Msa0762210:intron 55.0%
!! TCCCTGGTGGTGGTAATCGA+AGG + chr5_2:20026419-20026438 None:intergenic 55.0%
TTCGATTACCACCACCAGGG+AGG - chr5_2:20026418-20026437 Msa0762210:intron 55.0%
ATTCTCGTCGTTGACCTCCC+TGG + chr5_2:20026435-20026454 None:intergenic 55.0%
GTAGCTTCCACCGACAACGA+CGG - chr5_2:20026745-20026764 Msa0762210:intron 55.0%
CTCAACTGCACCCCTGTTGA+TGG + chr5_2:20028579-20028598 None:intergenic 55.0%
TAGCGCTCCCACTCTTGATG+CGG + chr5_2:20029304-20029323 None:intergenic 55.0%
TGTGCAGTTTGCGCCCATAG+CGG - chr5_2:20029351-20029370 Msa0762210:intron 55.0%
CCAGATCTGCTCGTTCTGTG+CGG - chr5_2:20029485-20029504 Msa0762210:CDS 55.0%
TGTGGCTGCTATGCTGTGTG+CGG - chr5_2:20029520-20029539 Msa0762210:CDS 55.0%
TTGTGGCTGCTCGTTGTGTG+TGG - chr5_2:20029573-20029592 Msa0762210:CDS 55.0%
TAAAGAATCGTGGGGGTGGG+GGG + chr5_2:20029696-20029715 None:intergenic 55.0%
CCTGTCCAGATGGGCAAATC+AGG + chr5_2:20029732-20029751 None:intergenic 55.0%
! CCTGATTTGCCCATCTGGAC+AGG - chr5_2:20029729-20029748 Msa0762210:intron 55.0%
CGATCCGAGATTGGGATAGC+AGG + chr5_2:20030077-20030096 None:intergenic 55.0%
TATCCCAATCTCGGATCGGC+TGG - chr5_2:20030079-20030098 Msa0762210:CDS 55.0%
GGTTCAGGACTGATGACAGC+AGG - chr5_2:20032022-20032041 Msa0762210:CDS 55.0%
!! CTCATTTTAGGGGGGAGGAG+TGG + chr5_2:20032096-20032115 None:intergenic 55.0%
AGGCACTCTCCAAAACCCCT+GGG - chr5_2:20032945-20032964 Msa0762210:intron 55.0%
CTGTCCCTGCTTCTGCTGTA+CGG + chr5_2:20033090-20033109 None:intergenic 55.0%
AGCAGGGACAGCATTCTCAC+CGG - chr5_2:20033099-20033118 Msa0762210:intron 55.0%
TTGGTGAGGCAGGGTCCAAT+TGG - chr5_2:20033312-20033331 Msa0762210:intron 55.0%
GGAAGAAGATGCAGCCGAGT+TGG + chr5_2:20033360-20033379 None:intergenic 55.0%
TAGGAGGCTCCAGCAAGACT+CGG - chr5_2:20033424-20033443 Msa0762210:intron 55.0%
GGTCCCCAACACAGGATCCA+CGG + chr5_2:20025132-20025151 None:intergenic 60.0%
TGGATCCTGTGTTGGGGACC+AGG - chr5_2:20025132-20025151 Msa0762210:intron 60.0%
TGCTGCTGGCCGGAAAACAC+GGG - chr5_2:20026024-20026043 Msa0762210:intron 60.0%
CGGGGCAAGAAATTTGCCGC+TGG - chr5_2:20026043-20026062 Msa0762210:intron 60.0%
TTGCCGCTGGCGGGAAAACA+TGG - chr5_2:20026056-20026075 Msa0762210:intron 60.0%
TGCCGCTGGCGGGAAAACAT+GGG - chr5_2:20026057-20026076 Msa0762210:intron 60.0%
CACAGTTCCGTCGTTGTCGG+TGG + chr5_2:20026755-20026774 None:intergenic 60.0%
GGTGCCTGGGGAAATCTGAG+AGG - chr5_2:20028844-20028863 Msa0762210:intron 60.0%
TTGCGCCCCGCATCAAGAGT+GGG - chr5_2:20029294-20029313 Msa0762210:intron 60.0%
AGCGCTCCCACTCTTGATGC+GGG + chr5_2:20029303-20029322 None:intergenic 60.0%
!! AAGAGTGGGAGCGCTACACC+AGG - chr5_2:20029308-20029327 Msa0762210:intron 60.0%
CGCTACACCAGGCTTCTCAG+CGG - chr5_2:20029319-20029338 Msa0762210:intron 60.0%
GCTACACCAGGCTTCTCAGC+GGG - chr5_2:20029320-20029339 Msa0762210:intron 60.0%
ACCAGGCTTCTCAGCGGGAA+TGG - chr5_2:20029325-20029344 Msa0762210:intron 60.0%
!! ACAAGGGCCGCTCTGGAAGA+GGG - chr5_2:20029377-20029396 Msa0762210:intron 60.0%
CCGCACAGAACGAGCAGATC+TGG + chr5_2:20029488-20029507 None:intergenic 60.0%
!! GTGCGGCTGCTTGTTGTCTG+TGG - chr5_2:20029502-20029521 Msa0762210:CDS 60.0%
AAAGAATCGTGGGGGTGGGG+GGG + chr5_2:20029695-20029714 None:intergenic 60.0%
!!! CAGGGGTTTTGGAGAGTGCC+TGG + chr5_2:20032946-20032965 None:intergenic 60.0%
CAGGCACTCTCCAAAACCCC+TGG - chr5_2:20032944-20032963 Msa0762210:intron 60.0%
TCCCTCCGTACAGCAGAAGC+AGG - chr5_2:20033082-20033101 Msa0762210:intron 60.0%
CCCTGCTTCTGCTGTACGGA+GGG + chr5_2:20033086-20033105 None:intergenic 60.0%
CCCTCCGTACAGCAGAAGCA+GGG - chr5_2:20033083-20033102 Msa0762210:intron 60.0%
TCCCTGCTTCTGCTGTACGG+AGG + chr5_2:20033087-20033106 None:intergenic 60.0%
GAGGCAGGGTCCAATTGGCA+TGG - chr5_2:20033317-20033336 Msa0762210:intron 60.0%
GCTGCTGGCCGGAAAACACG+GGG - chr5_2:20026025-20026044 Msa0762210:intron 65.0%
GCCGCTGGCGGGAAAACATG+GGG - chr5_2:20026058-20026077 Msa0762210:intron 65.0%
! GCCCCATGTTTTCCCGCCAG+CGG + chr5_2:20026062-20026081 None:intergenic 65.0%
GTCGTTGACCTCCCTGGTGG+TGG + chr5_2:20026429-20026448 None:intergenic 65.0%
CTCGTCGTTGACCTCCCTGG+TGG + chr5_2:20026432-20026451 None:intergenic 65.0%
CTCTTGATGCGGGGCGCAAC+TGG + chr5_2:20029293-20029312 None:intergenic 65.0%
GTTGCGCCCCGCATCAAGAG+TGG - chr5_2:20029293-20029312 Msa0762210:intron 65.0%
GCGCTCCCACTCTTGATGCG+GGG + chr5_2:20029302-20029321 None:intergenic 65.0%
GCCATTCCCGCTGAGAAGCC+TGG + chr5_2:20029329-20029348 None:intergenic 65.0%
!! CACAAGGGCCGCTCTGGAAG+AGG - chr5_2:20029376-20029395 Msa0762210:intron 65.0%
!! CAAGGGCCGCTCTGGAAGAG+GGG - chr5_2:20029378-20029397 Msa0762210:intron 65.0%
GCGGCGCAACGGAGTGATCG+TGG + chr5_2:20029244-20029263 None:intergenic 70.0%
CGATCACTCCGTTGCGCCGC+AGG - chr5_2:20029244-20029263 Msa0762210:intron 70.0%
TCCGTTGCGCCGCAGGACAG+TGG - chr5_2:20029251-20029270 Msa0762210:intron 70.0%
GCCACTGTCCTGCGGCGCAA+CGG + chr5_2:20029255-20029274 None:intergenic 70.0%
TTGCGCCGCAGGACAGTGGC+TGG - chr5_2:20029255-20029274 Msa0762210:intron 70.0%
! GGCGCAACTGGCTTCACCGG+CGG + chr5_2:20029281-20029300 None:intergenic 70.0%
! CGGGGCGCAACTGGCTTCAC+CGG + chr5_2:20029284-20029303 None:intergenic 70.0%
TGCGCCCATAGCGGCGCACA+AGG - chr5_2:20029360-20029379 Msa0762210:intron 70.0%
GCGCCCATAGCGGCGCACAA+GGG - chr5_2:20029361-20029380 Msa0762210:intron 70.0%
CGGCCCTTGTGCGCCGCTAT+GGG + chr5_2:20029367-20029386 None:intergenic 70.0%
GGCGGCCAGCCACTGTCCTG+CGG + chr5_2:20029263-20029282 None:intergenic 75.0%
! GCAGGACAGTGGCTGGCCGC+CGG - chr5_2:20029262-20029281 Msa0762210:intron 75.0%
GCGGCCCTTGTGCGCCGCTA+TGG + chr5_2:20029368-20029387 None:intergenic 75.0%
! GCGGCGCACAAGGGCCGCTC+TGG - chr5_2:20029370-20029389 Msa0762210:intron 80.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 20024952 20033979 20024952 ID=Msa0762210;Name=Msa0762210
chr5_2 mRNA 20024952 20033979 20024952 ID=Msa0762210-mRNA-1;Parent=Msa0762210;Name=Msa0762210-mRNA-1;_AED=0.11;_eAED=0.11;_QI=223|0.72|0.83|0.91|0.90|0.83|12|275|963
chr5_2 exon 20024952 20025109 20024952 ID=Msa0762210-mRNA-1:exon:8521;Parent=Msa0762210-mRNA-1
chr5_2 exon 20025210 20025984 20025210 ID=Msa0762210-mRNA-1:exon:8520;Parent=Msa0762210-mRNA-1
chr5_2 exon 20026101 20026162 20026101 ID=Msa0762210-mRNA-1:exon:8519;Parent=Msa0762210-mRNA-1
chr5_2 exon 20026887 20027099 20026887 ID=Msa0762210-mRNA-1:exon:8518;Parent=Msa0762210-mRNA-1
chr5_2 exon 20027212 20027296 20027212 ID=Msa0762210-mRNA-1:exon:8517;Parent=Msa0762210-mRNA-1
chr5_2 exon 20029395 20029703 20029395 ID=Msa0762210-mRNA-1:exon:8516;Parent=Msa0762210-mRNA-1
chr5_2 exon 20029943 20030100 20029943 ID=Msa0762210-mRNA-1:exon:8515;Parent=Msa0762210-mRNA-1
chr5_2 exon 20030231 20030345 20030231 ID=Msa0762210-mRNA-1:exon:8514;Parent=Msa0762210-mRNA-1
chr5_2 exon 20030460 20030622 20030460 ID=Msa0762210-mRNA-1:exon:8513;Parent=Msa0762210-mRNA-1
chr5_2 exon 20031676 20032344 20031676 ID=Msa0762210-mRNA-1:exon:8512;Parent=Msa0762210-mRNA-1
chr5_2 exon 20032431 20032570 20032431 ID=Msa0762210-mRNA-1:exon:8511;Parent=Msa0762210-mRNA-1
chr5_2 exon 20033437 20033979 20033437 ID=Msa0762210-mRNA-1:exon:8510;Parent=Msa0762210-mRNA-1
chr5_2 five_prime_UTR 20033757 20033979 20033757 ID=Msa0762210-mRNA-1:five_prime_utr;Parent=Msa0762210-mRNA-1
chr5_2 CDS 20033437 20033756 20033437 ID=Msa0762210-mRNA-1:cds;Parent=Msa0762210-mRNA-1
chr5_2 CDS 20032431 20032570 20032431 ID=Msa0762210-mRNA-1:cds;Parent=Msa0762210-mRNA-1
chr5_2 CDS 20031676 20032344 20031676 ID=Msa0762210-mRNA-1:cds;Parent=Msa0762210-mRNA-1
chr5_2 CDS 20030460 20030622 20030460 ID=Msa0762210-mRNA-1:cds;Parent=Msa0762210-mRNA-1
chr5_2 CDS 20030231 20030345 20030231 ID=Msa0762210-mRNA-1:cds;Parent=Msa0762210-mRNA-1
chr5_2 CDS 20029943 20030100 20029943 ID=Msa0762210-mRNA-1:cds;Parent=Msa0762210-mRNA-1
chr5_2 CDS 20029395 20029703 20029395 ID=Msa0762210-mRNA-1:cds;Parent=Msa0762210-mRNA-1
chr5_2 CDS 20027212 20027296 20027212 ID=Msa0762210-mRNA-1:cds;Parent=Msa0762210-mRNA-1
chr5_2 CDS 20026887 20027099 20026887 ID=Msa0762210-mRNA-1:cds;Parent=Msa0762210-mRNA-1
chr5_2 CDS 20026101 20026162 20026101 ID=Msa0762210-mRNA-1:cds;Parent=Msa0762210-mRNA-1
chr5_2 CDS 20025327 20025984 20025327 ID=Msa0762210-mRNA-1:cds;Parent=Msa0762210-mRNA-1
chr5_2 three_prime_UTR 20025210 20025326 20025210 ID=Msa0762210-mRNA-1:three_prime_utr;Parent=Msa0762210-mRNA-1
chr5_2 three_prime_UTR 20024952 20025109 20024952 ID=Msa0762210-mRNA-1:three_prime_utr;Parent=Msa0762210-mRNA-1
Gene Sequence

>Msa0762210

ATGGCGGTGTTTGAGATTTTAGGGTTTCAAGGTTTTGTTTATTTGTTATTGGTTTTGGGTTTTGTGGTGATTCGTTATGTTTGGAGAAATGCTGAAGAGAAGAGAGAAGAGGTTATGAGGTTGGTACAAGATACTACTGCTTCTATGGCTCATATGGAAGCTTATGATGATTCAGATGAAATTTCATTTTCAGCTTCAAATTCAGCTTCTTTTGAATCATTGAATGCGGTTCCTGTTTCAGTTTCTCATGGGTATCAATGTGCTGTTTGTTATTCTCCTACTACCATGCGTTGTGCTCGCTGCAAAGCTGTTAGATATTGTTCGGGTAAGTGTCAAATTAGTCACTGGAGACAAGGTCACAAGGACGAATGTTGTCCTTCGATTACCACCACCAGGGAGGTCAACGACGAGAATGTTACATCTAGGGCATCAGTATCAGGAACAGAATTTGGTCTTCATGAAAGCAAAGGAAATCATGTTAATGTTGGATCTTACAACGATTCGCATTCCAGCATTAATGCTTCTGTTGCTGCAAGAGAATCATTTGATGATAACCGTCACGAGACTCATGACTCATTTACAAAACCTGTCAGTGATAATACTGCTAACGACACATGTGTAGCTTCCACCGACAACGACGGAACTGTGTTGCACTCCTCATTTCCTTTGGAATCTAAAAATCCTGTCAATATTGAAGTTAAGAATTCTAGTTCAAGTAAAAGAAGCAAGAAAAAGTCTAGCAACACTACTGATGAGACTGGATTTGAATCAAAAGTTCCAAAAGCTAAATCCGACACATATCATGATGAGGCATCAAAGTTGGGTGGTCATCAACACAAAAGAAGAGTTTCATTTGTTGAAAAACCAATAACAGACACTTCTAAGTGCAGGACTGTGCCTTCCTTGAGTAATTCAAATACTGATGTTCTAGCTGACGACGTGGAAGAATCGCATTTGTCCAGGTACAAAGAAGCACGGAGATCATCATCATCTAGTTCTCGTGATCAAATGTCTTCAACTACTAAGGAGGATTTGATTTCACATTCCAAGTCTACAAAAACTGACAATTATCATGCCTTGCCTTCAAAAGTTAGCGTTGTTCCAAATCTTCAACAAAATGTTCGTAATGGTCAGAAGAGGGGATGGTGTTTTATGTGCGAGTTTGAATATCTAATTCAGAAGGCAAAAGAAGGGACTTCTCCACTTTCTCCAATTGGGATATTATCTAAGATACACAAGATTGGAAGTCATCTTGGACATGGGAGAGAGGAAGATGCACATGAATTTTTGAGGGGTGCAGTTGAGACTATGCAATATATTTGTCTCAAGGAAGCCGGTGTATCAAGTCCTTTGACAGAAGAAACAACTCTCATTGGATACACTTTTGGAGGATATCTACGATCTAAGATAAAGTGCTTAAGGTGCCTGGGGAAATCTGAGAGGTATGAGAGAATGATGGATCTTACTGTTGAGATTGATGGAGATATTGAAACTTTGGAGGAGGCTCTTGGACAATTTACAGCACCTGAAATTTTGGATAAAGATAATAAGTATAATTGTGGCAGGTTATTATTAGTGCCACGATCACTCCGTTGCGCCGCAGGACAGTGGCTGGCCGCCGGTGAAGCCAGTTGCGCCCCGCATCAAGAGTGGGAGCGCTACACCAGGCTTCTCAGCGGGAATGGCGCTGTGCAGTTTGCGCCCATAGCGGCGCACAAGGGCCGCTCTGGAAGAGGGGATGAAAAAGTCGATAAAAGAAACAATTTCTCACCTTTTATGGCCAAATCTGAGTTTTCCGGCAACAAATATCTTTCTTTCGTGACCAGATCTGCTCGTTCTGTGCGGCTGCTTGTTGTCTGTGGCTGCTATGCTGTATGTAAATCGTACGAGAAAGCCAAGAAGAAGTTGACAATACTGGAGGCACCAAATATTCTTACAATCGTATTAAAACGATTTCAGTCTGGTAACTTTGAAAAGTTGAATAAGTCAGTTCAGTTCCCTGAAGTCCTGGATATGACTCCATACATGAGTGGAAGAAAGGATAAATCTCCATTTTACAGTCTTTATGCAGTGGTCGTCCATTTGGATATCATGAATGCTTCATTTTCAGGCCATTATGTTTGTTATGTGAAGAACATTCAAGGAGAATGGTTCAGGACTGATGACAGCAGGGTAGAACCTGTCGAACTGTCAAGAGTCTTATCAGAAAGCGCATACATGCTTCTTTATGCAAGGCACTCTCCAAAACCCCTGGGTTCAGTAAGTAGCAATGCAACCTTTTCAACTGGAAAGTTCAAGAGGAGAAGCTTAGAAGCCATTCCTGCTGTTTCTAAGACGCGGTTGAATTCCATGGCTACAAATGCTGATTCTCCCTCCGTACAGCAGAAGCAGGGACAGCATTCTCACCGGAATGCCGTTGATGATCCCTTTAGCAATGAATCTGTATACCCAGAAGAATGGAGATTCAACTATCGGGGAAGAAATACTATGGTGGATTCTGCTAGCGAAAGCTCACTTTTCAGCTCTTCTGATGCAAGCTCTTGCAGTACTACAAGTACAAAGGACTCGGCTAGTACTGCTGACTTTTCAGATTACATTTTTGGTGAGGCAGGGTCCAATTGGCATGGCCAGTATGGAATTTCTTCCAACTCGGCTGCATCTTCTTCCTATGATACCTTGCATACAGATTTCTCAGTGGACAATGATGCTGATAGGAGGCTCCAGCAAGACTCGGAAGATAAAGCAATTTTGTATGCTAACAAAAACAAAAATCATAGTGGTAGATGGGGAATTGACCTTAAAAAATTTGTCACTGCTAAGCACCATGACAAAAGTTCTGCTGTACATGCGAGAAGAACAAGTAGAGATGCATCAGCTCAAACATTTTATTGA

Protein sequence

>Msa0762210

MAVFEILGFQGFVYLLLVLGFVVIRYVWRNAEEKREEVMRLVQDTTASMAHMEAYDDSDEISFSASNSASFESLNAVPVSVSHGYQCAVCYSPTTMRCARCKAVRYCSGKCQISHWRQGHKDECCPSITTTREVNDENVTSRASVSGTEFGLHESKGNHVNVGSYNDSHSSINASVAARESFDDNRHETHDSFTKPVSDNTANDTCVASTDNDGTVLHSSFPLESKNPVNIEVKNSSSSKRSKKKSSNTTDETGFESKVPKAKSDTYHDEASKLGGHQHKRRVSFVEKPITDTSKCRTVPSLSNSNTDVLADDVEESHLSRYKEARRSSSSSSRDQMSSTTKEDLISHSKSTKTDNYHALPSKVSVVPNLQQNVRNGQKRGWCFMCEFEYLIQKAKEGTSPLSPIGILSKIHKIGSHLGHGREEDAHEFLRGAVETMQYICLKEAGVSSPLTEETTLIGYTFGGYLRSKIKCLRCLGKSERYERMMDLTVEIDGDIETLEEALGQFTAPEILDKDNKYNCGRLLLVPRSLRCAAGQWLAAGEASCAPHQEWERYTRLLSGNGAVQFAPIAAHKGRSGRGDEKVDKRNNFSPFMAKSEFSGNKYLSFVTRSARSVRLLVVCGCYAVCKSYEKAKKKLTILEAPNILTIVLKRFQSGNFEKLNKSVQFPEVLDMTPYMSGRKDKSPFYSLYAVVVHLDIMNASFSGHYVCYVKNIQGEWFRTDDSRVEPVELSRVLSESAYMLLYARHSPKPLGSVSSNATFSTGKFKRRSLEAIPAVSKTRLNSMATNADSPSVQQKQGQHSHRNAVDDPFSNESVYPEEWRFNYRGRNTMVDSASESSLFSSSDASSCSTTSTKDSASTADFSDYIFGEAGSNWHGQYGISSNSAASSSYDTLHTDFSVDNDADRRLQQDSEDKAILYANKNKNHSGRWGIDLKKFVTAKHHDKSSAVHARRTSRDASAQTFY*